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25 pages, 4275 KB  
Article
Deciphering the Mechanisms Underlying Enhanced Drought Tolerance in Autotetraploid Apple ‘Redchief’: Physiological, Biochemical, Molecular, and Anatomical Insights
by Monika Działkowska, Danuta Wójcik, Krzysztof Klamkowski, Agnieszka Marasek-Ciołakowska and Małgorzata Podwyszyńska
Agronomy 2026, 16(2), 139; https://doi.org/10.3390/agronomy16020139 - 6 Jan 2026
Viewed by 185
Abstract
It is generally believed that plant polyploids exhibit greater tolerance to abiotic stress conditions than their diploid counterparts. The aim of the present research was to investigate the mechanisms underlying enhanced drought tolerance in the autotetraploid apple ‘Redchief’ as compared to its diploid [...] Read more.
It is generally believed that plant polyploids exhibit greater tolerance to abiotic stress conditions than their diploid counterparts. The aim of the present research was to investigate the mechanisms underlying enhanced drought tolerance in the autotetraploid apple ‘Redchief’ as compared to its diploid counterpart. The study was conducted on potted plants over two growing seasons, and simulated drought conditions were induced by limiting or withholding irrigation. Under drought stress, the responses of the clone ‘Redchief’ 4x-25 and its diploid counterpart were compared at physiological, biochemical, and molecular levels. In addition, changes in leaf anatomical structure, stomatal characteristics, and parameters related to growth dynamics were examined in drought-challenged plants. The results indicate that apple tetraploids have a greater ability to adapt to water-deficit conditions than diploids. Under drought stress, apple tetraploids exhibited better physiological and biochemical parameters and maintained a greater capacity for continued growth than diploids. We propose that the primary mechanism underlying the increased drought tolerance in apple tetraploids is a faster and more efficient activation of antioxidant defenses and proline accumulation compared to diploids. The high plasticity of anatomical traits in apple tetraploids in response to adverse environmental conditions was also demonstrated. Full article
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19 pages, 2218 KB  
Article
Analyzing the Specificity of KAWLR Genetic Resources in Afghan Landrace Wheat for Ca-Rich High pH Soil Tolerance Using Proteomics
by Emdadul Haque, Farid Niazi, Xiaojian Yin, Yuso Kobara, Setsuko Komatsu and Tomohiro Ban
Int. J. Mol. Sci. 2026, 27(1), 239; https://doi.org/10.3390/ijms27010239 - 25 Dec 2025
Viewed by 179
Abstract
Breeding wheat varieties that are resilient to arid climates, which impart a complex combination of stresses, including excessive Ca, high pH, nutrient deficiency, and aridity, is important. Afghan landrace wheat is assumed to have evolved with a specific prototypical pattern of traits to [...] Read more.
Breeding wheat varieties that are resilient to arid climates, which impart a complex combination of stresses, including excessive Ca, high pH, nutrient deficiency, and aridity, is important. Afghan landrace wheat is assumed to have evolved with a specific prototypical pattern of traits to adapt to its challenging, composite stress environment. Here, a useful semi-hydroponic double cup screen aiding proteomic analysis was exploited to reconstruct the combined excessive Ca2+ (100 ppm) and extreme pH (11.0) of the soils and to dissect specific morpho-physiological characteristics and adaptation strategies in Kihara Afghan wheat landrace (KAWLR). When compared to other cultivars and growth habits, several winter-type KAWLR showed lower unused N-K-P and greater rhizosphere pH stability in the bottom cup and higher tolerance in terms of greater root allocation shift, and most of their above ground traits (shoot biomass, chlorophyll content, and stomatal conductance) were strongly correlated with root length and biomass under stress conditions. Quantitative proteomics on the roots of a tolerant winter-type KAWLR, Herat-740 (KU-7449), showed a strong decreasing trend in changed proteins (12 increased/816 decreased). The proteins (such as mitochondrial phosphate carrier protein, cytoskeleton-related α-, and β-tubulin) that increased in abundance were associated with energy transport and cell growth. A metabolism overview revealed that most proteins that were mapped to glycolysis, fermentation, and the TCA cycle decreased in abundance. However, proteins related to cell wall and lipid metabolism pathways remained unchanged. Our results suggest that winter-type KAWLR adopts a homeostatic stress adaptation strategy that globally downshifts metabolic activity, while selectively maintaining root growth machinery. Root allocation shift, rhizosphere pH stabilization (nutrient solubilization), and a selective proteome response maintaining the root growth machinery in winter-type KAWLR could be breeding selection markers for early-stage screening in calcareous-alkaline arid land. Full article
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18 pages, 1994 KB  
Article
Nitrogen–Calcium Stoichiometry Regulates Growth and Physiology in Mongolian Pine (Pinus sylvestris var. mongolica)
by Shenglan Huang, Hui Li, Yan Huo, Xiaohang Weng and Hongbo Wang
Forests 2025, 16(12), 1809; https://doi.org/10.3390/f16121809 - 2 Dec 2025
Viewed by 235
Abstract
Nitrogen and calcium are the key elements required for plant growth. Variations in calcium concentration will affect nitrogen absorption in plants, regulate photosynthetic processes, and participate in the absorption and transport of photosynthetic products. The changes of nitrogen and calcium nutrients is conducive [...] Read more.
Nitrogen and calcium are the key elements required for plant growth. Variations in calcium concentration will affect nitrogen absorption in plants, regulate photosynthetic processes, and participate in the absorption and transport of photosynthetic products. The changes of nitrogen and calcium nutrients is conducive to alleviating the decline and mortality of Mongolian pine forests, thus contributing to the preservation of regional ecological security. In this study, an investigation was conducted into the effects of seven nitrogen-to-calcium (N-Ca) ratios (1:8, 1:4, 1:2, 1:1, 2:1, 4:1, and 8:1) on the growth and physiology of Mongolian pine seedlings through pot experiments. The results of the one-way analysis of variance indicated that variations in the N-Ca ratio could significantly affect processes such as plant height, basal diameter, biomass accumulation, and photosynthesis in Mongolian pine seedlings. A low N-Ca ratio caused calcium toxicity, resulting in reduced stomatal conductance (Ci) and a lower net photosynthetic rate (Tr). Conversely, a high N-Ca ratio led to nitrogen toxicity, decreased antioxidant enzyme activity, and adversely affected the accumulation of photosynthetic pigments and photosynthetic products. At an N-Ca ratio of 2:1, Mongolian pine seedlings not only exhibited maximized biomass and photosynthetic capacity but also demonstrated significantly elevated levels of antioxidant enzymes and content of soluble substances. In conclusion, an optimal N-Ca ratio of 2:1 existed for Mongolian pine seedlings, which significantly improved their growth and physiological characteristics. Full article
(This article belongs to the Section Forest Soil)
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13 pages, 1797 KB  
Article
Analysis of the Leaf Structure and Physiological Response of Two Peach Genotypes in Relation to Powdery Mildew Resistance
by Ju Yu, Yong Li, Ze Yuan, Lirong Wang and Cuiyun Wu
Horticulturae 2025, 11(12), 1457; https://doi.org/10.3390/horticulturae11121457 - 2 Dec 2025
Viewed by 406
Abstract
Powdery mildew is one of the major diseases of peach. To clarify the relationships between peach powdery mildew resistance and leaf structure and defensive enzyme activities, this study used the resistant genotype ‘Zhou Xing Shan Tao’ (Prunus davidiana) and the susceptible [...] Read more.
Powdery mildew is one of the major diseases of peach. To clarify the relationships between peach powdery mildew resistance and leaf structure and defensive enzyme activities, this study used the resistant genotype ‘Zhou Xing Shan Tao’ (Prunus davidiana) and the susceptible genotype ‘Shache Lürou No.3’ (Prunus ferganensis) as a control. Resistance was evaluated through artificial inoculation with powdery mildew conidia (Podosphaera tridactyla). Key indicators including leaf wax content, stomatal characteristics, leaf transverse structure, and the activities of three defense enzymes were assessed and the relationship between these traits and resistance was analyzed. The results showed that ‘Zhou Xing Shan Tao’ exhibited stronger resistance to powdery mildew than ‘Shache Lürou No.3’. ‘Zhou Xing Shan Tao’ leaves exhibited a significantly higher (p < 0.01) wax content and a significantly lower stomatal density relative to ‘Shache Lürou No.3’. However, the size of individual stomata (long diameter, short diameter, circumference, area) did not differ significantly between the two genotypes. Microstructurally, ‘Zhou Xing Shan Tao’ leaves had significantly greater fenestrated tissue, lower epidermis, palisade cell layers, and overall leaf thickness. Its leaf tissue structure was also significantly more compact, with a higher compactness-to-openness ratio, and significantly less cellular laxity than ‘Shache Lürou No.3’. Following inoculation with powdery mildew, ‘Zhou Xing Shan Tao’ leaves accumulated hydrogen peroxide (H2O2) and malondialdehyde (MDA) more rapidly and to a greater extent. The activities of the superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) defense enzymes also increased faster and were significantly higher than in ‘Shache Lürou No.3’. In conclusion, leaf structural traits such as wax content and stomatal density combined with pathogenicity assessments serve as effective phenotypic indicators for evaluating powdery mildew resistance in Prunus species. Full article
(This article belongs to the Section Plant Pathology and Disease Management (PPDM))
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20 pages, 7355 KB  
Article
Integrating Chlorophyll Fluorescence with Anatomical and Physiological Analyses Reveals Interspecific Variation in Heat Tolerance Among Eight Rhododendron Taxa
by Wenfang Guo, Jiaxin Wei, Hao Yu, Yurui Wang, Jingli Zhang and Shusheng Wang
Plants 2025, 14(23), 3664; https://doi.org/10.3390/plants14233664 - 1 Dec 2025
Viewed by 392
Abstract
To investigate interspecific variation in heat tolerance and underlying adaptation mechanisms in Rhododendron, three-year-old potted seedlings of eight taxa, representing four subgenera within the genus Rhododendron, were subjected to 40 °C high-temperature stress. Heat tolerance was comprehensively assessed using phenotypic observation, [...] Read more.
To investigate interspecific variation in heat tolerance and underlying adaptation mechanisms in Rhododendron, three-year-old potted seedlings of eight taxa, representing four subgenera within the genus Rhododendron, were subjected to 40 °C high-temperature stress. Heat tolerance was comprehensively assessed using phenotypic observation, chlorophyll fluorescence imaging, microscopic examination, and physiological measurements. Results revealed that leaf damage in Rhododendron oldhamii and Rhododendron × pulchrum reached grade III, whereas Rhododendron latoucheae exhibited only grade II injury with rapid recovery. Chlorophyll fluorescence analysis showed a significant decrease in the maximum quantum efficiency of PSII (Fv/Fm) in R. liliiflorum and R. × pulchrum, followed by rapid recovery, while R. latoucheae maintained stable Fv/Fm values. Stomatal closure occurred in all taxa post-stress; stomatal characteristics of R. liliiflorum and R. simiarum remained stable, and leaf tissue structure was least affected in R. kiangsiense. R. × pulchrum demonstrated the most pronounced structural recovery. Physiologically, R. oldhamii exhibited the greatest increases in electrolyte leakage (EL) and malondialdehyde (MDA) content. R. simiarum accumulated the highest proline content under stress, while R. latoucheae showed the most significant proline reduction during recovery. By integrating multiple indicators through principal component analysis (PCA) and a membership function, and assigning weights based on variance contribution, the heat tolerance was comprehensively evaluated and ranked as follows: R. latoucheae > R. simiarum > R. oldhamii > R. ovatum > R. fortunei > R. liliiflorum > R. kiangsiense > R. × pulchrum. These findings demonstrate significant differences in heat tolerance among Rhododendron taxa at the subgenus level, with the subgenus Azaleastrum generally possessing stronger short-term heat tolerance compared to the subgenus Tsutsusi. This study provides a theoretical basis for heat-tolerant cultivar breeding and landscape application of Rhododendron. Full article
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13 pages, 2064 KB  
Article
Comparative Study on Photosynthetic Characteristics and Leaf Structure of Paphiopedilum parishii in Different Growth Periods
by Li Lu, Haiying Jiang, Xinru Cai, Xi Li, Guohua He, Shuo Feng, Xiao Wei and Jianmin Tang
Agronomy 2025, 15(12), 2713; https://doi.org/10.3390/agronomy15122713 - 25 Nov 2025
Viewed by 338
Abstract
This study investigates the differences in photosynthetic characteristics of Paphiopedilum parishii (Rchb.f.) Stein during its reproductive and nutrient growth periods. Using plants from the same individual, we compared light response curves, chlorophyll content, leaf epidermal structure, and leaf anatomical structure between these two [...] Read more.
This study investigates the differences in photosynthetic characteristics of Paphiopedilum parishii (Rchb.f.) Stein during its reproductive and nutrient growth periods. Using plants from the same individual, we compared light response curves, chlorophyll content, leaf epidermal structure, and leaf anatomical structure between these two growth stages. The results show the following: (1) The overall shape of the light response curves was similar across both periods, but plants in the nutrient growth period exhibited higher net photosynthetic rates (Pn) at all light intensities compared to those in the reproductive growth period. (2) During the nutrient growth period, apparent quantum efficiency (AQY), maximum net photosynthetic rate (Pmax), and light saturation point (LSP) were all significantly higher than in the reproductive growth period, while the light compensation point (LCP) and dark respiration rate (Rd) showed no significant differences. (3) Structurally, during the nutrient growth period, stomatal density significantly increased, while stomatal area decreased. Additionally, leaf thickness and mesophyll tissue thickness both markedly increased, indicating enhanced carbon assimilation efficiency through improved CO2 uptake capacity and expanded photosynthetic area. (4) Significant differences in leaf anatomical structure between the two periods were primarily observed in leaf thickness and mesophyll tissue thickness, providing more space for energy accumulation during the post-flowering recovery phase. This study systematically reveals the dynamic changes in photosynthetic physiology and structural characteristics of P. parishii across different phenological stages, offering a theoretical foundation for its reintroduction and cultivation management. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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35 pages, 1436 KB  
Review
Vesicular Stomatitis Virus-Based Oncolytic Virotherapy: Recent Progress and Emerging Trends
by Cassandra Catacalos-Goad, Charlotte Johnstone and Valery Z. Grdzelishvili
Curr. Oncol. 2025, 32(11), 627; https://doi.org/10.3390/curroncol32110627 - 7 Nov 2025
Viewed by 1357
Abstract
Oncolytic virotherapy has emerged as a promising and innovative approach to cancer treatment, leveraging viruses that selectively replicate in tumor cells and cause their destruction (oncolysis), while simultaneously stimulating anti-tumor immune responses. Vesicular stomatitis virus (VSV), a prototypic rhabdovirus, is among the most [...] Read more.
Oncolytic virotherapy has emerged as a promising and innovative approach to cancer treatment, leveraging viruses that selectively replicate in tumor cells and cause their destruction (oncolysis), while simultaneously stimulating anti-tumor immune responses. Vesicular stomatitis virus (VSV), a prototypic rhabdovirus, is among the most versatile oncolytic virus platforms due to its favorable biological characteristics, including rapid replication and cell lysis, lack of pre-existing immunity in humans, and amenability to genetic engineering. Over the past decade, significant progress has been made in VSV-based oncolytic virotherapy. This review presents a comprehensive update on developments since our last review, emphasizing improvements in VSV safety, oncoselectivity, tumor-specific replication, direct oncolysis, and induction of antitumor immunity. By integrating recent applied discoveries with foundational knowledge, this review aims to guide ongoing efforts to advance VSV-based oncolytic virotherapy toward broader clinical translation and improved cancer patient outcomes. Additionally, we provide an overview of three closely related rhabdoviruses (Maraba, Morreton, and Jurona viruses) as emerging oncolytic platforms currently under preclinical and clinical investigation. Full article
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16 pages, 2273 KB  
Article
Can Environmental Conditions Alter the Physiological and Photochemical Plasticity of Cacti (Opuntia and Nopalea) in Semiarid Environments?
by Lady Daiane Costa de Sousa Martins, Alexandre Maniçoba da Rosa Ferraz Jardim, Luciana Sandra Bastos de Souza, Lara Rosa de Lima e Silva, Wagner Martins dos Santos, Márcia Bruna Marim de Moura, Wilma Roberta dos Santos, Adriano Nascimento Simões, Sérgio Luiz Ferreira-Silva, Hugo Rafael Bentzen Santos, João L. M. P. de Lima and Thieres George Freire da Silva
Environments 2025, 12(11), 418; https://doi.org/10.3390/environments12110418 - 4 Nov 2025
Viewed by 873
Abstract
Cacti of the genera Opuntia and Nopalea exhibit morphophysiological and biochemical characteristics that favor their adaptation to semiarid environments, such as crassulacean acid metabolism (CAM) and cladode succulence. These strategies reduce water loss and allow the maintenance of photosynthesis under stress conditions. In [...] Read more.
Cacti of the genera Opuntia and Nopalea exhibit morphophysiological and biochemical characteristics that favor their adaptation to semiarid environments, such as crassulacean acid metabolism (CAM) and cladode succulence. These strategies reduce water loss and allow the maintenance of photosynthesis under stress conditions. In this study, we evaluated the seasonal variation in the physiological and photochemical responses of forage cactus clones grown in semiarid environments, considering the rainy, dry, and transition seasons. The net photosynthetic rate (Pn) and chlorophyll fluorescence parameters varied significantly as a function of water availability and microclimatic conditions. We found higher CO2 assimilation rates during the rainy season, while the dry season resulted in a strong impairment of photosynthetic activity, with reductions of 65% in stomatal conductance, 37% in transpiration, 20% in maximum quantum efficiency of photosystem II, and 19% in the electron transport rate. Furthermore, during these periods, we observed an increase in initial fluorescence and non-photochemical dissipation, demonstrating the activation of photoprotective mechanisms against excess light energy. During the transition seasons, the cacti exhibited rapid adjustments in gas exchange and energy dissipation, indicating the adaptive plasticity of CAM pathway. The MIU (Nopalea cochenillifera (L.) Salm-Dyck), OEM (Opuntia stricta (Haw.) Haw.), and IPA (Nopalea cochenillifera (L.) Salm-Dyck) clones demonstrated greater resilience, maintaining greater stability in Pn, instantaneous water use efficiency, and photochemical parameters during the drought. In contrast, the OEA (Opuntia undulata Griffiths) clone showed high sensitivity to water and heat stress, with marked reductions in physiological and photochemical performance. In summary, the photosynthetic efficiency and chlorophyll fluorescence of CAM plants result from the interaction between water availability, air temperature, radiation, and genotypic traits. This study provides a new scientific basis for exploring the effects of environmental conditions on the carbon and biochemical metabolism of cacti grown in a semiarid environment. Full article
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22 pages, 3835 KB  
Article
Planting Date and Cultivar Selection Effects on Cauliflower Growth, Physiology, and Yield Performance in North Dakota Growing Conditions
by Ajay Dhukuchhu, Ozkan Kaya and Harlene Hatterman-Valenti
Horticulturae 2025, 11(11), 1314; https://doi.org/10.3390/horticulturae11111314 - 1 Nov 2025
Viewed by 796
Abstract
Investigating the optimal planting strategies for brassica vegetables under variable climatic conditions is essential for developing sustainable production systems in northern agricultural regions. However, comprehensive knowledge about how planting timing modulates growth, physiological responses, and yield parameters across different cultivars remains limited. We [...] Read more.
Investigating the optimal planting strategies for brassica vegetables under variable climatic conditions is essential for developing sustainable production systems in northern agricultural regions. However, comprehensive knowledge about how planting timing modulates growth, physiological responses, and yield parameters across different cultivars remains limited. We investigated vegetative development, root morphology, physiological efficiency, and marketable yield in six cauliflower cultivars (‘Amazing’, ‘Cheddar’, ‘Clementine’, ‘Flame Star’, ‘Snow Crown’, and ‘Vitaverde’) subjected to four planting dates (May 1, May 15, June 1, and June 15) across two growing seasons (2023–2024), followed by detailed morphological and physiological profiling. Planting date, cultivar selection, and seasonal variation significantly influenced all measured parameters (p < 0.001), with notable interaction effects observed for fresh root weight, stomatal conductance, water use efficiency, and yield components. Early planted cultivars consistently demonstrated superior performance under variable environmental conditions, maintaining higher growth rates, enhanced root development, and improved physiological efficiency, particularly ‘Flame Star’, ‘Snow Crown’, and ‘Cheddar’, compared to late-planted treatments. Recovery of optimal plant development was most pronounced at May planting dates, with early-established crops showing better maintenance of vegetative growth patterns and enhanced yield potential, including higher curd weights (585.7 g for ‘Flame Star’) and superior marketable grades. Morphological profiling revealed distinct clustering patterns, with early-planted cultivars forming separate groups characterized by elevated root biomass, enhanced physiological parameters, and superior yield characteristics. In contrast, late-planted crops showed reduced performance, indicative of environmental stress responses. We conclude that strategic early planting significantly enhances cauliflower production resilience through comprehensive optimization of growth, physiological, and yield parameters, particularly under May establishment conditions. The differential performance responses between planting dates provide insights for timing-based management strategies, while the quantitative morphological and physiological profiles offer valuable parameters for assessing crop adaptation and commercial viability potential under variable climatic scenarios in northern agricultural systems. Full article
(This article belongs to the Special Issue Advances in Sustainable Cultivation of Horticultural Crops)
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14 pages, 1927 KB  
Article
Comparative Study on Leaf Functional Traits and Environmental Adaptability of Seedlings of the Endangered Plants Ormosia olivacea, Ormosia pachycarpa, and Ormosia sericeolucida
by Juntong Yan, Guohua He, Xi Li, Shuo Feng, Yingying Wu, Rong Zou and Jianmin Tang
Agronomy 2025, 15(11), 2512; https://doi.org/10.3390/agronomy15112512 - 29 Oct 2025
Viewed by 529
Abstract
To investigate the photosynthetic characteristics and leaf anatomical structures of seedlings from the endangered plants Ormosia olivacea, Ormosia pachycarpa, and Ormosia sericeolucida, this study aimed to elucidate the influence of leaf structure on photosynthetic traits and light requirements among these [...] Read more.
To investigate the photosynthetic characteristics and leaf anatomical structures of seedlings from the endangered plants Ormosia olivacea, Ormosia pachycarpa, and Ormosia sericeolucida, this study aimed to elucidate the influence of leaf structure on photosynthetic traits and light requirements among these three Ormosia species, thereby providing reference for their introduction and cultivation. This study measured the light response curves, CO2 response curves, leaf epidermal and anatomical characteristics, and photosynthetic pigment content of the three Ormosia species. Results indicate: 1. All three species exhibit photophilic tendencies, with Ormosia olivacea demonstrating the highest photosynthetic capacity, achieving a maximum net photosynthetic rate (Pmax) of 1.9062 mol m−2 s−1. Ormosia pachycarpa exhibited the highest potential maximum net photosynthetic rate (Amax), demonstrating superior CO2 utilisation capacity. The Amax values for all three species were significantly higher than their Pmax values. 2. Among the three Ormosia species, Ormosia sericeolucida exhibited the thickest leaf structure, with palisade tissue thickness ordered as follows: Ormosia sericeolucida > Ormosia pachycarpa > Ormosia olivacea. 3. Stomata were present on the lower epidermis of all three species. Ormosia sericeolucida possessed the largest individual stomatal area, while Ormosia olivacea exhibited the highest stomatal density. 4. The chlorophyll a content (Chl a) of all three Ormosia species exceeded their chlorophyll b content (Chl b), indicating they are photophilic plants. Ormosia sericeolucida exhibited higher chlorophyll a (Chl a), chlorophyll b (Chl b), and total chlorophyll (Chl) contents than both Ormosia olivacea and Ormosia pachycarpa. Ormosia olivacea possessed the highest carotenoid content (Car). In summary, Ormosia pachycarpa exhibited the highest potential maximum net photosynthetic rate (Amax), demonstrating the strongest CO2 utilisation capacity, followed by Ormosia olivacea, with Ormosia sericeolucida showing the lowest. Appropriately increasing CO2 levels in cultivation sites would benefit photosynthesis and material accumulation in all three Ormosia species, promoting robust growth. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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25 pages, 5442 KB  
Article
Physiological, Biochemical and Gene Expression Analyses of Halimodendron halodendron Responding to Drought Stress
by Huanqiong Hu, Panpan Zhang, Ling Wang, Hailian Liang, Jiye Liang and Ruiheng Lyu
Genes 2025, 16(11), 1274; https://doi.org/10.3390/genes16111274 - 28 Oct 2025
Viewed by 464
Abstract
Background: As a typical xerophyte, H. halodendron can not only grow in desert sandy areas but also serves as an excellent nectar source and ornamental plant. However, research on its molecular and physiological mechanisms underlying drought tolerance remains limited. Methods: This study [...] Read more.
Background: As a typical xerophyte, H. halodendron can not only grow in desert sandy areas but also serves as an excellent nectar source and ornamental plant. However, research on its molecular and physiological mechanisms underlying drought tolerance remains limited. Methods: This study systematically investigated its drought resistance characteristics by integrating physiological parameters and Illumina transcriptome sequencing, and further validated key genes involved in the drought resistance mechanisms. Results: A total of 46,305 functional genes were identified, among which 6561 were differentially expressed genes (DEGs). These DEGs were significantly enriched in chloroplast function, photosynthesis, proline biosynthesis, and peroxidase activity. Under drought stress, the net photosynthetic rate, stomatal conductance, chlorophyll content, and transpiration rate decreased. Under severe drought conditions, only 5 out of 80 photosynthesis-related DEGs were up-regulated, while the rest were down-regulated, indicating that reduced chlorophyll content impaired light absorption, carbon reactions, and photosynthetic efficiency. Additionally, the contents of proline, soluble sugars, and soluble proteins, as well as the activities of superoxide dismutase (SOD), catalase (CAT), and peroxidase (POD), increased. The identification of 35 osmotic regulation-related and 39 antioxidant enzyme-related DEGs suggests that H. halodendron enhances osmotic adjustment substance synthesis and reactive oxygen species (ROS) scavenging capacity to counteract osmotic stress. Conclusions: Physiological, biochemical and gene expression analyses under drought stress provide a basis for the study of the drought tolerance characteristics of H. halodendron, which is of great significance for ecological environment governance using H. halodendron. Full article
(This article belongs to the Section Plant Genetics and Genomics)
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11 pages, 1228 KB  
Article
The Photosynthetic Characteristics of Leaves in Different-Colored Brassica juncea
by Gang Yang, Jiquan Zhang, Abbas Muhammad Fahim, Yuanyuan Zhang, Wancang Sun, Li Ma, Yuanyuan Pu, Lijun Liu, Wangtian Wang, Tingting Fan and Junyan Wu
Plants 2025, 14(20), 3197; https://doi.org/10.3390/plants14203197 - 17 Oct 2025
Viewed by 994
Abstract
Leaf color is a key trait influencing photosynthetic efficiency in plants. This study investigates the photosynthetic characteristics of differently colored leaves in Brassica juncea L. using green-leaved (SWJ) and purple-red-leaved (RLJ) varieties, their reciprocal F1 hybrids, and F2 populations. The results [...] Read more.
Leaf color is a key trait influencing photosynthetic efficiency in plants. This study investigates the photosynthetic characteristics of differently colored leaves in Brassica juncea L. using green-leaved (SWJ) and purple-red-leaved (RLJ) varieties, their reciprocal F1 hybrids, and F2 populations. The results show that the net photosynthetic rate and chlorophyll content of SWJ were significantly higher than those of RLJ, while F1 hybrids exhibited intermediate photosynthetic performance. All five measured photosynthetic traits—net photosynthetic rate, stomatal conductance, intercellular CO2 concentration, transpiration rate, and chlorophyll content—segregated significantly in the F2 generation and were identified as quantitative traits. Notably, transpiration rate was positively correlated with leaf color, whereas no correlation was found with net photosynthetic rate or intercellular CO2 concentration. A key finding is the occurrence of purple-leaved plants with high photosynthetic rates and green-leaved plants with low photosynthetic rates in the F2 generation, indicating the potential to combine high photosynthesis with anthocyanin-rich purple leaves. This study provides new genetic insights and a theoretical basis for breeding high-yield, stress-tolerant Brassica juncea varieties. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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19 pages, 1564 KB  
Article
Colchicine-Induced Tetraploid Kenaf (Hibiscus cannabinus L.) for Enhanced Fiber Production and Biomass: Morphological and Physiological Characterization
by Tao Chen, Xin Li, Dengjie Luo, Jiao Pan, Muzammal Rehman and Peng Chen
Agronomy 2025, 15(10), 2337; https://doi.org/10.3390/agronomy15102337 - 4 Oct 2025
Viewed by 865
Abstract
Polyploidization is a rapid breeding strategy for producing new varieties with superior agronomic traits. Kenaf (Hibiscus cannabinus L.), an important fiber crop, exhibits high adaptability to diverse stress conditions. However, comprehensive studies on polyploid induction, screening, and genetic identification in kenaf remain [...] Read more.
Polyploidization is a rapid breeding strategy for producing new varieties with superior agronomic traits. Kenaf (Hibiscus cannabinus L.), an important fiber crop, exhibits high adaptability to diverse stress conditions. However, comprehensive studies on polyploid induction, screening, and genetic identification in kenaf remain unreported. This study first established an optimal tetraploid induction system for diploid kenaf seeds using colchicine. The results showed that a 4-h treatment with 0.3% colchicine yielded the highest tetraploid induction rate of 37.59%. Compared with diploids, tetraploid plants displayed distinct phenotypic and physiological characteristics: dwarfism with shortened internodal distance, increased stem thickness, larger and thicker leaves with deeper green color and serration, as well as enlarged flowers, capsules, and seeds. Physiologically, tetraploid leaves featured increased chloroplast numbers in guard cells, reduced stomatal density, and larger pollen grains, elevated chlorophyll content. Further analyses revealed that tetraploid kenaf had elevated contents of various trace elements, enhanced photosynthetic efficiency, prolonged growth duration, and superior agronomic traits with higher biomass (54.54% higher fresh weight, 79.17% higher dry weight). These findings confirm the effectiveness of colchicine-induced polyploidization in kenaf, and the obtained tetraploid germplasm provides valuable resources for accelerating the breeding of elite kenaf varieties with improved yield and quality. Full article
(This article belongs to the Section Horticultural and Floricultural Crops)
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22 pages, 8042 KB  
Article
WSF: A Transformer-Based Framework for Microphenotyping and Genetic Analyzing of Wheat Stomatal Traits
by Honghao Zhou, Haijiang Min, Shaowei Liang, Bingxi Qin, Qi Sun, Zijun Pei, Qiuxiao Pan, Xiao Wang, Jian Cai, Qin Zhou, Yingxin Zhong, Mei Huang, Dong Jiang, Jiawei Chen and Qing Li
Plants 2025, 14(19), 3016; https://doi.org/10.3390/plants14193016 - 29 Sep 2025
Viewed by 731
Abstract
Stomata on the leaves of wheat serve as important gateways for gas exchange with the external environment. Their morphological characteristics, such as size and density, are closely related to physiological processes like photosynthesis and transpiration. However, due to the limitations of existing analysis [...] Read more.
Stomata on the leaves of wheat serve as important gateways for gas exchange with the external environment. Their morphological characteristics, such as size and density, are closely related to physiological processes like photosynthesis and transpiration. However, due to the limitations of existing analysis methods, the efficiency of analyzing and mining stomatal phenotypes and their associated genes still requires improvement. To enhance the accuracy and efficiency of stomatal phenotype traits analysis and to uncover the related key genes, this study selected 210 wheat varieties. A novel semantic segmentation model based on transformer for wheat stomata, called Wheat Stoma Former (WSF), was proposed. This model enables fully automated and highly efficient stomatal mask extraction and accurately analyzes phenotypic traits such as the length, width, area, and number of stomata on both the adaxial (Ad) and abaxial (Ab) surfaces of wheat leaves based on the mask images. The model evaluation results indicate that coefficients of determination (R2) between the predicted values and the actual measurements for stomatal length, width, area, and number were 0.88, 0.86, 0.81, and 0.93, respectively, demonstrating the model’s high precision and effectiveness in stomatal phenotypic trait analysis. The phenotypic data were combined with sequencing data from the wheat 660 K SNP chip and subjected to a genome-wide association study (GWAS) to analyze the genetic basis of stomatal traits, including length, width, and number, on both adaxial and abaxial surfaces. A total of 36 SNP peak loci significantly associated with stomatal traits were identified. Through candidate gene identification and functional analysis, two genes—TraesCS2B02G178000 (on chromosome 2B, related to stomatal number on the abaxial surface) and TraesCS6A02G290600 (on chromosome 6A, related to stomatal length on the adaxial surface)—were found to be associated with stomatal traits involved in regulating stomatal movement and closure, respectively. In conclusion, our WSF model demonstrates valuable advances in accurate and efficient stomatal phenotyping for locating genes related to stomatal traits in wheat and provides breeders with accurate phenotypic data for the selection and breeding of water-efficient wheat varieties. Full article
(This article belongs to the Special Issue Machine Learning for Plant Phenotyping in Crops)
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Article
Stoma Detection in Soybean Leaves and Rust Resistance Analysis
by Jiarui Feng, Shichao Wu, Rong Mu, Huanliang Xu, Zhaoyu Zhai and Bin Hu
Plants 2025, 14(19), 2994; https://doi.org/10.3390/plants14192994 - 27 Sep 2025
Viewed by 785
Abstract
Stomata play a crucial role in plant immune responses, with their morphological characteristics closely linked to disease resistance. Accurate detection and analysis of stomatal phenotypic parameters are essential for soybean disease resistance research and variety breeding. However, traditional stoma detection methods are challenged [...] Read more.
Stomata play a crucial role in plant immune responses, with their morphological characteristics closely linked to disease resistance. Accurate detection and analysis of stomatal phenotypic parameters are essential for soybean disease resistance research and variety breeding. However, traditional stoma detection methods are challenged by complex backgrounds and leaf vein structures in soybean images. To address these issues, we proposed a Soybean Stoma-YOLO (You Only Look Once) model (SS-YOLO) by incorporating large separable kernel attention (LSKA) in the Spatial Pyramid Pooling-Fast (SPPF) module of YOLOv8 and Deformable Large Kernel Attention (DLKA) in the Neck part. These architectural modifications enhanced YOLOV8′s ability to extract multi-scale and irregular stomatal features, thus improving detection accuracy. Experimental results showed that SS-YOLO achieved a detection accuracy of 98.7%. SS-YOLO can effectively extract the stomatal features (e.g., length, width, area, and orientation) and calculate related indices (e.g., density, area ratio, variance, and distribution). Across different soybean rust disease stages, the variety Dandou21 (DD21) exhibited less variation in length, width, area, and orientation compared with Fudou9 (FD9) and Huaixian5 (HX5). Furthermore, DD21 demonstrated greater uniformity in stomatal distribution (SEve: 1.02–1.08) and a stable stomatal area ratio (0.06–0.09). The analysis results indicate that DD21 maintained stable stomatal morphology with rust disease resistance. This study demonstrates that SS-YOLO significantly improved stoma detection and provided valuable insights into the relationship between stomatal characteristics and soybean disease resistance, offering a novel approach for breeding and plant disease resistance research. Full article
(This article belongs to the Section Plant Modeling)
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