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Search Results (272)

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Keywords = steady-state fluorescence

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18 pages, 2264 KB  
Article
Unveiling the Bio-Interface via Spectroscopic and Computational Studies of (Propyl-3-ol/butyl-4-ol)triphenyltin(IV) Compound Binding to Human Serum Transferrin
by Žiko Milanović, Emina Mrkalić, Jovan Kulić and Goran N. Kaluđerović
Materials 2026, 19(3), 457; https://doi.org/10.3390/ma19030457 - 23 Jan 2026
Viewed by 266
Abstract
Two structurally tunable (propyl-3-ol)triphenyltin(IV) (Ph3SnL1) and (butyl-4-ol)triphenyltin(IV) (Ph3SnL2) compounds were investigated at the human serum transferrin (Tf) molecular interface to resolve how ligand architecture and protein metallation modulate organotin(IV) biocompound stability [...] Read more.
Two structurally tunable (propyl-3-ol)triphenyltin(IV) (Ph3SnL1) and (butyl-4-ol)triphenyltin(IV) (Ph3SnL2) compounds were investigated at the human serum transferrin (Tf) molecular interface to resolve how ligand architecture and protein metallation modulate organotin(IV) biocompound stability and lobe-selective binding. Steady-state fluorescence spectroscopy revealed efficient quenching of native Tf emission (λex = 280 nm, 296–310 K, pH 7.4) without significant spectral displacement, indicating the predominant formation of non-fluorescent ground-state complexes. Calculated bimolecular quenching constants (Kq ~1012 M−1 s−1) exceeded the diffusion-controlled aqueous limit, ruling out a collisional dynamic quenching mechanism and confirming static complexation as the principal origin of fluorescence suppression. Double-log binding analysis revealed moderate affinity (Ka ~102–103 M−1) and an approximately single dominant binding event per protein (n ≈ 0.65–0.90). Temperature-dependent van’t Hoff evaluation yielded positive ΔH° and ΔS° values, supporting a spontaneous, entropy-favored association process largely governed by hydrophobic and dispersion-type contributions, consistent with lipophilic organotin(IV) scaffold accommodation. Iron (Fe3+) loading of Tf markedly enhanced ligand engagement, especially for Ph3SnL1, evidencing that metallation-induced lobe closure reshapes pocket accessibility and local polarity relevant for organotin(IV) binding presentation rather than simply strengthening empirical docking scores. Molecular docking localized the most stable Ph3SnL2 poses in the sterically confined, rigid C-lobe, while Ph3SnL1 preferentially penetrated the more adaptive N-lobe. ONIOM QM/MM refinement of docking poses confirmed strong interfacial stabilization (ΔEint ≈ –38 to –62 kcal mol−1) and clarified charge–packing interplay without invoking frontier orbital analysis. The results map multiscale structure–interaction relationships defining lobe preference and complex stability at the transferrin interface. Full article
(This article belongs to the Section Biomaterials)
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11 pages, 1187 KB  
Article
Room-Temperature Phosphorescence of Quinine Sulfate in PVA Films: The Effect of Humidity
by Agnieszka Jablonska, Bong Lee, R. Max Petty, Danh Pham, Rajveer Sagoo, Trang Thien Pham, Zygmunt Gryczynski and Ignacy Gryczynski
Optics 2026, 7(1), 7; https://doi.org/10.3390/opt7010007 - 14 Jan 2026
Viewed by 192
Abstract
We report the first observation of room-temperature phosphorescence (RTP) of quinine sulfate (QS) in poly (vinyl alcohol) (PVA) films. Steady-state and time-gated measurements were performed to characterize the phosphorescence spectra, anisotropies, and lifetimes to estimate the phosphorescence properties. The RTP response of organic [...] Read more.
We report the first observation of room-temperature phosphorescence (RTP) of quinine sulfate (QS) in poly (vinyl alcohol) (PVA) films. Steady-state and time-gated measurements were performed to characterize the phosphorescence spectra, anisotropies, and lifetimes to estimate the phosphorescence properties. The RTP response of organic emitters in polymer matrices is particularly sensitive to ambient humidity and oxygen levels. Hence, to assess the environmental stability of the system, QS-doped PVA films were cast from a single batch and divided into paired specimens, one of which was encapsulated with a pressure-sensitive laminate, while the other one was left non-laminated. Over 14 days under ambient laboratory conditions, the absorbance and fluorescence of both films remained unchanged, whereas the exhibited phosphorescence diverged significantly. The unlaminated film exhibited a progressive loss of afterglow intensity, a noticeable red shift in the phosphorescence spectrum, and a pronounced shortening of the phosphorescence lifetime, while the laminated film retained its initial RTP intensity, spectral profile, and lifetime throughout the entire experiment. Full article
(This article belongs to the Special Issue Optoelectronic Thin Films)
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17 pages, 4176 KB  
Article
Solvent-Mediated Control of Twisted Intramolecular Charge Transfer in 7-(Diethylamino)coumarin-3-carboxylic Acid
by Xilin Bai, Jing Xiao, Bingqi Du, Duidui Liu, Yanzhuo Wang, Shujing Shi and Jing Ge
Molecules 2026, 31(1), 76; https://doi.org/10.3390/molecules31010076 - 24 Dec 2025
Viewed by 574
Abstract
Understanding the influence of solvent environments on the excited-state charge transfer process remains a fundamental question in molecular photophysics and photochemistry. While twisted intramolecular charge transfer (TICT) is crucial in determining fluorescence efficiency and photostability, the combined effects of solvent polarity and hydrogen [...] Read more.
Understanding the influence of solvent environments on the excited-state charge transfer process remains a fundamental question in molecular photophysics and photochemistry. While twisted intramolecular charge transfer (TICT) is crucial in determining fluorescence efficiency and photostability, the combined effects of solvent polarity and hydrogen bonding interactions are still elusive. Here, we employ steady-state and femtosecond transient absorption (fs-TA) spectroscopy with density functional theory (DFT) calculations to investigate the excited-state dynamics of 7-(diethylamino)coumarin-3-carboxylic acid (7-DCCA) in different solvents. Our findings reveal that in highly polar solvents with strong hydrogen-donating and hydrogen-accepting capabilities, 7-DCCA undergoes significant TICT formation, resulting in fluorescence quenching. Conversely, in environments with low polarity or weak hydrogen-bonding interactions, this transformation is largely suppressed. Quantitative correlation analysis utilizing the Kamlet–Taft and Catalán four-parameter models further elucidates the synergistic role of solvent polarity and specific hydrogen-bonding parameters in modulating the steady-state spectral behavior of 7-DCCA. This study provides microscopic insights into solvent–charge transfer interactions and establishes a general framework for enhancing the luminescence efficiency and structural robustness of organic optoelectronic materials through strategic solvent engineering. Full article
(This article belongs to the Section Physical Chemistry)
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19 pages, 4836 KB  
Article
Robust Functionality and Regulation of Selectively Expressed RNA as AAV Vectors and In Vitro Transcribed Molecules
by Frederik Rastfeld, Nils Hersch, Georg Dreissen, Hajaani Manoharan, Laura Wagner, Lukas Lövenich, Elke Barczak, Hildegard Büning, Rudolf Merkel and Bernd Hoffmann
Pharmaceutics 2025, 17(12), 1595; https://doi.org/10.3390/pharmaceutics17121595 - 10 Dec 2025
Viewed by 614
Abstract
Background/Objectives: Selectively expressible RNA (seRNA) molecules represent a promising new platform for the induction of cell type-specific protein expression. Based on the sense–antisense interaction of the seRNA antisense domain with target cell-specific RNA molecules, the partial degradation of the seRNA molecule induces the [...] Read more.
Background/Objectives: Selectively expressible RNA (seRNA) molecules represent a promising new platform for the induction of cell type-specific protein expression. Based on the sense–antisense interaction of the seRNA antisense domain with target cell-specific RNA molecules, the partial degradation of the seRNA molecule induces the activation of an internal ribosomal entry site to initiate translation. The selective expression of seRNA encoded proteins exclusively in target cells works both in vitro and in vivo but is associated with a lower expression intensity compared with classical mRNAs. Furthermore, seRNAs have so far been transfected into cells by plasmid-encoded seRNA expression systems, which is limiting their broad medical applicability. Here, we focus on the characterization of plasmid-based seRNA uptake and activation as well as on options to transfer the seRNA technology to additional vector systems to increase target cell-specific effector expression. Methods: seRNA constructs were generated as expression plasmids, AAV, DNA minicircles and IVT-RNA and delivered into different eukaryotic cell lines by transfection/transduction. Analyses were performed using fluorescence microscopy and, for quantitative analyses, flow cytometry. RNA stability and expression analyses were performed using qRT-PCR. Results: We show that seRNA-based plasmid systems are efficiently transfected into cells but that reduced RNA steady-state levels are present compared with control expression plasmids. This effect is most likely based on reduced transcription efficiency rather than seRNA stability. Furthermore, seRNA transcription from viral vectors or circular DNA significantly increased the effector expression of seRNAs and enabled linear expression regulation while maintaining target cell-specific activation and inactivation in non-target cells. Optimal results were achieved by adapting the technology to in vitro transcribed seRNA. Conclusions: Our data show that seRNA technology develops its full functionality regardless of the type of transfer vector used. Furthermore, expression strength can be regulated within a wide range while maintaining consistent functionality which will enable broad applicability in medicine in the future. Full article
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30 pages, 2650 KB  
Article
Advanced Spectroscopic Studies of the AIE-Enhanced ESIPT Effect in a Selected 1,3,4-Thiadiazole Derivative in Liposomal Systems with DPPC
by Alicja Skrzypek, Iwona Budziak-Wieczorek, Lidia Ślusarczyk, Andrzej Górecki, Daniel Kamiński, Anita Kwaśniewska, Sylwia Okoń, Igor Różyło and Arkadiusz Matwijczuk
Int. J. Mol. Sci. 2025, 26(21), 10643; https://doi.org/10.3390/ijms262110643 - 31 Oct 2025
Viewed by 674
Abstract
Liposomal systems are advanced carriers of active substances which, thanks to their ability to encapsulate these substances, significantly improve their pharmacokinetics, bioavailability, and selectivity. This article presents the results of spectroscopic studies for a selected compound from the 1,3,4-thiadiazole group, namely 4-[5-(naphthalen-1-ylmethyl)-1,3,4-thiadiazol-2-yl]benzene-1,3-diol (NTBD, [...] Read more.
Liposomal systems are advanced carriers of active substances which, thanks to their ability to encapsulate these substances, significantly improve their pharmacokinetics, bioavailability, and selectivity. This article presents the results of spectroscopic studies for a selected compound from the 1,3,4-thiadiazole group, namely 4-[5-(naphthalen-1-ylmethyl)-1,3,4-thiadiazol-2-yl]benzene-1,3-diol (NTBD, see below in the text), in selected liposomal systems formed from the phospholipid 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC). Detailed spectroscopic analyses were carried out using electronic absorption and fluorescence spectroscopy; resonance light scattering (RLS) spectra measurements; dynamic light scattering (DLS); as well as time-resolved methods—fluorescence lifetime measurements using the TCSPC technique. Subsequently, based on the interpretation of spectra obtained by FTIR infrared spectroscopy, the preliminary molecular organization of the above-mentioned compounds within lipid multilayers was determined. It was found that NTBD preferentially occupies the region of polar lipid headgroups in the lipid multilayer, although it also noticeably interacts with the hydrocarbon chains of the lipids. Furthermore, X-ray diffraction (XRD) techniques were used to study the effect of NTBD on the molecular organization of DPPC lipid multilayers. Monomeric structures and aggregated forms of the above-mentioned 1,3,4-thiadiazole analogue were characterized using X-ray crystallography. Interesting dual fluorescence effects observed in steady-state fluorescence measurements were linked to the excited-state intramolecular proton transfer (ESIPT) effect (based on our earlier studies), which, in the obtained biophysical systems—liposomal systems with strong hydrophobicity—is greatly enhanced by aggregation-induced emission (AIE) effects. In summary, the research presented in this study, concerning the novel 1,3,4-thiadiazole derivative NTBD, is highly relevant to drug delivery systems, such as various model liposomal systems, as it demonstrates that depending on the concentration of the selected fluorophore, different forms may be present, allowing for appropriate modulation of its biological activity. Full article
(This article belongs to the Special Issue AIEgens in Action: Design, Mechanisms, and Emerging Applications)
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20 pages, 3922 KB  
Article
Both Benzannulation and Heteroatom-Controlled Photophysical Properties in Donor–π–Acceptor Ionic Dyes: A Combined Experimental and Theoretical Study
by Przemysław Krawczyk and Beata Jędrzejewska
Materials 2025, 18(20), 4676; https://doi.org/10.3390/ma18204676 - 12 Oct 2025
Viewed by 726
Abstract
Donor–π–acceptor (D–π–A) dyes have garnered significant attention due to their unique optical properties and potential applications in various fields, including optoelectronics, chemical sensing and bioimaging. This study presents the design, synthesis, and comprehensive photophysical investigation of a series of ionic dyes incorporating five- [...] Read more.
Donor–π–acceptor (D–π–A) dyes have garnered significant attention due to their unique optical properties and potential applications in various fields, including optoelectronics, chemical sensing and bioimaging. This study presents the design, synthesis, and comprehensive photophysical investigation of a series of ionic dyes incorporating five- and six-membered heterocyclic rings as electron-donating and electron-withdrawing units, respectively. The influence of the dye structure, i.e., (a) the systematically varied heteroatom (NMe, S and O) in donor moiety, (b) benzannulation of the acceptor part and (c) position of the donor vs. acceptor, on the photophysical properties was evaluated by steady-state and time-resolved spectroscopy across solvents of varying polarity. To probe solvatochromic behavior, the Reichardt parameters and the Catalán four-parameter scale, including polarizability (SP), dipolarity (SdP), acidity (SA) and basicity (SB) parameters, were applied. Emission dynamics were further analyzed through time-resolved fluorescence spectroscopy employing multi-exponential decay models to accurately describe fluorescence lifetimes. Time-dependent density functional theory (TDDFT) calculations supported the experimental findings by elucidating electronic structures, charge-transfer character, and dipole moments in the ground and excited states. The experimental results show the introduction of O or S instead of NMe causes substantial hypsochromic shifts in the absorption and emission bands. Benzannulation enhances the photoinduced charge transfer and causes red-shifted absorption spectra to be obtained without deteriorating the emission properties. Hence, by introducing an appropriate modification, it is possible to design materials with tunable photophysical properties for practical applications, e.g., in opto-electronics or sensing. Full article
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12 pages, 1225 KB  
Article
Resensitizing the Untreatable: Zidovudine and Polymyxin Combinations to Combat Pan-Drug-Resistant Klebsiella pneumoniae
by Jan Naseer Kaur, Jack F. Klem, Gebremedhin S. Hailu, Nader N. Nasief, Yang Liu, Allison Hanna, Albert Chen, Patricia Holden, Shivali Kapoor, Nicholas M. Smith, Mark Sutton, Jian Li and Brian T. Tsuji
Pharmaceuticals 2025, 18(10), 1531; https://doi.org/10.3390/ph18101531 - 11 Oct 2025
Viewed by 1116
Abstract
Background: The emergence of pan-drug-resistant (PDR) Klebsiella pneumoniae has compromised the efficacy of last-line agents, leaving few therapeutic options. Repurposing zidovudine, an FDA-approved thymidine analog with antibacterial activity, may enhance existing therapies, but pharmacodynamic data under clinically relevant conditions are scarce. This study [...] Read more.
Background: The emergence of pan-drug-resistant (PDR) Klebsiella pneumoniae has compromised the efficacy of last-line agents, leaving few therapeutic options. Repurposing zidovudine, an FDA-approved thymidine analog with antibacterial activity, may enhance existing therapies, but pharmacodynamic data under clinically relevant conditions are scarce. This study addresses this gap using static and dynamic in vitro models. Materials/methods: A PDR strain of Klebsiella pneumoniae harboring blaNDM-1blaCMY-6, blaCTX-M-15, blaSHV-2, and disrupted mgrB was used in this study. Minimum inhibitory concentrations (MICs) followed by static time-kills were performed to investigate the synergistic interplay between zidovudine and last-line antibiotics (ceftazidime/avibactam, polymyxin B). To simulate human pharmacokinetics, a hollow-fiber infection model (HFIM) was employed using steady-state concentrations of zidovudine (4 mg/L), polymyxin B (4 mg/L), and avibactam (22 mg/L). Structural and morphological effects on bacterial cells were examined via fluorescence microscopy following glutaraldehyde fixation. Results: In this study, the PDR K. pneumoniae showed a ~5-fold reduction in polymyxin MIC when combined with zidovudine (from >4 µg/mL to 0.25 µg/mL). Time-kill assays demonstrated ≥2.5 log10 CFU/mL bacterial reduction with zidovudine-based combinations, whereas monotherapies failed to inhibit bacterial growth. In the HFIM, the triple combination achieved rapid bactericidal activity (>3 log10 CFU/mL reduction within 4 h) and sustained killing (>5–6 log10 reduction maintained through 216 h), with bacterial counts remaining below 1 CFU/mL. In contrast, dual combinations initially reduced bacterial burden (1–3 log10 reduction) but failed to maintain suppression, with significant regrowth (>1010 CFU/mL) observed by 168 h. Microscopy corroborated these findings, revealing extensive cellular damage in the zidovudine-containing treatment arms. These HFIM results underscore the potential of zidovudine-based triple therapy in overcoming resistance to last-line antibiotics in K. pneumoniae. Conclusions: Our results provide promising unprecedented insight into novel zidovudine-based combination therapies against difficult-to-treat MBL Gram-negatives. The observed synergy in MIC reduction, rapid killing in time-kill assays, and near-complete eradication in the HFIM underscore the therapeutic potential of this triple combination. Future studies will focus on broadening the application of these novel combinations to other ‘superbugs’, such as highly resistant strains of Acinetobacter baumannii and Pseudomonas aeruginosa. Full article
(This article belongs to the Section Pharmacology)
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21 pages, 2160 KB  
Article
Highly Stable Supramolecular Donor–Acceptor Complexes Involving (Z)-, (E)-di(3-pyridyl)ethylene Derivatives as Weak Acceptors: Structure—Property Relationships
by Artem I. Vedernikov, Valeriy V. Volchkov, Mikhail N. Khimich, Mikhail Y. Mel’nikov, Fedor E. Gostev, Ivan V. Shelaev, Victor A. Nadtochenko, Lyudmila G. Kuz’mina, Judith A. K. Howard, Asya A. Efremova, Mikhail V. Rusalov and Sergey P. Gromov
Molecules 2025, 30(19), 3920; https://doi.org/10.3390/molecules30193920 - 29 Sep 2025
Viewed by 627
Abstract
The Z-isomer of N,N’-diammoniopropyl derivative of di(3-pyridyl)ethylene was synthesized. The structure and stability of complexes between this non-planar weak acceptor (A, (Z)-2) and a planar strong donor, the E-isomer of bis(18-crown-6)stilbene (D, (E [...] Read more.
The Z-isomer of N,N’-diammoniopropyl derivative of di(3-pyridyl)ethylene was synthesized. The structure and stability of complexes between this non-planar weak acceptor (A, (Z)-2) and a planar strong donor, the E-isomer of bis(18-crown-6)stilbene (D, (E)-1), were studied using X-ray diffraction, 1H NMR spectroscopy, and optical spectroscopy, including 1H NMR and spectrofluorimetric titrations. In MeCN, the components form a very stable pseudocyclic bimolecular complex (logKD·A = 8.48) due to homoditopic coordination of the ammonium groups of the acceptor to the crown moieties of the donor through numerous hydrogen bonds. Intrasupramolecular photo-driven electron transfer (ET) in the isomeric complexes of (E)-1 with (E)- and (Z)-2 was studied using steady-state absorption and fluorescence spectroscopy with time-resolved pulse absorption spectroscopy. It was found that back ET is approximately two times faster in complex (E)-(Z)-2 than in closely related (E)-(E)-2. Meanwhile, it is ~67 times slower in complex (E)-(E)-2 than in the isomeric complex based on N,N’-diammoniopropyl derivative of (E)-di(4-pyridyl)ethylene. Quantum chemical (DFT, TD-DFT) calculations suggest the actual photorelaxation pathway for the complexes under study. Full article
(This article belongs to the Section Photochemistry)
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30 pages, 4237 KB  
Article
On the “Bi-Phase” of Fluorescence to Scattering with Single-Fiber Illumination and Detection: A Quasi-Analytical Photon-Transport Approach Operated with Center-Illuminated Area Detection
by Daqing Piao
Photonics 2025, 12(9), 904; https://doi.org/10.3390/photonics12090904 - 9 Sep 2025
Viewed by 627
Abstract
Bi-phasic (with a local minimum) response of fluorescence to scattering when probed by a single fiber (SF) was first observed in 2003. Subsequent experiments and Monte Carlo studies have shown the bi-phasic turning of SF fluorescence to occur at a dimensionless reduced scattering [...] Read more.
Bi-phasic (with a local minimum) response of fluorescence to scattering when probed by a single fiber (SF) was first observed in 2003. Subsequent experiments and Monte Carlo studies have shown the bi-phasic turning of SF fluorescence to occur at a dimensionless reduced scattering of ~1 and vary with absorption. The bi-phase of SF fluorescence received semi-empirical explanations; however, better understandings of the bi-phase and its dependence on absorption are necessary. This work demonstrates a quasi-analytical projection of a bi-phasic pattern comparable to that of SF fluorescence via photon-transport analyses of fluorescence in a center-illuminated-area-detection (CIAD) geometry. This model-approach is principled upon scaling of the diffuse fluorescence between CIAD and a SF of the same size of collection, which expands the scaling of diffuse reflectance between CIAD and a SF discovered for steady-state and time-domain cases. Analytical fluorescence for CIAD is then developed via radial-integration of radially resolved fluorescence. The radiance of excitation is decomposed to surface, collimated, and diffusive portions to account for the surface, near the point-of-entry, and diffuse portion of fluorescence associated with a centered illumination. Radiative or diffuse transport methods are then used to quasi-analytically deduce fluorescence excited by the three portions of radiance. The resulting model of fluorescence for CIAD, while limiting to iso-transport properties at the excitation and emission wavelengths, is compared against the semi-empirical model for SF, revealing bi-phasic turning [0.5~2.6] at various geometric sizes [0.2, 0.4, 0.6, 0.8, 1.0 mm] and a change of three orders of magnitude in the absorption of the background medium. This model projects a strong reduction in fluorescence versus strong absorption at high scattering, which differs from the semi-empirical SF model’s projection of a saturating pattern unresponsive to further increases in the absorption. This framework of modeling fluorescence may be useful to project frequency-domain and lifetime pattens of fluorescence in an SF and CIAD. Full article
(This article belongs to the Section Biophotonics and Biomedical Optics)
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16 pages, 1892 KB  
Article
An Interdisciplinary Study of Lysozyme Interactions with Hexacyanoferrate(III)/(II) Ions
by Ola Grabowska, Krzysztof Żamojć, Anna Kloska, Paweł Niedziałkowski, Sergey A. Samsonov and Dariusz Wyrzykowski
Int. J. Mol. Sci. 2025, 26(17), 8511; https://doi.org/10.3390/ijms26178511 - 2 Sep 2025
Viewed by 1101
Abstract
In this article, the binding interactions of lysozyme with hexacyanoferrate(III)/(II), i.e., [Fe(CN)6]3− and [Fe(CN)6]4− ions, have been characterised using steady-state fluorescence spectroscopy (SF), isothermal titration calorimetry (ITC), circular dichroism spectroscopy (CD), cyclic voltammetry (CV), and molecular-dynamics-based computational [...] Read more.
In this article, the binding interactions of lysozyme with hexacyanoferrate(III)/(II), i.e., [Fe(CN)6]3− and [Fe(CN)6]4− ions, have been characterised using steady-state fluorescence spectroscopy (SF), isothermal titration calorimetry (ITC), circular dichroism spectroscopy (CD), cyclic voltammetry (CV), and molecular-dynamics-based computational approaches. Studies have shown that under experimental conditions (10 mM cacodylate buffer, pH 7, 298.15 K), complexes with a 1:1 stoichiometry are formed. Four distinct regions on the lysozyme surface patches with the potential to bind hexacyanoferrate(III)/(II) were identified and described. Thermodynamic parameters revealed that the interactions are predominantly governed by electrostatic and van der Waals forces. These interactions enhance the electron transfer kinetics of the [Fe(CN)6]3−/4− system. The secondary structure of the protein is not affected by these interactions. Enzyme activity studies demonstrated that the affinity of lysozyme for the substrate remained unchanged regardless of whether free lysozyme or the lysozyme-[Fe(CN)6]3−/4− complex was present in the test sample. Finally, biological tests performed on both Gram-positive (B. subtilis, S. aureus) and Gram-negative (E. coli, P. aeruginosa) bacteria confirmed the results of the biochemical analysis, indicating that [Fe(CN)6]3−/4− ions do not block the active site of the enzyme and do not interfere with its activity. Full article
(This article belongs to the Section Biochemistry)
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14 pages, 1482 KB  
Article
The Physiological Mechanism of Arbuscular Mycorrhizal in Regulating the Growth of Trifoliate Orange (Poncirus trifoliata L. Raf.) Under Low-Temperature Stress
by Changlin Li, Xian Pei, Qiaofeng Yang, Fuyuan Su, Chuanwu Yao, Hua Zhang, Zaihu Pang, Zhonghua Yao, Dejian Zhang and Yan Wang
Horticulturae 2025, 11(7), 850; https://doi.org/10.3390/horticulturae11070850 - 18 Jul 2025
Cited by 1 | Viewed by 954
Abstract
In recent years, low temperature has seriously threatened the citrus industry. Arbuscular mycorrhizal fungi (AMF) can enhance the absorption of nutrients and water and tolerance to abiotic stresses. In this study, pot experiments were conducted to study the effects of low-temperature stress on [...] Read more.
In recent years, low temperature has seriously threatened the citrus industry. Arbuscular mycorrhizal fungi (AMF) can enhance the absorption of nutrients and water and tolerance to abiotic stresses. In this study, pot experiments were conducted to study the effects of low-temperature stress on citrus (trifoliate orange, Poncirus trifoliata L. Raf.) with AMF (Diversispora epigaea D.e). The results showed that AMF inoculation significantly increased plant growth, chlorophyll fluorescence, and photosynthetic parameters. Compared with 25 °C, −5 °C significantly increased the relative conductance rate and the contents of malondialdehyde, hydrogen peroxide, soluble sugar soluble protein, and proline, and also enhanced the activities of catalase and superoxide dismutase, but dramatically reduced photosynthetic parameters. Compared with the non-AMF group, AMF significantly increased the maximum light quantum efficiency and steady-state light quantum efficiency at 25 °C (by 16.67% and 61.54%), and increased the same parameters by 71.43% and 140% at −5 °C. AMF also significantly increased the leaf net photosynthetic rate and transpiration rate at 25 °C (by 54.76% and 29.23%), and increased the same parameters by 72.97% and 26.67% at −5 °C. Compared with the non-AMF treatment, the AMF treatment significantly reduced malondialdehyde and hydrogen peroxide content at 25 °C (by 46.55% and 41.29%), and reduced them by 28.21% and 29.29% at −5 °C. In addition, AMF significantly increased the contents of soluble sugar, soluble protein, and proline at 25 °C (by 15.22%, 34.38%, and 11.38%), but these increased by only 9.64%, 0.47%, and 6.09% at −5 °C. Furthermore, AMF increased the activities of superoxide dismutase and catalase at 25 °C (by 13.33% and 13.72%), but these increased by only 5.51% and 13.46% at −5 °C. In conclusion, AMF can promote the growth of the aboveground and underground parts of trifoliate orange seedlings and enhance their resistance to low temperature via photosynthesis, osmoregulatory substances, and their antioxidant system. Full article
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22 pages, 6526 KB  
Article
Creating Blood Analogs to Mimic Steady-State Non-Newtonian Shear-Thinning Characteristics Under Various Thermal Conditions
by Hang Yi, Alexander Wang, Christopher Wang, Jared Chong, Chungyiu Ma, Luke Bramlage, Bryan Ludwig and Zifeng Yang
Bioengineering 2025, 12(7), 758; https://doi.org/10.3390/bioengineering12070758 - 12 Jul 2025
Viewed by 1542
Abstract
Blood analogs are widely employed in in vitro experiments such as particle image velocity (PIV) to secure hemodynamics, assisting pathophysiological diagnoses of neurovascular and cardiovascular diseases, as well as pre-surgical planning and intraoperative orientation. To obtain accurate physical parameters, which are critical for [...] Read more.
Blood analogs are widely employed in in vitro experiments such as particle image velocity (PIV) to secure hemodynamics, assisting pathophysiological diagnoses of neurovascular and cardiovascular diseases, as well as pre-surgical planning and intraoperative orientation. To obtain accurate physical parameters, which are critical for diagnosis and treatment, blood analogs should exhibit realistic non-Newtonian shear-thinning features. In this study, two types of blood analogs working under room temperature (293.15 K) were created to mimic the steady-state shear-thinning features of blood over a temperature range of 295 to 312 K and a shear range of 1~250 s−1 at a hematocrit of ~40%. Type I was a general-purpose analog composed of deionized (DI) water and xanthan gum (XG) powder, while Type II was specially designed for PIV tests, incorporating DI water, XG, and fluorescent microspheres. By minimizing the root mean square deviation between generated blood analogs and an established viscosity model, formulas for both blood analogs were successfully derived for the designated temperatures. The results showed that both blood analogs could replicate the shear-thinning viscosities of real blood, with the averaged relative discrepancy < 5%. Additionally, a strong linear correlation was observed between body temperature and XG concentration in both blood analogs (coefficient of determination > 0.96): for Type I, 295–312 K correlates with 140–520 ppm, and for Type II, 295–315 K correlates with 200–560 ppm. This work bridges the gap between idealized steady-state non-Newtonian viscosity models of blood and the complexities of real-world physiological conditions, offering a versatile platform for advancing particle image velocimetry tests and hemodynamics modeling, optimizing therapeutic interventions, and enhancing biomedical technologies in temperature-sensitive environments. Full article
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20 pages, 2421 KB  
Article
Mitigation of Water-Deficit Stress in Soybean by Seaweed Extract: The Integrated Approaches of UAV-Based Remote Sensing and a Field Trial
by Md. Raihanul Islam, Hasan Muhammad Abdullah, Md Farhadur Rahman, Mahfuzul Islam, Abdul Kaium Tuhin, Md Ashiquzzaman, Kh Shakibul Islam and Daniel Geisseler
Drones 2025, 9(7), 487; https://doi.org/10.3390/drones9070487 - 10 Jul 2025
Cited by 4 | Viewed by 1915
Abstract
In recent years, global agriculture has encountered several challenges exacerbated by the effects of changes in climate, such as extreme water shortages for irrigation and heat waves. Water-deficit stress adversely affects the morpho-physiology of numerous crops, including soybean (Glycine max L.), which [...] Read more.
In recent years, global agriculture has encountered several challenges exacerbated by the effects of changes in climate, such as extreme water shortages for irrigation and heat waves. Water-deficit stress adversely affects the morpho-physiology of numerous crops, including soybean (Glycine max L.), which is considered as promising crop in Bangladesh. Seaweed extract (SWE) has the potential to improve crop yield and alleviate the adverse effects of water-deficit stress. Remote and proximal sensing are also extensively utilized in estimating morpho-physiological traits owing to their cost-efficiency and non-destructive characteristics. The study was carried out to evaluate soybean morpho-physiological traits under the application of water extracts of Gracilaria tenuistipitata var. liui (red seaweed) with two varying irrigation water conditions (100% of total crop water requirement (TCWR) and 70% of TCWR). Principal component analysis (PCA) revealed that among the four treatments, the 70% irrigation + 5% (v/v) SWE and the 100% irrigation treatments overlapped, indicating that the application of SWE effectively mitigated water-deficit stress in soybeans. This result demonstrates that the foliar application of 5% SWE enabled soybeans to achieve morpho-physiological performance comparable to that of fully irrigated plants while reducing irrigation water use by 30%. Based on Pearson’s correlation matrix, a simple linear regression model was used to ascertain the relationship between unmanned aerial vehicle (UAV)-derived vegetation indices and the field-measured physiological characteristics of soybean. The Normalized Difference Red Edge (NDRE) strongly correlated with stomatal conductance (R2 = 0.76), photosystem II efficiency (R2 = 0.78), maximum fluorescence (R2 = 0.64), and apparent transpiration rate (R2 = 0.69). The Soil Adjusted Vegetation Index (SAVI) had the highest correlation with leaf relative water content (R2 = 0.87), the Blue Normalized Difference Vegetation Index (bNDVI) with steady-state fluorescence (R2 = 0.56) and vapor pressure deficit (R2 = 0.74), and the Green Normalized Difference Vegetation Index (gNDVI) with chlorophyll content (R2 = 0.73). Our results demonstrate how UAV and physiological data can be integrated to improve precision soybean farming and support sustainable soybean production under water-deficit stress. Full article
(This article belongs to the Special Issue Recent Advances in Crop Protection Using UAV and UGV)
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25 pages, 3592 KB  
Article
Flavonoid Glycosides and Phenolic Acids from Inula Oculus-Christi Modulate Membrane Organization and Provide Antioxidant Protection
by Ralitsa Veleva, Tanya Topouzova-Hristova, Aneliya Kostadinova, Dayana Benkova, Antoaneta Trendafilova, Viktoria Ivanova, Veselina Moskova-Doumanova, Kirilka Mladenova, Jordan Doumanov, Vesela Yordanova and Galya Staneva
Molecules 2025, 30(13), 2740; https://doi.org/10.3390/molecules30132740 - 25 Jun 2025
Cited by 1 | Viewed by 1618
Abstract
Oxidative stress induces lipid peroxidation within the membrane bilayer, thereby compromising membrane integrity. Polyphenols (PPs), renowned for their antioxidant properties, have been shown to mitigate oxidative damage. Here, we investigated the structural and antioxidant effects of PPs—specifically flavonoid glycosides (FGs) and phenolic acids [...] Read more.
Oxidative stress induces lipid peroxidation within the membrane bilayer, thereby compromising membrane integrity. Polyphenols (PPs), renowned for their antioxidant properties, have been shown to mitigate oxidative damage. Here, we investigated the structural and antioxidant effects of PPs—specifically flavonoid glycosides (FGs) and phenolic acids (PAs)—extracted from Inula oculus-christi using steady-state fluorescence spectroscopy in both model and cell membranes. Membrane lipid order was evaluated using DPH and Laurdan spectroscopy, while DPH-TEMPO fluorescence quenching was employed to quantify raft-like domain formation in model systems. The antioxidant capacity of the PP extracts was assessed via fluorescence quenching of cis-parinaric acid. Both FGs and PAs conferred approximately 2-fold antioxidant protection, with FGs showing a 1.13-fold greater effect than PAs. In addition, both PP classes promoted lipid raft formation, particularly in cholesterol-rich membranes. PPs increased order in the liquid-disordered (Ld) phase while inducing disorder in the liquid-ordered (Lo) phase, depending on the lipid-to-PP ratio. Notably, FGs enhanced membrane fluidity more strongly in A549 than in MDCKII cells, as reflected by a ~5.7-fold decrease in Laurdan GP in A549 (from 0.04 to −0.17) versus a ~1.4-fold decrease in MDCKII at 200 μg/mL. These findings highlight the dual structural and antioxidative roles of FGs and PAs in preserving membrane integrity under oxidative stress. Full article
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11 pages, 2195 KB  
Article
Synthesis and Properties of 1H-Pyrrolo[3′,2′:3,4]fluoreno[9,1-gh]quinolines and 7H-Pyrrolo[2′,3′,4′:4,10]anthra[1,9-fg]quinolines
by Aleksandra Khomutetckaia, Peter Ehlers, Alexander Villinger and Peter Langer
Molecules 2025, 30(12), 2615; https://doi.org/10.3390/molecules30122615 - 16 Jun 2025
Viewed by 1496
Abstract
We report the synthesis of pyrrolo[3′,2′:3,4]fluoreno[9,1-gh]quinoline and pyrrolo[2′,3′,4′:4,10]anthra[1,9-fg]quinoline derivatives. This novel class of N-doped polycyclic heteroaromatic compounds was synthesized by a site-selective cross-coupling reaction followed by acid-mediated cycloisomerization and Pd-catalyzed CH arylation as the final ring-closing reactions. Preliminary optical [...] Read more.
We report the synthesis of pyrrolo[3′,2′:3,4]fluoreno[9,1-gh]quinoline and pyrrolo[2′,3′,4′:4,10]anthra[1,9-fg]quinoline derivatives. This novel class of N-doped polycyclic heteroaromatic compounds was synthesized by a site-selective cross-coupling reaction followed by acid-mediated cycloisomerization and Pd-catalyzed CH arylation as the final ring-closing reactions. Preliminary optical and aromatic properties were studied by means of steady-state absorption and fluorescence spectroscopy and DFT calculation. Special emphasis was placed on the impact of ring alternation and position of the N-doping within the scaffold. Full article
(This article belongs to the Section Organic Chemistry)
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