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16 pages, 1526 KiB  
Article
Effects of Different Phosphorus Addition Levels on Physiological and Growth Traits of Pinus massoniana (Masson Pine) Seedlings
by Zhenya Yang and Hui Wang
Forests 2025, 16(8), 1265; https://doi.org/10.3390/f16081265 (registering DOI) - 2 Aug 2025
Abstract
Soil phosphorus (P) availability is an important determinant of productivity in Pinus massoniana (Masson pine) forests. The mechanistic bases governing the physiological and growth responses of Masson pine to varying soil P conditions remain insufficiently characterized. This study aims to decipher the adaptive [...] Read more.
Soil phosphorus (P) availability is an important determinant of productivity in Pinus massoniana (Masson pine) forests. The mechanistic bases governing the physiological and growth responses of Masson pine to varying soil P conditions remain insufficiently characterized. This study aims to decipher the adaptive strategies of Masson pine to different soil P levels, focusing on root morphological–architectural plasticity and the allocation dynamics of nutrient elements and photosynthetic assimilates. One-year-old potted Masson pine seedlings were exposed to four P addition treatments for one year: P0 (0 mg kg−1), P1 (25 mg kg−1), P2 (50 mg·kg−1), and P3 (100 mg kg−1). In July and December, measurements were conducted on seedling organ biomass, root morphological indices [root length (RL), root surface area (RSA), root diameter (RD), specific root length (SRL), and root length ratio (RLR) for each diameter grade], root architectural indices [number of root tips (RTs), fractal dimension (FD), root branching angle (RBA), and root topological index (TI)], as well as the content of nitrogen (N), phosphorus (P), carbon (C), and non-structural carbohydrates (NSCs) in roots, stems, and leaves. Compared with the P0 treatment, P2 and P3 significantly increased root biomass, root–shoot ratio, RL, RSA, RTs, RLR of finer roots (diameter ≤ 0.4 mm), nutrient accumulation ratio in roots, and starch (ST) content in roots, stems and leaves. Meanwhile, they decreased soluble sugar (SS) content, SS/ST ratio, C and N content, and N/P and C/P ratios in stems and leaves, as well as nutrient accumulation ratio in leaves. The P3 treatment significantly reduced RBA and increased FD and SRL. Our results indicated that Masson pine adapts to low P by developing shallower roots with a reduced branching intensity and promoting the conversion of ST to SS. P’s addition effectively alleviates growth limitations imposed by low P, stimulating root growth, branching, and gravitropism. Although a sole P addition promotes short-term growth and P uptake, it triggers a substantial consumption of N, C, and SS, leading to significant decreases in N/P and C/P ratios and exacerbating N’s limitation, which is detrimental to long-term growth. Under high-P conditions, Masson pine strategically prioritizes allocating limited N and SS to roots, facilitating the formation of thinner roots with low C costs. Full article
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17 pages, 1448 KiB  
Article
Nursery Propagation Systems for High-Quality Strawberry (Fragaria × ananassa Duch.) Plug Plant Production from Micropropagated, Soilless-Grown Mother Plants
by Valentina Morresi, Franco Capocasa, Francesca Balducci, Jacopo Diamanti and Bruno Mezzetti
Horticulturae 2025, 11(8), 888; https://doi.org/10.3390/horticulturae11080888 (registering DOI) - 1 Aug 2025
Abstract
The commercial propagation of strawberries is increasingly constrained by the incidence of both established and emerging soilborne pathogens, particularly under soil cultivation systems. Micropropagation represents an effective strategy to ensure the production of virus-free, true-to-type mother plants suitable for high-efficiency propagation. In this [...] Read more.
The commercial propagation of strawberries is increasingly constrained by the incidence of both established and emerging soilborne pathogens, particularly under soil cultivation systems. Micropropagation represents an effective strategy to ensure the production of virus-free, true-to-type mother plants suitable for high-efficiency propagation. In this study, micropropagated mother plants of four short-day cultivars (‘Francesca’, ‘Silvia’, ‘Lauretta’, and ‘Dina’) and one ever-bearing advanced selection (‘AN12,13,58’) were cultivated under a controlled soilless system. Quantitative parameters including number of runners per plant, runner length, and number of tips per runner and per plant were assessed to evaluate propagation performance. Micropropagated mother plants exhibited a significantly higher stoloniferous potential compared to in vivo-derived mother plants (frigo plants type A), with the latter producing approximately 50% fewer propagules. Rooted tips of ‘Dina’ were further assessed under different fertigation regimes. The NPK 20–20–20 nutrient solution enhanced photosynthetic activity and shoot and root biomass (length, diameter, and volume via WinRHIZO analysis). These results confirm the suitability of micropropagated mother plants grown in soilless conditions for efficient, high-quality clonal propagation and support the integration of such systems into certified nursery production schemes. Full article
(This article belongs to the Section Propagation and Seeds)
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21 pages, 6231 KiB  
Article
Integrating In Vitro Propagation and Machine Learning Modeling for Efficient Shoot and Root Development in Aronia melanocarpa
by Mehmet Yaman, Esra Bulunuz Palaz, Musab A. Isak, Serap Demirel, Tolga İzgü, Sümeyye Adalı, Fatih Demirel, Özhan Şimşek, Gheorghe Cristian Popescu and Monica Popescu
Horticulturae 2025, 11(8), 886; https://doi.org/10.3390/horticulturae11080886 (registering DOI) - 1 Aug 2025
Abstract
Aronia melanocarpa (black chokeberry) is a medicinally valuable small fruit species, yet its commercial propagation remains limited by low rooting and genotype-specific responses. This study developed an efficient, callus-free micropropagation and rooting protocol using a Shrub Plant Medium (SPM) supplemented with 5 mg/L [...] Read more.
Aronia melanocarpa (black chokeberry) is a medicinally valuable small fruit species, yet its commercial propagation remains limited by low rooting and genotype-specific responses. This study developed an efficient, callus-free micropropagation and rooting protocol using a Shrub Plant Medium (SPM) supplemented with 5 mg/L BAP in large 660 mL jars, which yielded up to 27 shoots per explant. Optimal rooting (100%) was achieved with 0.5 mg/L NAA + 0.25 mg/L IBA in half-strength SPM. In the second phase, supervised machine learning models, including Random Forest (RF), XGBoost, Gaussian Process (GP), and Multilayer Perceptron (MLP), were employed to predict morphogenic traits based on culture conditions. XGBoost and RF outperformed other models, achieving R2 values exceeding 0.95 for key variables such as shoot number and root length. These results demonstrate that data-driven modeling can enhance protocol precision and reduce experimental workload in plant tissue culture. The study also highlights the potential for combining physiological understanding with artificial intelligence to streamline future in vitro applications in woody species. Full article
(This article belongs to the Special Issue Tissue Culture and Micropropagation Techniques of Horticultural Crops)
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20 pages, 1379 KiB  
Article
Combined Effects of Polyethylene and Bordeaux Mixture on the Soil–Plant System: Phytotoxicity, Copper Accumulation and Changes in Microbial Abundance
by Silvia Romeo-Río, Huguette Meta Foguieng, Antía Gómez-Armesto, Manuel Conde-Cid, David Fernández-Calviño and Andrés Rodríguez-Seijo
Agriculture 2025, 15(15), 1657; https://doi.org/10.3390/agriculture15151657 - 1 Aug 2025
Abstract
Greenhouses have positively impacted plant production by allowing the cultivation of different crops per year. However, the accumulation of agricultural plastics, potentially contaminated with agrochemicals, raises environmental concerns. This work evaluates the combined effect of Bordeaux mixture and low-density polyethylene (LDPE) microplastics (<5 [...] Read more.
Greenhouses have positively impacted plant production by allowing the cultivation of different crops per year. However, the accumulation of agricultural plastics, potentially contaminated with agrochemicals, raises environmental concerns. This work evaluates the combined effect of Bordeaux mixture and low-density polyethylene (LDPE) microplastics (<5 mm) on the growth of lettuce (Lactuca sativa L.) and soil microbial communities. Different levels of Bordeaux mixture (0, 100 and 500 mg kg−1), equivalent to Cu(II) concentrations (0, 17 and 83 mg kg−1), LDPE microplastics (0, 1% and 5%) and their combination were selected. After 28 days of growth, biometric and photosynthetic parameters, Cu uptake, and soil microbial responses were evaluated. Plant germination and growth were not significantly affected by the combination of Cu and plastics. However, individual Cu treatments influenced root and shoot length and biomass. Chlorophyll and carotenoid concentrations increased with Cu addition, although the differences were not statistically significant. Phospholipid fatty acid (PLFA) analysis revealed a reduction in microbial biomass at the highest Cu dose, whereas LDPE alone showed limited effects and may reduce Cu bioavailability. These results suggest that even at the highest concentration added, Cu can act as a plant nutrient, while the combination of Cu–plastics showed varying effects on plant growth and soil microbial communities. Full article
(This article belongs to the Special Issue Impacts of Emerging Agricultural Pollutants on Environmental Health)
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16 pages, 1659 KiB  
Article
Ricinus communis L. Leaf Extracts as a Sustainable Alternative for Weed Management
by Aline Mazoy Lopes, Lucas Kila Ribeiro, Maurício Ricardo de Melo Cogo, Lucas Mironuk Frescura, Marcelo Barcellos da Rosa, Alex Schulz, Flávio Dias Mayer, Ederson Rossi Abaide, Marcus Vinícius Tres and Giovani Leone Zabot
Sustainability 2025, 17(15), 6942; https://doi.org/10.3390/su17156942 (registering DOI) - 30 Jul 2025
Viewed by 128
Abstract
Weeds pose a significant challenge to agricultural productivity, requiring control strategies that are both effective and environmentally sustainable. Therefore, this study evaluated the inhibitory potential of aqueous extracts from Ricinus communis L. leaves to manage the weeds Oryza sativa L. (weedy rice) and [...] Read more.
Weeds pose a significant challenge to agricultural productivity, requiring control strategies that are both effective and environmentally sustainable. Therefore, this study evaluated the inhibitory potential of aqueous extracts from Ricinus communis L. leaves to manage the weeds Oryza sativa L. (weedy rice) and Cyperus ferax. Extracts were obtained through pressurized liquid extraction using water as the solvent. Bioassays were conducted during pre- and post-emergence stages by foliar spraying 15 and 30 days after sowing (DAS). The effect of extraction time (1–30 min) on inhibitory efficacy was also assessed. Chemical profiles of the extracts were characterized using high-performance liquid chromatography. The extracts significantly inhibited seed germination, with suppression rates reaching 92.7%. Plant growth was also diminished, particularly with earlier treatments (at 15 DAS), resulting in reductions of up to 32% and 53% in shoot length, and 69% and 73% in total dry mass for O. sativa L. and C. ferax, respectively. Mortality rates of O. sativa L. and C. ferax reached 64% and 58%, respectively. Phenolic compounds were identified in the extracts, and higher concentrations were observed at shorter extraction times. These findings underscore the potential of R. communis L. leaf extracts as an ecologically sustainable alternative for weed management, providing an effective and natural approach that may reduce reliance on synthetic herbicides and mitigate their environmental impact. Full article
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18 pages, 3095 KiB  
Article
Investigating Seed Germination, Seedling Growth, and Enzymatic Activity in Onion (Allium cepa) Under the Influence of Plasma-Treated Water
by Sabnaj Khanam, Young June Hong, Eun Ha Choi and Ihn Han
Int. J. Mol. Sci. 2025, 26(15), 7256; https://doi.org/10.3390/ijms26157256 - 27 Jul 2025
Viewed by 272
Abstract
Seed germination and early seedling growth are pivotal stages that define crop establishment and yield potential. Conventional agrochemicals used to improve these processes often raise environmental concerns, highlighting the need for sustainable alternatives. In this study, we demonstrated that water treated with cylindrical [...] Read more.
Seed germination and early seedling growth are pivotal stages that define crop establishment and yield potential. Conventional agrochemicals used to improve these processes often raise environmental concerns, highlighting the need for sustainable alternatives. In this study, we demonstrated that water treated with cylindrical dielectric barrier discharge (c-DBD) plasma, enriched with nitric oxide (NO) and reactive nitrogen species (RNS), markedly enhanced onion (Allium cepa) seed germination and seedling vigor. The plasma-treated water (PTW) promoted rapid imbibition, broke dormancy, and accelerated germination rates beyond 98%. Seedlings irrigated with PTW exhibited significantly increased biomass, root and shoot length, chlorophyll content, and antioxidant enzyme activities, accompanied by reduced lipid peroxidation. Transcriptomic profiling revealed that PTW orchestrated a multifaceted regulatory network by upregulating gibberellin biosynthesis genes (GA3OX1/2), suppressing abscisic acid signaling components (ABI5), and activating phenylpropanoid metabolic pathways (PAL, 4CL) and antioxidant defense genes (RBOH1, SOD). These molecular changes coincided with elevated NO2 and NO3 levels and finely tuned hydrogen peroxide dynamics, underpinning redox signaling crucial for seed activation and stress resilience. Our findings establish plasma-generated NO-enriched water as an innovative, eco-friendly technology that leverages redox and hormone crosstalk to stimulate germination and early growth, offering promising applications in sustainable agriculture. Full article
(This article belongs to the Special Issue Plasma-Based Technologies for Food Safety and Health Enhancement)
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25 pages, 4954 KiB  
Article
Local Fungi Promote Plant Growth by Positively Affecting Rhizosphere Metabolites to Drive Beneficial Microbial Assembly
by Deyu Dong, Zhanling Xie, Jing Guo, Bao Wang, Qingqing Peng, Jiabao Yang, Baojie Deng, Yuan Gao, Yuting Guo, Xueting Fa and Jianing Yu
Microorganisms 2025, 13(8), 1752; https://doi.org/10.3390/microorganisms13081752 - 26 Jul 2025
Viewed by 332
Abstract
Ecological restoration in the cold and high-altitude mining areas of the Qinghai–Tibet Plateau is faced with dual challenges of extreme environments and insufficient microbial adaptability. This study aimed to screen local microbial resources with both extreme environmental adaptability and plant-growth-promoting functions. Local fungi [...] Read more.
Ecological restoration in the cold and high-altitude mining areas of the Qinghai–Tibet Plateau is faced with dual challenges of extreme environments and insufficient microbial adaptability. This study aimed to screen local microbial resources with both extreme environmental adaptability and plant-growth-promoting functions. Local fungi (DK; F18-3) and commercially available bacteria (B0) were used as materials to explore their regulatory mechanisms for plant growth, soil physicochemical factors, microbial communities, and metabolic profiles in the field. Compared to bacterial treatments, local fungi treatments exhibited stronger ecological restoration efficacy. In addition, the DK and F18-3 strains, respectively, increased shoot and root biomass by 23.43% and 195.58% and significantly enhanced soil nutrient content and enzyme activity. Microbiome analysis further implied that, compared with the CK, DK treatment could significantly improve the α-diversity of fungi in the rhizosphere soil (the Shannon index increased by 14.27%) and increased the amount of unique bacterial genera in the rhizosphere soil of plants, totaling fourteen genera. Meanwhile, this aggregated the most biomarkers and beneficial microorganisms and strengthened the interactions among beneficial microorganisms. After DK treatment, twenty of the positively accumulated differential metabolites (DMs) in the plant rhizosphere were highly positively associated with six plant traits such as shoot length and root length, as well as beneficial microorganisms (e.g., Apodus and Pseudogymnoascus), but two DMs were highly negatively related to plant pathogenic fungi (including Cistella and Alternaria). Specifically, DK mainly inhibited the growth of pathogenic fungi through regulating the accumulation of D-(+)-Malic acid and Gamma-Aminobutyric acid (Cistella and Alternaria decreased by 84.20% and 58.53%, respectively). In contrast, the F18-3 strain mainly exerted its antibacterial effect by enriching Acidovorax genus microorganisms. This study verified the core role of local fungi in the restoration of mining areas in the Qinghai–Tibet Plateau and provided a new direction for the development of microbial agents for ecological restoration in the Qinghai–Tibet Plateau. Full article
(This article belongs to the Section Plant Microbe Interactions)
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18 pages, 1367 KiB  
Article
Intensification of Pea (Pisum sativum L.) Production in Organic Farming: Effects of Biological Treatments on Plant Growth, Seed Yield, and Protein Content
by Thi Giang Nguyen, Petr Konvalina, Ivana Capouchová, Petr Dvořák, Kristýna Perná, Marek Kopecký, Trong Nghia Hoang, Jana Lencová, Andrea Bohatá, Miloslava Kavková, Yves Theoneste Murindangabo, David Kabelka and Dang Khoa Tran
Agronomy 2025, 15(8), 1792; https://doi.org/10.3390/agronomy15081792 - 25 Jul 2025
Viewed by 195
Abstract
The adoption of biological control strategies plays a crucial role in ensuring the sustainability of organic agricultural practices. A field experiment was conducted in 2023 and 2024 to evaluate the impact of biological treatments using lactic acid bacteria (LAB) Lactiplantibacillus plantarum and mycoparasitic [...] Read more.
The adoption of biological control strategies plays a crucial role in ensuring the sustainability of organic agricultural practices. A field experiment was conducted in 2023 and 2024 to evaluate the impact of biological treatments using lactic acid bacteria (LAB) Lactiplantibacillus plantarum and mycoparasitic fungus (MPF) Trichoderma virens applied through seed treatment and foliar application separately and in combination on agronomic characteristics and pea yield in organic cultivation. Seed treatment with LAB and MPF resulted in a notable improvement in shoot length and root dry weight, while an increase in root nodule number was observed exclusively with LAB. The combined application of MPF as a seed treatment and LAB as a foliar application at the flowering stage significantly enhanced pod weight per plant, seed number per pod and per plant, and seed weight compared to treatments with LAB applied as either a foliar or seed treatment separately, as well as the untreated control. However, the yield responses to individual and combined treatments under field conditions demonstrated variability and inconsistency. Protein content ranged from 21.24% to 21.61%, and no significant differences observed between treatments. This is the first field report directly comparing the effectiveness of treatments on organic pea production. The findings offer promising avenues for assessing the long-term impacts of these treatments on the sustainable intensification of pea cultivation. Full article
(This article belongs to the Special Issue Cereal–Legume Cropping Systems)
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12 pages, 1597 KiB  
Article
Effects of Anthropogenic Vibratory Noise on Plant Development and Herbivory
by Estefania Velilla, Laura Bellato, Eleanor Collinson and Wouter Halfwerk
Acoustics 2025, 7(3), 45; https://doi.org/10.3390/acoustics7030045 - 25 Jul 2025
Viewed by 234
Abstract
Anthropogenic infrastructure, such as inland wind turbines commonly found in agricultural fields, has substantially increased subterranean vibratory noise in the past decades. Plants, being rooted in soil, are continuously exposed to these vibrations, yet we have little understanding of how vibrational noise affects [...] Read more.
Anthropogenic infrastructure, such as inland wind turbines commonly found in agricultural fields, has substantially increased subterranean vibratory noise in the past decades. Plants, being rooted in soil, are continuously exposed to these vibrations, yet we have little understanding of how vibrational noise affects plant development and, consequently, plant–insect interactions. Here, we examine the impact of windmill-like vibrational noise on the growth of Pisum sativum and its full-factorial interaction with the generalist herbivore Spodoptera exigua. Plants were exposed to either high or low vibrational noise from seed germination to the seed production stage. We recorded germination, flowering, fruiting time, and daily shoot length. Additionally, we measured herbivory intensity by Spodoptera exigua caterpillars placed on a subset of plants. Plants exposed to high vibrational noise grew significantly faster and taller than those in the low-noise treatment. Additionally, we found a marginally significant trend for earlier flowering in plants exposed to high noise. We did not find a significant effect of vibrational noise on herbivory. Our results suggest that underground vibrational noise can influence plant growth rates, which may potentially have ecological and agricultural implications. Faster growth may alter interspecific competition and shift trade-offs between growth and defense. Understanding these effects is important in assessing the broader ecological consequences of renewable energy infrastructure. Full article
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18 pages, 5627 KiB  
Article
The Influence of Bud Positions on the Changes in Carbohydrates and Nitrogen in Response to Hydrogen Cyanamide During Budbreak in Low-Chill Kiwifruit
by Wanichaya Chaiwimol, Wisuwat Songnuan, Hitoshi Ohara, Yotin Juprasong and Aussanee Pichakum
Horticulturae 2025, 11(7), 847; https://doi.org/10.3390/horticulturae11070847 - 17 Jul 2025
Viewed by 836
Abstract
Climate change has contributed to a decline in winter chilling accumulation, a critical requirement for budbreak in temperate fruit crops. Its consequence has been a reduction in fruit production. To compensate for insufficient chilling, hydrogen cyanamide (HC) is widely applied, though its effectiveness [...] Read more.
Climate change has contributed to a decline in winter chilling accumulation, a critical requirement for budbreak in temperate fruit crops. Its consequence has been a reduction in fruit production. To compensate for insufficient chilling, hydrogen cyanamide (HC) is widely applied, though its effectiveness remains limited. This study investigated the effect of HC application on budbreak in low-chill kiwifruit under warm conditions by correlating phenological responses with changes in carbohydrate and nitrogen concentrations in bark tissues across bud positions. Phenological observations revealed the highest budbreak percentage and total flower buds at the apical position. HC significantly increased budbreak by 58.82% at the apical position and by 375% at the middle position, with corresponding increases in total flower buds by 148.78% and 1066.67%, respectively. Additionally, shoot lengths were uniform among bud positions in HC-treated canes, whereas non-treated canes showed shoot length heterogeneity. Moreover, HC treatment triggered an earlier and more pronounced reduction in soluble sugars (sucrose and hexoses) concentrations along the gradient from apical to basal bud positions, where the response was strongest at the apical position, which was strongly associated with enhanced budbreak percentages and total flower bud formation. While total nitrogen content was highest in the apical position, it was unaffected by HC application. These findings indicate that HC may promote budbreak by enhancing the mobilization and consumption of soluble sugars for bud growth, thereby improving budbreak performance, flower bud production, and uniform shoot development in low-chill kiwifruit under warm conditions. Full article
(This article belongs to the Section Fruit Production Systems)
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19 pages, 2186 KiB  
Article
Optimizing Rooting and Growth of Salvia rosmarinus Cuttings in Soilless Systems Affected by Growth Regulators
by Georgios Lykokanellos, Ioannis Lagogiannis, Aglaia Liopa-Tsakalidi, Sofia Anna Barla and Georgios Salachas
Plants 2025, 14(14), 2210; https://doi.org/10.3390/plants14142210 - 17 Jul 2025
Viewed by 313
Abstract
This study investigated how propagation systems, growth regulators, and hormone formulations interactively affect the rooting and subsequent growth of rosemary (Salvia rosmarinus Spenn) cuttings. A three factorial (3 × 2 × 7) experiment was conducted under a fully controlled greenhouse environment, incorporating [...] Read more.
This study investigated how propagation systems, growth regulators, and hormone formulations interactively affect the rooting and subsequent growth of rosemary (Salvia rosmarinus Spenn) cuttings. A three factorial (3 × 2 × 7) experiment was conducted under a fully controlled greenhouse environment, incorporating three soilless propagation systems (mist, float, aeroponics), two rooting hormone formulations (powder and gel-based IBA), and two growth regulators (paclobutrazol and daminozide) at three concentrations each. Significant differences (p < 0.001) were found in shoot height, root length, and number of lateral roots. The float system combined with powder hormone and no retardants achieved the highest shoot height (mean = 16.7 cm), while aeroponics with powder hormone and daminozide 1000 ppm promoted the greatest root branching (mean = 12.2 lateral roots per cutting). Root length was maximized (mean = 15.9 cm) under float systems with daminozide 1000 ppm. High doses of both growth regulators negatively affected all parameters across systems. Post-transplantation monitoring confirmed that cuttings from float and mist systems treated with powder hormone and low or no growth retardants exhibited superior establishment and net growth over 60 days. These findings demonstrate the critical importance of pairing hormone type, regulator concentration, and propagation system, providing actionable protocols for nursery managers aiming to enhance Salvia rosmarinus propagation in commercial practice. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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13 pages, 4687 KiB  
Article
Temporary Immersion Bioreactor for In Vitro Multiplication of Raspberry (Rubus idaeus L.)
by Bruno Reyes-Beristain, Eucario Mancilla-Álvarez, José Abel López-Buenfil and Jericó Jabín Bello-Bello
Horticulturae 2025, 11(7), 842; https://doi.org/10.3390/horticulturae11070842 - 17 Jul 2025
Viewed by 265
Abstract
Raspberry (Rubus idaeus L.) micropropagation is an alternative for obtaining plantlets with high genetic and phytosanitary quality. The objective of this study was to establish a protocol for the micropropagation of raspberry (Rubus idaeus L.) using the temporary immersion bioreactor, under [...] Read more.
Raspberry (Rubus idaeus L.) micropropagation is an alternative for obtaining plantlets with high genetic and phytosanitary quality. The objective of this study was to establish a protocol for the micropropagation of raspberry (Rubus idaeus L.) using the temporary immersion bioreactor, under intermittent immersion periods and different culture medium volumes. The effect of the liquid medium using the TIB and semisolid was evaluated. Different immersion frequencies and culture medium volumes per explant were evaluated in the TIB. In all treatments, the number of shoots per explant, shoot length, number of leaves per explant, percentage of hyperhydricity, and chlorophyll and β-carotene content at multiplication stage were evaluated. The generated shoots, without a root system, were transferred to the acclimatization stage. The results show that the TIB with an immersion frequency of 2 min every 8 h and a volume of 25 mL of culture medium per explant had the best developmental parameters, with 5.75 shoots per explant, a shoot length of 3.44 cm, and 2% hyperhydricity. The highest chlorophyll and β-carotene content was observed in the TIB at different immersion frequencies of 4, 8 and 12 h, with 25 and 50 mL per explant. Survival percentages higher than 96% were observed in all methods evaluated. In conclusion, the evaluated immersion system is an efficient alternative for R. idaeus micropropagation, without using a rooting stage. Full article
(This article belongs to the Special Issue Tissue Culture and Micropropagation Techniques of Horticultural Crops)
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19 pages, 2405 KiB  
Article
Antifungal Activity of Quaternary Pyridinium Salts Against Fusarium culmorum in Wheat Seedlings
by Tamara Siber, Elena Petrović, Jasenka Ćosić, Valentina Bušić, Dajana Gašo-Sokač and Karolina Vrandečić
Appl. Sci. 2025, 15(14), 7889; https://doi.org/10.3390/app15147889 - 15 Jul 2025
Viewed by 229
Abstract
Wheat (Triticum aestivum L.) is a major cereal crop globally, but its production is increasingly threatened by fungal pathogens, particularly Fusarium culmorum (Wm. G. Sm.) Sacc., which causes seedling blight and root rot, leading to yield losses and mycotoxin contamination. Conventional control [...] Read more.
Wheat (Triticum aestivum L.) is a major cereal crop globally, but its production is increasingly threatened by fungal pathogens, particularly Fusarium culmorum (Wm. G. Sm.) Sacc., which causes seedling blight and root rot, leading to yield losses and mycotoxin contamination. Conventional control strategies, such as crop rotation and the use of fungicides, are often inadequate and contribute to the development of resistance, particularly with the overuse of similar modes of action. This study investigated quaternary pyridinium salts—nicotinamide and isonicotinamide derivatives—as potential sustainable antifungal agents. In vivo tests involved treating sterilized wheat seeds grown in sterile sand that had been inoculated with F. culmorum, using compounds previously confirmed to be active in vitro. Disease index, shoot and root length, and fresh and dry biomass were measured. Among the tested compounds, nicotinamide derivatives (2) and (3) showed the lowest disease index (0.9) at a concentration of 10 µg/mL. Most compounds promoted plant and root growth. Isonicotinamide derivatives (6) and (7) at 100 µg/mL increased root dry weight, while compound (6) at 10 µg/mL resulted in the most significant increase in plant length. These findings highlight the dual antifungal and growth-promoting potential of certain eco-friendly derivatives for managing F. culmorum and supporting wheat seedling development. Full article
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30 pages, 4836 KiB  
Article
Evaluation of Stress-Tolerant Serratia and Enterobacter as PGPR for Nutrient Solubilization and Dose-Dependent Bioformulation to Enhance Tomato Seedlings
by Indu Bhardwaj, Vijay Kumar, Somvir Singh, Arti Jamwal Sharma, Shikha Kumari, Nidhi Bhardwaj, Kanika Dulta, Lukas Peter, Richa Verma, Nitesh Kumar, Yogesh K. Ahlawat, Anurag Malik, Mohammad K. Okla, Rosa Porcel, José M. Mulet and Karthikeyan Jayabalan
Plants 2025, 14(14), 2154; https://doi.org/10.3390/plants14142154 - 13 Jul 2025
Viewed by 442
Abstract
Plant growth-promoting rhizobacteria (PGPR) are eco-friendly and sustainable options for agrochemicals, particularly for enhancing crop productivity under stress conditions. The present research aims to isolate and characterize native PGPR from tomato rhizospheric soil and to evaluate their effectiveness as a dose-dependent response to [...] Read more.
Plant growth-promoting rhizobacteria (PGPR) are eco-friendly and sustainable options for agrochemicals, particularly for enhancing crop productivity under stress conditions. The present research aims to isolate and characterize native PGPR from tomato rhizospheric soil and to evaluate their effectiveness as a dose-dependent response to enhance the growth of tomato seedlings. Out of 112 isolates, 10 bacterial strains were selected based on key PGPR traits, including indole-3-acetic acid (IAA), ammonia production, hydrogen cyanide (HCN), exopolysaccharide (EPS) synthesis, hydrolytic enzyme activity, potassium solubilization, antifungal activity against Fusarium oxysporum, and tolerance to pH and heat stress. Molecular identification via 16S rRNA gene sequencing confirmed that these isolates belong to the genera Serratia and Enterobacter. S. marcescens So-1 and Enterobacter sp. So-12 produced the highest levels of IAA (2.6–24.1 µg/mL). In vitro tomato seed germination tests using bacterial suspensions at three concentrations (106, 107, and 108 CFU/mL) showed dose-dependent improvements, with T1 increasing germination up to 108.3% compared to the control. In polyhouse trials using cocopeat formulations, seedling growth improved noticeably. T2 increased the root length (28.3 ± 2.98 cm) by over 1560%, and the shoot length (35.7 ± 0.57 cm) increased by 55% against the control, whose root length is 1.7 ± 0.47. The chlorophyll amount of the treated leaves further showed significant results over the control. Collectively, these findings suggest that using native PGPR in a dose-dependent way can help tomato seedlings grow better and promote more sustainable crop production. Full article
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24 pages, 4352 KiB  
Article
Tissue-Specific Expression Analysis and Functional Validation of SiSCR Genes in Foxtail Millet (Setaria italica) Under Hormone and Drought Stresses, and Heterologous Expression in Arabidopsis
by Yingying Qin, Ruifu Wang, Shuwan Chen, Qian Gao, Yiru Zhao, Shuo Chang, Mao Li, Fangfang Ma and Xuemei Ren
Plants 2025, 14(14), 2151; https://doi.org/10.3390/plants14142151 - 11 Jul 2025
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Abstract
The SCARECROW (SCR) transcription factor governs cell-type patterning in plant roots and Kranz anatomy of leaves, serving as a master regulator of root and shoot morphogenesis. Foxtail millet (Setaria italica), characterized by a compact genome, self-pollination, and a short growth cycle, [...] Read more.
The SCARECROW (SCR) transcription factor governs cell-type patterning in plant roots and Kranz anatomy of leaves, serving as a master regulator of root and shoot morphogenesis. Foxtail millet (Setaria italica), characterized by a compact genome, self-pollination, and a short growth cycle, has emerged as a C4 model plant. Here, we revealed two SCR paralogs in foxtail millet—SiSCR1 and SiSCR2—which exhibit high sequence conservation with ZmSCR1/1h (Zea mays), OsSCR1/2 (Oryza sativa), and AtSCR (Arabidopsis thaliana), particularly within the C-terminal GRAS domain. Both SiSCR genes exhibited nearly identical secondary structures and physicochemical profiles, with promoter analyses revealing five conserved cis-regulatory elements. Robust phylogenetic reconstruction resolved SCR orthologs into monocot- and dicot-specific clades, with SiSCR genes forming a sister branch to SvSCR from its progenitor species Setaria viridis. Spatiotemporal expression profiling demonstrated ubiquitous SiSCR gene transcription across developmental stages, with notable enrichment in germinated seeds, plants at the one-tip-two-leaf stage, leaf 1 (two days after heading), and roots during the seedling stage. Co-expression network analysis revealed that there is a correlation between SiSCR genes and other functional genes. Abscisic acid (ABA) treatment led to a significant downregulation of the expression level of SiSCR genes in Yugu1 roots, and the expression of the SiSCR genes in the roots of An04 is more sensitive to PEG6000 treatment. Drought treatment significantly upregulated SiSCR2 expression in leaves, demonstrating its pivotal role in plant adaptation to abiotic stress. Analysis of heterologous expression under the control of the 35S promoter revealed that SiSCR genes were expressed in root cortical/endodermal initial cells, endodermal cells, cortical cells, and leaf stomatal complexes. Strikingly, ectopic expression of SiSCR genes in Arabidopsis led to hypersensitivity to ABA, and ABA treatment resulted in a significant reduction in the length of the meristematic zone. These data delineate the functional divergence and evolutionary conservation of SiSCR genes, providing critical insights into their roles in root/shoot development and abiotic stress signaling in foxtail millet. Full article
(This article belongs to the Section Plant Molecular Biology)
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