Search Results (23)

Tubastraea coccinea and T. tagusensis, commonly known as sun corals, are two species of stony corals (Scleractinia, Dendrophylliidae) native to the Indo-Pacific region (T. coccinea) and the Galapagos Islands (T. tagusensis), respectively. They are considered highly invasive species, particularly in the Western Atlantic Ocean, due to high adaptability to various ecological conditions and notable resilience. Given their demonstrated invasiveness, it is important to delve into their physiology and the molecular bases supporting their resilience. However, to date, only a few molecular tools are available for the study of these organisms. The primary objective of the present study was the development of an efficient RNA extraction protocol for Tubastraea coccinea and T.a tagusensis samples collected off Ilha Grande Bay, Rio de Janeiro (Brazil). The quantity of isolated RNA was evaluated using NanoDrop, while its purity and quality were determined by evaluating the A260/A280 and A260/230 ratios. Subsequently, based on genes known for T. coccinea, two housekeeping genes and seven stress response-related genes were isolated and characterized, for the first time for both species, using a molecular approach. An interactomic analysis was also conducted, which revealed functional interactions among these genes. This study represents the first report on gene networks in Tubastraea spp., opening new perspectives for understanding the chemical ecology and the cellular mechanisms underlying the invasiveness of these species. The results obtained will be useful for ecological conservation purposes, contributing to the formulation of strategies to limit their further expansion. Full article

Microplastics are pervasive in marine ecosystems and have been shown to affect a range of marine organisms, including corals. These particles can develop biofilms, facilitating the transport of pollutants and pathogenic microorganisms. Although the effects of primary microplastics on adult corals have been extensively studied, little is known about the impacts of secondary microplastics on early life stages. This study investigated (1) the effects of different abundances of secondary microplastics on the early development of Orbicella faveolata; (2) the influence of fibers and fragments on the larval settlement of Acropora palmata; and (3) the effects of the microplastic size, abundance, and biofilm presence on the settlement of Favia fragum. For O. faveolata, fertilization, embryogenesis, and settlement were all impaired by fragments, with embryonic development showing a 25.9% reduction in viability. Larval development was unaffected, but post-settlement survival declined by 35.8% with exposure to fibers and fragments. For A. palmata, settlement was reduced by fragments, while for F. fragum, only 2–4 mm fragments significantly decreased settlement rates. This study contributes to the knowledge of the effect of microplastics on the early development of corals, providing valuable information to improve strategies to control microplastic pollution. Full article

Background: The Merulinidae family belonging to the order Scleractinia is mainly distributed in the Indo-Pacific and Caribbean regions and often constitute the most dominant species of coral reefs. Mitochondrial genome is a key tool for studying the phylogeny and adaptation. Only a few studies have conducted the characteristics analyses of mitochondrial genome in the Merulinidae family. Methods: Therefore, we used high-throughput sequencing technology to describe the mitochondrial genome of Platygyra daedalea, a member of this family. Bioinformatics was used to analyze the composition characteristics of the mitochondrial genome of 10 Merulinidae species. Results: The mitochondrial genome of P. daedalea had a total length of 16,462 bp and a GC content of 33.0%. Thirteen unique protein-coding genes (PCGs), two transfer RNA (tRNA) genes, and two ribosomal RNA (rRNA) genes were annotated. Each species of Merulinidae had 13 unique PCGs in the mitochondrial genome. In contrast, the number of tRNAs and rRNAs significantly varied in Merulinidae species. Collinearity and gene rearrangement analyses indicated that the mitochondrial evolution of species in the Merulinidae family was relatively conserved. Divergence time analysis indicated that Merulinidae originated in the Oligocene, whereas the Platygyra genus originated in the Miocene. The formation and intraspecific divergence of coral species were consistent with geological changes in the ocean. Conclusions: The results of this study help better understand the characteristics of the mitochondrial genome in the Merulinidae family and provide insights into the utility of mitochondrial genes as molecular markers of phylogeny. Full article

Coral-dwelling gall crabs (Cryptochiridae) are common inhabitants of scleractinian corals. Several species have been described as new in recent years, including Lithoscaptus doughnut, which was described from Hong Kong based on a single female retrieved from the coral Plesiastrea peroni. Here we extend the distribution range of L. doughnut with nine additional localities throughout the Indo-West Pacific, from the Red Sea to the Coral Triangle and Japan. We describe a male specimen of L. doughnut for the first time, based on a specimen from Malaysia, and provide photographs of life and preserved material. Haplotype networks based on COI mtDNA (n = 12) and 16 rRNA sequences (n = 12) were created. We retrieved eleven COI haplotypes and six 16S haplotypes, however no clear geographic distribution pattern was discerned. Intraspecific variation in L. doughnut was 1.4% for COI and 0.2% for 16S. Lastly, the first colour photos and records of associated parasites of this species are provided. Full article

Coral reefs are globally declining due to various anthropogenic stressors. Amongst those, chemical pollutants, such as pesticides from agricultural runoff, sewage or an overabundance of personal care products in coastal waters due to intense tourism, may be considered as a local stressor for reef-building corals. The extent to which such chemicals exhibit toxic effects towards corals at environmentally relevant concentrations is currently controversially discussed and existing studies are often based on varying and sometimes deficient test methods. To address this uncertainty, we adapted available methods into a reliable and comprehensive acute coral toxicity test method for the reef-building coral Montipora digitata. The toxicities of the four substances benzophenone-3 (BP-3), Diuron (DCMU), copper (Cu²⁺ as CuCl₂, positive control) and dimethylformamide (DMF, solvent) were assessed in a 96 h semi-static test design. Endpoints such as maximum quantum yield, bleaching, tissue loss and mortality were evaluated with respect to their suitability for regulatory purposes. Overall, the endpoints bleaching and mortality yielded sensitive and robust results for the four tested substances. As the test method follows the principles of internationally standardized testing methods (ISO, OECD), it can be considered suitable for further validation and standardization. Once validated, a standardized test method will help to obtain reproducible toxicity results useful for marine hazard and risk assessment and regulatory decision making. Full article

Intervention techniques to restore coral communities have become an important management tool to help recover and rehabilitate damaged reefs. The direct transplantation of healthy coral fragments is the most common method; however, there is controversy in the long-term success, as using coral clones may diminish the genetic diversity of the coral population. Genetic recombination can be achieved when the coral colony produces gametes and eventually reproduces; therefore, it is important to provide evidence that restored colonies produce gametes as their naturally recruited counterparts with similar colony size (age). Natural and restored Pocillopora coral colonies of the same size range (between 40 and 50 cm in diameter) were tagged and sampled during the rainy season to determine gamete maturation. Our results show no differences in the reproductive activity among colonies: natural and restored coral colonies matured gametes from June to October, with a peak in sexually active coral colonies in July. Also, gamete malformation was not observed. During the gamete production period, the area’s temperature ranged from 27.9 to 30.02 °C. The results’ evidence that coral colonies formed through active restoration contribute not only to the increase in live coral cover as seen in previous studies but potentially contribute in the medium term (>5 years after out-planting) to the production of larvae and local and subsidiary recruitment, since they exhibit the same reproductive patterns as their naturally formed counterparts and no differences in the reproductive activity among coral colonies. Therefore, long-term coral restoration projects contribute to maintaining the live coral cover and the genetic diversity in the region, eventually rehabilitating the coral community. Full article

A new species of gall crab collected from elegance coral, Catalaphyllia jardinei, is described in this paper. The male holotype was collected from a reef tank in Germany in 2016, and it is described here using integrative taxonomy. This species, named Lithoscaptus aquarius sp. nov., is the thirteenth assigned to the genus. It is morphologically and phylogenetically closest to Lithoscaptus semperi, a cryptochirid associated with Trachyphyllia geoffroyi. Like L. semperi, it has a large, broad W-shaped depression on the anterior half of the carapace, but the carapace surface of L. aquarius sp. nov. is smooth overall, lacking spines or tubercles. This new species is so named because it was found in a reef tank after searching in vain for material during fieldwork campaigns over the course of several years. Full article

Coral mortality is a global phenomenon of increasing magnitude, correlated with climate change. Prolonged marine heatwaves have particularly affected the north Aegean Sea in summer 2021, threatening shallow-water stony corals, such as Balanophyllia europaea and Cladocora caespitosa. To assess their population status, ten coastal, rocky-bottom stations dispersed in Natura 2000 sites of Chalkidiki (north Aegean) were surveyed using non-destructive techniques in autumn 2021. At each station, corals’ abundance was estimated in situ, by counting the number of B. europaea polyps within randomly placed 50 × 50 cm quadrats, and the number of C. caespitosa colonies along three replicate belt transects 1 × 10 m. The status of corals was qualitatively assigned as healthy, bleached (partially or complete), or in necrosis (partial or complete). B. europaea was found in 80% of stations; in total, 58.17% of the coral specimens were affected by necrosis. C. caespitosa was found in 30% of stations; in total, 27.49% of the coral colonies were partially bleached and 11.32% in necrosis. Another nine sessile invertebrates (sponges, bivalves, and ascidians) were observed in necrosis. These results highlight the need to establish monitoring programs on vulnerable sessile invertebrate populations along the Aegean Sea to assess climate change impacts. Full article

Reef-building coral species of the order Scleractinia play an important role in shallow tropical seas by providing an environmental base for the ecosystem. The molecular data of complete mitochondrial genome have become an important source for evaluating phylogenetic and evolutionary studies of Scleractinia. Here, the complete mitogenome of Homophyllia bowerbanki (Milne Edwards and Haime, 1857), collected from Nansha Islands of the South China Sea, was sequenced for the first time through a next-generation sequencing method. H. bowerbanki is the first species of its genus for which the mitogenome was sequenced. This mitogenome was 18,154 bp in size and included two transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), and two ribosomal RNA genes (rRNAs). It showed a similar gene structure and gene order to the other typical scleractinians. All 17 genes were encoded on the H strand and the total GC content was 33.86% in mitogenome. Phylogenetic analysis (maximum likelihood tree method) showed that H. bowerbanki belonged to the “Robust” clade and clustered together with other two species in the family Lobophylliidae based on 13 PCGs. The mitogenome can provide significant molecular information to clarify the evolutionary and phylogenetic relationships between stony corals and to facilitate their taxonomic classification; it can also support coral species monitoring and conservation efforts. Full article

Reefal limestones of the Štramberk Carbonate Platform are preserved as olistoliths and pebbles in deep-water flysch of the Outer Carpathians (Czech Republic, Poland). They contain the richest coral assemblages of the Jurassic/Cretaceous transition (Tithonian–Berriasian). Symbiotic associations between corals and tube-dwelling macroorganisms were recognized only in the branching scleractinian corals Calamophylliopsis flabellum and Calamophylliopsis sp. One to seven calcareous tubes were recognized either in coral calyces, embedded in the wall, or attached to it. Two types of tubes were recognized: Type 1: tubes with a diameter of 0.3–0.6 mm and a very thin wall (ca. 0.05 mm), mostly occurring inside corallites, and nearly exclusively in the Štramberk-type limestone of Poland; Type 2: tubes with an outer diameter of 0.8–2.0 mm and a thick wall (ca. 0.1 mm, some even up to 0.2 mm), mostly found in the Štramberk Limestone of the Czech Republic. Growth lamellae were observed in some thick walls. Most tubes are almost straight, some are curved. The tubes were probably produced by serpulids or by embedment of organic-walled sabellid polychaete worms. It is likely the oldest record of a sabellid–coral association. Modification of the coral skeleton in contact with tubes indicates that the worms were associated with live corals. For many modern and fossil worm–coral associations, this symbiotic association is interpreted as mutualistic or commensal. Full article

The Red Sea is a suitable model for studying coral reefs under climate change due to its strong environmental gradient that provides a window into future global warming scenarios. For instance, corals in the southern Red Sea thrive at temperatures predicted to occur at the end of the century in other biogeographic regions. Corals in the Red Sea thrive under contrasting thermal and environmental regimes along their latitudinal gradient. Because microbial communities associated with corals contribute to host physiology, we conducted a systematic review of the known diversity of Red Sea coral-associated bacteria, considering geographic location and host species. Our assessment comprises 54 studies of 67 coral host species employing cultivation-dependent and cultivation-independent techniques. Most studies have been conducted in the central and northern Red Sea, while the southern and western regions remain largely unexplored. Our data also show that, despite the high diversity of corals in the Red Sea, the most studied corals were Pocillopora verrucosa, Dipsastraea spp., Pleuractis granulosa, and Stylophora pistillata. Microbial diversity was dominated by bacteria from the class Gammaproteobacteria, while the most frequently occurring bacterial families included Rhodobacteraceae and Vibrionaceae. We also identified bacterial families exclusively associated with each of the studied coral orders: Scleractinia (n = 125), Alcyonacea (n = 7), and Capitata (n = 2). This review encompasses 20 years of research in the Red Sea, providing a baseline compendium for coral-associated bacterial diversity. Full article

Life-history strategies play a critical role in susceptibility to environmental stresses for Scleractinia coral. Metabolomics, which is capable of determining the metabolic responses of biological systems to genetic and environmental changes, is competent for the characterization of species’ biological traits. In this study, two coral species (Pocillopora meandrina and Seriatopora hystrix in the South China Sea) with different life-history strategies (“competitive” and “weedy”) were targeted, and untargeted mass spectrometry metabolomics combined with molecular networking was applied to characterize their differential metabolic pathways. The results show that lyso-platelet activating factors (lyso-PAFs), diacylglyceryl carboxyhydroxymethylcholine (DGCC), aromatic amino acids, and sulfhydryl compounds were more enriched in P. meandrina, whereas new phospholipids, dehydrated phosphoglycerol dihydroceramide (de-PG DHC), monoacylglycerol (MAG), fatty acids (FA) (C < 18), short peptides, and guanidine compounds were more enriched in S. hystrix. The metabolic pathways involved immune response, energy metabolism, cellular membrane structure regulation, oxidative stress system, secondary metabolite synthesis, etc. While the immune system (lysoPAF) and secondary metabolite synthesis (aromatic amino acids and sulfhydryl compounds) facilitates fast growth and resistance to environmental stressors of P. meandrina, the cell membrane structure (structural lipids), energy storage (storage lipids), oxidative stress system (short peptides), and secondary metabolite synthesis (guanidine compounds) are beneficial to the survival of S. hystrix in harsh conditions. This study contributes to the understanding of the potential molecular traits underlying life-history strategies of different coral species. Full article

Duncanopsammia axifuga (Scleractinia: Dendrophylliidae) is reported for the first time from Indonesia. A population was found in 5-m deep, murky water on a sediment-rich, inshore reef at Bird’s Head Peninsula, West Papua. Some corals were attached to dead coral and others were loose fragments living on sediment. One attached specimen was observed to be damaged as a result of direct contact with an adjacent Goniopora coral. Free-living specimens on sand are more likely able to escape competition for space. These observations may help to better understand the northernmost range limit and the natural environment of D. axifuga, a species that is popular in the international aquarium trade, but has not been studied very well in the field. Full article

Some coral-associated invertebrates are known for the negative impact they have on the health of their hosts. During biodiversity surveys on the coral reefs of Curaçao and a study of photo archives of Curaçao, Bonaire, and St. Eustatius, the Caribbean split-crown feather duster worm Anamobaea sp. (Sabellidae) was discovered as an associate of 27 stony coral species (Scleractinia spp. and Millepora spp.). The worm was also found in association with an encrusting octocoral (Erythropodium caribaeorum), a colonial tunicate (Trididemnum solidum), various sponge species, and thallose algae (mainly Lobophora sp.), each hypothesized to be secondary hosts. The worms were also common on dead coral. Sabellids of the genera Bispira and Sabellastarte were all found on dead coral. Some of them appeared to have settled next to live corals or on patches of dead coral skeleton surrounded by living coral tissue, forming pseudo-associations. Associated Anamobaea worms can cause distinct injuries in most host coral species and morphological deformities in a few of them. Since Anamobaea worms can form high densities, they have the potential to become a pest species on Caribbean coral reefs when environmental conditions become more favorable for them. Full article

The presence of associated endofauna can have an impact on the health of corals. During fieldwork on the southern Caribbean island of Curaçao in 2021, the presence of an unknown coral-dwelling worm snail was discovered, which appeared to cause damage to its hosts. A study of photo archives revealed that the species was already present during earlier surveys at Curaçao since 2014 and also in the southern Caribbean island of Bonaire in 2019. It was not found in St. Eustatius, an island in the eastern Caribbean, during an expedition in 2015. The vermetid snail was preliminarily identified as Petaloconchus sp. Its habitat choice resembles that of P. keenae, a West Pacific coral symbiont. The Caribbean species was observed in 21 host coral species, more than reported for any other vermetid. Because Petaloconchus sp. is a habitat generalist, it is possible that it was introduced from an area with another host-coral fauna. The unknown vermetid is considered to be cryptogenic until future studies reveal its actual identity and its native range. Full article