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156,461 Results Found

  • Article
  • Open Access
9 Citations
4,895 Views
16 Pages

Identification of Binding Proteins for TSC22D1 Family Proteins Using Mass Spectrometry

  • Ryouta Kamimura,
  • Daisuke Uchida,
  • Shin-ichiro Kanno,
  • Ryo Shiraishi,
  • Toshiki Hyodo,
  • Yuta Sawatani,
  • Michiko Shimura,
  • Tomonori Hasegawa,
  • Maki Tsubura-Okubo and
  • Erika Yaguchi
  • + 6 authors

9 October 2021

TSC-22 (TGF-β stimulated clone-22) has been reported to induce differentiation, growth inhibition, and apoptosis in various cells. TSC-22 is a member of a family in which many proteins are produced from four different family genes. TSC-22 (correspond...

  • Article
  • Open Access
17 Citations
9,458 Views
13 Pages

Proteins and Minerals in Whey Protein Supplements

  • Dailos González-Weller,
  • Soraya Paz-Montelongo,
  • Elena Bethencourt-Barbuzano,
  • Daniel Niebla-Canelo,
  • Samuel Alejandro-Vega,
  • Ángel J. Gutiérrez,
  • Arturo Hardisson,
  • Conrado Carrascosa and
  • Carmen Rubio

1 June 2023

Sports nutrition supplementation is a widespread practice. Whey protein supplements contribute not only to protein intake but also to dietary exposure to minerals. The labelling present provides the percentage of protein and rarely refers to other co...

  • Article
  • Open Access
19 Citations
5,733 Views
15 Pages

Pea Proteins Have Anabolic Effects Comparable to Milk Proteins on Whole Body Protein Retention and Muscle Protein Metabolism in Old Rats

  • Jérôme Salles,
  • Christelle Guillet,
  • Olivier Le Bacquer,
  • Carmen Malnero-Fernandez,
  • Christophe Giraudet,
  • Véronique Patrac,
  • Alexandre Berry,
  • Philippe Denis,
  • Corinne Pouyet and
  • Marine Gueugneau
  • + 3 authors

25 November 2021

Plant proteins are attracting rising interest due to their pro-health benefits and environmental sustainability. However, little is known about the nutritional value of pea proteins when consumed by older people. Herein, we evaluated the digestibilit...

  • Review
  • Open Access
50 Citations
10,677 Views
13 Pages

Literature from the past two decades has outlined the existence of a trade-off between protein stability and function. This trade-off creates a unique challenge for protein engineers who seek to introduce new functionality to proteins. These engineer...

  • Article
  • Open Access
24 Citations
7,667 Views
18 Pages

Network of Interactions between ZIKA Virus Non-Structural Proteins and Human Host Proteins

  • Volha A. Golubeva,
  • Thales C. Nepomuceno,
  • Giuliana de Gregoriis,
  • Rafael D. Mesquita,
  • Xueli Li,
  • Sweta Dash,
  • Patrícia P. Garcez,
  • Guilherme Suarez-Kurtz,
  • Victoria Izumi and
  • John Koomen
  • + 2 authors

8 January 2020

The Zika virus (ZIKV) is a mosquito-borne Flavivirus and can be transmitted through an infected mosquito bite or through human-to-human interaction by sexual activity, blood transfusion, breastfeeding, or perinatal exposure. After the 2015–2016...

  • Review
  • Open Access
4 Citations
2,985 Views
17 Pages

Repair of Iron Center Proteins—A Different Class of Hemerythrin-like Proteins

  • Liliana S. O. Silva,
  • Pedro M. Matias,
  • Célia V. Romão and
  • Lígia M. Saraiva

23 June 2022

Repair of Iron Center proteins (RIC) form a family of di-iron proteins that are widely spread in the microbial world. RICs contain a binuclear nonheme iron site in a four-helix bundle fold, two basic features of hemerythrin-like proteins. In this wor...

  • Review
  • Open Access
10 Citations
8,965 Views
11 Pages

Dietary Proteins and Angiogenesis

  • Miguel Ángel Medina and
  • Ana R. Quesada

17 January 2014

Both defective and persistent angiogenesis are linked to pathological situations in the adult. Compounds able to modulate angiogenesis have a potential value for the treatment of such pathologies. Several small molecules present in the diet have been...

  • Review
  • Open Access
306 Citations
25,734 Views
23 Pages

Functional Performance of Plant Proteins

  • Kai Kai Ma,
  • Maija Greis,
  • Jiakai Lu,
  • Alissa A. Nolden,
  • David Julian McClements and
  • Amanda J. Kinchla

18 February 2022

Increasingly, consumers are moving towards a more plant-based diet. However, some consumers are avoiding common plant proteins such as soy and gluten due to their potential allergenicity. Therefore, alternative protein sources are being explored as f...

  • Communication
  • Open Access
2 Citations
1,526 Views
9 Pages

Atlas of Interactions Between Decoration Proteins and Major Capsid Proteins of Coliphage N4

  • Klem McJarrow-Keller,
  • Alice-Roza Eruera,
  • Alexander J. M. Crowe,
  • Rosheny Kumaran,
  • Jaekyung Hyun and
  • Mihnea Bostina

26 December 2024

Coliphage N4 is a representative species of the Schitoviridae family of bacteriophages. Originally structurally studied in 2008, the capsid structure was solved to 14 Å to reveal an interesting arrangement of Ig-like decoration proteins across...

  • Review
  • Open Access
133 Citations
19,491 Views
30 Pages

Intrinsically Disordered Proteins: An Overview

  • Rakesh Trivedi and
  • Hampapathalu Adimurthy Nagarajaram

14 November 2022

Many proteins and protein segments cannot attain a single stable three-dimensional structure under physiological conditions; instead, they adopt multiple interconverting conformational states. Such intrinsically disordered proteins or protein segment...

  • Article
  • Open Access
19 Citations
7,884 Views
20 Pages

Flexible Proteins at the Origin of Life

  • Andrew Pohorille,
  • Michael A. Wilson and
  • Gareth Shannon

5 June 2017

Almost all modern proteins possess well-defined, relatively rigid scaffolds that provide structural preorganization for desired functions. Such scaffolds require the sufficient length of a polypeptide chain and extensive evolutionary optimization. Ho...

  • Article
  • Open Access
10 Citations
3,008 Views
12 Pages

Abscisic acid (ABA) and gibberellic acid (GA) antagonistically regulate many aspects of plant growth, including seed dormancy and germination. The effects of these hormones are mediated by a complex network of positive and negative regulators of tran...

  • Review
  • Open Access
21 Citations
5,503 Views
27 Pages

8 January 2021

Ribosomal proteins (RPs) are mostly derived from the energy-consuming enzyme families such as ATP-dependent RNA helicases, AAA-ATPases, GTPases and kinases, and are important structural components of the ribosome, which is a supramolecular ribonucleo...

  • Review
  • Open Access
66 Citations
9,761 Views
23 Pages

1 November 2017

Plants have evolved a variety of defense mechanisms to tackle virus attack. Endogenous plant proteins can function as virus suppressors. Different types of proteins mediate defense responses against plant viruses. Pathogenesis-related (PR) proteins a...

  • Review
  • Open Access
12 Citations
3,380 Views
18 Pages

Effect of Protein–Protein Interactions on Translational Diffusion of Spheroidal Proteins

  • Aleksandra M. Kusova,
  • Aleksandr E. Sitnitsky,
  • Vladimir N. Uversky and
  • Yuriy F. Zuev

17 August 2022

One of the commonly accepted approaches to estimate protein–protein interactions (PPI) in aqueous solutions is the analysis of their translational diffusion. The present review article observes a phenomenological approach to analyze PPI effects...

  • Communication
  • Open Access
41 Citations
11,357 Views
12 Pages

8 October 2012

Proteins of uncharacterized functions form a large part of many of the currently available biological databases and this situation exists even in the Protein Data Bank (PDB). Our analysis of recent PDB data revealed that only 42.53% of PDB entries (1...

  • Article
  • Open Access
13 Citations
4,304 Views
16 Pages

Configurational Entropy of Folded Proteins and Its Importance for Intrinsically Disordered Proteins

  • Meili Liu,
  • Akshaya K. Das,
  • James Lincoff,
  • Sukanya Sasmal,
  • Sara Y. Cheng,
  • Robert M. Vernon,
  • Julie D. Forman-Kay and
  • Teresa Head-Gordon

Many pairwise additive force fields are in active use for intrinsically disordered proteins (IDPs) and regions (IDRs), some of which modify energetic terms to improve the description of IDPs/IDRs but are largely in disagreement with solution experime...

  • Review
  • Open Access
15 Citations
9,565 Views
25 Pages

1 November 2012

The endoplasmic reticulum (ER) is the site of secretory protein biogenesis. The ER quality control (QC) machinery, including chaperones, ensures the correct folding of secretory proteins. Mutant proteins and environmental stresses can overwhelm the a...

  • Article
  • Open Access
15 Citations
5,554 Views
35 Pages

Intrinsic Disorder in Tetratricopeptide Repeat Proteins

  • Nathan W. Van Bibber,
  • Cornelia Haerle,
  • Roy Khalife,
  • Bin Xue and
  • Vladimir N. Uversky

Among the realm of repeat containing proteins that commonly serve as “scaffolds” promoting protein-protein interactions, there is a family of proteins containing between 2 and 20 tetratricopeptide repeats (TPRs), which are functional moti...

  • Review
  • Open Access
112 Citations
34,110 Views
28 Pages

Seaweeds as a Source of Functional Proteins

  • Punniamoorthy Thiviya,
  • Ashoka Gamage,
  • Nalin Suranjith Gama-Arachchige,
  • Othmane Merah and
  • Terrence Madhujith

11 May 2022

Protein is one of the major macronutrients essential in human nutrition. Protein sources especially animal sourced proteins are expensive, thus much work has been carried out to explore alternative protein sources. Seaweeds, or macroalgae, are emergi...

  • Proceeding Paper
  • Open Access
1,034 Views
4 Pages

Heat shock proteins are named stress proteins or stress molecules due to their secretion being triggered by stress encountered by living beings. Although their primary documented role has been maintaining and regulating protein conformations to reduc...

  • Review
  • Open Access
7 Citations
4,389 Views
13 Pages

Golgi Apparatus Target Proteins in Gastroenterological Cancers: A Comprehensive Review of GOLPH3 and GOLGA Proteins

  • Sandica Bucurica,
  • Laura Gaman,
  • Mariana Jinga,
  • Andrei Adrian Popa and
  • Florentina Ionita-Radu

11 July 2023

The Golgi apparatus plays a central role in protein sorting, modification and trafficking within cells; its dysregulation has been implicated in various cancers including those affecting the GI tract. This review highlights two Golgi target proteins,...

  • Review
  • Open Access
35 Citations
7,043 Views
13 Pages

Challenges in Discovering Drugs That Target the Protein–Protein Interactions of Disordered Proteins

  • Judit Oláh,
  • Tibor Szénási,
  • Attila Lehotzky,
  • Victor Norris and
  • Judit Ovádi

28 January 2022

Protein–protein interactions (PPIs) outnumber proteins and are crucial to many fundamental processes; in consequence, PPIs are associated with several pathological conditions including neurodegeneration and modulating them by drugs constitutes...

  • Review
  • Open Access
15 Citations
13,155 Views
42 Pages

RNA-Binding Proteins in Trichomonas vaginalis: Atypical Multifunctional Proteins

  • Elisa E. Figueroa-Angulo,
  • Jaeson S. Calla-Choque,
  • Maria Inocente Mancilla-Olea and
  • Rossana Arroyo

26 November 2015

Iron homeostasis is highly regulated in vertebrates through a regulatory system mediated by RNA-protein interactions between the iron regulatory proteins (IRPs) that interact with an iron responsive element (IRE) located in certain mRNAs, dubbed the...

  • Review
  • Open Access
12 Citations
3,350 Views
42 Pages

Interaction of Proteins Involved in Neuronal Proteinopathies

  • Konstantin Y. Kulichikhin,
  • Oksana A. Malikova,
  • Anastasia E. Zobnina,
  • Natalia M. Zalutskaya and
  • Aleksandr A. Rubel

23 September 2023

Proteinopathy is characterized by the accumulation of aggregates of a specific protein in a target organ, tissue, or cell. The aggregation of the same protein can cause different pathologies as single protein can adopt various amyloidogenic, disease-...

  • Review
  • Open Access
129 Citations
20,055 Views
21 Pages

17 July 2014

Molecular chaperones were originally discovered as heat shock-induced proteins that facilitate proper folding of proteins with non-native conformations. While the function of chaperones in protein folding has been well documented over the last four d...

  • Review
  • Open Access
176 Citations
17,603 Views
24 Pages

29 November 2019

Tight junctions are complex supramolecular entities composed of integral membrane proteins, membrane-associated and soluble cytoplasmic proteins engaging in an intricate and dynamic system of protein–protein interactions. Three-dimensional stru...

  • Article
  • Open Access
5 Citations
2,807 Views
22 Pages

Systematic Approaches to Study Eclipsed Targeting of Proteins Uncover a New Family of Mitochondrial Proteins

  • Maayan Mark,
  • Ofir Klein,
  • Yu Zhang,
  • Koyeli Das,
  • Adi Elbaz,
  • Reut Noa Hazan,
  • Michal Lichtenstein,
  • Norbert Lehming,
  • Maya Schuldiner and
  • Ophry Pines

5 June 2023

Dual localization or dual targeting refers to the phenomenon by which identical, or almost identical, proteins are localized to two (or more) separate compartments of the cell. From previous work in the field, we had estimated that a third of the mit...

  • Review
  • Open Access
86 Citations
13,505 Views
15 Pages

Cotranslational Folding of Proteins on the Ribosome

  • Marija Liutkute,
  • Ekaterina Samatova and
  • Marina V. Rodnina

7 January 2020

Many proteins in the cell fold cotranslationally within the restricted space of the polypeptide exit tunnel or at the surface of the ribosome. A growing body of evidence suggests that the ribosome can alter the folding trajectory in many different wa...

  • Review
  • Open Access
16 Citations
10,047 Views
29 Pages

8 June 2012

Helicobacter pylori (H. pylori) have a unique ability to survive in extreme acidic environments and to colonize the gastric mucosa. It can cause diverse gastric diseases such as peptic ulcers, chronic gastritis, mucosa-associated lymphoid tissue (MAL...

  • Review
  • Open Access
17 Citations
10,095 Views
29 Pages

Photoaffinity Labeling of Plasma Proteins

  • Victor Tuan Giam Chuang and
  • Masaki Otagiri

8 November 2013

Photoaffinity labeling is a powerful technique for identifying a target protein. A high degree of labeling specificity can be achieved with this method in comparison to chemical labeling. Human serum albumin (HSA) and α1-acid glycoprotein (AGP) are t...

  • Article
  • Open Access
5 Citations
4,976 Views
23 Pages

Towards Sustainable Protein Sources: The Thermal and Rheological Properties of Alternative Proteins

  • Kaitlyn Burghardt,
  • Tierney Craven,
  • Nabil A. Sardar and
  • Joshua M. Pearce

31 January 2024

Reducing meat consumption reduces carbon emissions and other environmental harms. Unfortunately, commercial plant-based meat substitutes have not seen widespread adoption. In order to enable more flexible processing methods, this paper analyzes the c...

  • Review
  • Open Access
31 Citations
15,771 Views
22 Pages

7 June 2021

Adequate dietary protein is important for many aspects of health with current evidence suggesting that exercising individuals need greater amounts of protein. When assessing protein quality, animal sources of protein routinely rank amongst the highes...

  • Review
  • Open Access
73 Citations
10,840 Views
18 Pages

12 February 2015

In eukaryotic cells, mitochondria host ancient essential bioenergetic and biosynthetic pathways. LYR (leucine/tyrosine/arginine) motif proteins (LYRMs) of the Complex1_LYR-like superfamily interact with protein complexes of bacterial origin. Many LY...

  • Perspective
  • Open Access
37 Citations
8,647 Views
10 Pages

The Incomplete Puzzle of the BCL2 Proteins

  • Hector Flores-Romero and
  • Ana J. García-Sáez

29 September 2019

The proteins of the BCL2 family are key players in multiple cellular processes, chief amongst them being the regulation of mitochondrial integrity and apoptotic cell death. These proteins establish an intricate interaction network that expands both t...

  • Review
  • Open Access
9 Citations
4,598 Views
19 Pages

25 July 2020

Protein–protein assemblies are highly prevalent in all living cells. Considerable evidence has recently accumulated suggesting that particularly transient association/dissociation of proteins represent an important means of regulation of metabolism....

  • Article
  • Open Access
3 Citations
3,906 Views
13 Pages

Entropy, Fluctuations, and Disordered Proteins

  • Eshel Faraggi,
  • A. Keith Dunker,
  • Robert L. Jernigan and
  • Andrzej Kloczkowski

6 August 2019

Entropy should directly reflect the extent of disorder in proteins. By clustering structurally related proteins and studying the multiple-sequence-alignment of the sequences of these clusters, we were able to link between sequence, structure, and dis...

  • Article
  • Open Access
5 Citations
2,983 Views
13 Pages

Characterization of Host Cell Potential Proteins Interacting with OsHV-1 Membrane Proteins

  • Jiangnan Yu,
  • Ying Liu,
  • Bowen Huang,
  • Chen Li,
  • Dandan Wang,
  • Mengli Yao,
  • Lusheng Xin,
  • Changming Bai and
  • Chongming Wang

15 December 2021

The interaction between viral membrane associate proteins and host cellular surface molecules should facilitate the attachment and entry of OsHV-1 into host cells. Thus, blocking the putative membrane proteins ORF25 and ORF72 of OsHV-1 with antibodie...

  • Article
  • Open Access
1 Citations
4,086 Views
12 Pages

11 June 2023

INDETERMINATE DOMAIN (IDD) proteins are plant-specific transcription factors that interact with GRAS proteins, such as DELLA and SHORT ROOT (SHR), to regulate target genes. The combination of IDD and DELLA proteins regulates genes involved in gibbere...

  • Review
  • Open Access
7 Citations
5,038 Views
17 Pages

Solution NMR spectroscopy is a unique and powerful technique that has the ability to directly connect the structural dynamics of proteins in physiological conditions to their activity and function. Here, we summarize recent studies in which solution...

  • Commentary
  • Open Access
1 Citations
1,058 Views
6 Pages

A Novel Approach to Relocate Misplaced Proteins in Cells

  • Grace Hohman,
  • Ava Watson and
  • Mohamed A. Eldeeb

14 April 2025

Proper cellular function hinges on appropriate subcellular protein localization. When cellular proteins become mislocalized, they can accumulate, cause cellular damage, and disrupt many biochemical and cellular processes. Notably, mislocalized protei...

  • Review
  • Open Access
47 Citations
6,228 Views
41 Pages

28 June 2021

Nanoparticles from plant proteins are preferred over carbohydrates and synthetic polymeric-based materials for food, medical and other applications. In addition to their large availability and relatively low cost, plant proteins offer higher possibil...

  • Article
  • Open Access
18 Citations
6,100 Views
17 Pages

Ribosome Inactivating Proteins from Rosaceae

  • Chenjing Shang,
  • Pierre Rougé and
  • Els J. M. Van Damme

22 August 2016

Ribosome-inactivating proteins (RIPs) are widespread among higher plants of different taxonomic orders. In this study, we report on the RIP sequences found in the genome/transcriptome of several important Rosaceae species, including many economically...

  • Article
  • Open Access
10 Citations
5,193 Views
16 Pages

How Similar Are Proteins and Origami?

  • Hay Azulay,
  • Aviv Lutaty and
  • Nir Qvit

21 April 2022

Protein folding and structural biology are highly active disciplines that combine basic research in various fields, including biology, chemistry, physics, and computer science, with practical applications in biomedicine and nanotechnology. However, t...

  • Review
  • Open Access
37 Citations
11,394 Views
21 Pages

Seaweed Proteins: A Step towards Sustainability?

  • Leonel Pereira,
  • João Cotas and
  • Ana Marta Gonçalves

10 April 2024

This review delves into the burgeoning field of seaweed proteins as promising alternative sources of protein. With global demand escalating and concerns over traditional protein sources’ sustainability and ethics, seaweed emerges as a viable solution...

  • Review
  • Open Access
22 Citations
6,353 Views
19 Pages

Heat Shock Proteins and Breast Cancer

  • Miao Zhang and
  • Xiaowen Bi

Heat shock proteins (Hsps) are a group of stress-induced proteins involved in protein folding and maturation. Based on their molecular weight, Hsps can be divided into six families: small Hsps, Hsp40, Hsp60, Hsp70, Hsp90, and large Hsps. In the proce...

  • Article
  • Open Access
2 Citations
2,320 Views
16 Pages

10 August 2021

The NSs protein and the nucleocapsid protein (NP) of orthotospoviruses are the major targets for serological detection and diagnosis. A common epitope of KFTMHNQIF in the NSs proteins of Asia orthotospoviruses has been applied as an epitope tag (nss-...

  • Brief Report
  • Open Access
726 Views
11 Pages

Moonlighting Proteins: Some Hypotheses on the Structural Origin of Their Multifunctionality

  • Juan Cedano,
  • Mario Huerta,
  • Angel Mozo-Villarias and
  • Enrique Querol

24 October 2025

Moonlighting proteins—single polypeptides performing multiple, often unrelated functions—are increasingly recognized as key players in human disease and microbial pathogenesis, making their identification crucial for understanding disease...

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