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Keywords = photofragmentation

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18 pages, 2185 KB  
Article
Halogen Migration in the Photofragmentation of Halothane
by Anna Rita Casavola, Filippo Morini, Mattea Carmen Castrovilli, Jacopo Chiarinelli, Laura Carlini, Antonella Cartoni, Daniele Catone, Paola Bolognesi, Robert Richter, Bratislav Marinkovic, Sanja Tosic and Lorenzo Avaldi
Molecules 2025, 30(14), 2902; https://doi.org/10.3390/molecules30142902 - 9 Jul 2025
Viewed by 870
Abstract
The photofragmentation of halothane (CF3CHBrCl) was studied with synchrotron radiation by photoionization efficiency (PIE) measurements and photoelectron–photoion coincidence (PEPICO) experiments, as well as by a theoretical exploration of potential energy surfaces. Among the other fragments, the formation of the CHClF+ [...] Read more.
The photofragmentation of halothane (CF3CHBrCl) was studied with synchrotron radiation by photoionization efficiency (PIE) measurements and photoelectron–photoion coincidence (PEPICO) experiments, as well as by a theoretical exploration of potential energy surfaces. Among the other fragments, the formation of the CHClF+ and CHBrF+ ions, which involves the transfer of a F atom between the two moieties of the parent molecule, was observed. To understand the mechanisms leading to the halogen migration, a detailed theoretical study of the production of CHClF+, m/z 67+, based on DFT calculations and natural bond orbital (NBO) analysis was conducted. The results contribute to the understanding of the photochemistry of halothane, its polluting behavior in the high atmosphere, and the formation of highly reactive species. Full article
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14 pages, 29443 KB  
Article
Resonant Inner-Shell Photofragmentation of Adamantane (C10H16)
by Smita Ganguly, Mathieu Gisselbrecht, Per Eng-Johnsson, Raimund Feifel, Sergio Díaz-Tendero, Eva Muchová, Aleksandar R. Milosavljević, Patrick Rousseau and Sylvain Maclot
Molecules 2023, 28(14), 5510; https://doi.org/10.3390/molecules28145510 - 19 Jul 2023
Viewed by 3120
Abstract
Adamantane, the smallest diamondoid molecule with a symmetrical cage, contains two distinct carbon sites, CH and CH2. The ionization/excitation of the molecule leads to the cage opening and strong structural reorganization. While theoretical predictions suggest that the carbon site CH primarily [...] Read more.
Adamantane, the smallest diamondoid molecule with a symmetrical cage, contains two distinct carbon sites, CH and CH2. The ionization/excitation of the molecule leads to the cage opening and strong structural reorganization. While theoretical predictions suggest that the carbon site CH primarily causes the cage opening, the role of the other CH2 site remains unclear. In this study, we used advanced experimental Auger electron–ion coincidence techniques and theoretical calculations to investigate the fragmentation dynamics of adamantane after resonant inner-shell photoexcitation. Our results demonstrate that some fragmentation channels exhibit site-sensitivity of the initial core–hole location, indicating that different carbon site excitations could lead to unique cage opening mechanisms. Full article
(This article belongs to the Section Physical Chemistry)
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12 pages, 45938 KB  
Article
High-Throughput UV Photoionization and Fragmentation of Neutral Biomolecules as a Structural Fingerprint
by Siwen Wang, Yerbolat Dauletyarov and Daniel A. Horke
Molecules 2023, 28(13), 5058; https://doi.org/10.3390/molecules28135058 - 28 Jun 2023
Cited by 2 | Viewed by 2367
Abstract
We present UV photofragmentation studies of the structural isomers paracetamol, 3-Pyridinepropionic acid (3-PPIA) and (R)-(-)-2-Phenylglycine. In particular, we utilized a new laser-based thermal desorption source in combination with femtosecond multiphoton ionization at 343 nm and 257 nm. The continuous nature of our molecule [...] Read more.
We present UV photofragmentation studies of the structural isomers paracetamol, 3-Pyridinepropionic acid (3-PPIA) and (R)-(-)-2-Phenylglycine. In particular, we utilized a new laser-based thermal desorption source in combination with femtosecond multiphoton ionization at 343 nm and 257 nm. The continuous nature of our molecule source, combined with the 50 kHz repetition rate of the laser, allowed us to perform these experiments at high throughput. In particular, we present detailed laser intensity dependence studies at both wavelengths, producing 2D mass spectra with highly differential information about the underlying fragmentation processes. We show that UV photofragmentation produces highly isomer-specific mass spectra, and assign all major fragmentation pathways observed. The intensity-dependence measurements, furthermore, allowed us to evaluate the appearance intensities for each fragmentation channel, which helped to distinguish competing from consecutive fragmentation pathways. Full article
(This article belongs to the Special Issue Exclusive Feature Papers in Physical Chemistry)
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16 pages, 3396 KB  
Article
Photodegradation of Riboflavin under Alkaline Conditions: What Can Gas-Phase Photolysis Tell Us about What Happens in Solution?
by Natalie G. K. Wong, Chris Rhodes and Caroline E. H. Dessent
Molecules 2021, 26(19), 6009; https://doi.org/10.3390/molecules26196009 - 3 Oct 2021
Cited by 14 | Viewed by 8193
Abstract
The application of electrospray ionisation mass spectrometry (ESI-MS) as a direct method for detecting reactive intermediates is a technique of developing importance in the routine monitoring of solution-phase reaction pathways. Here, we utilise a novel on-line photolysis ESI-MS approach to detect the photoproducts [...] Read more.
The application of electrospray ionisation mass spectrometry (ESI-MS) as a direct method for detecting reactive intermediates is a technique of developing importance in the routine monitoring of solution-phase reaction pathways. Here, we utilise a novel on-line photolysis ESI-MS approach to detect the photoproducts of riboflavin in aqueous solution under mildly alkaline conditions. Riboflavin is a constituent of many food products, so its breakdown processes are of wide interest. Our on-line photolysis setup allows for solution-phase photolysis to occur within a syringe using UVA LEDs, immediately prior to being introduced into the mass spectrometer via ESI. Gas-phase photofragmentation studies via laser-interfaced mass spectrometry of deprotonated riboflavin, [RF − H], the dominant solution-phase species under the conditions of our study, are presented alongside the solution-phase photolysis. The results obtained illustrate the extent to which gas-phase photolysis methods can inform our understanding of the corresponding solution-phase photochemistry. We determine that the solution-phase photofragmentation observed for [RF − H] closely mirrors the gas-phase photochemistry, with the dominant m/z 241 condensed-phase photoproduct also being observed in gas-phase photodissociation. Further gas-phase photoproducts are observed at m/z 255, 212, and 145. The value of exploring both the gas- and solution-phase photochemistry to characterise photochemical reactions is discussed. Full article
(This article belongs to the Special Issue Women in Physical Chemistry)
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13 pages, 2576 KB  
Article
Photoproducts of the Photodynamic Therapy Agent Verteporfin Identified via Laser Interfaced Mass Spectrometry
by Chris Furlan, Jacob A. Berenbeim and Caroline E. H. Dessent
Molecules 2020, 25(22), 5280; https://doi.org/10.3390/molecules25225280 - 12 Nov 2020
Cited by 7 | Viewed by 4111
Abstract
Verteporfin, a free base benzoporphyrin derivative monoacid ring A, is a photosensitizing drug for photodynamic therapy (PDT) used in the treatment of the wet form of macular degeneration and activated by red light of 689 nm. Here, we present the first direct study [...] Read more.
Verteporfin, a free base benzoporphyrin derivative monoacid ring A, is a photosensitizing drug for photodynamic therapy (PDT) used in the treatment of the wet form of macular degeneration and activated by red light of 689 nm. Here, we present the first direct study of its photofragmentation channels in the gas phase, conducted using a laser interfaced mass spectrometer across a broad photoexcitation range from 250 to 790 nm. The photofragmentation channels are compared with the collision-induced dissociation (CID) products revealing similar dissociation pathways characterized by the loss of the carboxyl and ester groups. Complementary solution-phase photolysis experiments indicate that photobleaching occurs in verteporfin in acetonitrile; a notable conclusion, as photoinduced activity in Verteporfin was not thought to occur in homogenous solvent conditions. These results provide unique new information on the thermal break-down products and photoproducts of this light-triggered drug. Full article
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50 pages, 10786 KB  
Article
Structural Aspects of the Ortho Chloro- and Fluoro- Substituted Benzoic Acids: Implications on Chemical Properties
by Gulce Ogruc Ildiz and Rui Fausto
Molecules 2020, 25(21), 4908; https://doi.org/10.3390/molecules25214908 - 23 Oct 2020
Cited by 16 | Viewed by 6301
Abstract
This article presents a detailed comprehensive investigation of the ortho fluoro- and chloro- substituted benzoic acids both, as isolated molecules and in the crystalline phase. Quantum chemical calculations performed within the density functional theory (DFT) formalism are used to investigate the potential energy [...] Read more.
This article presents a detailed comprehensive investigation of the ortho fluoro- and chloro- substituted benzoic acids both, as isolated molecules and in the crystalline phase. Quantum chemical calculations performed within the density functional theory (DFT) formalism are used to investigate the potential energy landscapes of the molecules, taking into special consideration the effects of the interactions between the carboxylic group and the ortho halogen substituents, as well as the nature of these later on the structure and properties of the investigated systems. The structures of the relevant conformers of the molecules are discussed in comparative terms, and used to rationalize experimental data obtained for the compounds in the gas phase and isolated in low-temperature inert matrices. The UV-induced photofragmentation reactions of two of the compounds isolated in cryogenic inert matrices were studied as illustrative cases. The structures of the crystals reported previously in the literature are revisited and discussed also in a comparative basis. Particular emphasis is given to the analysis of the intermolecular interactions in the different crystals, using Hirshfeld surface analysis, the CE-B3LYP energy decomposition model and the HOMA index, and to their correlation with thermodynamic data. Full article
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14 pages, 1585 KB  
Article
Sequential Collinear Photofragmentation and Atomic Absorption Spectroscopy for Online Laser Monitoring of Triatomic Metal Species
by Jan Viljanen, Kim Kalmankoski, Victor Contreras, Jaakko K. Sarin, Tapio Sorvajärvi, Hanna Kinnunen, Sonja Enestam and Juha Toivonen
Sensors 2020, 20(2), 533; https://doi.org/10.3390/s20020533 - 18 Jan 2020
Cited by 5 | Viewed by 3761
Abstract
Industrial chemical processes are struggling with adverse effects, such as corrosion and deposition, caused by gaseous alkali and heavy metal species. Mitigation of these problems requires novel monitoring concepts that provide information on gas-phase chemistry. However, selective optical online monitoring of the most [...] Read more.
Industrial chemical processes are struggling with adverse effects, such as corrosion and deposition, caused by gaseous alkali and heavy metal species. Mitigation of these problems requires novel monitoring concepts that provide information on gas-phase chemistry. However, selective optical online monitoring of the most problematic diatomic and triatomic species is challenging due to overlapping spectral features. In this work, a selective, all-optical, in situ gas-phase monitoring technique for triatomic molecules containing metallic atoms was developed and demonstrated with detection of PbCl2. Sequential collinear photofragmentation and atomic absorption spectroscopy (CPFAAS) enables determination of the triatomic PbCl2 concentration through detection of released Pb atoms after two consecutive photofragmentation processes. Absorption cross-sections of PbCl2, PbCl, and Pb were determined experimentally in a laboratory-scale reactor to enable calibration-free quantitative determination of the precursor molecule concentration in an arbitrary environment. Limit of detection for PbCl2 in the laboratory reactor was determined to be 0.25 ppm. Furthermore, the method was introduced for in situ monitoring of PbCl2 concentration in a 120 MWth power plant using demolition wood as its main fuel. In addition to industrial applications, the method can provide information on chemical reaction kinetics of the intermediate species that can be utilized in reaction simulations. Full article
(This article belongs to the Section Chemical Sensors)
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13 pages, 2444 KB  
Article
Relative Stability of Small Silver, Platinum, and Palladium Doped Gold Cluster Cations
by Piero Ferrari and Ewald Janssens
Appl. Sci. 2019, 9(8), 1666; https://doi.org/10.3390/app9081666 - 23 Apr 2019
Cited by 8 | Viewed by 4600
Abstract
The stability patterns of single silver, platinum, and palladium atom doped gold cluster cations, MAuN−1+ (M = Ag, Pt, Pd; N = 3–6), are investigated by a combination of photofragmentation experiments and density functional theory calculations. The mass [...] Read more.
The stability patterns of single silver, platinum, and palladium atom doped gold cluster cations, MAuN−1+ (M = Ag, Pt, Pd; N = 3–6), are investigated by a combination of photofragmentation experiments and density functional theory calculations. The mass spectra of the photofragmented clusters reveal an odd-even pattern in the abundances of AgAuN−1+, with local maxima for clusters containing an even number of valence electrons, similarly to pure AuN+. The odd-even pattern, however, disappears upon Pt and Pd doping. Computed dissociation energies agree well with the experimental findings for the different doped clusters. The effect of Ag, Pt, and Pd doping is discussed on the basis of an analysis of the density of states of the N = 3–5 clusters. Whereas Ag delocalizes its 5s valence electron in all sizes, this process is size-specific for Pt and Pd. Full article
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19 pages, 3642 KB  
Article
The Potential of EuPRAXIA@SPARC_LAB for Radiation Based Techniques
by Antonella Balerna, Samanta Bartocci, Giovanni Batignani, Alessandro Cianchi, Enrica Chiadroni, Marcello Coreno, Antonio Cricenti, Sultan Dabagov, Andrea Di Cicco, Massimo Faiferri, Carino Ferrante, Massimo Ferrario, Giuseppe Fumero, Luca Giannessi, Roberto Gunnella, Juan José Leani, Stefano Lupi, Salvatore Macis, Rosa Manca, Augusto Marcelli, Claudio Masciovecchio, Marco Minicucci, Silvia Morante, Enrico Perfetto, Massimo Petrarca, Fabrizio Pusceddu, Javad Rezvani, José Ignacio Robledo, Giancarlo Rossi, Héctor Jorge Sánchez, Tullio Scopigno, Gianluca Stefanucci, Francesco Stellato, Angela Trapananti and Fabio Villaadd Show full author list remove Hide full author list
Condens. Matter 2019, 4(1), 30; https://doi.org/10.3390/condmat4010030 - 7 Mar 2019
Cited by 15 | Viewed by 5589
Abstract
A proposal for building a Free Electron Laser, EuPRAXIA@SPARC_LAB, at the Laboratori Nazionali di Frascati, is at present under consideration. This FEL facility will provide a unique combination of a high brightness GeV-range electron beam generated in a X-band RF linac, a 0.5 [...] Read more.
A proposal for building a Free Electron Laser, EuPRAXIA@SPARC_LAB, at the Laboratori Nazionali di Frascati, is at present under consideration. This FEL facility will provide a unique combination of a high brightness GeV-range electron beam generated in a X-band RF linac, a 0.5 PW-class laser system and the first FEL source driven by a plasma accelerator. The FEL will produce ultra-bright pulses, with up to 10 12 photons/pulse, femtosecond timescale and wavelength down to 3 nm, which lies in the so called “water window”. The experimental activity will be focused on the realization of a plasma driven short wavelength FEL able to provide high-quality photons for a user beamline. In this paper, we describe the main classes of experiments that will be performed at the facility, including coherent diffraction imaging, soft X-ray absorption spectroscopy, Raman spectroscopy, Resonant Inelastic X-ray Scattering and photofragmentation measurements. These techniques will allow studying a variety of samples, both biological and inorganic, providing information about their structure and dynamical behavior. In this context, the possibility of inducing changes in samples via pump pulses leading to the stimulation of chemical reactions or the generation of coherent excitations would tremendously benefit from pulses in the soft X-ray region. High power synchronized optical lasers and a TeraHertz radiation source will indeed be made available for THz and pump–probe experiments and a split-and-delay station will allow performing XUV-XUV pump–probe experiments. Full article
(This article belongs to the Special Issue High Precision X-Ray Measurements)
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17 pages, 2884 KB  
Article
Protomer-Dependent Electronic Spectroscopy and Photochemistry of the Model Flavin Chromophore Alloxazine
by Edward Matthews, Rosaria Cercola and Caroline E. H. Dessent
Molecules 2018, 23(8), 2036; https://doi.org/10.3390/molecules23082036 - 14 Aug 2018
Cited by 26 | Viewed by 5176
Abstract
Flavin chromophores play key roles in a wide range of photoactive proteins, but key questions exist in relation to their fundamental spectroscopic and photochemical properties. In this work, we report the first gas-phase spectroscopy study of protonated alloxazine (AL∙H+), a model [...] Read more.
Flavin chromophores play key roles in a wide range of photoactive proteins, but key questions exist in relation to their fundamental spectroscopic and photochemical properties. In this work, we report the first gas-phase spectroscopy study of protonated alloxazine (AL∙H+), a model flavin chromophore. Laser photodissociation is employed across a wide range (2.34–5.64 eV) to obtain the electronic spectrum and characterize the photofragmentation pathways. By comparison to TDDFT quantum chemical calculations, the spectrum is assigned to two AL∙H+ protomers; an N5 (dominant) and O4 (minor) form. The protomers have distinctly different spectral profiles in the region above 4.8 eV due to the presence of a strong electronic transition for the O4 protomer corresponding to an electron-density shift from the benzene to uracil moiety. AL∙H+ photoexcitation leads to fragmentation via loss of HCN and HNCO (along with small molecules such as CO2 and H2O), but the photofragmentation patterns differ dramatically from those observed upon collision excitation of the ground electronic state. This reveals that fragmentation is occurring during the excited state lifetime. Finally, our results show that the N5 protomer is associated primarily with HNCO loss while the O4 protomer is associated with HCN loss, indicating that the ring-opening dynamics are dependent on the location of protonation in the ground-state molecule. Full article
(This article belongs to the Section Physical Chemistry)
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11 pages, 1136 KB  
Article
Observing Femtosecond Fragmentation Using Ultrafast X-ray-Induced Auger Spectra
by Thomas J. A. Wolf, Fabian Holzmeier, Isabella Wagner, Nora Berrah, Christoph Bostedt, John Bozek, Phil Bucksbaum, Ryan Coffee, James Cryan, Joe Farrell, Raimund Feifel, Todd J. Martinez, Brian McFarland, Melanie Mucke, Saikat Nandi, Francesco Tarantelli, Ingo Fischer and Markus Gühr
Appl. Sci. 2017, 7(7), 681; https://doi.org/10.3390/app7070681 - 1 Jul 2017
Cited by 22 | Viewed by 9788
Abstract
Molecules often fragment after photoionization in the gas phase. Usually, this process can only be investigated spectroscopically as long as there exists electron correlation between the photofragments. Important parameters, like their kinetic energy after separation, cannot be investigated. We are reporting on a [...] Read more.
Molecules often fragment after photoionization in the gas phase. Usually, this process can only be investigated spectroscopically as long as there exists electron correlation between the photofragments. Important parameters, like their kinetic energy after separation, cannot be investigated. We are reporting on a femtosecond time-resolved Auger electron spectroscopy study concerning the photofragmentation dynamics of thymine. We observe the appearance of clearly distinguishable signatures from thymine′s neutral photofragment isocyanic acid. Furthermore, we observe a time-dependent shift of its spectrum, which we can attribute to the influence of the charged fragment on the Auger electron. This allows us to map our time-dependent dataset onto the fragmentation coordinate. The time dependence of the shift supports efficient transformation of the excess energy gained from photoionization into kinetic energy of the fragments. Our method is broadly applicable to the investigation of photofragmentation processes. Full article
(This article belongs to the Special Issue X-Ray Free-Electron Laser)
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7 pages, 2991 KB  
Article
Inner-Shell Ionization and Fragmentation of Isolated Endohedral Fullerene Ions by XUV Radiation
by Stefan Schippers
Condens. Matter 2016, 1(1), 6; https://doi.org/10.3390/condmat1010006 - 21 Nov 2016
Cited by 2 | Viewed by 3883
Abstract
The photon–ion merged-beams technique for photoabsorption studies of ionized nanoparticles with synchrotron radiation is introduced. As an example, recent results from photoionization and photofragmentation of the endohedral fullerene ions Lu3 N @ C 80 + , Lu3 [...] Read more.
The photon–ion merged-beams technique for photoabsorption studies of ionized nanoparticles with synchrotron radiation is introduced. As an example, recent results from photoionization and photofragmentation of the endohedral fullerene ions Lu3 N @ C 80 + , Lu3 N @ C 80 2 + , and Lu3 N @ C 80 3 + are briefly discussed, highlighting the sensitivity and versatility of the experimental technique. Full article
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23 pages, 1646 KB  
Article
Dendrimer-Capped Nanoparticles Prepared by Picosecond Laser Ablation in Liquid Environment
by Emilia Giorgetti, Anna Giusti, Francesco Giammanco, Paolo Marsili and Simona Laza
Molecules 2009, 14(9), 3731-3753; https://doi.org/10.3390/molecules14093731 - 22 Sep 2009
Cited by 23 | Viewed by 9910
Abstract
Fifth generation ethylendiamine-core poly(amidoamine) (PAMAM G5) is presented as an efficient capping agent for the preparation of metal and semiconductor nanoparticles by ps laser ablation in water. In particular, we describe results obtained with the fundamental, second and third harmonic of a ps [...] Read more.
Fifth generation ethylendiamine-core poly(amidoamine) (PAMAM G5) is presented as an efficient capping agent for the preparation of metal and semiconductor nanoparticles by ps laser ablation in water. In particular, we describe results obtained with the fundamental, second and third harmonic of a ps Nd:YAG laser and the influence of laser wavelength and pulse energy on gold particle production and subsequent photofragmentation. In this framework, the role of the dendrimer and, in particular, its interactions with gold clusters and cations are accounted. Full article
(This article belongs to the Special Issue Dendrimers - from Synthesis to Applications)
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