Search Results (420)

This study focused on the carbonate system dynamics and air–sea CO₂ fluxes in the open-ocean waters of the Madeira–Tore Seamount Complex during August 2024. Surface water properties revealed pronounced latitudinal gradients in sea surface temperature (21.9–23.1 °C), salinity (36.2–36.7), and dissolved oxygen (228–251 µmol Kg⁻¹), influenced by mesoscale eddies and topographically driven upwelling. Despite oligotrophic conditions, distinct phytoplankton assemblages were observed, with coccolithophores dominating southern seamounts and open-ocean stations, and green algae and diatoms indicating episodic nutrient input. Surface total alkalinity (TA: 2236–2467 µmol Kg⁻¹), dissolved inorganic carbon (DIC: 2006–2183 µmol Kg⁻¹), and pCO₂ (467–515 µatm) showed spatial variability aligned with water mass characteristics and biological activity. All stations exhibited positive air–sea CO₂ fluxes (2.8–11.5 mmol m⁻² d⁻¹), indicating the region is a CO₂ source during summer. Calcite and aragonite saturation states were highest in stratified, warmer waters. Principal Component Analysis highlighted the role of physical mixing, carbonate chemistry, and biological uptake in structuring regional variability. Our findings emphasize and contribute to the complex interplay of physical and biogeochemical drivers in modulating carbon cycling and ecosystem structure across Atlantic seamounts. Full article

Limited research has been conducted on the potential and mechanisms of irrigating Suaeda salsa with wastewater and microalgae to improve saline–alkali land. This study used three irrigation treatments (freshwater, saline wastewater, and saline wastewater with microalgae) to irrigate S. salsa, and microalgae promoted the growth of S. salsa and increased soil nutrient content, increasing available nitrogen (4.85%), available phosphorus (44.51%), and organic carbon (24.05%) while alleviating salt stress through reduced soil salinity (13.52%) and electrical conductivity (21.62%). These changes promoted eutrophic bacteria while inhibiting oligotrophic bacteria. Bacterial community composition exhibited significant variations, primarily driven by soil pH, total nitrogen, and organic carbon content. Notably, rhizosphere bacteria showed enhanced functional capabilities, with increased abundance of salt stress resistance and nitrogen metabolism-related genes compared to original soil, particularly under saline irrigation conditions. Furthermore, microalgae addition enriched nitrogen metabolism-related gene abundance. These findings revealed the potential role of key bacteria in enhancing plant growth and the soil environment and highlighted the potential of applying S. salsa, wastewater, and microalgae for the synergistic improvement of saline–alkali land. Full article

This study presents the living coccolithophore communities and the morphological variability of Emiliania huxleyi in the South Aegean Sea from three sampling regions during winter-early spring (March 2017, March 2019) and summer (August 2019). Emphasis is given to March 2017 to monitor the variations in coccolithophore assemblages after an exceptionally cold event in December 2016, which resulted in newly produced dense waters that ventilated the Aegean deep basins. The assemblages displayed distinct seasonality with the predominance of E. huxleyi and Syracosphaera molischii during winter-early spring, associated with the water column mixing. By contrast, summer assemblages were featured by holococcolithophores and typical taxa of warm, oligotrophic upper waters. It seems that the phytoplanktonic succession as well as the nutrient supply to the upper euphotic layers were affected by the water column perturbation during the extreme winter of 2016–2017, which led to strong convective mixing and dense water formation. The decreased coccosphere densities during March 2017, accompanied by the notable presence of diatoms, were most probably associated with a prolonged diatom bloom, causing delay in the development of the coccolithophore community and resulting in a nitrogen-limited setting. Emiliania huxleyi morphometry showed the characteristic seasonal calcification trend of the Aegean, with the dominance of smaller coccoliths in the summer and increased coccolith length and width during the cold season. The intense cold conditions and wind-induced mixing during the winter of 2016–2017 possibly increased the absorption of atmospheric CO₂ in surface waters, causing increased acidity and the subsequent presence of etched/undercalcified E. huxleyi coccoliths and other taxa, most probably implying in situ calcite dissolution. Full article

Microcystis, a potentially toxigenic cyanobacterium known to form extensive blooms in eutrophic lakes globally, was investigated in the cold oligotrophic Lake Baikal. We report the isolation of two Microcystis strains, Microcystis aeruginosa and M. novacekii, and document the presence of the latter species in Lake Baikal for the first time. In M. aeruginosa strain BN23, we detected the microcystin synthetase gene mcyE. Liquid chromatography-mass spectrometry revealed the presence of two microcystin variants in BN23, with microcystin-LR, a highly potent toxin, being the dominant form. The concentration of MC-LR reached 540 µg/g dry weight. In contrast, M. novacekii strain BT23 lacked both microcystin synthesis genes and detectable toxins. The habitat waters were characterized as oligotrophic with minor elements of mesotrophy, exhibiting low phytoplankton biomass dominated by the chrysophyte Dinobryon cylindricum (76–77% of biomass), with cyanobacteria contributing 8–10%. The contribution of Microcystis spp. to the total phytoplankton biomass could not be quantified as they were exclusively found in net samples. The water temperature at both sampling stations was ~19 °C, which is considerably lower than optimal for Microcystis spp. and potentially conducive to enhanced microcystin production in toxigenic genotypes. Full article

[Background] Brasenia schreberi is a perennial floating leaf aquatic plant with high ecological protection value and potential for economic development, and thus, its endangered mechanisms are of great concern. The rapid endangerment of this species in modern times may be primarily attributed to the deterioration of water and soil environmental conditions, as its growth relies on high-quality water and soil. [Objective] Exploring the responses of B. schreberi to water and soil conditions from the perspective of functional traits is of great significance for understanding its endangered mechanisms and implementing effective conservation strategies. [Methods] This study was conducted in the Tengchong Beihai Wetland, which has the largest natural habitat of B. schreberi in China. By measuring the key functional traits of B. schreberi and detecting the water and soil parameters at the collecting sites, the responses of these functional traits to the water and soil conditions have been investigated. [Results] (1) The growth status of B. schreberi affects the expression of its functional traits. Compared with sporadic distribution, B. schreberi in continuous patches have significantly higher stomatal conductance, intercellular CO₂ concentration, transpiration rate, and vein density, while these plants have significantly smaller leaf area and perimeter. (2) Good water quality directly promotes photosynthetic, morphological, and structural traits. However, high soil carbon, nitrogen, and phosphorus contents can inhibit the photosynthetic rate. The net photosynthetic rate is significantly positively correlated with dissolved oxygen content, pH value, ammonia nitrogen, and nitrate nitrogen contents in the water, as well as the magnesium, zinc, and silicon contents in the soil. In contrast, the net photosynthetic rate is significantly negatively correlated with the total phosphorus content in water and the total carbon, total nitrogen, and total phosphorus content in the soil. (3) Leaf area and perimeter show positive correlations with various water parameters, including the depth, temperature, pH value, dissolved oxygen content, ammonium nitrogen, and nitrate nitrogen content, yet they are negatively correlated with total phosphorus content, chemical oxygen demand, biological oxygen demand, and permanganate index of water. [Conclusions] This study supports the idea that B. schreberi thrives in oligotrophic water environments, while the notion that fertile soil is required for its growth still needs to be investigated more thoroughly. Full article

Lake eutrophication, often driving harmful algal blooms (HABs) and ecosystem degradation, involves complex biogeochemical shifts within sediments. Changes in the sedimentary dissolved organic matter (DOM) composition during transitions from macrophyte to algal dominance are thought to critically regulate internal phosphorus (P) loading, yet the underlying mechanisms, especially in vulnerable plateau lakes like Qilu Lake, require further elucidation. This study investigated the coupled cycling of carbon (C) and P in response to historical ecosystem succession and anthropogenic activities using a 0–24 cm sediment core from Qilu Lake. We analyzed the total organic carbon (TOC), total phosphorus (TP), sequential P fractions, and DOM fluorescence characteristics (EEM-PARAFAC), integrated with chronological series data. The results revealed an asynchronous vertical distribution of TOC and TP, reflecting the shift from a submerged macrophyte-dominated, oligotrophic state (pre-1980s; high TOC, low TP, stable Ca-P dominance) to an algae-dominated, eutrophic state. The eutrophication period (~1980s–2010s) showed high TP accumulation (Ca-P and NaOH85 °C-P enrichment), despite a relatively low TOC (due to rapid mineralization), while recent surface sediments (post-2010s) exhibited a high TOC, but a lower TP following input controls. Concurrently, the DOM composition shifted from microbial humic-like dominance (C1) in deeper sediments to protein-like dominance (C3) near the surface. This study demonstrates that the ecosystem shift significantly regulates P speciation and mobility by altering sedimentary DOM abundance and chemical characteristics (e.g., protein-like DOM correlating negatively with Ca-P), reinforcing a positive feedback mechanism that sustains internal P loading and potentially exacerbates HABs. DOM molecular characteristics emerged as a key factor controlling the internal P cycle in Qilu Lake, providing critical insights for managing eutrophication in plateau lakes. Full article

Domestic showers are critical points of human exposure to microbial biofilms, which may harbor opportunistic pathogens such as Legionella spp. and nontuberculous Mycobacterium. However, biofilm development in reverse osmosis (RO)-treated drinking water systems remains poorly understood. We tested whether shower plumbing material (flexible polymer hose versus showerhead with inline polyethersulfone filter) and seasonal water variations influence biofilm community assembly. In a controlled field study, commercial shower systems were deployed in households supplied with RO-treated tap water from the KAUST Seawater Desalination Plant; biofilm samples were collected from hoses and filters over 3–17 months. Flow cytometry and 16S rRNA gene amplicon sequencing characterized microbial abundance, diversity, and taxonomic composition. We found that alpha diversity, measured by observed OTUs, was uniformly low, reflecting ultra-low biomass in RO-treated tap water. Beta diversity analyses revealed clear clustering by material type, with hoses exhibiting greater richness and evenness than filters. Core taxa—Pelomonas, Blastomonas, and Porphyrobacter—dominated both biofilm types, suggesting adaptation to low-nutrient, chlorinated conditions. Overall, our results demonstrate that ultra-low-nutrient RO tap water still supports the formation of material-driven, low-diversity biofilms dominated by oligotrophic taxa, underscoring plumbing-material choice as a critical factor for safeguarding shower water quality. These findings advance our understanding of biofilm ecology in RO-treated systems, informing strategies to mitigate potential health risks in shower water. Full article

Albic soil, which is generally oligotrophic, is a typical low-yield soil widely distributed in China. It is still unclear how to effectively improve soil fertility and strengthen the sustainable development of agricultural cultivation. For this purpose, 8-year field experiments were performed to determine the effects of continuous rice straw return on soil nutrient characteristics, yield, and the soil microbial community. Straw incorporation into albic soil significantly contributed to nutrient accumulation, containing alkali-hydrolysed nitrogen, available phosphorus, available potassium, and total organic carbon, thereby increasing rice yield. The number of spikelets per panicle increased from 93.96 to 97.58, and the grain filling value increased from 88.11 to 91.44%. Additionally, rice yield increased over the 8 consecutive years of straw return, and the rice yield of straw return treatments ranged from 10,048.27 to 10,605.18 kg/ha. High-throughput sequencing and classification revealed that the composition of bacterial and fungal communities was similar among treatments, but there were significant differences in species abundance, which was associated with lignocellulose degradation. Overall, the continuous return of straw, a native organic material, is a promising approach for soil amendment, with resource-saving and environmentally friendly characteristics. Full article

Bacteriophages (phages) are one of the critical biotic drivers of prokaryotic community dynamics, functions, and evolution. Despite their importance in aquatic ecosystems, very few phages have been isolated from freshwater lakes, hampering our understanding of their ecological importance and usage in a variety of biotechnological applications. Limnohabitans, with a ubiquitous distribution, is a metabolically versatile, fast-growing, morphologically diverse freshwater lake bacterial genera. It is especially abundant in pH-neutral and alkaline aquatic habitats, where it represents an average of 12% of freshwater bacterioplankton and plays an important role in funneling carbon from primary producers to higher trophic levels. However, no phages infecting Limnohabitans have been reported to date. Here, we describe, for the first time, three phages infecting Limnohabitans, DC31, DC33, and YIMV22061, isolated from two freshwater lakes in China and characterized using genome content analysis and comparative genomics. DC31 and DC33, recovered from the eutrophic Dianchi Lake, with auxiliary metabolic genes (AMGs), associated with nucleotide metabolism, whereas YIMV22061, isolated from the oligotrophic Fuxian Lake, carried AMGs involved in antibiotic resistance. The AMGs they carried highlight their impacts on Limnohabitans in different environments. Comparative genomic analyses indicate that DC31, DC33, and YIMV22061 represent three novel species in the Caudoviricetes class. IMG/VR database alignment further reveal that these phages are widely distributed across diverse aquatic and terrestrial ecosystems globally, suggesting their ecological significance. This study provides a basis for better understanding Limnohabitans–phage interactions. Full article

The unarmored dinoflagellate Akashiwo sanguinea is a cosmopolitan harmful algal species known for forming intense blooms leading to mass mortality of fish, shellfish, and seabirds. Globally distributed populations of A. sanguinea have been classified into four ribotypes based on their characteristic sequences in LSU rRNA gene and primary geographic distributions. In this study, we compared the bacterial communities co-existing with the six strains of A. sanguinea from China and the USA (belonging to two ribotypes) using high-throughput sequencing of 16S rRNA gene amplicons. Generally, a bacterial microbiome with high diversity was found to be associated with laboratory-cultured A. sanguinea strains from different geographic origins. Based on ribotype classification, the six samples were divided into two groups (ribotype A: AsCHINA; ribotype C: AsUSA) for subsequent comparative analyses of their bacterial communities. Beta diversity analysis revealed a clear separation between the two groups, reflecting significant differences in bacterial community composition between the two ribotypes. Significantly higher abundance of nitrogen-fixing bacteria was found in the AsUSA group, suggesting that ribotype C may benefit from external nitrogen sources provided by their bacterial associates. If this also holds true in natural environments, this nitrogen-fixing partnership likely confers a competitive advantage to ribotype C in oligotrophic offshore waters, and potentially extends bloom duration when environmental nitrogen is depleted. Our study raised the possibility that different ribotypes of A. sanguinea may harbor distinct prokaryotic microbiomes in their phycospheres under stable cultivation conditions. Further comprehensive comparison among more isolates across all four ribotypes is highly necessary to validate this hypothesis. Full article

An oceanographic cruise with 34 stations was conducted in the central-southwestern region of the Gulf of Mexico from February 19 to 10 March 2013. This study included the measurement of hydrographic and phytoplankton bio-optical parameters, and pigment samples were collected at two depth levels (10 and 50 m). Our results showed a warm and nutrient-depleted water column associated with low chlorophyll a (<1 mg Chla m⁻³) and average values of a_ph440 (0.01 ± 0.008, m⁻¹) and a_d350 (0.04 ± 0.02, m⁻¹). In addition, nano-microphytoplankton abundance and pigments were analyzed using a light microscope and HPLC, respectively. Overall, the Gulf of Mexico exhibited oligotrophic characteristics, with Chla (0.17 ± 0.11 mg m⁻³) and NO₃⁻ (0.03 ± 0.001 µM), except at 50 m depth in some stations north of Yucatán and in Campeche Bay and at surface level off the Tamaulipas shelf. In these three regions, values of a_ph(440), a_d(350), (Chla) and phytoplankton abundance (>12 × 10³ cells L⁻¹) were observed near river mouths and under seasonal oceanographic forcings, which increased the growth and diversity of phytoplankton. The most relevant pigments found were DVchla (0.06 ± 0.13 mg m⁻³), Chlb (0.16 ± 0.21 mg m⁻³), Zea (0.06 ± 0.03 mg m⁻³), and Hex-fuco (0.02 ± 0.02 mg m⁻³); these are associated with the presence of Prochlorococcus, chlorophytes, Synechococcus, prymnesiophytes, and diatoms. Through the bio-optical variability, we determined the ecological geography of phytoplankton in four different spectral shapes, where M1 and M2 represent the group of cyanobacteria (Prochlorococcus and Synechococcus) and M3 and M4 represent a mixture of diatoms, dinoflagellates, and chlorophytes. In conclusion, we consider that oceanographic processes such as cyclonic and anticyclonic structures and permanent rivers determine the favorable changes in phytoplankton (>nutrients, Chla, a_ph440) and an increment in the number of phytoplankton spectral shapes). Full article

Harmful Raphidiopsis raciborskii blooms threaten aquatic ecosystems via toxin production, hypoxia induction, and biodiversity loss. To elucidate the synergistic regulatory mechanisms of Fe³⁺ and phosphorus (P) in cyanobacterial growth, we used a sterile pure culture system under laboratory conditions. We set different phosphorus sources (organic phosphorus and inorganic phosphorus) and low phosphorus concentration of R. raciborskii culture medium for culture, and set different Fe³⁺ addition amount to determine the basic growth index of cyanobacteria cells and the phosphorus content of different components. The results revealed that under conditions of sufficient inorganic phosphorus, there was a logarithmic relationship between ferric ammonium citrate (Fe³⁺) and the specific growth rate of R. raciborskii. Fe³⁺ > 2 mg/L enhanced IPS enrichment and biomass accumulation. However, in oligotrophic or mesotrophic environments with low inorganic phosphorus concentrations, the effect of Fe³⁺ on the growth of R. raciborskii contrasted with that observed in high-IP (eutrophic) environments, exhibiting a pattern of ‘low promotion and high inhibition’. Under organic phosphorus conditions, R. raciborskii converted phosphorus by increasing alkaline phosphatase activity (APA), but this metabolic compensation failed to restore physiological functions, resulting in growth suppression and enhanced cellular phosphorus reserves. Our results establish quantitative linkages between Fe³⁺-P co-limitation thresholds and algal adaptive responses, providing mechanistic insights for controlling bloom dynamics through targeted manipulation of Fe-P bioavailability. Full article

Trichoderma harzianum, a prominent biocontrol microorganism, often exhibits restricted colonization efficiency in nutrient-poor soil, thus reducing its biocontrol effectiveness. This study investigated the impact of vitamin C industrial fermentation byproduct (residue after evaporation, RAE), which is recognized for enhancing plant growth and stress tolerance, on the colonization ability and anti-pathogenic fungi activity of T. harzianum through in vitro and pot experiments. In vitro experiments demonstrated that RAE and its main component (2-keto-L-gulonic acid, 2KGA) significantly enhanced biomass and spore production (41.44% and 158.46% on average) of two T. harzianum strains in an oligotrophic medium (1/5 PDA). In a more nutrient-limited medium (1/10 PDA), RAE significantly increased the inhibition rates of T. harzianum S against Fusarium graminearum, Botrytis cinerea, and Alternaria alternata by 6.12–7.77%. Pot experiments further revealed that, compared with T. harzianum application alone, the combined application of RAE and T. harzianum S, (1) significantly elevated T. harzianum S abundance by 23.77% while significantly reducing B. cinerea abundance by 33.78% in rhizosphere soil; (2) significantly improved the content of soil available phosphorus (147.63%), ammonium nitrogen (60.05%), and nitrate nitrogen (32.19%); and (3) significantly improved the superoxide dismutase activity (17.39%) and fresh weight of tomato plants (130.74%). Correlation analysis revealed that there were significant positive correlations between T. harzianum S abundances/plant biomass and RAE, and significantly negative correlations between B. cinerea abundance and T. harzianum S/plant biomass/peroxidase activity. Collectively, RAE effectively promoted the growth of T. harzianum and pathogen suppression ability, while improving soil fertility and tomato biomass. This study offers novel insights into RAE’s agricultural application for plant disease control while supporting the sustainable development of vitamin C production. Full article

Compared with traditional grain starch sources, duckweed (Spirodela polyrhiza, S. polyrhiza for simple) does not require soil to produce starch, and the process is less affected by the external environment. Moreover, it produces high levels of starch under certain conditions. This study investigated the patterns and mechanisms of starch accumulation in S. polyrhiza ZH0196 under nutrient stress by determining the changes in starch content, photosynthesis, and amylase activity at different stress induction times. Under nutrient stress, the culture solution was replaced with deionized water. The starch content increased from 1.95% to 41.71% (dry weight) after 2 days of nutrient stress induction. Short-term nutrient-stress treatment had little effect on frond photosynthesis, enhanced the activity of starch synthesis-related enzyme, and weakened the activity of degradation-related enzymes. The transcriptome results further indicated that the key genes and metabolic patterns of starch synthesis promoted starch accumulation in S. polyrhiza ZH0196 fronds by accelerating the response to CO₂ fixation via the Calvin cycle, promoting straight-chain starch synthesis, and decreasing starch degradation after short-term oligotrophic treatment. This study suggests that nutrient stress is a green and efficient method of increasing the starch yield of duckweed, which represents an important insight for developing duckweed starch resources. Full article

This study investigates phytoplankton and zooplankton assemblages and their relationships with environmental factors along trophic gradients in 50 lentic ecosystems across Thailand. Field sampling was conducted at 264 points in April and May 2024. Physical, chemical, and biological parameters were measured both in the field and the laboratory. Plankton samples were identified and quantified to assess species richness, abundance, and community composition. The results revealed that lentic water bodies could be classified into four trophic states: 1 oligotrophic, 6 mesotrophic, 17 eutrophic, and 26 hypereutrophic systems. This study found that phytoplankton density peaked in hypereutrophic waters, while species richness was highest in oligotrophic conditions. Nutrient-rich environments favored Cyanophyta dominance, whereas Dinophyta were more abundant in nutrient-poor systems. Zooplankton assemblages, particularly Rotifers and Copepoda, showed higher abundance in eutrophic and hypereutrophic ecosystems, while diversity was greater in mesotrophic and oligotrophic waters. Statistical analyses indicated that environmental factors, especially nutrient concentrations, played a significant role in shaping plankton assemblages along the trophic gradients. Cyanophyta showed strong positive correlations with total dissolved solid (TDS) (r = 0.383, p < 0.01) and electrical conductivity (EC) (r = 0.403, p < 0.01), while Dinophyta showed a strong positive correlation with dissolved oxygen (r = 0.319, p < 0.05). Zooplankton, particularly Rotifers, exhibited significant correlations with total phosphorus (TP) (r = 0.358, p < 0.05) and TDS (r = 0.387, p < 0.01). Multidimensional Scaling (MDS) analysis and Principal Coordinate Analysis (PCoA) confirmed that water quality variables strongly influenced community structure. This study provides important insights into how environmental factors drive phytoplankton and zooplankton assemblages across trophic gradients in Thai lentic ecosystems, contributing to the improved understanding and management of freshwater bodies and eutrophication. Full article