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21 pages, 8718 KB  
Review
Lotus Seeds: Current Molecular Biology Insights and Future Perspectives as a Prominent Biological Resource
by Jia Xin, Ruirui Li, Juan Liu, Xianbao Deng, Dong Yang, Heyun Song, Minghua Zhang, Hui Yang, Runjie He, Yapei Zhang, Heng Sun and Mei Yang
Plants 2026, 15(1), 136; https://doi.org/10.3390/plants15010136 - 2 Jan 2026
Viewed by 678
Abstract
Lotus (Nelumbo nucifera Gaertn.) is an economically and medicinally significant aquatic plant, with its seeds (lotus seeds) having attracted considerable attention due to their unique developmental traits and abundance of bioactive and nutritional components. Over recent decades, advancements in lotus genome annotation [...] Read more.
Lotus (Nelumbo nucifera Gaertn.) is an economically and medicinally significant aquatic plant, with its seeds (lotus seeds) having attracted considerable attention due to their unique developmental traits and abundance of bioactive and nutritional components. Over recent decades, advancements in lotus genome annotation and assembly have facilitated comprehensive investigations into the molecular biology of lotus seeds. Key genes involved in the biosynthesis of nutrients and bioactive compounds within lotus seeds have now been identified and functionally validated. This review comprehensively summarizes the latest advancements in the molecular biology of the edible and medicinal properties of lotus seeds, focusing on the biosynthetic mechanisms of key nutrients, such as starch, flavonoids, and alkaloids, as well as the molecular mechanisms underlying lotus seed developmental processes. Additionally, we present a detailed overview of the mechanisms involved in the postharvest preservation of fresh lotus seeds and their exceptional longevity. Based on the current progress in lotus seed molecular biology, we propose future research directions and methodologies. This review not only deepens the understanding of the molecular biology of lotus seeds but also provides valuable theoretical insights and practical guidance for promoting the genetic improvement and sustainable development of the lotus seed industry. Full article
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22 pages, 15645 KB  
Article
Genome-Wide Analysis of Nelumbo nucifera UXS Family Genes: Mediating Dwarfing and Aquatic Salinity Tolerance
by Li Wang, Xingyan Zheng, Yajun Liu, Qian Mao, Yiwen Chen, Lin Zhao, Xiaomao Cheng, Longqing Chen and Huizhen Hu
Plants 2026, 15(1), 116; https://doi.org/10.3390/plants15010116 - 1 Jan 2026
Viewed by 417
Abstract
Nelumbo nucifera (Lotus) is an economically important aquatic crop frequently challenged by abiotic stresses. The plant cell wall, a primary interface with the environment, undergoes dynamic remodeling to balance structural integrity with adaptation. UDP-glucuronic acid decarboxylase (UXS), a key enzyme synthesizing the nucleotide [...] Read more.
Nelumbo nucifera (Lotus) is an economically important aquatic crop frequently challenged by abiotic stresses. The plant cell wall, a primary interface with the environment, undergoes dynamic remodeling to balance structural integrity with adaptation. UDP-glucuronic acid decarboxylase (UXS), a key enzyme synthesizing the nucleotide sugar precursor UDP-xylose, exists in distinct membrane-bound (e.g., Golgi) and cytosolic forms, channeling substrates into compartmentalized polysaccharide biosynthesis pathways and positioning the UXS family as a crucial regulator linking cell wall metabolism to plant adaptation. Here, we systematically characterized the NnUXS gene family in lotus through genome-wide identification, evolutionary synteny analysis, and functional validation. Integrated bioinformatic analysis revealed their physicochemical properties, motif patterns, and regulatory cis-elements, suggesting potential roles in growth and salt stress responses. Among the family, NnUXS3 was prioritized due to its preferentially upregulated in small plant architecture (SPA) varieties, its early induction under salt stress (0.5 days, 200 mM NaCl), and its highest predicted binding affinity for UDP-GlcA (−8.9 kcal/mol). Subsequent functional validation confirmed its dual role: heterologous overexpression in tobacco reduced plant height (47.22%) and leaf area (67.61%), while transient overexpression in lotus enhanced salt tolerance and shortened the petioles. This enhanced tolerance was achieved by upregulating key genes involved in polysaccharide biosynthesis (NnCSLC4, NnXTH22, NnCESA1) and antioxidant defense (NnSOD, NnPOD). Our findings establish NnUXS3 as a key mediator in balancing plant architecture and abiotic stress resilience. This work not only identifies a valuable genetic target for lotus breeding but also provides insights into the growth-stress trade-off, highlighting the importance of UXS subcellular localization in tailoring cell wall remodeling for environmental adaptation. Full article
(This article belongs to the Section Plant Genetics, Genomics and Biotechnology)
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22 pages, 880 KB  
Article
Chemical Composition and Bioactivity of Nelumbo nucifera Gaertn. Flower Extract Fractions: In Vitro Antioxidant and Anti-Inflammatory Properties
by Jung Ha Choo, So Young Lee, Kyoungin Min and Nae Gyu Kang
Curr. Issues Mol. Biol. 2025, 47(12), 1065; https://doi.org/10.3390/cimb47121065 - 18 Dec 2025
Viewed by 381
Abstract
With the aging global population, interest in skin aging and skin health products is increasing. Nelumbo nucifera Gaertn. (lotus) has been widely used for its pharmacological benefits, including antioxidant, anti-inflammatory, skin-whitening, and anti-aging properties. In this study, we aimed to develop a safe [...] Read more.
With the aging global population, interest in skin aging and skin health products is increasing. Nelumbo nucifera Gaertn. (lotus) has been widely used for its pharmacological benefits, including antioxidant, anti-inflammatory, skin-whitening, and anti-aging properties. In this study, we aimed to develop a safe and biologically active extract by extracting lotus flowers with hot water, followed by sequential fractionation using porous resin chromatography with stepwise ethanol elution (100% water and 30%, 70%, and 100% ethanol). The 30% and 70% ethanol fractions showed the highest total polyphenol and flavonoid contents. Liquid chromatography–electrospray ionization–mass spectrometry analysis identified major flavonoids, including myricetin and quercetin derivatives, in these fractions. These fractions were combined to formulate a novel Nelumbo nucifera flower extract (NFE), which exhibited potent antioxidant activity confirmed by 2,2-diphenyl-1-picrylhydrazyl, 2,2′-azinobis(3-ethylbenzothiazoline-6-sulfonic acid) and ferric reducing antioxidant power assays. NFE significantly inhibited nitric oxide and prostaglandin E2 secretion in lipopolysaccharide-activated murine RAW264.7 macrophages. In human keratinocytes HaCaT cells, NFE reduced tumor necrosis factor-α-induced expression and secretion of the pro-inflammatory cytokines interleukin (IL)-6 and IL-8 without cytotoxicity. These findings demonstrate that NFE has strong in vitro antioxidant and anti-inflammatory activities, supporting its potential as a bioactive ingredient for application in improving skin health preparations. Full article
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18 pages, 11141 KB  
Article
Green Extraction of Lotus Leaf (Nelumbo nucifera Gaertn) Polyphenols: Unraveling the Mechanism of Ultrasound-Assisted Deep Eutectic Solvents
by Jing Sun, Mengqi Qin, Luyang Chen, Xin Li, Xinyan Wu, Gang Ye, Jianjun Deng and Haixia Yang
Foods 2025, 14(23), 4045; https://doi.org/10.3390/foods14234045 - 25 Nov 2025
Viewed by 852
Abstract
Deep eutectic solvents (DESs) have attracted considerable attention in recent years because of their cost-effectiveness, safety, and sustainability. In this study, we developed 19 DESs for the extraction of antioxidant polyphenolic compounds from lotus leaves, utilizing ultrasound-assisted extraction (UAE). Among the DESs examined, [...] Read more.
Deep eutectic solvents (DESs) have attracted considerable attention in recent years because of their cost-effectiveness, safety, and sustainability. In this study, we developed 19 DESs for the extraction of antioxidant polyphenolic compounds from lotus leaves, utilizing ultrasound-assisted extraction (UAE). Among the DESs examined, choline chloride (ChCl) and lactic acid (ChCl: lactic acid) exhibited the highest extraction efficiency. The optimal conditions were established as follows: molar ratio of 1:2.6, solid-to-liquid ratio of 1:20 g/mL, water content of 8%, and ultrasound time of 65 min, which proved to be more efficient than conventional extraction methods such as water and ethanol. Under the optimal conditions, the total phenolic content (TPC) was 187.23 ± 14.67 mg GAE/g DW, and the extracts exhibited high antioxidant activity (DPPH IC50: 0.92 ± 0.23 mg/mL; FRAP: 21.56 ± 3.05 mg Trolox/g DW). This superiority arises from the formation of robust hydrogen bonds between ChCl and lactic acid, in conjunction with improved mass transfer efficiency. This study provides a green alternative method for polyphenol extraction from lotus leaves. Full article
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22 pages, 4332 KB  
Article
Vasorelaxant and Hypotensive Mechanisms of Nelumbo nucifera Seed Extract: Roles of Nitric Oxide, Calcium Channel Blockade and eNOS Interaction with Active Compounds
by Usana Chatturong, Nitra Nuengchamnong, Anjaree Inchan, Kittiwoot To-On, Tippaporn Bualeong, Wiriyaporn Sumsakul, Anyapat Atipimonpat, Kittiphum Meekarn, Yasuteru Shigeta, Kowit Hengphasatporn, Sarawut Kumphune and Krongkarn Chootip
Pharmaceuticals 2025, 18(10), 1500; https://doi.org/10.3390/ph18101500 - 6 Oct 2025
Viewed by 1278
Abstract
Background/Objectives: Enhancing endothelial nitric oxide (NO) bioavailability through natural products may provide a promising strategy for the prevention and management of hypertension. This study investigated the phytochemical composition of ethanolic lotus (Nelumbo nucifera) seed extract (LSE), its vasorelaxant mechanisms, effects on [...] Read more.
Background/Objectives: Enhancing endothelial nitric oxide (NO) bioavailability through natural products may provide a promising strategy for the prevention and management of hypertension. This study investigated the phytochemical composition of ethanolic lotus (Nelumbo nucifera) seed extract (LSE), its vasorelaxant mechanisms, effects on endothelial NO production, and antihypertensive activity. Methods: LSE was characterized via LC-ESI-QTOF-MS using accurate mass data and fragmentation patterns. Vasorelaxant effects were evaluated in isolated rat aortas, and the underlying mechanisms were explored using pharmacological inhibitors. NO production was assessed in human endothelial EA.hy926 cells. Hypotensive activity was examined in normotensive rats following intravenous administration of LSE (10, 30, and 100 mg/kg). Molecular docking was performed to analyze interactions between LSE bioactive compounds and endothelial nitric oxide synthase (eNOS). Results: LC-ESI-QTOF-MS analysis identified 114 compounds, including primary and secondary metabolites. LSE induced vasorelaxation in endothelium-intact aortas, which was reduced by endothelium removal (p < 0.001) and by L-NAME (p < 0.001). LSE also inhibited receptor-operated, Ca2+ channel-mediated vasoconstriction (p < 0.05). In vivo, LSE decreased blood pressure in a dose-dependent manner. In EA.hy926 cells, LSE (750 and 1000 µg/mL) increased NO production, an effect attenuated by L-NAME. Molecular docking showed that LSE alkaloids, including nelumborine, nelumboferine, neferine, and isoliensinine had strong affinities for binding with eNOS at the tetrahydrobiopterin (BH4) binding site. Nelumborine exhibited the highest affinity, suggesting its potential as an eNOS modulator. Conclusions: LSE promotes vasorelaxation through the stimulation of endothelium-derived NO release and Ca2+ influx inhibition, contributing to blood pressure reduction. These findings support LSE as a potential natural antihypertensive supplement. Full article
(This article belongs to the Section Natural Products)
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20 pages, 6446 KB  
Article
The Heavy Metal-Associated Isoprenylated Plant Protein (HIPP) Gene Family Plays a Crucial Role in Cadmium Resistance in Lotus (Nelumbo nucifera G.)
by Chunyan Gao, Yuxuan Zhu, Hualei Xu, Xinyue Peng, Kaili Yu, Xi Gu, Yan Xiao, Jian Cai and Yinjie Wang
Horticulturae 2025, 11(9), 1136; https://doi.org/10.3390/horticulturae11091136 - 18 Sep 2025
Viewed by 1204
Abstract
Cadmium (Cd) contamination poses significant threats to aquatic ecosystems. Heavy metal-associated isoprenylated plant proteins (HIPPs) are plant-specific chaperones involved in metal ion homeostasis and stress adaptation. Lotus is an aquatic plant with high biomass and Cd accumulation capacity, showing great potential in water [...] Read more.
Cadmium (Cd) contamination poses significant threats to aquatic ecosystems. Heavy metal-associated isoprenylated plant proteins (HIPPs) are plant-specific chaperones involved in metal ion homeostasis and stress adaptation. Lotus is an aquatic plant with high biomass and Cd accumulation capacity, showing great potential in water remediation. However, the functional characterization of HIPPs in lotus remains unexplored, limiting its application in phytoremediation. We conducted comprehensive characterization of NnHIPP genes in lotus, integrating comparative genomics, Cd-stress transcriptomics, and heterologous expression assays in transgenic yeast. This study identified 33 NnHIPP genes classified into five subfamilies with conserved motifs and structures. Synteny analysis revealed closer evolutionary relationships with dicots (Arabidopsis and Medicago sativa) than monocots. Abundant stress-responsive elements were found in NnHIPPs promoters. Tissue-specific expression profilings indicated functional diversification across organs and developmental stages. Our transcriptome analysis revealed that most NnHIPPs responded to Cd stress, with stronger induction in roots than leaves. Four Cd-induced NnHIPPs (NnHIPP10/14/21/33) showed both plasma membrane and nuclear localization. Notably, NnHIPP14, NnHIPP21, and NnHIPP33 conferred varying degrees of Cd tolerance when overexpressed in yeast. Our study demonstrates that NnHIPPs participate in Cd stress response. Three candidate NnHIPP genes are proposed for genetic engineering to enhance phytoremediation efficiency in lotus. Full article
(This article belongs to the Topic Genetic Breeding and Biotechnology of Garden Plants)
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15 pages, 3907 KB  
Article
High-Dosage Gamma Irradiation Alters Lotus (Nelumbo nucifera Gaertn.) Seedling Structure: A Morphological and Anatomical Perspective
by Pornsawan Sutthinon, Piyanuch Orpong, Paveena Kaewubon, Sureerat Yenchon, Orawan Detrueang and Sutthinut Soonthornkalump
Int. J. Plant Biol. 2025, 16(3), 101; https://doi.org/10.3390/ijpb16030101 - 3 Sep 2025
Viewed by 1497
Abstract
The lotus (Nelumbo nucifera Gaertn.) is an ornamental aquatic plant, highly valued in Asian cultures for its religious symbolism, culinary uses, and medicinal properties. However, the lotus exhibits low genetic diversity in nature, which limits the genetic resources available for breeding programs. [...] Read more.
The lotus (Nelumbo nucifera Gaertn.) is an ornamental aquatic plant, highly valued in Asian cultures for its religious symbolism, culinary uses, and medicinal properties. However, the lotus exhibits low genetic diversity in nature, which limits the genetic resources available for breeding programs. Gamma irradiation is an effective method for inducing genetic variation in lotus breeding. The present study examines the gamma sensitivity of lotus seedlings, along with the morphological and anatomical changes induced by various gamma dosages. The results showed that high-dose gamma irradiation (≥100 Gy) significantly inhibited seedling growth and altered most anatomical parameters, each exhibiting distinct dose–response patterns except for midrib diameter. The 100 Gy treatment resulted in the maximum stem diameter, while root diameter peaked at 500 Gy, and the highest dose (600 Gy) produced the largest petioles. Gamma irradiation also triggered tannin accumulation and reduced aerenchyma formation in the leaves. The obtained results demonstrate organ-specific responses to gamma irradiation in the lotus, with leaves being the most sensitive, while petioles, stems, and roots exhibited more variable dose-dependent effects. Full article
(This article belongs to the Section Plant Reproduction)
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23 pages, 1936 KB  
Review
Neuroprotective Potential of Major Alkaloids from Nelumbo nucifera (Lotus): Mechanisms and Therapeutic Implications
by Douyang Zhao, Linlin Ma, Jeremy Brownlie, Kathryn Tonissen, Yang Pan and Yunjiang Feng
Int. J. Mol. Sci. 2025, 26(17), 8280; https://doi.org/10.3390/ijms26178280 - 26 Aug 2025
Cited by 1 | Viewed by 2789
Abstract
Nelumbo nucifera (lotus) has long been used in traditional medicine across Asia, and its bioactive alkaloids have recently garnered attention for their neuroprotective properties. This review summarizes the current research on the mechanisms by which lotus-derived alkaloids, particularly neferine, nuciferine, liensinine, and isoliensinine, [...] Read more.
Nelumbo nucifera (lotus) has long been used in traditional medicine across Asia, and its bioactive alkaloids have recently garnered attention for their neuroprotective properties. This review summarizes the current research on the mechanisms by which lotus-derived alkaloids, particularly neferine, nuciferine, liensinine, and isoliensinine, protect neural tissues. These compounds exhibit a wide range of pharmacological activities, including antioxidant and anti-inflammatory effects, regulation of calcium signaling and ion channels, promotion of neurogenesis, and modulation of key neurotransmitter systems, such as dopaminergic, cholinergic, and GABAergic pathways. Notably, they attenuate tau hyperphosphorylation, reduce oxidative stress-induced neuronal apoptosis, and enhance neurotrophic signaling via BDNF-related pathways. While antioxidant and anti-inflammatory actions are the most extensively studied, emerging evidence also highlights their roles in autophagy modulation and mitochondrial protection. Together, these findings suggest that lotus alkaloids are promising candidates for the prevention and treatment of neurodegenerative diseases, such as Alzheimer’s and Parkinson’s diseases. Further investigation is warranted to explore the synergistic mechanisms and potential clinical applications of these compounds. Full article
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19 pages, 6194 KB  
Article
Effect of Polylactic Acid (PLA) Blends on Cellulose Degradable Plastics from the Lotus Stem (Nelumbo nucifera)
by Rozanna Dewi, Novi Sylvia, Muhammad Subhan, Budhi Santri Kusuma, Aldila Ananda, Medyan Riza, Januar Parlaungan Siregar, Choon Kit Chan, Tezara Cionita and Elsherif Emad Ahmed Abdelrahman
Polymers 2025, 17(17), 2281; https://doi.org/10.3390/polym17172281 - 23 Aug 2025
Cited by 3 | Viewed by 1665
Abstract
Lotus stems contain cellulose, which can be utilized as a base material for producing green products, specifically degradable plastics. This research investigates the effect of polylactic acid (PLA) blends on cellulose degradable plastics from the lotus stem (Nelumbo nucifera). The mechanical [...] Read more.
Lotus stems contain cellulose, which can be utilized as a base material for producing green products, specifically degradable plastics. This research investigates the effect of polylactic acid (PLA) blends on cellulose degradable plastics from the lotus stem (Nelumbo nucifera). The mechanical characteristics are as follows: tensile strength of 0.7703–3.3212 MPa, elongation of 0.58–1.16%, Young’s modulus of 78.7894–364.6118 MPa. Compound analysis showed the presence of O-H, C-C, and C=O groups, and the presence of microbial activity in the soil can also lead to the degradation of these groups due to their hydrophilic nature, which allows them to bind water. Thermal analysis within a temperature range of 413.24 °C to 519.80 °C, shows that significant weight loss begins with the formation of crystalline structures. The degradable plastic exhibiting the lowest degree of swelling consists of 1 g of cellulose and 8 g of PLA, resulting in a swelling value of 6.25%. The degradable plastic is anticipated to decompose most rapidly after 52 days, utilizing 2 g of PLA and 7 g of cellulose. This complies with standard requirement, which sets a maximum degradation period of 180 days for polymers. Full article
(This article belongs to the Special Issue Advanced Cellulose Polymers and Derivatives)
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18 pages, 1227 KB  
Article
Assessment of Biomethane Potential from Waste Activated Sludge in Swine Wastewater Treatment and Its Co-Digestion with Swine Slurry, Water Lily, and Lotus
by Sartika Indah Amalia Sudiarto, Hong Lim Choi, Anriansyah Renggaman and Arumuganainar Suresh
AgriEngineering 2025, 7(8), 254; https://doi.org/10.3390/agriengineering7080254 - 7 Aug 2025
Cited by 1 | Viewed by 1848
Abstract
Waste activated sludge (WAS), a byproduct of livestock wastewater treatment, poses significant disposal challenges due to its low biodegradability and potential environmental impact. Anaerobic digestion (AD) offers a sustainable approach for methane recovery and sludge stabilization. This study evaluates the biomethane potential (BMP) [...] Read more.
Waste activated sludge (WAS), a byproduct of livestock wastewater treatment, poses significant disposal challenges due to its low biodegradability and potential environmental impact. Anaerobic digestion (AD) offers a sustainable approach for methane recovery and sludge stabilization. This study evaluates the biomethane potential (BMP) of WAS and its co-digestion with swine slurry (SS), water lily (Nymphaea spp.), and lotus (Nelumbo nucifera) shoot biomass to enhance methane yield. Batch BMP assays were conducted at substrate-to-inoculum (S/I) ratios of 1.0 and 0.5, with methane production kinetics analyzed using the modified Gompertz model. Mono-digestion of WAS yielded 259.35–460.88 NmL CH4/g VSadded, while co-digestion with SS, water lily, and lotus increased yields by 14.89%, 10.97%, and 16.89%, respectively, surpassing 500 NmL CH4/g VSadded. All co-digestion combinations exhibited synergistic effects (α > 1), enhancing methane production beyond individual substrate contributions. Lower S/I ratios improved methane yields and biodegradability, highlighting the role of inoculum availability. Co-digestion reduced the lag phase limitations of WAS and plant biomass, improving process efficiency. These findings demonstrate that co-digesting WAS with nutrient-rich co-substrates optimizes biogas production, supporting sustainable sludge management and renewable energy recovery in livestock wastewater treatment systems. Full article
(This article belongs to the Section Sustainable Bioresource and Bioprocess Engineering)
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16 pages, 1991 KB  
Article
Antihypertensive Effects of Lotus Seed (Nelumbo nucifera Gaertn.) Extract via eNOS Upregulation and Oxidative Stress Reduction in L-NAME-Induced Hypertensive Rats
by Anjaree Inchan, Tippaporn Bualeong, Worasak Kaewkong, Nitra Nuengchamnong, Phapada Apaikawee, Pakaporn Sa-Nguanpong, Wiriyaporn Sumsakul, Natthawut Charoenphon, Usana Chatturong, Watcharakorn Deetud and Krongkarn Chootip
Pharmaceuticals 2025, 18(8), 1156; https://doi.org/10.3390/ph18081156 - 4 Aug 2025
Cited by 3 | Viewed by 3061
Abstract
Background/Objectives: Nelumbo nucifera Gaertn. (lotus) seeds have traditionally been used to treat hypertension, though their mechanisms remain unclear. This study investigated the antihypertensive effects of lotus seed extract (LSE) and its mechanisms in rats with Nω-nitro-L-arginine methyl ester (L-NAME)-induced hypertension. [...] Read more.
Background/Objectives: Nelumbo nucifera Gaertn. (lotus) seeds have traditionally been used to treat hypertension, though their mechanisms remain unclear. This study investigated the antihypertensive effects of lotus seed extract (LSE) and its mechanisms in rats with Nω-nitro-L-arginine methyl ester (L-NAME)-induced hypertension. Methods: Male Sprague Dawley rats received L-NAME (40 mg/kg/day) in drinking water and were treated orally with LSE (5, 10, or 100 mg/kg/day), captopril (5 mg/kg/day), or a combination of LSE and captopril (2.5 mg/kg/day each) for 5 weeks. Hemodynamic parameters and histological changes in the left ventricle and aorta were assessed. Mechanistic studies included measurements of plasma nitric oxide (NO) metabolites, malondialdehyde (MDA), superoxide dismutase (SOD) activity, angiotensin II (Ang II), angiotensin-converting enzyme (ACE) activity, and protein expression via western blot. Results: L-NAME elevated systolic blood pressure and induced cardiovascular remodeling, oxidative stress, and renin-angiotensin system activation. LSE treatment reduced blood pressure, improved antioxidant status, increased NO bioavailability, and downregulated gp91phox and AT1R expression. The combination of low-dose LSE and captopril produced stronger effects than LSE alone, with efficacy comparable to captopril. Conclusions: These findings suggest that LSE exerts antihypertensive effects via antioxidant activity and inhibition of the renin-angiotensin system, supporting its potential as an adjunct therapy for hypertension. Full article
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16 pages, 3996 KB  
Article
Genes Associated with the Accumulation of Proanthocyanidins in Nelumbo nucifera Gaertn
by Wanyue Zhao, Lin Zhao, Shaoyuan Chen, Ruimin Nie, Yi Xu and Longqing Chen
Agriculture 2025, 15(15), 1674; https://doi.org/10.3390/agriculture15151674 - 2 Aug 2025
Viewed by 698
Abstract
Proanthocyanidins are a subclass of flavonoids formed through a poorly understood polymerization process that forms chains of 3–30 catechins and epi-catechins. Proanthocyanidins serve as UV protectants and antifeedants that accumulate in diverse plant species, including the lotus. To identify candidate genes underlying proanthocyanidin [...] Read more.
Proanthocyanidins are a subclass of flavonoids formed through a poorly understood polymerization process that forms chains of 3–30 catechins and epi-catechins. Proanthocyanidins serve as UV protectants and antifeedants that accumulate in diverse plant species, including the lotus. To identify candidate genes underlying proanthocyanidin synthesis and polymerization, we generated and functionally annotated transcriptomes from seedpods and seed epicarps of two lotus cultivars, “Guoqing Hong” and “Space Lotus”, which accumulate markedly divergent proanthocyanidin levels across the immature, near-mature, and mature developmental stages. Our transcriptome analysis was based on a total of 262.29 GB of raw data. We aligned the transcriptome data with the lotus genome and obtained an alignment efficiency that ranged from 91.74% to 96.44%. Based on the alignment results, we discovered 4774 new genes and functionally annotated 3232 genes. A total of 14,994 differentially expressed genes (DEGs) were identified from two-by-two comparisons of transcript libraries. We found 61 DEGs in the same developmental stage in the same tissue of different species. Comparative transcriptome analysis of seedpods and seed epicarps from two cultivars identified 14,994 differentially expressed genes (DEGs), of which 10 were functionally associated with proanthocyanidin synthesis and 9 were possibly implicated in the polymerization reactions. We independently quantified the expression of the candidate genes using qRT-PCR. Significant differences in the expression of candidate genes in different tissues and periods of lotus species are consistent with particular genes contributing to the polymerization of catechins and epi-catechins into proanthocyanidins in lotus seedpods and seed epicarps. Full article
(This article belongs to the Section Crop Genetics, Genomics and Breeding)
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15 pages, 2979 KB  
Article
A Metabolomics Exploration of Young Lotus Seeds Using Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging
by Ying Chen, Xiaomeng Xu and Chunping Tang
Molecules 2025, 30(15), 3242; https://doi.org/10.3390/molecules30153242 - 1 Aug 2025
Cited by 1 | Viewed by 1937
Abstract
Lotus (Nelumbo nucifera Gaertn.) is a quintessential medicinal and edible plant, exhibiting marked differences in therapeutic effects among its various parts. The lotus seed constitutes a key component of this plant. Notably, the entire seed and the plumule display distinct medicinal properties. [...] Read more.
Lotus (Nelumbo nucifera Gaertn.) is a quintessential medicinal and edible plant, exhibiting marked differences in therapeutic effects among its various parts. The lotus seed constitutes a key component of this plant. Notably, the entire seed and the plumule display distinct medicinal properties. To investigate the “homologous plants with different effects” phenomenon in traditional Chinese medicine, this study established a Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging (MALDI-MSI) method. This study employed immature lotus seeds as the experimental material, diverging from the mature seeds conventionally used. Conductive double-sided tape was employed for sample preparation, and complete longitudinal sections of the seeds were obtained, followed by MALDI-MSI analysis to identify and visualize the spatial distribution of characteristic secondary metabolites within the entire seeds. The results unveiled the diversity of metabolites in lotus seeds and their differential distribution across tissues, with pronounced distinctions in the plumule. A total of 152 metabolites spanning 13 categories were identified in lotus seeds, with 134, 89, 51, and 98 metabolites discerned in the pericarp, seed coat, cotyledon, and plumule, respectively. Strikingly, young lotus seeds were devoid of liensinine/isoliensinine and neferine, the dominant alkaloids of mature lotus seed plumule, revealing an early-stage alkaloid profile that sharply contrasts with the well-documented abundance found in mature seeds and has rarely been reported. We further propose a biosynthetic pathway to explain the presence of the detected benzylisoquinoline and the absence of the undetected bisbenzylisoquinoline alkaloids in this study. These findings present the first comprehensive metabolic atlas of immature lotus seeds, systematically exposing the pronounced chemical divergence from their mature counterparts, and thus lays a metabolomic foundation for dissecting the spatiotemporal mechanisms underlying the nutritional and medicinal value of lotus seeds. Full article
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17 pages, 7009 KB  
Article
The Tissue Expression Divergence of the WUSCHEL-Related Homeobox Gene Family in the Evolution of Nelumbo
by Juanjuan Li and Yue Zhang
Plants 2025, 14(13), 1909; https://doi.org/10.3390/plants14131909 - 21 Jun 2025
Cited by 1 | Viewed by 911
Abstract
The yellow flower lotus (Nelumbo lutea) is the sister species of the sacred lotus (N. nucifera). The evolution of gene expression patterns across multiple tissues during the species divergence of these two lotuses remains unexplored. The WUSCHEL-related homeobox ( [...] Read more.
The yellow flower lotus (Nelumbo lutea) is the sister species of the sacred lotus (N. nucifera). The evolution of gene expression patterns across multiple tissues during the species divergence of these two lotuses remains unexplored. The WUSCHEL-related homeobox (WOX) family, a plant-specific transcription factor family, plays a crucial role in tissue development and stress responses. In this study, utilizing a chromosome-level reference genome and a transcriptome database covering multiple tissues, we identified and categorized 11 NlWOX genes into three subfamilies. We identified seven syntenic gene pairs between NnWOXs and NlWOXs that originated from whole-genome duplications. Through conserved motif analysis, we found subfamily-specific motifs in the protein sequences of NnWOXs and NlWOXs. Variations in the three-dimensional conformations of homologous WOX genes indicate function divergences between the two lotus species. The gene expression matrix of NlWOX across tissues reveals expression divergences within N. lutea and between the two lotus species. By employing a weight gene co-expression network analysis pipeline, we developed eight NlWOX co-expression networks that differed from the co-expression networks of their syntenic genes. Overall, our findings suggest that genomic variations in the WOX orthologs contribute to the distinct expression patterns and regulatory networks observed during the evolution of these two lotuses. Full article
(This article belongs to the Section Plant Genetics, Genomics and Biotechnology)
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25 pages, 857 KB  
Article
Amphiphilic Bioactives of Freshwater Aquatic Plants Nelumbo nucifera (Indian Lotus) and Lemna sp. with Antioxidant, Anti-Inflammatory and Antithrombotic Activities: In Vitro Study
by Marina Seferli, Melina Lefkaki, Vasileios Manousakis, Anna Ofrydopoulou, Katie Shiels, Sushanta Kumar Saha, Grigorios Krey, Nikolaos Kamidis, Nikolaos Stamatis, Chryssa Anastasiadou and Alexandros Tsoupras
Pharmaceuticals 2025, 18(6), 835; https://doi.org/10.3390/ph18060835 - 2 Jun 2025
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Abstract
Background-Objectives: Chronic diseases linked to inflammation, such as cardiovascular disease (CVD) and cancer, continue to pose major public health challenges due to their high mortality rates. There is growing interest in natural bioactive compounds, particularly those derived from plants, as potential therapeutic or [...] Read more.
Background-Objectives: Chronic diseases linked to inflammation, such as cardiovascular disease (CVD) and cancer, continue to pose major public health challenges due to their high mortality rates. There is growing interest in natural bioactive compounds, particularly those derived from plants, as potential therapeutic or preventive agents due to their low toxicity profiles. This study aimed to explore two freshwater plants—Nelumbo nucifera (Indian lotus) and Lemna sp.—as potential sources of bioactive compounds with antioxidant, anti-inflammatory, and antithrombotic properties. While N. nucifera has established but incompletely characterized biofunctional properties, Lemna sp. remains largely unexplored in this context. Methods: Amphiphilic extracts from both plant species were analyzed for phenolic and lipid constituents, including unsaturated fatty acids, polar lipids, and carotenoids. Antioxidant capacity was evaluated using DPPH, ABTS, and FRAP assays. Anti-inflammatory and antithrombotic activities were assessed via platelet aggregation assays using PAF and ADP agonists. Structural characterization was performed using Fourier transform infrared spectroscopy (FT-IR) and liquid chromatography–mass spectroscopy (LC-MS) to support structure–activity relationship (SAR) analysis. Results: Extracts, particularly from Lemna sp., showed potent antiplatelet activity against PAF and ADP. LC-MS revealed the presence of polar lipids rich in monounsaturated and omega-3 polyunsaturated fatty acids, with a favorable omega-6/omega-3 ratio, especially in Lemna sp., correlating with strong anti-inflammatory potential. High levels of total phenolics and carotenoids were observed, aligning with substantial antioxidant capacity in both species. Conclusions: These findings suggest that N. nucifera and Lemna sp. are promising sources of bioactive compounds with potential applications in functional foods, cosmetics, and pharmaceuticals targeting inflammation- and thrombosis-related chronic diseases. Further studies are warranted to confirm their safety and efficacy. Full article
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