Search Results (281)

Staphylococcus aureus (S. aureus) is a common pathogen that threatens healthcare and food safety. Vine tea extract (VTE) and its major active component, dihydromyricetin (DMY), show antibacterial activity. However, their mechanisms of action are not fully understood. In this study, we combined proteomics and lipidomics, with RT–qPCR validation of selected differentially expressed genes, to investigate how DMY and VTE affect S. aureus. Proteomics identified 210 and 535 differentially expressed proteins (DEPs) in the DMY-treated and VTE-treated groups, respectively. These DEPs were mainly enriched in cell wall- and membrane-associated pathways. DMY markedly increased proteins involved in fatty acid degradation, glyceride metabolism, and cell wall synthesis. In contrast, VTE increased proteins related to heme/iron acquisition and cell wall degradation. In addition, VTE altered proteins involved in pyrimidine metabolism and aminoacyl-tRNA biosynthesis, suggesting that non-DMY components in VTE may contribute to the antibacterial activity through additional pathways. Lipidomics further indicated membrane lipid remodeling, including increased fatty acid unsaturation and shorter acyl chain length. Collectively, DMY and VTE may inhibit S. aureus growth by remodeling membrane lipids and disturbing cell wall–cell membrane homeostasis. These findings provide mechanistic support for further development of DMY and VTE as natural antimicrobial candidates. Full article

Milk fat globule membrane (MFGM) phospholipids could promote the development of infants’ brain, nervous system and digestive system. This research conducted a comparative analysis of phospholipid composition in MFGM of colostrum from different bovine species (Holstein cattle, yak, and Buffalo), with a particular focus on analyzing phospholipid variations in yak MFGM across different lactation stages. Chromatographic quantification revealed phosphatidylcholine (PC) as the predominant phospholipid class (34.7–47.44%) in all examined species. Notably, Holstein cow milk contains significantly higher levels of phosphatidylethanolamine (PE). Distinct phospholipid profiles emerged between species: yak milk demonstrated significantly higher concentrations of sphingomyelin (SM), lysophosphatidylethanolamine (LPE), dimethylphosphatidylethanolamine (dMePE), and bis-methylphosphatidic acid (BisMePA), whereas buffalo milk showed preferential accumulation of phosphatidylinositol (PI), phosphatidylserine (PS), phosphatidylglycerol (PG), and lysophosphatidylcholine (LPC). Longitudinal analysis revealed dynamic changes in yak milk phospholipids during lactation: as the lactation period in-creases, PC, PS, LPC, LPE, methylphosphatidylcholine (MePC), BisMePA, and dMePE exhibited progressive decline, while PE, SM, PI and PG showed incremental increases. Analysis of phospholipid metabolism pathways indicates that yak colostrum supports early calf development by enriching phospholipids associated with immune and neuroprotection, while mature milk shifts toward maintaining membrane stability. These compositional characteristics position yak milk as a promising phospholipid-fortified alternative to human breast milk. Full article

The increasing contamination of agricultural soils with microplastics (MPs) represents an emerging environmental challenge. While conventional plastics such as low-density polyethylene (LDPE) persist for decades, biodegradable alternatives like polybutylene adipate terephthalate (PBAT) are promoted as eco-friendly solutions. However, their environmental safety for crop plants and soil microbiota remains poorly understood. In this study, we evaluated the effects of LDPE and PBAT microplastics (1% w/w) on the growth and physiological state of winter wheat (Triticum aestivum L.) cultivated in soil, either alone or in combination with the herbicide 2,4-dichlorophenoxyacetic acid (2,4-D) and the plant-beneficial fungus Trichoderma citrinoviride. Growth parameters (root and shoot length and mass), germination index, chlorophyll content, antioxidant enzyme activity, and lipidomic profiles of wheat were assessed. PBAT stimulated biomass accumulation but simultaneously triggered oxidative stress and remodeled membrane phospholipids, indicating physiological disturbance. T. citrinoviride enhanced wheat growth and mitigated oxidative stress under non-contaminated conditions; however, its beneficial effect was generally suppressed in the presence of PBAT and/or 2,4-D. The results suggest that, despite its biodegradability, PBAT may pose a higher phytotoxic potential than conventional LDPE, particularly by altering oxidative balance and membrane lipid composition in wheat. Full article

Bovine milk is a complex biological fluid whose lipid fraction plays essential roles in nutrition, processing, and product quality. While conventional analyses have traditionally focused on total fat content and fatty acid composition, recent advances in liquid chromatography–mass spectrometry (LC–MS) have unveiled the molecular diversity of polar lipids, particularly phospholipids and sphingolipids. These compounds, largely associated with the milk fat globule membrane (MFGM), include key molecular species such as phosphatidylcholine (PC), phosphatidylethanolamine (PE), sphingomyelin (SM), ceramides (Cer), and lysophospholipids, which collectively contribute to emulsion stability, flavor development, and bioactive functionality. This review summarizes current progress in the determination of sphingolipids and phospholipids in bovine milk, with a specific focus on analytical strategies enabling their accurate detection, identification, and quantification. We discuss how advanced LC–MS platforms have been applied to investigate factors shaping the milk polar lipidome, including lactation stage, animal diet, metabolic and inflammatory stress, and technological processing. Accumulating evidence indicates that specific lipid species and ratios, such as PC/PE balance, SM and ceramide profiles, and Lyso-PC enrichment, act as sensitive molecular indicators of membrane integrity, oxidative status, heat stress, and processing history. From an applied perspective, these lipidomic markers hold strong potential for dairy quality control, shelf-life assessment, and authenticity verification. Overall, advanced lipidomics provides a robust analytical framework to translate molecular-level lipid signatures into actionable tools for monitoring cow health, technological performance, and the nutritional valorization of bovine milk. Full article

Mammalian oocyte maturation is a metabolically demanding process relying on lipid metabolism that supplies energy, structural substrates, and signaling mediators. However, a comprehensive cross-species understanding of the dynamic requirement for lipids during this process remains elusive, hindering the optimization of assisted reproductive technologies. Utilizing an integrated single-cell transcriptomic and targeted lipidomic approach, we mapped the metabolic landscape of bovine oocyte maturation. Our analysis uncovered a global transcriptional downregulation, with 3259 genes suppressed during the transition from the germinal vesicle (GV) to the metaphase II (MII) stage. This was particularly apparent in lipid catabolism pathways (e.g., for ACAA1), while mitochondrial energy production genes (ATP6) were upregulated. Lipidomics indicated a selective depletion of saturated fatty acids (SFAs; e.g., C16:0, C18:0) in MII oocytes, while monounsaturated (MUFAs) and polyunsaturated fatty acids (PUFAs) were preferentially retained. Integrated network analysis specified hexadecanoic acid (C16:0) as a central metabolic hub, which rewires its interactions from biosynthetic genes (FASN, ELOVL6) in GV oocytes to degradative enzymes (ACADVL, HADH) in MII oocytes. Expanding to a cross-species transcriptomic atlas, we identified a core set of 59 lipid metabolism genes conserved across bovine, mouse, and human oocytes. Despite this conservation, we discovered stark species-specific regulatory strategies: bovine and human oocytes significantly downregulated fatty acid degradation and elongation post-maturation, whereas murine oocytes maintain pathway activity, upregulating key regulators like Acsl3. Our work unveils an evolutionarily conserved core lipid metabolic program in mammalian oocytes that is adaptively tuned to meet species-specific physiological demands. Bovine and human oocytes prioritize catabolic flexibility, using SFAs for energy, while mouse oocytes maintain their anabolic capacity for membrane biosynthesis. These findings provide a transformative resource for the field, offering biomarkers for oocyte quality and a rationale for enhancing species-tailored lipid formulations to develop in vitro maturation systems and amend reproductive outcomes in both agriculture and medicine. Full article

Lipids are essential biomolecules involved in membrane structure, energy storage, and intracellular signaling. Dysregulation of lipid metabolism (dyslipidemia) plays a central role in a wide spectrum of pediatric metabolic disorders, including both inherited and acquired conditions. Recent and rapid advances in mass spectrometry-based lipidomics have enabled high-resolution profiling of more than one-thousand lipid species, facilitating the discovery of disease-specific lipid signatures that were previously undetectable with conventional biochemical assays. In parallel, the rising prevalence of pediatric obesity, diabetes, asthma, metabolic dysfunction-associated steatotic liver disease (MASLD; formerly referred to as non-alcoholic fatty liver disease or NAFLD) and cancers has accelerated research aimed at uncovering molecular pathways underlying these conditions. Lipidomic approaches have also improved the identification and characterization of rare metabolic disorders. As analytical technologies continue to advance, lipidomics is poised to become a cornerstone of precision medicine in pediatrics, offering new opportunities for early diagnosis, risk stratification, and therapeutic targeting. Full article

Schwanniomyces etchellsii is an unconventional, halotolerant microorganism. Like some other yeasts, it can efficiently perform various biocatalytic transformations of organic compounds in seawater more effectively than in freshwater. In seawater, conversion rates are higher, by-product production is minimized, greater substrate loading is possible, and cells can be recycled for further use. To identify the molecular features that explain this behavior, comparative proteomic and lipidomic studies were conducted on cells grown in seawater and freshwater at various growth stages. The results showed higher expression of proteins involved in the stress response, such as glycerol-3-phosphate dehydrogenase, the glycerol transporter Stl1 and the P-type ATPase sodium pump Ena1, and several phospholipid biosynthesis proteins, including inositol-3-phosphate synthase and phosphatidate cytidylyltransferase, in seawater. Changes in metabolic enzymes and other proteins involved in responding to stimuli were also observed between the two conditions. Overall, cells grown in a freshwater medium exhibited higher levels of enzymes involved in biosynthetic processes. Differences in lipid profiles were also observed between cells grown in the two media. Higher levels of monoacyl and diacylglycerols were found in seawater, while higher levels of phospholipids containing serine and ethanolamine were found in freshwater. Consistent with more permeable membranes, cells grown in seawater exhibited lower levels of ergosterol. Full article

Evidence increasingly indicates that synaptic vesicle dysfunction emerges early in Parkinson’s disease (PD), preceding overt dopaminergic neuron loss rather than arising solely as a downstream consequence of neurodegeneration. α-Synuclein (αSyn), a presynaptic protein that regulates vesicle clustering, trafficking, and neurotransmitter release under physiological conditions, exhibits dose-, conformation-, and context-dependent actions that distinguish its normal regulatory roles from pathological effects observed in disease models. This narrative review synthesizes findings from a structured search of PubMed and Scopus, with emphasis on α-syn-knockout (αSynKO) and BAC transgenic (αSynBAC) mouse models, which do not recapitulate the full human PD trajectory but provide complementary insights into αSyn physiological function and dosage-sensitive vulnerability. Priority was given to studies integrating ultrastructural approaches—such as cryo-electron tomography, high-pressure freezing/freeze-substitution TEM, and super-resolution microscopy—with proteomic and lipidomic analyses. Across these methodologies, several convergent presynaptic alterations are consistently observed. In vivo and ex vivo studies associate αSyn perturbation with impaired vesicle acidification, consistent with altered expression or composition of vacuolar-type H⁺-ATPase subunits. Lipidomic analyses reveal age- and genotype-dependent remodeling of vesicle membrane lipids, particularly curvature- and charge-sensitive phospholipids, which may destabilize αSyn–membrane interactions. Complementary biochemical and cell-based studies support disruption of SNARE complex assembly and nanoscale release-site organization, while ultrastructural analyses demonstrate reduced vesicle docking, altered active zone geometry, and vesicle pool disorganization, collectively indicating compromised presynaptic efficiency. These findings support a synapse-centered framework in which presynaptic dysfunction represents an early and mechanistically relevant feature of PD. Rather than advocating αSyn elimination, emerging therapeutic concepts emphasize preservation of physiological vesicle function—through modulation of vesicle acidification, SNARE interactions, or membrane lipid homeostasis. Although such strategies remain exploratory, they identify the presynaptic terminal as a potential window for early intervention aimed at maintaining synaptic resilience and delaying functional decline in PD. Full article

Postharvest chilling injury (PCI) is a significant limitation in the storage of temperature-sensitive fruits, leading to quality deterioration and reduced marketability. However, low temperatures delay senescence—consistent with the Q10 principle, where metabolic reaction rates change 2–3-fold per 10 °C—and chilling-sensitive fruits experience membrane destabilization, oxidative imbalances, and structural degradation under cold stress. Physiological assessments consistently report elevated electrolyte leakage, increased malondialdehyde accumulation, and reduced membrane fluidity, coupled with disruptions in respiration and cellular energy metabolism. Biochemically, PCI is characterized by enhanced ROS production and a 20–50% decline in key antioxidant enzymes, along with disturbances in calcium signaling and hormone regulation. At the molecular level, chilling-responsive transcription factors such as CBF, CAM, HSF, and WRKY show strong induction, while lipid remodeling and epigenetic modifications further shape cold adaptation responses. Advances in multi-omics, including transcriptomics, proteomics, metabolomics, lipidomics, and volatilomics, have revealed chilling-associated metabolic shifts and regulatory cascades, enabling the identification of potential biomarkers of tolerance. Emerging mitigation strategies, including physical and chemical treatments, as well as CRISPR-based interventions, have shown a 30–60% reduction in PCI in controlled studies. This review synthesizes recent progress in physiology, molecular biochemistry, and postharvest technology to support future research and practical PCI management. Full article

Traumatic brain injury (TBI) is a major global health concern and a leading cause of mortality and disability. Head computed tomography (CT) remains indispensable for the detection of intracranial hemorrhage; however, its indiscriminate use in mild trauma increases radiation exposure, cumulative oncogenic risk, and healthcare costs. Consequently, there is growing interest in tools capable of improving sensitivity in mild or early-stage TBI. Protein-based biomarkers are promising complements to conventional assessment. Molecules such as glial fibrillary acidic protein (GFAP), ubiquitin C-terminal hydrolase L1 (UCH-L1), S100 calcium-binding protein B (S100B), and neurofilament light chain (NfL) reflect astroglial activation, neuronal injury, and axonal damage, enabling objective evaluation of neurotrauma. Beyond protein biomarkers, metabolomic and lipidomic approaches capture alterations associated with early metabolic distress, oxidative stress, mitochondrial dysfunction, and membrane disruption following TBI. High-resolution mass spectrometry studies have identified reproducible metabolite and lipid signatures correlating with injury severity and functional outcomes. Longitudinal profiling further reveals dynamic metabolic trajectories that distinguish secondary injury progression from stabilization, supporting predictive modeling and risk stratification. Together, these advances pave the way toward precision medicine in neurotrauma. Nevertheless, variability in assay performance and sampling timing continues to limit widespread clinical adoption. Future research should prioritize methodological standardization, analytical validation, and the integration of multi-omic data with machine learning–based predictive models. Full article

Depression is a multifactorial disorder shaped by genetic, psychosocial, and biological influences, with hypotheses ranging from monoamine deficiency and neuroplasticity deficits to inflammation and stress-induced dysregulation. St. John’s wort (Hypericum perforatum L.) has long been used as an herbal antidepressant and is supported by clinical evidence for efficacy and safety in mild-to-moderate depression. While its multimodal mechanisms have been linked to neurotransmitter reuptake inhibition, neuroendocrine regulation, and modulation of neuroplasticity, recent findings suggest an additional role at the membrane level. Emerging lipidomic studies highlight that Ze 117, a low-hyperforin H. perforatum extract, counteracts stress- and glucocorticoid-induced increases in membrane fluidity by modulating lipid composition and cholesterol metabolism. These effects normalize receptor mobility and signal transduction, particularly of β1-adrenoceptors, and modulate glycerophospholipid metabolism in both cellular and animal models. Such membrane-stabilizing properties may represent a novel mechanistic pathway complementing classical neurochemical actions. This review revisits the mechanisms of St. John’s wort with a special focus on its impact on membrane lipids, positioning lipidomics as a promising tool for elucidating antidepressant activity. These insights may open avenues toward personalized therapeutic strategies in depression. Full article

Lipids provide essential membrane components and energy sources for viral replication, playing multiple roles in viral infection. However, the mutual influence between lipid metabolism and PRRSV proliferation remains unclear. Using transcriptomics, lipidomics, BODIPY staining, and Western blot (WB) analysis, our findings revealed that PRRSV infection significantly altered the abundance of lipid-metabolism-associated genes and lipid metabolites in cells. qRT-PCR confirmed that PRRSV infection dose-dependently upregulated SREBP2 expression (p < 0.01), while BODIPY staining demonstrated a significant increase in intracellular lipid droplets post-infection (p < 0.01). Let-7f-5p significantly reduced lipid droplet accumulation and suppressed PRRSV N protein expression. Notably, 15 lipid species that were upregulated during PRRSV infection were downregulated by let-7f-5p overexpression. These lipids were enriched in pathways related to phosphatidylcholines, monounsaturated fatty acids, and C16-C18 fatty acid metabolism. Exogenous palmitic acid (C16:0) treatment reversed the inhibitory effects of let-7f-5p on SREBP2 expression and viral replication, demonstrating that viral proliferation can be regulated by modulating host lipid metabolism. This study reveals that PRRSV hijacks host lipid metabolism to facilitate viral replication, whereas let-7f-5p exerts antiviral effects through dual mechanisms. These findings provide new insights into host-directed antiviral strategies against PRRSV infection. Full article

Despite the nutritional importance of sweetpotato, systematic studies on its lipid metabolism remain largely unexplored. To address this gap, this study investigates the dynamic changes in lipid composition during the development of sweetpotato storage roots using a comprehensive lipidomics approach. Through LC-ESI-MS/MS analysis of ‘Guangshu 79’ (G79), an orange-fleshed sweetpotato cultivar, across five developmental stages (S1–S5), 612 lipid species were identified, spanning five major classes: glycerolipids (GL, 57.6%), glycerophospholipids (GP, 24.6%), sphingolipids (SP, 13.9%), fatty acids (FA, 3.6%), and prenol lipids (PR, 0.3%). Early developmental phases (S1–S2) were characterized by upregulation of structural phospholipids (PC, PE) and energy-storage triglycerides (TG), supporting active membrane biogenesis and carbon allocation. Mid-development (S3) showed peak TG accumulation (1439.30 nmol/g), while later stages (S4–S5) exhibited sphingolipid-mediated signaling (Cer, HexCer) and membrane stabilization through glycolipids (MGDG, DGDG). KEGG pathway analysis revealed glycerophospholipid metabolism (25.8%) and sphingolipid metabolism (19.3%) as dominant pathways. These findings systematically characterize the lipid composition and dynamic changes during sweetpotato storage root development, providing a valuable resource for future research on lipid metabolism in root crops. Full article

Recurrent Clostridioides difficile infection (rCDI) remains a major therapeutic challenge. Although faecal microbiota transplantation (FMT) is highly effective and thought to restore microbial composition and metabolic function, the mechanisms underlying its success are not fully understood. In particular, the contribution of non-bacterial components such as soluble metabolites remains unclear. Therefore, further investigation is needed to identify the mechanistic drivers of FMT efficacy and clarify how non-bacterial factors contribute to therapeutic outcomes. Here, we applied untargeted three-dimensional Orbitrap secondary ion mass spectrometry (3D OrbiSIMS) to profile faecal metabolic reprogramming in rCDI patients pre- and post-FMT, alongside C. difficile cultures exposed to sterile faecal filtrates. FMT induced extensive metabolic shifts, restoring glyoxylate/dicarboxylate and glycerophosphoinositol pathways and normalising disrupted bile acid and amino acid profiles. Faecal filtrate exposure caused strain-specific metabolic disruption in C. difficile, depleting proline, fumarate and succinate while enriching tryptophan. While multiple metabolite classes were profiled, the most significant functional changes were observed in lipids. Lipidomics identified >3.8-fold enrichment of phosphatidylinositol (PI) species, which localised to bacterial membranes and conferred cytoprotection against C. difficile toxins and other epithelial insults. Spatial metabolomics imaging revealed, for the first time, metabolite compartmentalisation within C. difficile, with proline and succinate broadly distributed across the cell surface and fumarate confined to distinct microdomains, highlighting functional heterogeneity in pathogen metabolism. Collectively, these findings demonstrate that soluble metabolites within faecal filtrates mediate pathogen suppression and epithelial barrier protection, establishing metabolite-driven mechanisms underlying FMT efficacy and identifying PI lipids as candidate post-biotic therapeutics for rCDI. Full article

Background: Doxorubicin (DOX) is a highly effective chemotherapy drug, but its use is limited by dose-dependent cardiotoxicity, driving the search for protective natural products. Although the herb Viscum coloratum (Kom.) Nakai is known for its cardiovascular benefits, the cardioprotective effects and mechanisms of its isolated compound, DHDK, remain unexplored. Methods: The protective effect of DHDK was first evaluated in DOX-injured H9c2 cardiomyocytes. Subsequently, an integrated network toxicology (incorporating DOX-induced toxicity targets and relevant chronic disease pathways such as aging and lipid metabolism) and pharmacology (DHDK) approach identified core targets, which were then refined through Protein–Protein Interaction (PPI) analysis and molecular docking. The underlying mechanism was investigated using lipidomics and validated through a series of in vitro assays, including CCK-8, q-PCR, biochemical tests, and flow cytometry, as well as in an in vivo rat model. Results: DHDK significantly alleviated DOX-induced cardiomyocyte toxicity. Integrated analysis identified 56 intersecting targets, with PPARG confirmed as the primary target via PPI and molecular docking. Lipidomics revealed that DHDK potently attenuated DOX-induced accumulation of pathogenic lipids (e.g., fatty acids, ceramides). Mechanistically, DHDK activated PPARG, which in turn upregulated CPT1B, a key regulator of fatty acid β-oxidation (FAO). This enhanced cell viability, ATP production, and mitochondrial membrane potential while reducing oxidative stress. These protective effects, which were abolished by the inhibition of PPARG or CPT1B, were further validated in vivo. Conclusion: This study demonstrates that DHDK exerts its cardioprotective effect by activating the PPARG-CPT1B-FAO axis, effectively correcting lipid metabolic disorders. Given that lipid dysregulation is a hallmark of various internal metabolic diseases, DHDK may also hold therapeutic potential for other heart conditions driven by metabolic disturbances, such as diabetic cardiomyopathy, highlighting its broad relevance to the field of internal diseases. Full article