Search Results (43)

Wasted ice cream products contain many valuable food components, most notably butterfat, which has potential for recovery. Disk bowl centrifugation, widely used in milk processing, has not been previously used with ice cream. In comparison to milk, ice cream has larger variations in fat content, smaller fat globule sizes, and the presence of additives and emulsifiers. An Armfield FT15 lab-scale disk bowl centrifuge was used to separate samples of five ice creams containing 1.25 kg melted ice cream each at temperatures ranging from 30 °C to 80 °C, while incorporating enzymatic digestion from four enzymes to encourage fat separation. Results showed that fat capture from ice cream is aided by enzymatic digestion. Rennet was the most effective enzyme tested. Although some varieties performed better without processing compared to 1 h incubation, all ice creams benefitted from processing after 4 h of incubation, with at least 40% fat (weight basis) and high total recovery. Optimal conditions were found with a 4 h rennet incubation, with four of five ice cream varieties showing greater than 90% fat recovery and a fat concentration of 37% wet basis or higher. Full article

This in vitro study evaluated and compared the surface roughness, color stability, and gloss of two single-shade composite resins after simulated toothbrushing, and investigated the correlations among these parameters. Twenty disk-shaped specimens (n = 10 per group) were prepared from two single-shade composite resins (Material A and Group B) and subjected to simulated toothbrushing up to 15,000 cycles. Surface roughness (Ra) was measured at baseline and after 5000, 10,000, and 15,000 cycles. Color parameters (CIE Lab*) and gloss (60°) were measured at baseline and after 15,000 cycles. Color change was calculated using the CIEDE2000 formula (ΔE₀₀). Data were analyzed using two-way mixed ANOVA, t-tests, and Pearson correlation analysis (α = 0.05). Both materials showed progressive increases in surface roughness. Material B exhibited significantly higher Ra values than Material A from 10,000 cycles onward (p < 0.01). After 15,000 cycles, Material B demonstrated significantly greater color change (ΔE₀₀: 2.21 ± 0.18 vs. 1.48 ± 0.13; p < 0.001), exceeding the acceptability threshold (ΔE₀₀ = 1.8), while Material A remained clinically acceptable. Material B also showed greater gloss reduction (60% vs. 35%; p < 0.001). Strong correlations were found between surface roughness and both gloss change (r = −0.919) and color change (r = 0.826). Material A demonstrated greater resistance to surface degradation and better preservation of optical properties compared to Material B. Surface roughness was identified as the common underlying factor driving both color instability and gloss reduction in single-shade composites. Clinical Significance: Not all single-shade composites perform equally under mechanical aging. Clinicians should consider the filler technology and long-term surface stability when selecting single-shade composite resins for clinical use. Full article

The long-term esthetic performance of indirect restorations is closely related to the color stability and surface integrity of the restorative materials used. With the increasing use of CAD/CAM technologies, a wide range of ceramic- and resin-based materials have been developed for indirect restorative applications. These include feldspathic ceramics (VITA Mark II, VITA Zahnfabrik), hybrid ceramics (VITA Enamic, VITA Zahnfabrik), resin nanoceramic CAD/CAM blocks (Lava Ultimate, 3M), and indirect microhybrid resin composites (GC Posterior, GC Corporation). However, these materials are continuously exposed to chemical and mechanical challenges in the oral environment, such as staining from beverages and daily toothbrushing, which may compromise their optical and surface properties over time. The purpose of this in vitro study was to evaluate and compare the color change (ΔE) and surface roughness (Ra) of these materials after repeated coffee immersion and simulated toothbrushing. A total of 240 disk-shaped specimens were fabricated and subjected to three aging cycles consisting of storage in coffee or distilled water, followed by simulated toothbrushing with or without toothpaste. The color parameters were measured using a spectrophotometer according to the CIE Lab* system, surface roughness was assessed using a contact profilometer, and surface topography was qualitatively analyzed by atomic force microscopy. The results demonstrated that coffee immersion significantly increased both color change and surface roughness for all tested materials, with more pronounced effects observed in resin-based materials. Ceramic-based CAD/CAM materials (VITA Mark II and VITA Enamic) showed greater resistance to discoloration and surface degradation, whereas the resin nanoceramic material (Lava Ultimate) and the microhybrid resin composite (GC Posterior) exhibited clinically perceptible color changes and higher roughness values, particularly after toothbrushing with toothpaste. Full article

This study reports the isolation, identification, and functional characterization of lactic acid bacteria (LAB) obtained from the endogenous fermentation of Theobroma bicolor (pataxte), an understudied Mesoamerican species with unexplored biotechnological potential. Five lactic acid bacteria strains were isolated and selected for comprehensive in vitro evaluation of their probiotic attributes. The assays included antimicrobial activity (disk diffusion and minimum inhibitory concentration), tolerance to simulated gastrointestinal conditions, and comparison of survival between non-encapsulated and bigel-encapsulated cells during digestion. All five isolates demonstrated notable antimicrobial activity against Escherichia coli ATCC 25922, Salmonella Enteritidis ATCC 13076, and Staphylococcus aureus ATCC 25923. Strain S1.B exhibited exceptional resistance to acidic pH (2.0) and bile salts, reaching 3.61 ± 0.00 log (CFU/mL) after gastrointestinal simulation. The strain was identified as Lactiplantibacillus pentosus via 16S rRNA gene sequencing, marking the first documented isolation of this species from pataxte fermentation. Bigel encapsulation markedly enhanced its survival, increasing viability to 5.08 ± 0.10 log (CFU/mL). These findings identify Lactiplantibacillus pentosus 124-2 as a potential probiotic candidate originating from pataxte fermentation and highlight bigel systems as powerful vehicles for bacterial protection. Collectively, this work expands the microbial biodiversity known in Theobroma fermentations and underscores their promise for future functional food applications. Full article

Background/objectives: One of the most crucial responsibilities of clinical microbiology laboratories involves conducting precise and fast antimicrobial susceptibility testing (AST) on bacterial isolates, necessary to guide antibiotic therapy. Standardized disk diffusion, a manual AST method, consumes a significant amount of time and is error-prone. Total laboratory automation in microbiology should enable a lower workload, high traceability, and standardization in AST. Therefore, we examined the concordance at the categorical level between the manual reference method and a new automated approach for bacterial suspension preparation and plate streaking in AST. Methods: In this study, we validated the automated bacterial suspension preparation by Colibri^® and plate streaking by WASP^® for antibiotic disk diffusion susceptibility testing. Two hundred and one non-duplicate bacterial strains, derived from a variety of different bacterial species, encompassing key known resistance mechanisms and comprising both Gram-positive (N = 78) and Gram-negative (N = 123) strains, were tested. Both the manual (reference) and the automated (Colibri^® with WASP^®) method for AST preparation and plate streaking used the Radian^® in-line carousel and expert system for antibiotic susceptibility interpretation. European Committee on Antimicrobial Susceptibility Testing clinical breakpoints (version 13.1) were used to interpret susceptibility results. Results: The overall categorical agreement between the two compared methods was 96.3% (2186/2269). We identified 2.7% (62/2269) minor errors, 1.6% (17/1047) major errors, and 0.4% (4/1121) very major errors. However, it is noteworthy that after retesting the discrepant results, the major errors were reduced to 0.4% and the very major errors were reduced to 0%. Conclusions: The combination of Colibri^® and WASP^® appears to be a compelling automated tool for the automated preparation of bacterial suspensions and plate streaking in AST, with an accuracy that is equal to the reference method. Furthermore, it enables the optimization of hands-on time and standardization of (pre-) analytical procedures. Full article

Soil-transmitted helminths (STHs) present a significant global health challenge, particularly in tropical and subtropical regions. The current diagnostic standard involves the microscopic examination of a stool smear but it lacks sensitivity to detect infections of low intensity. Innovative solutions like lab-on-a-disk (LoD) technologies are emerging, showing promise in detecting low-intensity infections. Field tests conducted using our SIMPAQ (single-image parasite quantification) LoD device have demonstrated its potential as a diagnostic tool, especially for such low-intensity infections. Nevertheless, the device’s efficiency has been limited by significant egg loss during sample preparation, low capture efficiency of eggs within the Field of View (FOV), and the presence of larger fecal debris that obstructs effective egg trapping and imaging. In this study, we conducted a set of laboratory experiments using model polystyrene particles and purified STH eggs to improve the sample preparation protocol. These experiments include the entire SIMPAQ procedure starting from sample preparation, infusing it into the LoD device, centrifugation, delivering the (model) eggs to the FOV, capturing an image, and analyzing it. We analyzed egg losses at each step of the procedure following the “standard” protocol, then elaborated and tested alternative, more efficient procedures. The resulting modified protocol significantly minimized particle and egg loss and reduced the amount of debris in the disk, thus enabling effective egg capture and clear images in the FOV, increasing the reliability of the diagnostic results. Full article

Introduction: Bioinformatics is a relatively recent multidisciplinary research field continuously offering novel opportunities. Although many researchers are actively working in/with bioinformatics, some research centers still face difficulties in hiring bioinformaticians and establishing the appropriate (first) bioinformatics infrastructures and computational resources. In our research center, we started from scratch and established initial bioinformatics infrastructures for common use and also for the specific case of precision/personalized medicine. Case description: Here, we report a case study reflecting our specific needs and circumstances during the implementation of a novel bioinformatics laboratory. This involved the preparation of rooms, computer networks, computational resources novel designs, and upgrades to existing designs. Moreover, this work involved people from diverse areas and institutions, such as companies, institutional projects, informatics, and technical infrastructures services. Discussion and evaluation: The work resulted in the implementation of four novel designs dedicated to genomic medicine and in the adaptation of two existing designs dedicated to common use located in the dry-lab room. This is not an accurate and objective work, as it often depends on the available computer hardware and the target bioinformatics field(s). The four novel designs offered substantial improvements when compared to the upgraded designs, additionally corroborated by performance evaluations, which resulted in an overall highest performance of the novel designs. Conclusions: We present work that was developed over two years until completion with functioning infrastructure. This project enabled us to learn many novel aspects not only related to redundant disk technologies, but also related to computer networks, hardware, storage-management operating systems, file systems, performance evaluation, and also in the management of services. Moreover, additional equipment will be important to maintain and expand the potential and reliability of the bioinformatics laboratory. We hope that this work can be helpful for other researchers seeking to design their bioinformatics equipment or laboratories. Full article

Raw milk and traditional fermented foods such as artisanal cheese represent a natural source of lactic acid bacteria (LAB). They can produce antimicrobial compounds, such as bacteriocins and lactic acid, which may be exploited in dairy biopreservation. This study aimed to conduct a systematic review and meta-analysis to synthesize the inhibition diameter (ID) of LAB against L. monocytogenes, S. aureus, and Salmonella spp. Literature electronic searches were performed on PubMed, Scopus, and Web of Science, to identify articles that reported data on in-vitro antimicrobial activity by LAB isolated from dairy foods. A total of 1665 papers were retrieved, and 20 primary studies were selected according to the selection criteria, of which 397 observations were extracted. Random-effects meta-regression models were employed to describe the effects of LAB genus, pathogen concentration, susceptibility method, incubation time, inoculation volume, agar type and pH on the IDs for L. monocytogens, S. aureus, and Salmonella spp. L. monocytogens was the most susceptible pathogen (p < 0.05) to the LAB effects, followed by S. aureus and Salmonella spp. As a whole, LAB from the Lacticaseibacillus genus were the most effective (p < 0.05) in inhibiting L. monocytogens (21.49 ± 2.654 mm), followed by S. aureus (21.06 ± 2.056 mm). Salmonella spp. presented higher (p < 0.05) susceptibility to Lactobacillus genus (19.93 ± 2.456 mm). From the results, a general trend could be observed for the well-diffusion method to produce higher (p < 0.05) ID estimates than the spot and disk methods (30.73 ± 2.530 mm vs. 21.98 ± 1.309 mm vs. 13.39 ± 1.403 mm for L. monocytogenes; 22.37 ± 1.073 mm vs. 14.91 ± 2.312 mm vs. 20.30 ± 2.319 mm for Salmonella spp.), respectively. Among the tested moderators, the pathogen’s inoculum concentration, the in vitro susceptibility assay itself, incubation time and inoculation volume on agar are determinant parameters to be looked at when designing a robust and reproducible experimental plan. The in vitro results reinforced that LAB can be useful in controlling the development of pathogenic bacteria frequently found in the dairy industry. Full article

The need for rapid, on-site contaminant detection is becoming increasingly vital for tackling environmental and public health challenges. This study introduces an efficient method for detecting sulfamethoxazole (SMX), a widely used antibiotic with significant environmental implications. A cost-effective, scalable approach was developed using lab-on-paper devices integrated with molecularly imprinted polymers (MIPs), synthesized through an in situ photopolymerization process that was completed in just 10 min. Using only 2 mL of MIP solution enabled the efficient mass production of 100 disks. Traditional template extraction, which often takes hours or days, was reduced to just 10 min using a multichannel micropipette and absorbent fabric. The MIP-PAD achieved a limit of detection (LOD) of 0.8 µg/mL and a limit of quantification (LOQ) of 2.4 µg/mL, with measurements obtained using a smartphone-based colorimetric detection system. It exhibited excellent repeatability, with a relative standard deviation (RSD) of 3.26% across seven tests, high reusability for up to eight cycles, and recovery rates for real samples ranging from 81.24% to 99.09%. This method provides notable improvements in sensitivity, reproducibility, and environmental sustainability over conventional techniques. The user-friendly platform integrating smartphone-based colorimetric detection is highly practical for real-time applications, offering broad potential for environmental monitoring, food safety, and healthcare. Full article

A comprehensive analysis of in vitro pumps used in cardiovascular research is provided in this review, with a focus on the characteristics of generated flows and principles of flow generations. The cardiovascular system, vital for nutrient circulation and waste removal, generates complex hemodynamics critical for endothelial cell function. Cardiovascular diseases (CVDs) could be caused by the disturbances in these flows, including aneurysms, atherosclerosis, and heart defects. In vitro systems simulate hemodynamic conditions on cultured cells in the laboratory to study and evaluate these diseases to advance therapies. Pumps used in these systems can be classified into contact and non-contact types. Contact pumps, such as piston and gear pumps, can generate higher flow rates, but they have a higher risk of contamination due to the direct interaction of pump with the fluid. Non-contact pumps, such as peristaltic and lab-on-disk centrifugal pumps, minimize contamination risks, but they are limited to lower flow rates. Advanced pumps including piezoelectric and I-Cor diagonal pumps are focused on improving the accuracy of flow replication and long-term stability. The operational principles, advantages, and some disadvantages of these pump categories are evaluated in this review, while providing insights for optimizing in vitro cardiovascular models and advancing therapeutic strategies against CVDs. The outcomes of the review elaborate the importance of selecting an appropriate pump system, to accurately replicate cardiovascular flow patterns. Full article

Due to the extremely low Reynolds number, the mixing of substances in laminar flow within microfluidic channels primarily relies on slow intermolecular diffusion, whereas various rapid reaction and detection requirements in lab-on-a-chip applications often necessitate the efficient mixing of fluids within short distances. This paper presents a magnetic pillar-shaped particle fabrication device capable of producing particles with planar shapes, which are then utilized to achieve the rapid mixing of multiple fluids within microchannels. During the particle fabrication process, a degassed PDMS chip provides self-priming capabilities, drawing in a UV-curable adhesive-containing magnetic powder and distributing it into distinct microwell structures. Subsequently, an external magnetic field is applied, and the chip is exposed to UV light, enabling the mass production of particles with specific magnetic properties through photo-curing. Without the need for external pumping, this chip-based device can fabricate hundreds of magnetic particles in less than 10 min. In contrast to most particle fabrication methods, the degassed PDMS approach enables self-priming and precise dispensing, allowing for precise control over particle shape and size. The fabricated dual-layer magnetic particles, featuring fan-shaped blades and disk-like structures, are placed within micromixing channels. By manipulating the magnetic field, the particles are driven into motion, altering the flow patterns to achieve fluid mixing. Under conditions where the Reynolds number in the chip ranges from 0.1 to 0.9, the mixing index for substances in aqueous solutions exceeds 0.9. In addition, experimental analyses of mixing efficiency for fluids with different viscosities, including 25 wt% and 50 wt% glycerol, reveal mixing indices exceeding 0.85, demonstrating the broad applicability of micromixers based on the rapid rotation of magnetic particles. Full article

This systematic review and meta-analysis compile the in vitro antimicrobial efficacy of lactic acid bacteria (LAB) supernatants against three common pathogenic bacteria found in dairy products: Salmonella spp., L. monocytogenes, and Staphylococcus aureus. After screening and analysis of full papers, identified by searches in PubMed, Scopus, and Web of Science databases, thirty-nine studies were regarded as relevant, and a total of 510 observations were recorded. The effects of moderators on inhibition diameters were assessed by adjusting three pathogen-specific meta-regression models. Results showed that, in general terms, strains from the Enterococcus genus displayed the highest inhibition values against L. monocytogenes (15.90 ± 2.138 mm), whereas Lacticaseibacillus strains were more effective against S. aureus (11.89 ± 0.573 mm). The well diffusion test outperformed the spot and disk diffusion tests, and more acidic LAB supernatants resulted in higher measurements of inhibition diameters (p < 0.001). Meta-regression models incorporating LAB genus, pathogen concentration, and incubation time explained 33.8%, 52.3%, and 19.8% of the total variance in inhibition diameters for L. monocytogenes, Salmonella spp., and S. aureus, respectively. None of the three models showed evidence of publication bias. This meta-regression study demonstrated that LAB strains present in dairy products possess a variable capacity to inhibit any of the three foodborne pathogens. Overall, L. monocytogenes was found to exhibit greater susceptibility than Salmonella spp. and S. aureus; thus, the antilisterial capacity of the selected LAB strains could be exploited in developing biocontrol strategies for cheese-making. Full article

Objective: The purpose of this study is to analyze and compare the colors (A2, A3 and A3.5) of polymerized resin-based composites (RBCs) with respect to the shade numbers within each product line and the VITAPAN Classical^® shade guide they purported to represent. Methods: Three A-shades (A2, A3 and A3.5) from four RBC products (Harmonize^®, Empress^® Direct^®, Grandio^® and Filtek^® 500) were compared within the VITAPAN Classical^® shade guide and within their own commercial shade guide. Nine disk-shaped specimens, 6 mm in diameter and 2 mm thick, were prepared for each RBC color (three of each color). The color measurements were made according to the CIE L*a*b* color scale (quantifying L*c*h*a*b* values) using a Vita Easyshade Compact IV^® digital spectrophotometer. We calculated the CIEDE2000 color differences between polymerized composites and shade guides, as well as between composites. The values obtained from composites and samples of the color guides in the CIE L*a*b* space were represented by ICC3D software (Version 1.2.9) Results: The ANOVA test verified the existence of statistically significant differences between composites for the same shades (p < 0.05) except for shade A2. CIEDE2000 color differences between composites and the VITAPAN Classical^® shade guide ranged from 3.5 to 13.1 depending on the composite and the shade. Conclusions: There were color differences among the polymerized resin-based composites, between these and their own shade guides/manufacturer’s commercial guides, and between the former and the corresponding samples of the VITAPAN Classical^® shade guide. Clinical significance: Color selection when performing an aesthetic dental restoration is essential for the clinician and the patient to obtain an optimal result. Taking into account the color difference (∆E₀₀) for each composite with the VITAPAN Classical^® shade guide or with the manufacturers’ commercial guide allows for more precision with shade selection in aesthetic dentistry. Full article

An estimated 1.5 billion people are infected with soil-transmitted helminths (hookworms, Ascaris lumbricoides and Trichuris trichiura). These infections are targeted for elimination by the World Health Organization (WHO) by 2030, with the main interventions being mass drug administration using albendazole or mebendazole. Tanzania is one of the endemic countries; it has been implementing MDA to school-aged children for more than a decade and the infection prevalence and intensity of infection have declined. Thus, at this point, the monitoring and evaluation of infection prevalence and intensity of infections, and assessing drug efficacy is crucial and requires accurate diagnostic tests. The currently used standard diagnostic test, the Kato–Katz (KK) technique, has several limitations and the WHO is calling for the development and evaluation of new diagnostic tests. The Lab-on-a-disk (LOD) was developed and tested in the endemic areas of north-western Tanzania to evaluate its sensitivity and specificity using KK and the formol-ether concentration technique. The results showed that when using a duplicate KK slide, the LOD had a sensitivity and specificity of 37.2% (95% CI: 30.7–43.9) and 67.3% (95% CI: 63.1–71.3%). Using four KK slides as a standard technique, the overall sensitivity and specificity were 37.7% (95% CI: 33.1–42.6) and 70.7% (95% CI: 65.5–75.6). The LOD attained high specificity but low sensitivity especially in detecting eggs of Trichuris trichiura. The LOD technique has potential as a promising diagnostic test, but its sensitivity still requires improvement. Full article

The recently proposed single-image parasite quantification (SIMPAQ) platform based on a Lab-on-a-Disc (LOD) device was previously successfully tested in field conditions, demonstrating its efficiency in soil-transmitted helminth (STH) egg detection and analysis on the level delivered by the current state-of-the-art methods. Furthermore, the SIMPAQ provides relatively quick diagnostics and requires small amounts of sample and materials. On the other hand, in a recent related study, it was revealed that the performance of the SIMPAQ method can be limited due to the action of the tangential Euler and Coriolis forces, and the interaction of the moving eggs with the walls of the LOD chamber. Here, we propose a new improved design that allows us to overcome these limitations and enhance the yield of the SIMPAQ LOD device, as demonstrated in experiments with a synthetic particle model system and real parasite eggs. Despite the simplicity, the proposed design modification is demonstrated to allow a substantial improvement in the yield of the SIMPAQ device, i.e., above 90% of parasite eggs and 98% of synthetic model particles were transported to the field of view. The new design proposed here will be further examined in the new generation of SIMPAQ devices within ongoing research on STH egg detection in field conditions. Full article