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Search Results (128)

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Keywords = human-modified landscape

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33 pages, 2141 KB  
Review
From Elixirs to Geroscience: A Historical and Molecular Perspective on Anti-Aging Medicine
by Giuseppe Rosario Pietro Nicoletti, Katia Mangano, Ferdinando Nicoletti and Eugenio Cavalli
Molecules 2025, 30(24), 4728; https://doi.org/10.3390/molecules30244728 - 10 Dec 2025
Viewed by 935
Abstract
The pursuit of youth and longevity has accompanied human societies for millennia, evolving from mythological and esoteric traditions toward a scientific understanding of aging. Early concepts such as Greek ambrosia, Taoist elixirs, and medieval “aqua vitae” reflected symbolic or spiritual interpretations. A major [...] Read more.
The pursuit of youth and longevity has accompanied human societies for millennia, evolving from mythological and esoteric traditions toward a scientific understanding of aging. Early concepts such as Greek ambrosia, Taoist elixirs, and medieval “aqua vitae” reflected symbolic or spiritual interpretations. A major conceptual transition occurred between the late nineteenth and early twentieth centuries, when aging began to be framed as a biological process. Pioneering ideas by Metchnikoff, together with early and sometimes controversial attempts such as Voronoff’s grafting experiments, marked the first efforts to rationalize aging scientifically. In the mid-twentieth century, discoveries including the Hayflick limit, telomere biology, oxidative stress, and mitochondrial dysfunction established gerontology as an experimental discipline. Contemporary geroscience integrates these insights into a coherent framework linking cellular pathways to chronic disease risk. Central roles are played by nutrient-sensing networks such as mTOR, AMPK, and sirtuins, together with mitochondrial regulation, proteostasis, and cellular senescence. Interventions, including caloric restriction, fasting-mimicking diets, rapalogues, sirtuin activators, metformin, NAD+ boosters, senolytics, and antioxidant combinations such as GlyNAC, show consistent benefits across multiple model organisms, with early human trials reporting improvements in immune function, mitochondrial activity, and biomarkers of aging. Recent advances extend to epigenetic clocks, multi-omic profiling, gender-specific responses, and emerging regenerative and gene-based approaches. Overall, the evolution from historical elixirs to molecular geroscience highlights a shift toward targeting aging itself as a modifiable biological process and outlines a growing translational landscape aimed at extending healthspan and reducing age-related morbidity. Full article
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38 pages, 9818 KB  
Review
The Pampas Fox (Lycalopex gymnocercus, ‘Zorro Gris Pampeano’): An Integrative Review of the Ecological, Health, and Conflict Roles of a Key Mesopredator in Southern South America
by Bernabé Vidal, Lorenzo Verger and Gustavo J. Nagy
Wild 2025, 2(4), 49; https://doi.org/10.3390/wild2040049 - 9 Dec 2025
Viewed by 252
Abstract
The Pampas fox (Lycalopex gymnocercus) is a widespread meso-predator in Southern South America, present in grasslands, agroecosystems, and human-modified landscapes. Although numerous studies have examined its diet, parasites, distribution, and behaviour, knowledge remains fragmented without an integrative synthesis. This review compiles [...] Read more.
The Pampas fox (Lycalopex gymnocercus) is a widespread meso-predator in Southern South America, present in grasslands, agroecosystems, and human-modified landscapes. Although numerous studies have examined its diet, parasites, distribution, and behaviour, knowledge remains fragmented without an integrative synthesis. This review compiles over 150 documents from Argentina, Uruguay, Brazil, Paraguay, and Bolivia to unify dispersed information. Key findings highlight unresolved taxonomy, population structure, and biogeography (based on genetic, morphological, and phylogeographic data), the species’ ecological roles as a meso-predator, seed disperser, and scavenger, and major threats (including road mortality, hunting, persecution, and interactions with domestic dogs). The Pampas fox also harbours pathogens—including zoonotic agents and those threatening livestock and pets—and is frequently stigmatised as a pest, persecuted without substantiated evidence. By integrating ecological, health, and conflict perspectives, this review provides a regional baseline, reframing its importance and guiding more effective management. Full article
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8 pages, 2454 KB  
Proceeding Paper
Monitoring and Assessment of Hydromorphological Characteristics of the Bílovka Stream in the Moravian-Silesian Region Using the HEM 2014 Methodology
by Michal Adamec, Tomáš Dvorský, Vojtěch Václavík and Kateřina Jurajdová Šťastná
Eng. Proc. 2025, 116(1), 31; https://doi.org/10.3390/engproc2025116031 - 4 Dec 2025
Viewed by 143
Abstract
This study aims to provide a comprehensive assessment of the ecological status of two distinct sections of the Bílovka stream located in the Moravian-Silesian Region of the Czech Republic. The evaluation was conducted using the standardized HEM 2014 methodology, which assesses seventeen hydromorphological [...] Read more.
This study aims to provide a comprehensive assessment of the ecological status of two distinct sections of the Bílovka stream located in the Moravian-Silesian Region of the Czech Republic. The evaluation was conducted using the standardized HEM 2014 methodology, which assesses seventeen hydromorphological indicators across three spatial zones: the channel, the bank/riparian zone, and the floodplain. A comparative analysis between a near-natural reach and a section significantly modified by human activities revealed notable differences in ecological quality. The findings underscore the practical relevance of the HEM 2014 methodology for evaluating the current hydromorphological condition of watercourses and for informing the design of targeted restoration measures, particularly within urbanized landscapes. Full article
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39 pages, 9235 KB  
Article
Biological Performance and Molecular Mechanisms of Mesyl MicroRNA-Targeted Oligonucleotides in Colorectal Cancer Cells
by Svetlana K. Miroshnichenko, Olga A. Patutina, Andrey V. Markov, Maxim S. Kupryushkin, Valentin V. Vlassov and Marina A. Zenkova
Int. J. Mol. Sci. 2025, 26(23), 11747; https://doi.org/10.3390/ijms262311747 - 4 Dec 2025
Viewed by 281
Abstract
Colorectal cancer (CRC) remains one of the most aggressive and therapeutically resistant malignancies worldwide. This study examined the molecular mechanisms underlying the anti-oncogenic activity of methanesulfonyl phosphoramidate-modified antisense oligonucleotides (µ-ASOs) targeting miR-21, miR-17, and miR-155, which represent critical oncogenic drivers in CRC. Using [...] Read more.
Colorectal cancer (CRC) remains one of the most aggressive and therapeutically resistant malignancies worldwide. This study examined the molecular mechanisms underlying the anti-oncogenic activity of methanesulfonyl phosphoramidate-modified antisense oligonucleotides (µ-ASOs) targeting miR-21, miR-17, and miR-155, which represent critical oncogenic drivers in CRC. Using human colorectal adenocarcinoma Caco-2 cells transfected with either individual µ-ASOs or their triple combination, we assessed target miRNA downregulation, antiproliferative and anti-migratory activities, and performed extensive proteomic profiling. Protein–protein interaction network analysis of differentially expressed proteins (DEPs) revealed that, beyond modulation of core metabolic processes, each µ-ASO exhibited distinct effects: µ-21 predominantly affected apoptosis, cell cycle, and DNA repair; µ-17 influenced proliferation and chaperone responses; and µ-155 modulated intracellular transport and immune regulation. Combination treatment elicited a unique proteomic signature partially overlapping with monotherapies. The proteomic analysis revealed several validated and putative miRNA-targeted DEPs, including both established and novel candidates in the CRC context: RPL31, CCT2, and CDC37 (miR-21); DNM2, SNRPN, NUP98, and NUP85 (miR-17); as well as RPL17 (miR-155). Expression of these targets correlated with favorable clinical outcomes in CRC patients. This work provides the first comprehensive mechanistic insight into antisense oligonucleotide-mediated miRNA suppression in Caco-2 colorectal adenocarcinoma cells and expands the miRNA target landscape. Full article
(This article belongs to the Special Issue New Molecular Aspects of Colorectal Cancer)
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25 pages, 19784 KB  
Article
Spatiotemporal Dynamics of Anthropogenic Night Light in China
by Christopher Small
Lights 2025, 1(1), 4; https://doi.org/10.3390/lights1010004 - 21 Nov 2025
Viewed by 258
Abstract
Anthropogenic night light (ANL) provides a unique observable for the spatially explicit mapping of human-modified landscapes in the form of lighted infrastructure. Since 2013, the Visible Infrared Imaging Radiometer Suite (VIIRS) Day Night Band (DNB) on the Suomi NPP satellite has provided more [...] Read more.
Anthropogenic night light (ANL) provides a unique observable for the spatially explicit mapping of human-modified landscapes in the form of lighted infrastructure. Since 2013, the Visible Infrared Imaging Radiometer Suite (VIIRS) Day Night Band (DNB) on the Suomi NPP satellite has provided more than a decade of near-daily observations of anthropogenic night light. The objective of this study is to quantify changes in ANL in developed eastern China post-2013 using VIIRS DNB monthly mean brightness composites. Specifically, to constrain sub-annual and interannual changes in night light brightness to distinguish between apparent and actual change of ANL sources, and then conduct a spatiotemporal analysis of observed changes to identify areas of human activity, urban development and rural electrification. This analysis is based on a combination of time-sequential bitemporal brightness distributions and quantification of the spatiotemporal evolution of night light using Empirical Orthogonal Function (EOF) analysis. Bitemporal brightness distributions show that bright (>~1 nW/cm2/sr) ANL is heteroskedastic, with temporal variability diminishing with increasing brightness. Hence, brighter lights are more temporally stable. In contrast, dimmer (<~1 nW/cm2/sr) ANL is much more variable on monthly time scales. The same patterns of heteroskedasticity and variability of the lower tail of the brightness distribution are observed in year-to-year distributions. However, year-to-year brightness increases vary somewhat among different years. While bivariate distributions quantify aggregate changes on both subannual and interannual time scales, spatiotemporal analysis quantifies spatial variations in the year-to-year temporal evolution of ANL. The spatial distribution of brightening (and, much less commonly, dimming) revealed by the EOF analysis indicates that most of the brightening since 2013 has occurred at the peripheries of large cities and throughout the networks of smaller settlements on the North China Plain, the Yangtze River Valley, and the Sichuan Basin. A particularly unusual pattern of sequential brightening and dimming is observed on the Loess Plateau north of Xi’an, where extensive terrace construction has occurred. All aspects of this analysis highlight the difference between apparent and actual changes in night light sources. This is important because many users of VIIRS night light attribute all observed changes in imaged night light to actual changes in anthropogenic light sources—without consideration of low luminance variability related to the imaging process itself. Full article
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12 pages, 1068 KB  
Article
Year-Round Activity Patterns of Badgers (Meles meles) and Mesocarnivore Communities in Urban and Sub-Urban Areas
by Francesco Bisi, Pietro Grespan, Claudia Tranquillo, Adriano Martinoli, Lucas Armand Wauters and Damiano Giovanni Preatoni
Urban Sci. 2025, 9(11), 453; https://doi.org/10.3390/urbansci9110453 - 1 Nov 2025
Cited by 1 | Viewed by 485
Abstract
Urbanisation exerts profound effects on biodiversity, driving species extinctions while promoting behavioural adaptations in generalist taxa. The European badger (Meles meles) exemplifies such adaptability, exploiting anthropogenic resources and modifying activity rhythms. This study assessed badger activity within the Varese province in [...] Read more.
Urbanisation exerts profound effects on biodiversity, driving species extinctions while promoting behavioural adaptations in generalist taxa. The European badger (Meles meles) exemplifies such adaptability, exploiting anthropogenic resources and modifying activity rhythms. This study assessed badger activity within the Varese province in northern Italy, comparing an urban park and a sub-urban landscape. From August 2023 to August 2024, camera traps recorded badgers and sympatric mesocarnivores, including red foxes (Vulpes vulpes), domestic cats (Felis catus), and beech martens (Martes foina). Despite high activity overlap between sites (∆ = 0.87), the Mardia–Watson–Wheeler test revealed significant differences. Urban badgers displayed heightened nocturnality relative to sub-urban individuals, consistent with comparisons to nearby protected natural areas. This pattern indicates anthropogenic disturbance as a driver of temporal adjustment. Urban badgers are active from 18:00 to 07:00, whereas sub-urban badgers are active from 17:00 to 08:00. The later onset and earlier termination of urban activity suggest behavioural avoidance of human presence. Red foxes exhibited even greater nocturnality in urban settings, while domestic cats were primarily crepuscular and less frequently detected, particularly in sub-urban areas. Results underline the ecological plasticity of badgers, highlighting their capacity to accommodate urban pressures and providing city administrations with information to improve park management planning. Full article
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30 pages, 88126 KB  
Article
Landscape Dynamics of Cat Tien National Park and the Ma Da Forest Within the Dong Nai Biosphere Reserve, Socialist Republic of Vietnam
by Nastasia Lineva, Roman Gorbunov, Ekaterina Kashirina, Tatiana Gorbunova, Polina Drygval, Cam Nhung Pham, Andrey Kuznetsov, Svetlana Kuznetsova, Dang Hoi Nguyen, Vu Anh Tu Dinh, Trung Dung Ngo, Thanh Dat Ngo and Ekaterina Chuprina
Land 2025, 14(10), 2003; https://doi.org/10.3390/land14102003 - 6 Oct 2025
Viewed by 936
Abstract
The study of tropical landscape dynamics is of critical importance, particularly within protected areas, for evaluating ecosystem functioning and the effectiveness of natural conservation efforts. This study aims to identify landscape dynamics within the Dong Nai Biosphere Reserve (including Cat Tien National Park [...] Read more.
The study of tropical landscape dynamics is of critical importance, particularly within protected areas, for evaluating ecosystem functioning and the effectiveness of natural conservation efforts. This study aims to identify landscape dynamics within the Dong Nai Biosphere Reserve (including Cat Tien National Park and the Ma Da Forest) using remote sensing (Landsat and others) and geographic information system methods. The analysis is based on changes in the Enhanced Vegetation Index (EVI), land cover transformations, landscape metrics (Class area, Percentage of Landscape and others), and natural landscape fragmentation, as well as a spatio-temporal assessment of anthropogenic impacts on the area. The results revealed structural changes in the landscapes of the Dong Nai Biosphere Reserve between 2000 and 2024. According to Sen’s slope estimates, a generally EVI growth was observed in both the core and buffer zones of the reserve. This trend was evident in forested areas as well as in regions of the buffer zone that were previously occupied by highly productive agricultural land. An analysis of Environmental Systems Research Institute (ESRI) Land Cover and Land Cover Climate Change Initiative (CCI) data confirms the relative stability of land cover in the core zone, while anthropogenic pressure has increased due to the expansion of agricultural lands, mosaic landscapes, and urban development. The calculation of landscape metrics revealed the growing isolation of natural forests and the dominance of artificial plantations, forming transitional zones between natural and anthropogenically modified landscapes. The human disturbance index, calculated for the years 2000 and 2024, shows only a slight change in the average value across the territory. However, the coefficient of variation increased significantly by 2024, indicating a localized rise in anthropogenic pressure within the buffer zone, while a reduction was observed in the core zone. The practical significance of the results obtained lies in the possibility of their use for the management of the Dongnai biosphere Reserve based on a differentiated approach: for the core and the buffer zone. There should be a ban on agriculture and development in the core zone, and restrictions on urbanized areas in the buffer zone. Full article
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12 pages, 732 KB  
Article
Effects of Fruiting Plants on Frugivorous Bird Diversity Across Different Disturbed Habitats
by Yuzhen Mei, Zheng Wang and Ning Li
Diversity 2025, 17(9), 654; https://doi.org/10.3390/d17090654 - 17 Sep 2025
Viewed by 528
Abstract
Bird–plant interactions are critical for maintaining biodiversity and ecosystem function, and represent a key research focus in modern ecology. Using the line transect method, we surveyed bird diversity and collected plant trait data in four habitat types in the southern zone of Fujian’s [...] Read more.
Bird–plant interactions are critical for maintaining biodiversity and ecosystem function, and represent a key research focus in modern ecology. Using the line transect method, we surveyed bird diversity and collected plant trait data in four habitat types in the southern zone of Fujian’s Meihuashan National Nature Reserve during October–December 2021 and July–August 2022. This study investigated how plant traits (tree height, diameter at breast height (DBH), canopy density fruit amount) influence the diversity of frugivorous birds (species richness, abundance, Shannon–Wiener, Pielou, Simpson) across four disturbed habitats—villages (residential areas), bamboo forests (economic plantations), unguarded broad-leafed forests (wild forests), and nurtured broad-leafed forests (managed forests)—during both summer (breeding season) and autumn–winter (fruiting season). The key findings revealed that (1) significant correlations between plant traits and bird diversity were exclusive to the fruiting season, with no associations found in summer; (2) during autumn–winter, the key plant traits driving bird diversity varied distinctively by habitat: tree height and canopy density were paramount in villages; both habitat structure (canopy density) and fruit amount were important in bamboo forests, whereas in both broad-leafed forests, a combination of tree structure (height, DBH, canopy density) and fruit amount determined bird abundance; (3) a significant interaction between season and habitat was detected for community evenness, indicating that habitat type modulates the seasonal effects on community composition. This study underscores that in human-modified landscapes, conserving habitat structural complexity and key resource plants is crucial for sustaining frugivorous bird diversity and its ecological functions. Conservation strategies must account for seasonal dynamics to be effective. Full article
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15 pages, 1685 KB  
Article
Wildfires and Palm Species Response in a Terra Firme Amazonian Social Forest
by Tinayra T. A. Costa, Vynicius B. Oliveira, Maria Fabíola Barros, Fernando W. C. Andrade, Marcelo Tabarelli and Ima C. G. Vieira
Forests 2025, 16(8), 1271; https://doi.org/10.3390/f16081271 - 3 Aug 2025
Cited by 1 | Viewed by 851
Abstract
Tropical forests continue to experience high levels of habitat loss and degradation, with wildfires becoming a frequent component of human-modified landscapes. Here we investigate the response of palm species to the conversion of old-growth forests to successional mosaics, including forest patches burned during [...] Read more.
Tropical forests continue to experience high levels of habitat loss and degradation, with wildfires becoming a frequent component of human-modified landscapes. Here we investigate the response of palm species to the conversion of old-growth forests to successional mosaics, including forest patches burned during wildfires. Palms (≥50 cm height) were recorded once in 2023–2024, across four habitat classes: terra firme old-growth stands, regenerating forest stands associated with slash-and-burn agriculture, old-growth stands burned once and twice, and active cassava fields, in the Tapajós-Arapiuns Extractive Reserve, in the eastern Brazilian Amazon. The flammability of palm leaf litter and forest litter were also examined to assess the potential connections between palm proliferation and wildfires. A total of 10 palm species were recorded in this social forest (including slash-and-burn agriculture and resulting successional mosaics), with positive, negative, and neutral responses to land use. Species richness did not differ among forest habitats, but absolute palm abundance was greatest in disturbed habitats. Only Attalea spectabilis Mart. (curuá) exhibited increased relative abundance across disturbed habitats, including active cassava field. Attalea spectabilis accounted for almost 43% of all stems in the old-growth forest, 89% in regenerating forests, 90% in burned forests, and 79% in crop fields. Disturbed habitats supported a five-to-ten-fold increment in curuá leaves as a measure of habitat flammability. Although curuá litter exhibited lower flame temperature and height, its lower carbon and higher volatile content is expected to be more sensitive to fire ignition and promote the spread of wildfires. The conversion of old-growth forests into social forests promotes the establishment of palm-dominated forests, increasing the potential for a forest transition further fueled by wildfires, with effects on forest resilience and social reproduction still to be understood. Full article
(This article belongs to the Special Issue Ecosystem-Disturbance Interactions in Forests)
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14 pages, 3081 KB  
Article
Habitat Distribution Pattern of François’ Langur in a Human-Dominated Karst Landscape: Implications for Its Conservation
by Jialiang Han, Xing Fan, Ankang Wu, Bingnan Dong and Qixian Zou
Diversity 2025, 17(8), 547; https://doi.org/10.3390/d17080547 - 1 Aug 2025
Viewed by 722
Abstract
The Mayanghe National Nature Reserve, a key habitat for the endangered François’ langur (Trachypithecus francoisi), faces significant anthropogenic disturbances, including extensive distribution of croplands, roads, and settlements. These human-modified features are predominantly concentrated at elevations between 500 and 800 m and [...] Read more.
The Mayanghe National Nature Reserve, a key habitat for the endangered François’ langur (Trachypithecus francoisi), faces significant anthropogenic disturbances, including extensive distribution of croplands, roads, and settlements. These human-modified features are predominantly concentrated at elevations between 500 and 800 m and on slopes of 10–20°, which notably overlap with the core elevation range utilized by François’ langur. Spatial analysis revealed that langurs primarily occupy areas within the 500–800 m elevation band, which comprises only 33% of the reserve but hosts a high density of human infrastructure—including approximately 4468 residential buildings and the majority of cropland and road networks. Despite slopes >60° representing just 18.52% of the area, langur habitat utilization peaked in these steep regions (exceeding 85.71%), indicating a strong preference for rugged karst terrain, likely due to reduced human interference. Habitat type analysis showed a clear preference for evergreen broadleaf forests (covering 37.19% of utilized areas), followed by shrublands. Landscape pattern metrics revealed high habitat fragmentation, with 457 discrete habitat patches and broadleaf forests displaying the highest edge density and total edge length. Connectivity analyses indicated that distribution areas exhibit a more continuous and aggregated habitat configuration than control areas. These results underscore François’ langur’s reliance on steep, forested karst habitats and highlight the urgent need to mitigate human-induced fragmentation in key elevation and slope zones to ensure the species’ long-term survival. Full article
(This article belongs to the Topic Advances in Geodiversity Research)
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22 pages, 6878 KB  
Article
Separate Versus Unified Ecological Networks: Validating a Dual Framework for Biodiversity Conservation in Anthropogenically Disturbed Freshwater–Terrestrial Ecosystems
by Tianyi Cai, Qie Shi, Tianle Luo, Yuechun Zheng, Xiaoming Shen and Yuting Xie
Land 2025, 14(8), 1562; https://doi.org/10.3390/land14081562 - 30 Jul 2025
Viewed by 1314
Abstract
Freshwater ecosystems—home to roughly 10% of known species—are losing biodiversity to river-morphology alteration, hydraulic infrastructure, and pollution, yet most ecological network (EN) studies focus on terrestrial systems and overlook hydrological connectivity under human disturbance. To address this, we devised and tested a dual [...] Read more.
Freshwater ecosystems—home to roughly 10% of known species—are losing biodiversity to river-morphology alteration, hydraulic infrastructure, and pollution, yet most ecological network (EN) studies focus on terrestrial systems and overlook hydrological connectivity under human disturbance. To address this, we devised and tested a dual EN framework in the Yangtze River Delta’s Ecological Green Integration Demonstration Zone, constructing freshwater and terrestrial networks independently before merging them. Using InVEST Habitat Quality, MSPA, the MCR model, and Linkage Mapper, we delineated sources and corridors: freshwater sources combined NDWI-InVEST indicators with a modified, sluice-weighted resistance surface, producing 78 patches (mean 348.7 ha) clustered around major lakes and 456.4 km of corridors (42.50% primary). Terrestrial sources used NDVI-InVEST with a conventional resistance surface, yielding 100 smaller patches (mean 121.6 ha) dispersed across woodlands and agricultural belts and 658.8 km of corridors (36.45% primary). Unified models typically favor large sources from dominant ecosystems while overlooking small, high-value patches in non-dominant systems, generating corridors that span both freshwater and terrestrial habitats and mismatch species migration patterns. Our dual framework better reflects species migration characteristics, accurately captures dispersal paths, and successfully integrates key agroforestry-complex patches that unified models miss, providing a practical tool for biodiversity protection in disturbed freshwater–terrestrial landscapes. Full article
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21 pages, 14290 KB  
Article
Identifying Therapeutic Targets for Amyotrophic Lateral Sclerosis Through Modeling of Multi-Omics Data
by François Xavier Blaudin de Thé, Cornelius J. H. M. Klemann, Ward De Witte, Joanna Widomska, Philippe Delagrange, Clotilde Mannoury La Cour, Mélanie Fouesnard, Sahar Elouej, Keith Mayl, Nicolas Lévy, Johannes Krupp, Ross Jeggo, Philippe Moingeon and Geert Poelmans
Int. J. Mol. Sci. 2025, 26(15), 7087; https://doi.org/10.3390/ijms26157087 - 23 Jul 2025
Viewed by 1546
Abstract
Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease that primarily affects motor neurons, leading to loss of muscle control, and, ultimately, respiratory failure and death. Despite some advances in recent years, the underlying genetic and molecular mechanisms of ALS remain largely elusive. [...] Read more.
Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease that primarily affects motor neurons, leading to loss of muscle control, and, ultimately, respiratory failure and death. Despite some advances in recent years, the underlying genetic and molecular mechanisms of ALS remain largely elusive. In this respect, a better understanding of these mechanisms is needed to identify new and biologically relevant therapeutic targets that could be developed into treatments that are truly disease-modifying, in that they address the underlying causes rather than the symptoms of ALS. In this study, we used two approaches to model multi-omics data in order to map and elucidate the genetic and molecular mechanisms involved in ALS, i.e., the molecular landscape building approach and the Patrimony platform. These two methods are complementary because they rely upon different omics data sets, analytic methods, and scoring systems to identify and rank therapeutic target candidates. The orthogonal combination of the two modeling approaches led to significant convergences, as well as some complementarity, both for validating existing therapeutic targets and identifying novel targets. As for validating existing targets, we found that, out of 217 different targets that have been or are being investigated for drug development, 10 have high scores in both the landscape and Patrimony models, suggesting that they are highly relevant for ALS. Moreover, through both models, we identified or corroborated novel putative drug targets for ALS. A notable example of such a target is MATR3, a protein that has strong genetic, molecular, and functional links with ALS pathology. In conclusion, by using two distinct and highly complementary disease modeling approaches, this study enhances our understanding of ALS pathogenesis and provides a framework for prioritizing new therapeutic targets. Moreover, our findings underscore the potential of leveraging multi-omics analyses to improve target discovery and accelerate the development of effective treatments for ALS, and potentially other related complex human diseases. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
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14 pages, 1640 KB  
Article
Ecological Drivers and Community Perceptions: Conservation Challenges for the Critically Endangered Elongated Tortoise (Indotestudo elongata) in Jalthal Forest, Eastern Nepal
by Kamala Limbu, Asmit Subba, Nishan Limbu, Laxman Khanal and Randall C. Kyes
Diversity 2025, 17(7), 458; https://doi.org/10.3390/d17070458 - 28 Jun 2025
Viewed by 4918
Abstract
The elongated tortoise (Indotestudo elongata), a Critically Endangered (CR) species, faces numerous threats across its range. Yet, the ecological and anthropogenic factors affecting its conservation in fragmented habitats remain poorly understood. This study integrated field surveys and community questionnaires to assess [...] Read more.
The elongated tortoise (Indotestudo elongata), a Critically Endangered (CR) species, faces numerous threats across its range. Yet, the ecological and anthropogenic factors affecting its conservation in fragmented habitats remain poorly understood. This study integrated field surveys and community questionnaires to assess the distribution drivers and local perceptions, such as attitudes, knowledge, conservation practices, and perceived threats, in the Jalthal Forest, one of the last remnants of suitable habitat for the elongated tortoise in eastern Nepal. Using ArcMap, we established 138 randomly selected grids (500 m × 500 m) to evaluate the environmental covariates of tortoise occurrence and anthropogenic pressures. Generalized linear models revealed that tortoise occurrence was negatively associated with dense ground cover (β = −3.50, p = 0.017) and human disturbance (β = −8.11, p = 0.019). Surveys of local residents from community forest user groups (n = 236 respondents) indicated strong local support for tortoise conservation (69% willing to protect the species). Despite this, the respondents identified persistent threats, including hunting for bushmeat and traditional medicine (74%), habitat degradation (65%), and forest fires. While 60% of the respondents recognized the threatened species status, significant knowledge gaps regarding that status and ongoing illegal exploitation persisted. These findings underscore the need for targeted habitat management, reduced anthropogenic pressures, and community-led initiatives to align local attitudes with conservation actions. This study provides critical baseline data for conserving the elongated tortoise in human-modified landscapes and emphasizes the necessity of integrated ecological and socio-cultural strategies for its long-term survival. Full article
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21 pages, 4914 KB  
Article
Land Use Effects on the Space Use and Dispersal of an Apex Predator in an Ecotone Between Tropical Biodiversity Hotspots
by Bernardo Brandão Niebuhr, Sandra M. C. Cavalcanti, Ermeson A. Vilalba, Vanessa V. Alberico, João Carlos Zecchini Gebin, Danilo da Costa Santos, Ananda de Barros Barban, Raphael de Oliveira, Eliezer Gurarie and Ronaldo G. Morato
Diversity 2025, 17(6), 435; https://doi.org/10.3390/d17060435 - 19 Jun 2025
Viewed by 1723
Abstract
Assessing the ranging and dispersal behavior of apex predators and its consequences for landscape connectivity is of paramount importance for understanding population and ecosystem effects of anthropogenic land use change. Here, we synthesize ranging and dispersal ecological information on pumas (Puma concolor [...] Read more.
Assessing the ranging and dispersal behavior of apex predators and its consequences for landscape connectivity is of paramount importance for understanding population and ecosystem effects of anthropogenic land use change. Here, we synthesize ranging and dispersal ecological information on pumas (Puma concolor) and present estimates of how different land uses affect the space use and dispersal of pumas on fragmented landscapes in an ecotone between biodiversity hotspots in southeastern Brazil. Additionally, we evaluate the effect of animal translocations on dispersal and movement patterns. Using location data for 14 GPS-collared pumas and land use data, we assessed when, how long, and how far individuals dispersed; how forest loss and infrastructure influenced puma home range size; and how movement patterns changed according to land use and proximity to infrastructure, during ranging and dispersal, for residents, natural dispersers, and translocated individuals. We present the first detailed record on the dispersal of pumas in Brazil and in the tropics, including long-distance dispersals, and show that pumas moved faster and more linearly during dispersal than during ranging. Their movement was slower and their home ranges were smaller in more forested areas, underscoring the importance of forest as habitat. In contrast, movement rates were higher in open pastures, mainly during dispersal. Our study underscores the scarcity of research on puma space use and dispersal in South America and reveals partial divergences in dispersal behaviors compared to North America and temperate regions, especially concerning dispersal ages. Furthermore, we give the first steps in presenting how land cover and human infrastructure affect the movement of this apex predator in a tropical ecosystem, an important subsidy for land use management. We call for more comprehensive studies on the movement ecology of carnivores combined with long-term population monitoring, to allow linking individual behavior with metapopulation dynamics and landscape connectivity and drawing more effective measures to sustain their populations. Full article
(This article belongs to the Special Issue Landscape Biodiversity)
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51 pages, 2325 KB  
Review
Beyond Transgenic Mice: Emerging Models and Translational Strategies in Alzheimer’s Disease
by Paula Alexandra Lopes and José L. Guil-Guerrero
Int. J. Mol. Sci. 2025, 26(12), 5541; https://doi.org/10.3390/ijms26125541 - 10 Jun 2025
Cited by 5 | Viewed by 2859
Abstract
Alzheimer’s disease (AD) is a leading cause of dementia and a growing public health concern worldwide. Despite decades of research, effective disease-modifying treatments remain elusive, partly due to limitations in current experimental models. The purpose of this review is to critically assess and [...] Read more.
Alzheimer’s disease (AD) is a leading cause of dementia and a growing public health concern worldwide. Despite decades of research, effective disease-modifying treatments remain elusive, partly due to limitations in current experimental models. The purpose of this review is to critically assess and compare existing murine and alternative models of AD to identify key strengths, limitations, and future directions for model development that can enhance translational relevance and therapeutic discovery. Traditional transgenic mouse models have advanced the understanding of amyloid-beta and tau pathologies, but often fail to capture the complexity of sporadic, late-onset AD. In response, alternative models—including zebrafish, Drosophila melanogaster, Caenorhabditis elegans, non-human primates, and human brain organoids—are gaining traction due to their complementary insights and diverse experimental advantages. This review also discusses innovations in genetic engineering, neuroimaging, computational modelling, and drug repurposing that are reshaping the landscape of AD research. By integrating these diverse approaches, the review advocates for a multi-model, multidisciplinary strategy to improve the predictive power, accelerate clinical translation, and inform personalised therapeutic interventions. Ethical considerations and equitable access to diagnostics and emerging treatments are also emphasised. Ultimately, this work aims to support the development of more accurate, effective, and human-relevant models to combat AD. Full article
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
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