Search Results (84)

Early and accurate detection of mechanical damage in prunes is crucial for preserving postharvest quality and enabling automated sorting. This study proposes a practical and reproducible method for identifying cumulative bruising in prunes using visible–near-infrared (Vis–NIR) reflectance spectroscopy coupled with machine learning techniques. A self-developed impact simulation device was designed to induce progressive damage under controlled energy levels, simulating realistic postharvest handling conditions. Spectral data were collected from the equatorial region of each fruit and processed using a hybrid modeling framework comprising continuous wavelet transform (CWT) for spectral enhancement, uninformative variable elimination (UVE) for optimal wavelength selection, and support vector machine (SVM) for classification. The proposed CWT-UVE-SVM model achieved an overall classification accuracy of 93.22%, successfully distinguishing intact, mildly bruised, and cumulatively damaged samples. Notably, the results revealed nonlinear reflectance variations in the near-infrared region associated with repeated low-energy impacts, highlighting the capacity of spectral response patterns to capture progressive physiological changes. This research not only advances nondestructive detection methods for prune grading but also provides a scalable modeling strategy for cumulative mechanical damage assessment in soft horticultural products. Full article

Salvia, a medicinally and economically important genus, is widely used in traditional medicine, agriculture, and horticulture. This study compares the chloroplast genomes of eight East Asian Salvia species to assess genetic diversity, structural features, and evolutionary relationships. Complete chloroplast genomes were sequenced, annotated, and analyzed for gene content, codon usage, and repetitive sequences. Phylogenetic relationships were reconstructed using Maximum Likelihood, Maximum Parsimony and Bayesian inference. The genomes exhibited a conserved quadripartite structure (151,081–152,678 bp, GC content 37.9–38.1%), containing 114 unique genes with consistent arrangement. Codon usage favored A/T endings, with leucine (Leu) most frequent and cysteine (Cys) least. We identified 281 long sequence repeats (LSRs) and 345 simple sequence repeats (SSRs), mostly in non-coding regions. Comparative analysis revealed five hypervariable regions (trnH-psbA, rbcL-accD, petA-psbJ, rpl32-trnL, ycf1) as potential molecular markers. Phylogenetic analysis confirmed the monophyly of East Asian Salvia, dividing them into five clades, with Sect. Sonchifoliae basal. While G1, G3, and G8 were monophyletic, G5 and G6 were paraphyletic, and the G7-G8 relationship challenged traditional classifications. The genomic evidence provides crucial insights for resolving long-standing taxonomic uncertainties and refining the classification system of Salvia. These findings suggest a complex evolutionary history involving hybridization and incomplete lineage sorting, providing valuable genomic insights for Salvia phylogeny, taxonomy, and conservation. Full article

This study investigates the relationships among fruit quality traits, cracking susceptibility, and bioactive compounds in sweet cherries. Eleven genotypes collected from Northern Anatolia and two standard cultivars were evaluated. Key fruit characteristics were measured, and novel machine learning algorithms were applied to identify associations between variables. A negative correlation was found between the cracking index and fruit weight (r = −0.23), while a positive correlation was observed with total soluble solids (TSS) (r = 0.29). Furthermore, TSS was positively correlated with stem thickness (r = 0.67). Machine learning analyses indicated that DPPH and anthocyanin content were the most influential factors associated with the cracking index. A hybrid analytical pipeline was developed by integrating Principal Component Analysis (PCA) for dimensionality reduction, Random Forest regression for nonlinear prediction and Shapley Additive Explanations (SHAP) for interpretability. This triad offers a robust and replicable framework for trait-dissection studies in horticultural phenotyping, enabling deeper insights into complex trait interactions. These findings suggest that, beyond their recognized health benefits, bioactive compounds also positively contribute to fruit quality parameters. The results provide valuable insights for future sweet cherry breeding programs aimed at improving both nutritional and physical fruit traits. Full article

Hybrid tea roses (Rosa hybrida) are economically important horticultural crops and highly susceptible to heat stress, which significantly impacts flower quality and yield. As a key member of the heat shock protein (HSP) family, HSP70 protein acts as a molecular chaperone and exhibits diverse abiotic stress response functions in plants. A total of 113 HSP70 transcription factors (TFs) with varying physical and chemical properties were identified in the genome of hybrid tea rose. Phylogenetic analysis showed that the identified TFs could classify into three (I, II, and III) subfamilies, with most members (51 TFs) falling in subfamily II. Wide gene structural variations were observed among the three subfamilies, with group I and II members lacking introns, while group III members only harbored 1~4 exons and introns. Numerous cis-acting elements associated with abiotic stress, hormone response, growth and development responses, as well as light response were detected in the HSP70 gene promoters. In addition, protein interaction networks predicted a wide range of interactions between different hybrid tea rose HSP70 subfamilies. Gene expression analysis revealed that 57 HSP70 genes had strong organ specificity and response to heat stress in the hybrid tea rose plants. Notably, the expression levels of two RhHSP70 genes, RhHSP70-69 and RhHSP70-88, were significantly increased after heat stress, indicating that these two genes might be crucial for plant heat stress response. Subcellular localization of RhHSP70-69 and RhHSP70-88 revealed that their proteins were located in the nucleus. Our results are not only useful for future evaluation of the regulatory roles of RhHSP70 genes in the hybrid tea rose growth and development, but also provides key genes for future molecular breeding of heat tolerant plants. Full article

The Phalaenopsis genus, a horticulturally vital group within the Orchidaceae, dominates global floriculture markets through strategic cultivar innovation, scalable propagation, and data-driven cultivation. This review systematically examines the breeding, propagation, cultivation management, and potential applications of Phalaenopsis while providing insights into future research directions. The main contents include the following: Breeding innovations—This review outlines the taxonomy of the Phalaenopsis genus and highlights its intergeneric hybridization potential, which offers vast opportunities for developing novel horticultural varieties. By establishing clear breeding objectives, researchers employ diverse breeding strategies, including conventional crossbreeding and biotechnological approaches (e.g., mutation breeding, ploidy manipulation, genetic transformation, and CRISPR/Cas9 editing). Propagation and cultivation management—Analyses of Phalaenopsis tissue culture protocols covering explant selection, media optimization, and regeneration systems are summarized. Key factors for efficient cultivation are discussed, including temperature, light, water, nutrient management, cultivation medium selection, and integrated pest/disease management. Scientific environmental control ensures robust plant growth, synchronized flowering, and high-quality flower production. Emerging applications—Phalaenopsis exhibits promising applications in functional bioactive compound extraction (e.g., antioxidants and antimicrobial agents). This review summarizes current advancements in Phalaenopsis breeding, cultivation, and potential applications. Based on technological progress and market demands, future research directions are proposed to support the sustainable development of the Phalaenopsis industry. Full article

Lilium holds significant horticultural and ecological importance. Understanding the morpho-anatomical diversity of the stems can provide insights into taxonomy and breeding strategies. This study comprehensively examined the stem morpho-anatomy of 71 Lilium taxa to elucidate taxonomic and structural differences. For the first time, four distinct jigsaw-puzzle-shaped shapes of epidermal cells (Ep) in monocot stems, novel I-shaped and Co-xylem (O-, X-, W-, Q-shaped) vascular bundles (Vb) in Lilium stems, and quantitative characteristics (Vb density, xylem/phloem area ratio, etc.) were systematically discovered and analyzed. Asiatic (A) and Longiflorum × A (LA) hybrids displayed epidermal appendages, while Oritenal × Trumpet (OT) hybrids featured thicker sclerenchymatous rings (Sr). Collateral Vb in hybrids visually displayed bicollateral with degraded bundle sheaths (Bs), contrasting with intact circular Bs in wild species. Ward.D clustering categorized Lilium taxa into group A (Oritenal and OT hybrids) and B (A, LA, Trumpet, Longiflorum × Oriental hybrids and wild species), with Mantel’s test identified height, Ep shape, Ep length/width ratio, cortex/Sr thickness ratio and Bs integrity as key discriminators. Bending stems exhibited a higher Vb area. These findings establish a comprehensive pheno-anatomical framework for Lilium, which can guide future breeding programs and ecological studies. Full article

This study investigated seed storage behavior and seedling development patterns in the genus Phoenix L. (Arecaceae), addressing the knowledge gap regarding orthodox versus recalcitrant characteristics in these ecologically and economically significant palms. We examined the germination capacity and subsequent growth in 31 seed samples from various Phoenix species stored for up to 10 years at approximately 5 °C, at the Germplasm Bank at the Escuela Politécnica Superior de Orihuela, comprising 465 seeds monitored over a one-year period. The seed germination trials involved planting seeds in pots placed in an open-air greenhouse after ambient temperatures consistently exceeded 20 °C, typically after mid-June. Phoenix dactylifera, P. canariensis, P. theophrasti, the hybrid P. dactylifera × P. canariensis, and P. × “Palmeri” demonstrated orthodox seed storage behavior, maintaining viability for up to nine years. Conversely, P. sylvestris, P. pusilla, P. rupicola, and P. loureiroi consistently failed to germinate despite previous germination success, suggesting potential recalcitrant characteristics. Statistical analyses revealed that species identity and geographic origin exerted greater influence on germination success than seed age. Seedling development exhibited a conserved seasonal pattern across all species, with synchronized leaf emergence in September and March–July, followed by winter dormancy. Significant intraspecific variation was observed, particularly within P. dactylifera varieties, in both leaf production and final leaf length. These findings provide valuable insights into germplasm preservation and cultivation strategies, demonstrating that while some Phoenix species are suitable for long-term seed banking, others may require alternative conservation approaches. The observed species-specific and variety-specific differences offer important selection criteria for horticultural applications and conservation efforts. Full article

Soil pore water electrical conductivity (EC), as a comprehensive indicator of soil nutrient status, is closely linked to crop growth and development. Accurate prediction of pore water EC is therefore essential for informed and scientific crop management. This study focuses on a greenhouse rose cultivation site in Jiangchuan District, Yuxi City, Yunnan Province, China. Leveraging multi-parameter sensors deployed within the facility, we collected continuous soil data (temperature, moisture, EC, and pore water EC) and meteorological data (air temperature, humidity, and vapor pressure deficit) from January to December of 2024. We propose a hybrid prediction model—PSO–CNN–LSTM–BOA–XGBoost (PCLBX)—that integrates a particle swarm optimization (PSO)-enhanced convolutional LSTM (CNN–LSTM) with a Bayesian optimization algorithm-tuned XGBoost (BOA–XGBoost). The model utilizes highly correlated environmental variables to forecast soil pore water EC. The experimental results demonstrate that the PCLBX model achieves a mean square error (MSE) of 0.0016, a mean absolute error (MAE) of 0.0288, and a coefficient of determination (R²) of 0.9778. Compared to the CNN–LSTM model, MSE and MAE are reduced by 0.0001 and 0.0014, respectively, with an R² increase of 0.0015. Against the BOA–XGBoost model, PCLBX yields a reduction of 0.0006 in MSE and 0.0061 in MAE, alongside a 0.0077 improvement in R². Furthermore, relative to an equal-weight ensemble of CNN–LSTM and BOA–XGBoost, the PCLBX model shows improved performance, with MSE and MAE decreased by 0.0001 and 0.0005, respectively, and R² increased by 0.0007. These results underscore the superior predictive capability of the PCLBX model over individual and ensemble baselines. By enhancing the accuracy and robustness of soil pore water EC prediction, this model contributes to a deeper understanding of soil physicochemical dynamics and offers a scalable tool for intelligent perception and forecasting. Importantly, it provides agricultural researchers and greenhouse managers with a deployable and generalizable framework for digital, precise, and intelligent management of soil water and nutrients in protected horticulture systems. Full article

Red sweet peppers are economically important since they are widely farmed and consumed worldwide. As a high-value crop, it has a significant impact on the horticulture economy. This study aimed to improve the quality of sweet pepper fruits (total polyphenols; chlorophyll A and B; lycopene, β-carotene, tannins, ABTS, DPPH, protein and 15N) using three hybrids—Kornelya F1, Kaptur F1 and Napoca F1—four fertilization methods (chemical, organic, biologic and unfertilized), and two irrigation regimes (5200 and 7800 m³·ha⁻¹, respectively). The results revealed substantial similarities between organic and conventional management practices. From a genetic point of view, ‘Kornelya’ cultivar reacted well with most compounds with antioxidant effects. This study revealed that peppers react positively when subjected to hydric and nutrient stress, with the fruits having the highest values for total polyphenols, chlorophyll A and B, lycopene, ABTS, and DPPH. Following the interactions between factors, ‘Kornelya’ reacted positively to organic and unfertilized methods with an irrigation regime of 5200 m³·ha⁻¹. Full article

Water stress is a critical factor affecting the health and productivity of ornamental plants, yet early detection remains challenging. This study aims to investigate the spectral responses of four ornamental plant taxa—Rosa hybrid (rose), Itea virginica (itea), Spiraea nipponica (spirea), and Weigela florida (weigela)—under varying levels of water stress using hyperspectral imaging and principal component analysis (PCA). Hyperspectral data were collected across multiple wavelengths and PCA was applied to identify key spectral bands associated with different stress levels. The analyses revealed that the first two principal components captured a majority of variance in the data, with specific wavelengths around 680 nm, 760 nm, and 810 nm playing a significant role in distinguishing between the stress levels. Score plots demonstrated clear separation between different stress treatments, indicating that spectral signatures evolve distinctly over time as water stress progresses. Influence plots identified observations with disproportionate impacts on the PCA model, ensuring the robustness of the analysis. Findings suggest that hyperspectral imaging, combined with PCA, is a powerful tool for early detection and monitoring of water stress in ornamental plants, providing a basis for improved water management practices in horticulture. Full article

More than ten species of the Actinidia Lindl. genus bear edible fruits rich in biologically active compounds, which are essential and beneficial for human health. The most popular cultivars today are the large-fruited Actinidia species, A. deliciosa and A. chinensis, commonly known as kiwi. However, small-fruited kiwi cultivars are gaining prominence due to their high nutritional value, superior cold resistance, and suitability for temperate climates. In Russia, these are represented by Far Eastern species: A. arguta, A. kolomikta, and A. polygama. Despite increasing consumer interest, Russian Actinidia cultivars remain little studied, with fragmented genetic data available for breeding purposes. Our objective was to analyze the Actinidia collection at the Federal Horticultural Center for Breeding, Agrotechnology, and Nursery and the N.V. Tsitsin Main Botanical Garden (MBG RAS, Moscow), which includes samples from four species, A. kolomikta, A. arguta, A. polygama, A. purpurea, interspecific hybrids, and derived varieties, using RAD sequencing. We assessed the genetic variability of all species, identified population groups within A. kolomikta and A. arguta based on origin, determined ploidy levels across the collection, and identified a set of SNP markers associated with valuable agronomic traits. Full article

Aerides rosea (Orchidaceae) boasts high ornamental value due to its pleasant aroma, foxtail spike, and elegant floral morphology. Inducing A. rosea to become tetraploid enhances horticultural traits and facilitates fertile intergeneric hybrids through crosses with other market-available tetraploid species. The experimental design involved the application of colchicine at varying concentrations—0.05%, 0.1%, and 0.2%—to a solid medium. Exposure durations were 5, 10, and 15 days, with treatments conducted under sterile conditions on 6-week-old protocorms post-germination. Results indicated that the protocorms were sensitive to colchicine concentrations exceeding 0.05%, with high concentrations leading to a mortality rate exceeding 50%. Flow cytometry (FCM) with 4′,6-diamidino-2-phenylindole (DAPI) staining confirmed a doubling of chromosome numbers in tetraploid plants (2n = 4x = 76) compared to diploid controls (2n = 2x = 38). Induction efficiency was significantly influenced by colchicine concentration and treatment duration. A 10-day treatment with 0.2% colchicine yielded a 70.00% tetraploid induction rate; however, considering protocorm survival, a 5-day treatment with 0.05% colchicine was preferable, achieving a 63.55% survival rate and a 56.67% tetraploid induction rate. Tetraploid plants exhibited distinct morphological traits, such as a more compact growth habit, thicker leaves, and increased stem and root thickness. Leaf morphology changes included larger stomata with reduced density, denser spongy mesophyll, and more pronounced venation. Tetraploids also demonstrated a 1.94-fold increase in genome size compared to diploids. The tetraploid genotypes developed in this study hold significant potential for future Aerides breeding programs. Full article

This study delves into the multifaceted realm of citrus fruits, exploring their significance and socioeconomic implications from their early introduction to Western Muslim and Renaissance gardens, tracing their journey throughout history. Employing a multidisciplinary approach, drawing from biological, archaeobotanical, iconographic, and textual sources, our study offers a comprehensive exploration of citrus symbolism and cultural significance, integrating historical, artistic, horticultural, and socioeconomic viewpoints. The genus Citrus (Rutaceae) comprises around thirty species and its natural habitat spans from the southern slopes of the Himalayas to China, Southeast Asia, nearby islands, and Queensland. Originating from only four of these species, humans have cultivated hundreds of hybrids and thousands of varieties, harnessing their culinary, medicinal, and ornamental potential worldwide. We delve into the symbolic value of citrus fruits, which have served as indicators of economic status and power. From their early presence in Mediterranean religious rituals to their depiction in opulent Roman art and mythical narratives like the Garden of the Hesperides, citrus fruits have epitomized luxury and desire. Christian lore intertwines them with the forbidden fruit of Eden, while Islamic and Sicilian gardens and Renaissance villas signify their prestige. We analyze diverse perspectives, from moralists to hedonists, and examine their role in shaping global agriculture, exemplified by rare varieties like aurantii foetiferi. Full article

The Brassica oleracea L. species embrace important horticultural crops, such as broccoli, cauliflower, and cabbage, which are highly valued for their beneficial nutritional effects. However, the complexity of flower emasculation in these species has forced breeders to adopt biotechnological approaches such as somatic hybridization to ease hybrid seed production. Protoplasts entail a versatile tool in plant biotechnology, supporting breeding strategies that involve genome editing and hybridization. This review discusses the use of somatic hybridization in B. oleracea L. as a biotechnological method for developing fusion products with desirable agronomic traits, particularly cytoplasmic male sterile (CMS) condition. These CMS lines are critical for implementing a cost-effective, efficient, and reliable system for producing F1 hybrids. We present recent studies on CMS systems in B. oleracea L. crops, providing an overview of established models that explain the mechanisms of CMS and fertility restoration. Additionally, we emphasize key insights gained from protoplast fusion applied to B. oleracea L. breeding. Key steps including pre-treatments of donor plants, the main tissues used as sources of parental protoplasts, methods for obtaining somatic hybrids and cybrids, and the importance of establishing a reliable plant regeneration method are discussed. Finally, the review explores the incorporation of genome editing technologies, such as CRISPR-Cas9, to introduce multiple agronomic traits in Brassica species. This combination of advanced biotechnological tools holds significant promise for enhancing B. oleracea breeding programs in the actual climate change context. Full article

The genus Pourthiaea Decne., a deciduous woody group with high ornamental value, belongs to the family Rosaceae. Here, we reported newly sequenced plastid genome sequences of Pourthiaea beauverdiana (C. K. Schneid.) Hatus., Pourthiaea parvifolia E. Pritz., Pourthiaea villosa (Thunb.) Decne., and Photinia glomerata Rehder & E. H. Wilson. The plastomes of these three Pourthiaea species shared the typical quadripartite structures, ranging in size from 159,903 bp (P. parvifolia) to 160,090 bp (P. beauverdiana). The three Pourthiaea plastomes contained a pair of inverted repeat regions (26,394–26,399 bp), separated by a small single-copy region (19,304–19,322 bp) and a large single-copy region (87,811–87,973 bp). A total of 113 unique genes were predicted for the three Pourthiaea plastomes, including four ribosomal RNA genes, 30 transfer RNA genes, and 79 protein-coding genes. Analyses of inverted repeat/single-copy boundary, mVISTA, nucleotide diversity, and genetic distance showed that the plastomes of 13 Pourthiaea species (including 10 published plastomes) are highly conserved. The number of simple sequence repeats and long repeat sequences is similar among 13 Pourthiaea species. The three non-coding regions (trnT-GGU-psbD, trnR-UCU-atpA, and trnH-GUG-psbA) were the most divergent. Only one plastid protein-coding gene, rbcL, was under positive selection. Phylogenetic analyses based on 78 shared plastid protein-coding sequences and 29 nrDNA sequences strongly supported the monophyly of Pourthiaea. As for the relationship with other genera in our phylogenies, Pourthiaea was sister to Malus in plastome phylogenies, while it was sister to the remaining genera in nrDNA phylogenies. Furthermore, significant cytonuclear discordance likely stems from hybridization events within Pourthiaea, reflecting complex evolutionary dynamics within the genus. Our study provides valuable genetic insights for further phylogenetic, taxonomic, and species delimitation studies in Pourthiaea, as well as essential support for horticultural improvement and conservation of the germplasm resources. Full article