Search Results (1,033)

Sonoplasma treatment (SPT), which combines hydrodynamic cavitation with low-temperature plasma discharge in water, has been proposed as an advanced oxidation process for reducing biological contamination. By generating physical stressors and reactive oxygen species, including hydrogen peroxide (HP), SPT may inactivate microorganisms, but its effects on stress-resistant filamentous fungi remain insufficiently characterized. We examined two phytopathogenic fungi with contrasting pigmentation: melanized Alternaria alternata and hyaline Fusarium solani. Spore suspensions were exposed to direct and indirect SPT at 30 kHz, and viability, biomass accumulation, conidial production, allelopathic activity, and pigmentation-associated spectral responses were assessed immediately after treatment and after storage. Fungus F. solani showed greater susceptibility, with reduced colony-forming capacity and suppressed biomass production, although surviving propagules showed increased sporulation. In contrast, A. alternata maintained viable growth under the tested conditions and showed stimulation of growth-related and reproductive endpoints, together with darker colony pigmentation. These responses are consistent with pigmentation-associated tolerance to SPT-induced physical and oxidative stress, but do not establish melanin as the sole causal mechanism. SPT efficacy against filamentous fungi is therefore species-dependent and may be limited when resistant melanized taxa are present. Full article

The aim of the study was to evaluate the physicochemical, microbiological, and biochemical quality of commercially available dry-aged beef produced in Poland, with particular emphasis on differences between the crust and the interior of steaks. Fourteen samples (11 rib-eye and 3 sirloin) from different producers were analysed. The colour parameters, pH, water activity, thiobarbituric acid reactive substances, water-holding capacity, basic chemical composition, texture, microbial counts, free amino acids, biogenic amines profiles, and consumer sensory quality were determined. Microbiological analyses covered total plate count, psychrotrophic bacteria, lactic acid bacteria, Enterobacteriaceae, Pseudomonas spp., Brochothrix thermosphacta, yeasts and Moulds, as well as the presence of Salmonella spp. and Listeria monocytogenes. Fungal species isolated from selected crust samples were identified using ITS rDNA sequencing. Significant variability among products was observed in colour (L*: 31.1–45.0), pH (5.3–6.7), and water activity (0.92–0.99). Compared with the interior, the crust exhibited higher lipid oxidation (TBARS up to 2.31 mg MDA/kg), higher microbial loads, and greater accumulation of biogenic amines, including tyramine, cadaverine, and putrescine. Rib-eye 6, Rib-eye 7, Rib-eye 8, Rib-eye 10, and Rib-eye 11 showed the highest sensory acceptance. On the crust of selected highly rated steaks filamentous fungi such as Mucor flavus and Thamnidium elegans were identified, which suggests environmental colonisation and potential technological relevance. Full article

Microalgae–fungal pellets have been studied as a versatile and robust biotechnological platform, offering significant advantages for microalgal biomass harvesting, wastewater treatment, biofuels production and/or obtaining of value-added products. This review presents an integrated analysis of the mechanisms governing the formation, stability, and functionality of these systems, combining physicochemical, biological, and mathematical modelling approaches and aims to describe the current state of the art and main research needs. The aggregation process is strongly influenced by the complementarity of the surface properties of microalgae and filamentous fungi, including electrostatic interactions, production of extracellular polymeric substances (EPSs), and modifications in surface roughness. Recent advances in multiscale characterization techniques, such as confocal microscopy, micro-computed tomography, atomic force microscopy, and X-ray photoelectron spectroscopy, have allowed a more precise elucidation of the internal architecture and surface chemistry of the pellets. In parallel, biological characterization through enzymatic assays, oxidative stress biomarkers, and photosynthetic activity analyses has provided relevant information on the metabolic responses and functional resilience of the consortium. Additionally, the incorporation of mathematical flocculation models can contribute to the prediction of pellet growth, density, and stability, supporting process optimization and application. The understanding of these interaction phenomena is important for the design of high-yield and efficient systems, including their development and validation, to expand the use of microalgae–fungal pellets in bioprocesses, as evidenced by this review. Full article

Global food waste management necessitates circular bioeconomy solutions to transform organic residues into high-value nutrients to address nutritional demands. This study investigated the valorization of two abundant waste streams, stale bread and sunflower oil through solid state fermentation using food-grade filamentous fungi. Three strains, Neurospora intermedia, Aspergillus oryzae and Rhizopus oryzae were evaluated for the bioconversion of stale bread. Oil supplementation levels of 10, 20 and 30% (g/100 g dry matter) using both fresh and spent sunflower oil were tested to assess changes in proximate composition, characterizing fungal growth dynamics and mycelial development. Furthermore, modifications in fatty acid profiles and hydrolytic enzyme activities were analyzed to determine species responses to oil source and concentration. The results demonstrated that N. intermedia achieved peak protein levels of 36% (g/100 g) alongside efficient starch catabolism, while 10% fresh oil supplementation induced a significant protein increase (26%) in A. oryzae. Regarding lipid accumulation, 10% spent oil supported higher fat content in R. oryzae (19%) compared to fresh oil (17%). PUFA/SFA ratio reached its maximum in A. oryzae with the highest of 5.91 ± 0.56 under 10% fresh oil. Enzymatic analysis identified A. oryzae as the most efficient lipase producer, reaching a maximum activity of approximately 0.10 U/g at 10% spent oil supplementation. Conversely, R. oryzae lipase activity peaked at 20% supplementation (0.08 U/g), reflecting its high capacity for lipid accumulation. These findings establish a potent bioprocess for upcycling mixed food wastes into enhanced functional ingredients for sustainable food and feed systems. Full article

Fungal infections pose diagnostic challenges in both human and veterinary medicine, as traditional detection methods such as fungal culture are time-consuming, microscopy is operator-dependent, and molecular detection assays often require specialized instrumentation and trained personnel, which can limit their routine clinical application. This study developed a sandwich immunoassay to detect β-1,3- and β-1,6-glucans, two major components of the fungal cell wall, based on two catalytically inactive glucanase mutants, LamA_E175Q and Neg1_E321Q. The sandwich ELISA exhibited higher detection sensitivity than conventional ITS-based PCR for Saccharomyces cerevisiae and Candida albicans under the conditions of this study. Using pre-coated plates, the sample-processing and detection workflow can be completed in approximately 40 min. It effectively detected a wide range of fungal species, including yeasts (Saccharomyces cerevisiae, Candida albicans) and filamentous fungi such as dermatophytes and non-dermatophyte molds. In a preliminary clinical cohort, the assay identified β-glucan signals in all 21 samples confirmed positive for dermatophytes, while no signal was detected in 20 negative samples, suggesting potential clinical applicability. This dual-enzyme sandwich immunoassay provides a rapid and low-cost complementary tool for broad-spectrum fungal screening, which may help guide further confirmatory diagnostics and timely clinical decision-making. Full article

Cultivable fungi are important components of freshwater ecosystems, yet their diversity in Amazonian aquatic environments remains poorly explored. This study evaluated cultivable fungal communities associated with water, sediment, and submerged wood in the Negro, Solimões, and Tapajós Rivers, representing the major black-, white-, and clear-water systems of the Amazon basin, respectively. Samples were collected along 25 m transects, fungi were isolated on potato dextrose agar, grouped into morphotypes, and identified morphologically. Diversity was assessed using richness, Shannon, Simpson, Pielou, and Sørensen indices. Overall, 130 isolates and 75 morphotypes were recorded, with a predominance of morphotypes assigned to filamentous Ascomycota and widespread occurrence of Aspergillus and Penicillium. Solid substrates yielded greater fungal abundance and richness than water samples. Submerged wood from the Negro River showed the highest overall cultivable fungal abundance, whereas the Tapajós River showed the highest diversity in water and sediment and the highest richness in both substrates. The Solimões River showed stronger dominance by a limited number of morphotypes, particularly in submerged wood. Sørensen similarity values indicated low compositional overlap among rivers, especially for submerged wood communities, suggesting apparent differentiation among river-associated cultivable fungal assemblages. Together, these exploratory results suggest that substrate type, hydrochemical differences, and potential temporal effects may be associated with the structure of cultivable fungal communities in Amazonian rivers. Full article

Mycotoxins are toxic secondary metabolites produced by filamentous fungi, which extensively contaminate agricultural products such as grains and nuts. Common mycotoxins, including aflatoxin B1, ochratoxin A, and deoxynivalenol, can induce liver cancer, kidney damage, neural tube defects, and immune suppression, necessitating highly sensitive detection methods to ensure food safety. Conventional techniques are limited by complex procedures and insufficient sensitivity. Electrochemiluminescence (ECL), owing to its high sensitivity, low background signal, and rapid response, has emerged as a promising strategy for mycotoxin analysis. In this context, metal–organic frameworks (MOFs), with their high surface area and tunable structures, have been widely employed in ECL sensors to improve sensing performance. This review summarizes the construction strategies of MOF-based ECL sensors, the diverse functional roles of MOFs in ECL sensing, the associated sensing mechanisms, and the applications of these sensors for the detection of mycotoxins in food. Current challenges, including material stability, sensor reproducibility, and practical applicability, are discussed, and future directions are outlined. Particular emphasis is placed on the development of stable MOF materials, their integration into portable and intelligent ECL sensing platforms, and the establishment of standardized and scalable production methods to enable practical food safety monitoring. Full article

Lemon processing by-products are rich in flavonoids, limonoids, and phenolic acids, but their direct utilization is limited by glycoside-dominant flavonoid profiles, bitterness-associated limonoids, and insufficiently defined valorization strategies. This study compared eight food-relevant microorganisms, including lactic acid bacteria, Bacillus, yeast, and filamentous fungi, using a common aerobic submerged fermentation framework for lemon by-products. Rather than evaluating fermentation as a single uniform process, the study aimed to determine whether different microbial groups could redirect the same substrate toward distinct functional remodeling profiles. Targeted HPLC analysis of flavonoids, limonoids, and phenolic acids, together with DPPH and ABTS radical-scavenging assays, revealed clear strain-dependent differences in metabolite remodeling and antioxidant outcomes. L. plantarum showed the most consistent antioxidant enhancement profile, characterized by increased hesperetin and phenolic acid responses together with low DPPH and ABTS IC₅₀ values. L. pentosus promoted flavonoid remodeling but showed a more timing-sensitive antioxidant response. S. cerevisiae tended to preserve glycosylated flavonoids and showed a release-oriented phenolic acid profile with strong early ABTS activity. R. stolonifer exhibited the most pronounced limonoid remodeling, including marked limonin reduction and obacunone accumulation, suggesting potential relevance for bitterness-oriented applications. These findings demonstrate that different microorganisms can be functionally classified according to their dominant remodeling tendencies, including antioxidant enhancement, flavonoid conversion, glycosylated flavonoid preservation, phenolic acid release, and limonoid-associated debittering. This functional classification provides a practical basis for selecting microorganisms according to the intended application of lemon by-product valorization. Full article

Leishmaniases are vector-borne diseases transmitted by phlebotomine sand flies. While bacterial associations in sand fly microbiota are well studied, fungal communities remain poorly characterized, despite their potential role in insect biology and parasite transmission. This study aimed to isolate and characterize yeast-like and filamentous fungi from different developmental stages of Lutzomyia longipalpis, the main vector of visceral leishmaniasis in the Americas, to expand knowledge on fungal microbiota and its possible relevance to vector–parasite interactions. Sand fly eggs, larvae, pupae, and adults were sampled from a laboratory colony. Fungi were isolated from insect tissues and diets using culture-based methods. Morphological identification was complemented by partial sequencing of the ITS1-5.8S-ITS2 rDNA region to identify the species. Four fungi were consistently recovered: Candida guilliermondii, Cutaneotrichosporon dermatis, Penicillium sp., and Aspergillus sp. Their presence varied across developmental stages. Presence in the gut was observed for Cu. dermatis, Penicillium sp. and Aspergillus sp. in larvae and C. guilliermondii in adult females. Evidence suggested their presence in different stages from larvae to pupae, and sex-specific differences in adults, with fungi detected only in females. This work documented the mycobiota that may be associated with L. longipalpis, including the first report of Cutaneotrichosporon in sand flies. These findings highlight fungi that may be potential modulators of sand fly biology and Leishmania development, warranting further investigation into their ecological and epidemiological roles. Full article

Microplastic pollution has become a significant environmental concern due to its persistence and widespread impact across ecosystems. These plastic particles (1 μm to 5 mm), originating from larger plastic debris or industrial sources, accumulate in diverse habitats, affecting biodiversity and human health. Microplastics resist natural degradation, posing challenges to both ecological sustainability and waste management strategies. Although numerous studies have explored microbial degradation, most existing research focuses primarily on bacteria, leaving the role of filamentous fungi comparatively underexplored. This represents a significant research gap, because fungi secrete a variety of extracellular enzymes, including laccases, peroxidases, and esterases, which play crucial roles in the breakdown of synthetic polymers. These enzymes facilitate the depolymerization of microplastics by targeting polymer chains and increasing their susceptibility to further microbial degradation. However, the underlying enzymatic mechanisms and their effectiveness in microplastic remediation remain insufficiently characterized. Here, we critically review the potential of filamentous fungi for microplastic biodegradation, emphasizing their oxidative and hydrolytic enzyme systems, biosurfactant production, and mechanisms of adsorption and mineralization. The novelty of this review lies in consolidating the most recent mechanistic insights into fungal-driven depolymerization pathways, integrating them with advances in genetic engineering, bioprocess scale-up, and regulatory perspectives, areas rarely combined in previous reviews. We identify current limitations related to environmental applicability, enzyme accessibility, and the lack of standardized protocols, and propose strategies to overcome these challenges through enzyme immobilization, microbial consortia design, and synthetic biology approaches. By addressing these gaps, filamentous fungi may contribute to the development of sustainable strategies for plastic pollution mitigation and support circular economy approaches toward polymer biodegradation. Full article

Inadequate surface sanitization represents a significant risk to sterility assurance and regulatory compliance. Therefore, an effective cleaning and disinfection program is a critical component of contamination control strategies in pharmaceutical facilities manufacturing sterile medicinal products. This study aimed to standardize a carrier-based methodology for evaluating the efficacy of disinfectants against in-house environmental isolates recovered from a pharmaceutical industry facility. Nine representative strains were selected from five different groups—Gram-positive non-spore-forming bacteria (Micrococcus luteus and Kocuria spp.), Gram-positive spore-forming bacteria (two Bacillus spp. strains), Gram-negative bacteria (Pseudomonas aeruginosa and Acinetobacter haemolyticus), yeasts (Candida parapsilosis and Rhodotorula mucilaginosa), and filamentous fungus (Penicillium spp.)—based on historical environmental monitoring data (2012–2022), and were characterized using matrix-assisted laser desorption/ionization-time-of-flight/mass spectrometry (MALDI-TOF MS) and molecular sequencing (16S rRNA or D2 LSU rDNA). Disinfectant efficacy was assessed on stainless-steel and low-density polyethylene surfaces using NF T 72-281:2014 with adaptations, testing alcohol 70%, sodium hypochlorite 0.5%, quaternary ammonium 0.05%, peracetic acid 0.5%, and accelerated hydrogen peroxide wipes. All agents demonstrated ≥5 log₁₀ reductions against vegetative bacteria and fungi on both surfaces. However, variable sporicidal performance was observed, particularly for one Bacillus cereus group strain (B1342/15), which showed limited viability reduction on stainless steel. These findings highlight inter-strain variability and the greater tolerance of surface-associated spores. The study reinforces the importance of carrier-based testing using in-house isolates to ensure realistic validation of disinfectants and to strengthen microbiological risk management within pharmaceutical contamination control strategies. Full article

Although solid-state fermentation (SSF) has long been used in food production in various traditional contexts, it is now emerging as a particularly promising strategy for the development of functional food ingredients from plant materials and agro-industrial side streams. This review examines recent advances in the application of SSF to enhance the nutritional, functional, sensory, and technological properties of food matrices. Current evidence indicates that SSF can increase the bioactive potential of plant-based substrates by promoting the release and biotransformation of phenolic compounds, while also improving antioxidant capacity, protein digestibility, and techno-functional performance. In addition, the process may support the formation of food-relevant metabolites, including vitamins, peptides, organic acids, and other secondary compounds, while reducing selected antinutritional, allergenic, and undesirable constituents. These compositional changes are often accompanied by modifications in aroma, volatile profiles, visual attributes, and, more recently, gut microbiota-related effects. Attention is given to the use of fungal-based processes for the valorization of cereals, legumes, fruit by-products, and other underutilized substrates. The review also addresses the growing industrial interest in SSF, especially in relation to mycelium-based foods, alternative proteins, functional ingredients, and feed applications. Despite its clear potential, the broader implementation of SSF will require further research and development to support its effective translation into food applications. Full article

Microbial pigments are secondary metabolites that represent promising alternatives to synthetic colorants, offering advantages even over other natural sources. These pigments can be produced independently of seasonality and at low cost, especially when using agro-industrial residues as substrates, and their production can be optimized. Bioprospecting of microorganisms in unexplored environments offers valuable opportunities to discover safer and more efficient pigment producers. Brazil harbors vast biodiversity across multiple biomes, providing a rich reservoir for such discoveries. Biomes such as the Atlantic Forest, Pampa, Pantanal and Coastal Marine are still poorly explored with respect to the bioprospecting of pigment-producing microorganisms, representing a valuable opportunity for the discovery of novel pigments. However, several bottlenecks still hinder the regulatory approval of microbial pigments, particularly those produced by filamentous fungi, due to the frequent co-production of mycotoxins. To overcome these challenges, genetic engineering tools are crucial for eliminating mycotoxin co-production. CRISPR-Cas9, CRISPRi and CRISPR-Cpf1 have become the most widely used techniques for this purpose. Another key application of CRISPR is the enhancement of pigment yields, which can accelerate the industrial adoption of microbial pigments. Together, these two strategies, bioprospecting new environments and genetic engineering, can significantly speed up the transition from synthetic pigments to safer and more eco-friendly microbial alternatives. Full article

This study investigates the accumulation, volatilization, and metabolic effects of two iodine species (iodide and iodate) in selected filamentous fungi. Six environmentally relevant fungal strains were cultivated under controlled conditions, and iodine distribution between biomass, culture medium, and volatilized fraction was quantified using ICP-MS. Additionally, changes in extracellular metabolite production were determined by capillary isotachophoresis. The results revealed pronounced species-specific differences in iodine transformation. Fusarium poae exhibited the highest accumulation capacity, reaching up to 409.5 mg·kg⁻¹ dry weight, and showed the most efficient overall iodine uptake from the cultivation medium. In contrast, Alternaria tenuissima and Trichoderma viride demonstrated elevated volatilization rates, particularly under iodate treatment, indicating distinct transformation pathways. Exposure to iodine species also induced significant changes in extracellular organic acids production. Increased levels of acetate, succinate, and sorbate suggest that iodine affects fungal metabolic activity, likely through stress-related shifts in central carbon metabolism and redox balance. These findings demonstrate that filamentous fungi employ diverse strategies for iodine transformation, including accumulation, volatilization, and metabolic adaptation. The results highlight the important role of fungi in regulating iodine speciation and mobility and provide new insights into their contribution to the terrestrial iodine cycle. Full article

Aspergillosis encompasses a heterogeneous spectrum of diseases caused by filamentous fungi of the genus Aspergillus, ranging from allergic airway disorders and chronic pulmonary infection to rapidly progressive invasive disease. Aspergillus fumigatus is the predominant pathogen worldwide, although other species, including Aspergillus flavus, Aspergillus terreus and cryptic species, contribute to morbidity and may exhibit intrinsic or acquired antifungal resistance. Early and accurate laboratory diagnosis is essential for timely treatment, appropriate antifungal selection, and stewardship. Traditional culture remains foundational, enabling confirmation of viable organisms, species-level identification, and antifungal susceptibility testing, but sensitivity is limited and turnaround times are prolonged. Non-culture approaches—including galactomannan, β-D-glucan, lateral flow assays, PCR, and next-generation sequencing—enhance diagnostic sensitivity, facilitate early detection, and allow identification of resistance-associated mutations. Optimal diagnostic performance is achieved through integrated, multimodal strategies combining laboratory tests with clinical and radiological findings. In invasive disease, concurrent use of biomarkers and molecular assays improves specificity and positive predictive value, while in allergic bronchopulmonary aspergillosis, immunological markers remain central. Future directions include standardised molecular protocols, novel antigenic and host-based biomarkers, and cost-effective, risk-adapted diagnostic algorithms to refine detection, guide therapy, and improve patient outcomes. Full article