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Search Results (243)

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Keywords = calcium depletion

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10 pages, 1191 KiB  
Article
RNA Sequencing on Muscle Biopsies from Exertional Rhabdomyolysis Patients Revealed Down-Regulation of Mitochondrial Function and Enhancement of Extracellular Matrix Composition
by Mingqiang Ren, Luke P. Michaelson, Ognoon Mungunsukh, Peter Bedocs, Liam Friel, Kristen Cofer, Carolyn E. Dartt, Nyamkhishig Sambuughin and Francis G. O’Connor
Genes 2025, 16(8), 930; https://doi.org/10.3390/genes16080930 - 2 Aug 2025
Viewed by 189
Abstract
Background/Objective: Exertional rhabdomyolysis (ER) is primarily driven by mechanical stress on muscles during strenuous or unaccustomed exercise, often exacerbated by environmental factors like heat and dehydration. While the general cellular pathway involving energy depletion and calcium overload is understood in horse ER models, [...] Read more.
Background/Objective: Exertional rhabdomyolysis (ER) is primarily driven by mechanical stress on muscles during strenuous or unaccustomed exercise, often exacerbated by environmental factors like heat and dehydration. While the general cellular pathway involving energy depletion and calcium overload is understood in horse ER models, the underlying mechanisms specific to the ER are not universally known within humans. This study aimed to evaluate whether patients with ER exhibited transcriptional signatures that were significantly different from those of healthy individuals. Methods: This study utilized RNA sequencing on skeletal muscle samples from 19 human patients with ER history, collected at a minimum of six months after the most recent ER event, and eight healthy controls to investigate the transcriptomic landscape of ER. To identify any alterations in biological processes between the case and control groups, functional pathway analyses were conducted. Results: Functional pathway enrichment analyses of differentially expressed genes revealed strong suppression of mitochondrial function. This suppression included the “aerobic electron transport chain” and “oxidative phosphorylation” pathways, indicating impaired energy production. Conversely, there was an upregulation of genes associated with adhesion and extracellular matrix-related pathways, indicating active restoration of muscle function in ER cases. Conclusions: The study demonstrated that muscle tissue exhibited signs of suppressed mitochondrial function and increased extracellular matrix development. Both of these facilitate muscle recovery within several months after an ER episode. Full article
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17 pages, 6360 KiB  
Article
Integrating Lanthanide-Reclaimed Wastewater and Lanthanide Phosphate in Corn Cultivation: A Novel Approach for Sustainable Agriculture
by George William Kajjumba, Savanna Vacek and Erica J. Marti
Sustainability 2025, 17(15), 6734; https://doi.org/10.3390/su17156734 - 24 Jul 2025
Viewed by 343
Abstract
With increasing global challenges related to water scarcity and phosphorus depletion, the recovery and reuse of wastewater-derived nutrients offer a sustainable path forward. This study evaluates the dual role of lanthanides (Ce3+ and La3+) in recovering phosphorus from municipal wastewater [...] Read more.
With increasing global challenges related to water scarcity and phosphorus depletion, the recovery and reuse of wastewater-derived nutrients offer a sustainable path forward. This study evaluates the dual role of lanthanides (Ce3+ and La3+) in recovering phosphorus from municipal wastewater and supporting corn (Zea mays) cultivation through lanthanide phosphate (Ln-P) and lanthanide-reclaimed wastewater (LRWW, wastewater spiked with lanthanide). High-purity precipitates of CePO4 (98%) and LaPO4 (92%) were successfully obtained without pH adjustment, as confirmed by X-ray photoelectron spectroscopy (XPS) and energy-dispersive spectroscopy (EDS). Germination assays revealed that lanthanides, even at concentrations up to 2000 mg/L, did not significantly alter germination rates compared to traditional coagulants, though root and shoot development declined above this threshold—likely due to reduced hydrogen peroxide (H2O2) production and elevated total dissolved solids (TDSs), which induced physiological drought. Greenhouse experiments using desert-like soil amended with Ln-P and irrigated with LRWW showed no statistically significant differences in corn growth parameters—including plant height, stem diameter, leaf number, leaf area, and biomass—when compared to control treatments. Photosynthetic performance, including stomatal conductance, quantum efficiency, and chlorophyll content, remained unaffected by lanthanide application. Metal uptake analysis indicated that lanthanides did not inhibit phosphorus absorption and even enhanced the uptake of calcium and magnesium. Minimal lanthanide accumulation was detected in plant tissues, with most retained in the root zone, highlighting their limited mobility. These findings suggest that lanthanides can be safely and effectively used for phosphorus recovery and agricultural reuse, contributing to sustainable nutrient cycling and aligning with the United Nations’ Sustainable Development Goals of zero hunger and sustainable cities. Full article
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16 pages, 5637 KiB  
Article
Optimizing High-Al2O3 Limonite Pellet Performance: The Critical Role of Basicity in Consolidation and Reduction
by Yufeng Guo, Yixi Zhang, Feng Chen, Shuai Wang, Lingzhi Yang, Yanqin Xie and Xinyao Xia
Metals 2025, 15(7), 801; https://doi.org/10.3390/met15070801 - 16 Jul 2025
Viewed by 264
Abstract
With the gradual depletion of high-quality iron ore resources, global steel enterprises have shifted their focus to low-grade, high-impurity iron ores. Using low-grade iron ore to produce pellets for blast furnaces is crucial for companies to control production costs and diversify raw material [...] Read more.
With the gradual depletion of high-quality iron ore resources, global steel enterprises have shifted their focus to low-grade, high-impurity iron ores. Using low-grade iron ore to produce pellets for blast furnaces is crucial for companies to control production costs and diversify raw material sources. However, producing qualified pellets from limonite and other low-grade iron ores remains highly challenging. This study investigates the mechanism by which basicity affects the consolidation and reduction behavior of high-Al2O3 limonite pellets from a thermodynamic perspective. As the binary basicity of the pellets increased from 0.01 under natural conditions to 1.2, the compressive strength of the roasted pellets increased from 1100 N/P to 5200 N/P. The enhancement in basicity led to an increase in the amount of low-melting-point calcium ferrite in the binding phase, which increased the liquid phase in the pellets, thereby strengthening the consolidation. CaO infiltrated into large-sized iron particles and reacted with Al and Si elements, segregating the contiguous large-sized iron particles and encapsulating them with liquid-phase calcium ferrite. Calcium oxide reacts with the Al and Si elements in large hematite particles, segmenting them and forming liquid calcium ferrite that encapsulates the particles. Additionally, this study used thermodynamic analysis to characterize the influence of CaO on aluminum elements in high-aluminum iron ore pellets. Adding CaO boosted the liquid phase’s ability to incorporate aluminum, lessening the inhibition by high-melting-point aluminum elements of hematite recrystallization. During the reduction process, pellets with high basicity exhibited superior reduction performance. Full article
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13 pages, 2375 KiB  
Communication
Research on the Effect of Calcium Alginate-Red Mud Microspheres on the Performance of Cement Mortar by Partially Replacing Standard Sand
by Ruizhuo Liu, Zibo Lin, Shencheng Fan, Yao Cheng, Yuanyang Li, Jinsheng Li, Haiying Zou, Yongsi Chen, Liting Zheng and Jing Li
Materials 2025, 18(14), 3326; https://doi.org/10.3390/ma18143326 - 15 Jul 2025
Viewed by 281
Abstract
With the depletion of river sand resources and increasing environmental concerns, the development of alternative materials has become an urgent need in the construction industry. Waste concrete and non-waste concrete materials have been widely studied as alternatives to river sand. Although recycled concrete [...] Read more.
With the depletion of river sand resources and increasing environmental concerns, the development of alternative materials has become an urgent need in the construction industry. Waste concrete and non-waste concrete materials have been widely studied as alternatives to river sand. Although recycled concrete fine aggregates are close to natural sand in terms of mechanical properties, their surface cement adheres and affects the performance of cement, whereas non-recycled concrete fine aggregates perform superiorly in terms of ease of use and compressive properties, but there are challenges of supply stability and standardization. Red mud, as an industrial waste, is a potential alternative material due to its stable supply and high alkaline characteristics. In this paper, a new method is proposed for utilizing the cross-linking reaction between sodium alginate and calcium chloride by the calcium alginate-red mud microsphere preparation technique and the surface modification of red mud to enhance its bonding with cement. The experimental results showed that the mechanical properties of CMC-RM-SiO2-2.5% were improved by 13.9% compared with those of the benchmark cement mortar, and the encapsulation of red mud by calcium alginate significantly reduced the transfer of hazardous elements in red mud. Full article
(This article belongs to the Section Construction and Building Materials)
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26 pages, 1929 KiB  
Review
Calcium Route in the Plant and Blossom-End Rot Incidence
by Md. Yamin Kabir and Juan Carlos Díaz-Pérez
Horticulturae 2025, 11(7), 807; https://doi.org/10.3390/horticulturae11070807 - 8 Jul 2025
Viewed by 610
Abstract
Calcium (Ca2+) is a macronutrient essential for the growth, development, yield, and quality of vegetables and fruits. It performs structural, enzymatic, and signaling functions in plants. This review examines Ca2+ translocation from soil to the fruit via the plant xylem [...] Read more.
Calcium (Ca2+) is a macronutrient essential for the growth, development, yield, and quality of vegetables and fruits. It performs structural, enzymatic, and signaling functions in plants. This review examines Ca2+ translocation from soil to the fruit via the plant xylem network, emphasizing the importance of Ca2+ compartmentalization within fruit cell organelles in the development of calcium deficiency disorders such as blossom-end rot (BER). The underlying causes of BER and potential control measures are also discussed. Soil-available Ca2+, transported by water flow, enters the root apoplast through membrane channels and moves toward the xylem via apoplastic or symplastic routes. The transpiration force and the growth of organs determine the movement of Ca2+-containing xylem sap to aerial plant parts, including fruits. At the fruit level, the final step of Ca2+ regulation is intracellular partitioning among organelles and cellular compartments. This distribution ultimately determines the fruit’s susceptibility to Ca2+-deficiency disorders such as BER. Excessive sequestration of Ca2+ into organelles such as vacuoles may deplete cytosolic and apoplastic Ca2+ pools, compromising membrane integrity and leading to BER, even when overall Ca2+ levels are adequate at the blossom end. Effective BER management requires cultural and physiological practices that promote Ca2+ uptake, translocation to the fruit, and appropriate intracellular distribution. Additionally, the use of BER-resistant and Ca2+-efficient cultivars can help mitigate this disorder. Therefore, a comprehensive understanding of Ca2+ dynamics in plants is critical for managing BER, minimizing production loss and environmental impacts, and maximizing overall crop productivity. Full article
(This article belongs to the Special Issue New Insights into Stress Tolerance of Horticultural Crops)
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24 pages, 2919 KiB  
Article
The Identification of Proteolytic Substrates of Calpain-5 with N-Terminomics
by Jozsef Gal, Antoine Dufour, Daniel Young, Eddy S. Yang and James W. Geddes
Int. J. Mol. Sci. 2025, 26(13), 6459; https://doi.org/10.3390/ijms26136459 - 4 Jul 2025
Viewed by 357
Abstract
Calpain-5/CAPN5 is a calcium-activated, non-lysosomal cysteine (thiol) protease. The substrate repertoire of CAPN5 is not known. Calpains catalyze limited proteolysis of their substrates, generating neo-N-termini that correspond to internal residues of their nascent substrate proteins. To identify such neo-N-termini generated by CAPN5, we [...] Read more.
Calpain-5/CAPN5 is a calcium-activated, non-lysosomal cysteine (thiol) protease. The substrate repertoire of CAPN5 is not known. Calpains catalyze limited proteolysis of their substrates, generating neo-N-termini that correspond to internal residues of their nascent substrate proteins. To identify such neo-N-termini generated by CAPN5, we employed an N-terminomics approach called TAILS (Terminal amine isotopic labeling of substrates) to quantitatively compare the N-terminal peptides detected in parental and CAPN5-deficient SH-SY5Y neuroblastoma cells. Thirty neo-N-termini corresponding to 29 protein groups and 24 unique proteins were detected to be depleted in the CAPN5−/− cells. A subset of the identified putative substrates was further studied with CAPN5 co-immunoprecipitation, in vitro calcium-induced CAPN5 proteolysis assay, and their cellular fragmentation patterns were compared in parental and CAPN5-deficient SH-SY5Y cells. Here, we provide evidence for CAPN5-mediated proteolysis of the synaptic proteins DLGAP4, IQSEC1 and MPDZ, the neurodegeneration-related EWS, hnRNPU, TFG and UGP2, the DNA replication regulator MCM3, and the neuronal differentiation regulator LMTK1. Our data provide new relevance for neovascular inflammatory vitreoretinopathy (NIV), a progressive eye disease caused by pathogenic mutations in CAPN5. Data are available via ProteomeXchange with identifier PXD064313. Full article
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28 pages, 11235 KiB  
Article
Petrogenesis, Tectonic Setting, and Metallogenic Constraints of Tin-Bearing Plutons in the Karamaili Granite Belt of Eastern Junggar, Xinjiang (NW China)
by Shuai Yuan, Qiwei Wang, Bowen Zhang, Xiaoping Gong and Chunmei Su
Minerals 2025, 15(7), 710; https://doi.org/10.3390/min15070710 - 3 Jul 2025
Viewed by 591
Abstract
The Karamaili Granite Belt (KGB) in the southern margin of the Eastern Junggar is the most important tin metallogenic belt in the southwestern Central Asian Orogenic Belt. The plutons in the western part have a close genetic relationship with tin mineralization. The zircon [...] Read more.
The Karamaili Granite Belt (KGB) in the southern margin of the Eastern Junggar is the most important tin metallogenic belt in the southwestern Central Asian Orogenic Belt. The plutons in the western part have a close genetic relationship with tin mineralization. The zircon U-Pb ages of the Kamusite, Laoyaquan, and Beilekuduke plutons are 315.1 ± 3.4 Ma, 313.6 ± 2.9 Ma, and 316.5 ± 4.6 Ma, respectively. The plutons have high silica (SiO2 = 75.53%–77.85%), potassium (K2O = 4.43%–5.42%), and alkalis (K2O + Na2O = 8.17%–8.90%) contents and low ferroan (Fe2O3T = 0.90%–1.48%), calcium, and magnesium contents and are classified as metaluminous–peraluminous, high-potassium, calc-alkaline iron granite. The rocks are enriched in Rb, Th, U, K, Pb, and Sn and strongly depleted in Ba, Sr, P, Eu, and Ti. They have strongly negative Eu anomalies (δEu = 0.01–0.05), 10,000 Ga/Al = 2.87–4.91 (>2.6), showing the geochemical characteristics of A-type granite. The zircon U/Pb ratios indicate that the above granites should be I- or A-type granite, which is generally formed under high-temperature (768–843 °C), low-pressure, and reducing magma conditions. The high Rb/Sr ratio (a mean of 48 > 1.2) and low K/Rb ratio (53.93–169.94) indicate that the tin-bearing plutons have undergone high differentiation. The positive whole-rock εNd(t) values (3.99–5.54) and the relatively young Nd T2DM model ages (616–455 Ma) suggest the magma is derived from partially melted juvenile crust, and the underplating of basic magma containing mantle materials that affected the source area. The results indicate the KGB was formed in the tectonic transition period in the late Carboniferous subduction post-collision environment. Orogenic compression influenced the tin-bearing plutons in the western part of the KGB, forming highly differentiated and reduced I, A-type transition granite. An extensional environment affected the plutons in the eastern sections, creating A-type granite with dark enclaves that suggest magma mixing with little evidence of tin mineralization. Full article
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15 pages, 2522 KiB  
Review
Regulation of L-Lactate in Glutamate Excitotoxicity Under Cerebral Ischemia: Pathophysiology and Preventive Strategy
by Mao Zhang, Yanyan Wang, Zili Gong, Wen Jiang, Guodong Ge and Hong Guo
Pharmaceuticals 2025, 18(7), 935; https://doi.org/10.3390/ph18070935 - 20 Jun 2025
Viewed by 535
Abstract
Glutamate is an excitatory neurotransmitter in the central nervous system (CNS) that mediates synaptic transmission. However, glutamate homeostasis among neural cells is broken in cerebral ischemia. Excessive glutamate triggers N-methyl-d-aspartate receptors (NMDARs) in postsynaptic neurons, leading to intracellular calcium (Ca [...] Read more.
Glutamate is an excitatory neurotransmitter in the central nervous system (CNS) that mediates synaptic transmission. However, glutamate homeostasis among neural cells is broken in cerebral ischemia. Excessive glutamate triggers N-methyl-d-aspartate receptors (NMDARs) in postsynaptic neurons, leading to intracellular calcium (Ca2+) overload and excitoneurotoxicity. At this moment, L-lactate may affect NMDARs and play a protective role in cerebral ischemia. This work proposes that L-lactate regulates glutamate signaling among neural cells. But, dysregulation of L-lactate in glutamate signaling cascades contributes to glutamate excitotoxicity in cerebral ischemia. In detail, L-lactate regulates the glutamine(Gln)-glutamate cycle between astrocytes and presynaptic neurons, which triggers the astroglial L-lactate-sensitive receptor (LLR)-cyclic adenosine monophosphate (cAMP)/protein kinase A (PKA) pathway, coordinating astroglial glutamate uptake and neuronal glutamate transmission. L-lactate mediates glutamate signaling and synaptic transmission among neural cells. In addition, L-lactate promotes the function of mitochondrial calcium uniporter complex (MCUC), which quickly depletes intracellular Ca2+ in postsynaptic neurons. In addition, L-lactate can promote the conversion of microglia from the pro-inflammatory (M1) to anti-inflammatory (M2) phenotype. Therefore, regulation of L-lactate in glutamate signaling in the CNS might become a preventive target for cerebral ischemia. Full article
(This article belongs to the Section Biopharmaceuticals)
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34 pages, 12770 KiB  
Article
Immiscibility in Magma Conduits: Evidence from Granitic Enclaves
by Ya Tian, Guanglai Li, Yongle Yang, Chao Huang, Yinqiu Hu, Kai Xu and Ji Zhang
Minerals 2025, 15(7), 664; https://doi.org/10.3390/min15070664 - 20 Jun 2025
Viewed by 317
Abstract
Many granitic enclaves are developed in the volcanic channel of the Xiangshan volcanic basin. To explore their genesis, this study examined the petrography, geochemistry, LA-ICP-MS zircon U–Pb chronology, and zircon Hf isotopes of the granitic enclaves and compared them with the porphyroclastic lavas. [...] Read more.
Many granitic enclaves are developed in the volcanic channel of the Xiangshan volcanic basin. To explore their genesis, this study examined the petrography, geochemistry, LA-ICP-MS zircon U–Pb chronology, and zircon Hf isotopes of the granitic enclaves and compared them with the porphyroclastic lavas. In general, the granitic enclaves and porphyroclastic lavas have similar structures, and the rock-forming minerals and accessory minerals have relatively close compositions. In terms of rock geochemical characteristics, the granitic enclaves are richer in silicon and alkalis but have lower abundances of aluminum, magnesium, iron, and calcium than the porphyroclastic lavas. Rb, Th, K, Sm, and other elements are more enriched, whereas Ba, Ti, Nb, P, and other elements are more depleted. The granitic enclaves have lower rare earth contents (195.53 × 10−6–271.06 × 10−6) than the porphyroclastic lavas (246.67 × 10−6–314.27 × 10−6). The rare earth element distribution curves of the two are generally consistent, both right-leaning, and enriched with light rare earth patterns. The weighted average zircon U–Pb ages of two granitic enclave samples were 135.45 ± 0.54 Ma (MSWD = 0.62, n = 17) and 135.81 ± 0.60 Ma (MSWD = 0.40, n = 20), respectively, which are consistent with the weighted average age of a single porphyroclastic lava sample of 134.01 ± 0.53 Ma (MSWD = 2.0, n = 20). The zircons of the two kinds of rocks crystallize at almost the same temperature. The consistent trend of the rare earth element distribution curve of zircons in the granitic enclaves and the porphyroclastic lava samples indicates that the zircons of the two samples were formed in the same stage. The formation process of granitic enclaves may be that the lower crustal melt is induced to rise, and the crystallization differentiation occurs in the magma reservoir and is stored in the form of crystal mush, forming a shallow crystal mush reservoir. The crystal mush reservoir is composed of a large number of rock-forming minerals such as quartz, feldspar, and biotite, as well as accessory mineral crystals such as zircon and flowable intergranular melt. In the later stage of magma high evolution, a small and short-time magmatic activity caused a large amount of crystalline granitic crystal mush to pour into the volcanic pipeline. In the closed system of volcanic pipeline, the pressure and temperature decreased rapidly, and the supercooling degree increased, and the immiscibility finally formed pale granitic enclaves. Full article
(This article belongs to the Section Mineral Geochemistry and Geochronology)
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13 pages, 3488 KiB  
Article
Interactions Between Morel Cultivation, Soil Microbes, and Mineral Nutrients: Impacts and Mechanisms
by Yiwen Fu, Muxin Fan, Haiyan Qin, Zeyu Zhang, Shijun Liu, Shuwen Wu, Yun Wang and Xia Yuan
J. Fungi 2025, 11(6), 405; https://doi.org/10.3390/jof11060405 - 24 May 2025
Viewed by 867
Abstract
Morel mushrooms (Morchella spp.) are prized for their nutritional and medicinal value. Despite extensive research on their cultivation, the species’ impacts on the soil microbiota and minerals remain unclear. This study systematically evaluated six Morchella species, analyzing their effects on soil physicochemical [...] Read more.
Morel mushrooms (Morchella spp.) are prized for their nutritional and medicinal value. Despite extensive research on their cultivation, the species’ impacts on the soil microbiota and minerals remain unclear. This study systematically evaluated six Morchella species, analyzing their effects on soil physicochemical properties, microbial communities, and mineral nutrients levels. The results showed that yield varied significantly among the species, with an order of M. sextelata > M. exuberans > M. eximia > M. importuna > Mel-13 > Mel-21. Cultivation led to a consistent reduction in soil NO3-N levels, particularly in M. eximia and Mel-13 (40–50% decrease), while NH4+-N levels did not change significantly, indicating mycelial nitrate preference. Mineral nutrient alterations exhibited distinct species-dependent patterns, with M. eximia showing the greatest increase in exchangeable Ca, while M. importuna and M. sextelata caused the most obvious decreases in available B. Morchella species exerted more pronounced impacts on fungal than bacterial communities, evidenced by significant reductions in alpha diversity—particularly in high-yield M. sextelata—suggesting species-specific fungal inhibition. At the phylum level, consistent depletion of Ascomycota but enrichment of Mortierellomycota were noted. Moreover, correlation analyses identified significant positive associations between morel yield and both fungal community diversity and exchangeable Ca content. This implies that Morchella species restructures soil fungal communities through nutrient competition and mineral-mediated regulation, with calcium acting as a key modulator. Overall, by elucidating the interconnected ‘Morchella species–microbe–mineral’ relationships, this study highlights Morchella species’ distinct regulation of soil microecology, providing valuable insights for the selection of optimized species like M. eximia and targeted soil management in morel cultivation. Full article
(This article belongs to the Special Issue Fungal Communities in Various Environments)
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16 pages, 6717 KiB  
Article
Ureolysis-Driven Microbially Induced Carbonate Precipitation by a Facultatively Anaerobic Thermophilic Bacterium Under High-Temperature and Anaerobic Conditions
by Xiulun Shen, Sijia He, Yutaro Takaya, Tomoyoshi Yakata, Kotaro Yoshida and Hajime Kobayashi
Microorganisms 2025, 13(5), 1102; https://doi.org/10.3390/microorganisms13051102 - 10 May 2025
Viewed by 615
Abstract
Microbially induced carbonate precipitation (MICP) is the precipitation of CaCO3 crystals, induced by microbial metabolic activities such as ureolysis. Various applications of MICP have been proposed as innovative biocementation techniques. This study aimed to verify the feasibility of ureolysis-driven MICP applications in [...] Read more.
Microbially induced carbonate precipitation (MICP) is the precipitation of CaCO3 crystals, induced by microbial metabolic activities such as ureolysis. Various applications of MICP have been proposed as innovative biocementation techniques. This study aimed to verify the feasibility of ureolysis-driven MICP applications in deep-subsurface environments (e.g., enhanced oil recovery and geological carbon sequestration). To this end, we screened sludge collected from a high-temperature anaerobic digester for facultatively anaerobic thermophilic bacteria possessing ureolytic activity. Then, we examined the ureolysis-driven MICP using a representative isolate, Bacillus haynesii strain SK1, under aerobic, anoxic, and strict anaerobic conditions at 30 °C, 40 °C, and 50 °C. All cultures showed ureolysis and the formation of insoluble precipitates. Fourier transform infrared spectroscopy analysis revealed precipitates comprising CaCO3 at 30 °C, 40 °C, and 50 °C under aerobic conditions but only at 50 °C under anoxic and strict anaerobic conditions, suggesting efficient MICP at 50 °C. Interestingly, an X-ray diffraction analysis indicated that calcium carbonate crystals that were produced under aerobic conditions were in the form of calcite, while those that were produced under anoxic and strict anaerobic conditions at 50 °C were mostly in the form of vaterite. Thus, we demonstrated ureolysis-driven MICP under high-temperature and O2-depletion conditions, suggesting the potential of MICP applications in deep-subsurface environments. Full article
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14 pages, 2385 KiB  
Article
CDC6 Inhibits CDK1 Activity in MII-Arrested Oocyte Cell-Free Extract
by Louis Dillac, Klaudia Porębska, Malgorzata Kloc, Rafal P. Piprek, Jean-Pierre Tassan and Jacek Z. Kubiak
Int. J. Mol. Sci. 2025, 26(9), 4309; https://doi.org/10.3390/ijms26094309 - 1 May 2025
Viewed by 683
Abstract
The control of cyclin-dependent kinase 1 (CDK1) kinase activity is crucial for cell cycle progression. Cell division cycle 6 (CDC6) inhibits this activity in embryonic mitoses, and thus regulates the timing of cell division progression. The meiotic cell cycle differs greatly from the [...] Read more.
The control of cyclin-dependent kinase 1 (CDK1) kinase activity is crucial for cell cycle progression. Cell division cycle 6 (CDC6) inhibits this activity in embryonic mitoses, and thus regulates the timing of cell division progression. The meiotic cell cycle differs greatly from the mitotic one. Metaphase II (MII)-arrested oocytes remain in prolonged M-phase state due to the high activity of CDK1 in the presence of CytoStatic Factor (CSF). The role of CDC6 in the control of CDK1 during MII and oocyte activation remains unknown. Here, we studied the role of CDC6/CDK1 interactions in Xenopus laevis cell-free extracts arrested in MII (CSF extract) and upon calcium activation leading to meiotic-to-mitotic transition. The CSF extract allows analysis of biochemical processes based on immunodepletion of selected proteins and facilitates manipulations using addition of recombinant proteins. We show by glutathione S-transferase (GST)-CDC6 pull-down that CDC6 associates with CDK1 in CSF extract and by histone H1 kinase assay that it downregulates CDK1 activity. Thus, CDC6-dependent inhibition of CDK1 is involved in the homeostasis of the MII-arrest. Upon CSF extract activation with calcium exogenous GST-CDC6 provokes accelerated transition from MII to interphase, while the depletion of endogenous CDC6 results in a slower transition to interphase. We demonstrate this by following both the phosphorylation state of CDK1 substrate cell division cycle 27 (CDC27) and histone H1 kinase assay. Importantly, increasing doses of GST-CDC6 proportionally accelerate CDK1 inactivation showing that CDC6 controls the dynamics of MII to interphase transition in a dose-dependent manner. Thus, CDC6 is a CDK1 silencer acting upon both the MII arrest and CSF extract activation by assuring the physiological activity of CDK1 during this meiotic arrest and correct timely inactivation of this kinase during the second process. Thus, we show that CDC6 controls CDK1 not only during mitotic divisions, but also in MII-arrest and the meiotic-to-mitotic transition in Xenopus laevis cell-free extracts. This study aims to bridge that gap by investigating CDC6 function using a biochemically controlled system. Full article
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24 pages, 4332 KiB  
Article
Chemical Realkalization of Carbonated Concrete: Influence of Cement Composition on Alkalinity Restoration and Portlandite Formation
by Giovana Costa Réus, Renan Pícolo Salvador, Juarez Hoppe Filho, Diego Jesus De Souza and Marcelo H. F. de Medeiros
Buildings 2025, 15(8), 1318; https://doi.org/10.3390/buildings15081318 - 16 Apr 2025
Viewed by 597
Abstract
This study examines the carbonation and realkalization dynamics of various cementitious systems, with a focus on the influence of cement composition on their susceptibility to carbonation and potential for realkalization. Four cement types were evaluated: CEM I, CEM II/A-LL, CEM II/A-V, and CEM [...] Read more.
This study examines the carbonation and realkalization dynamics of various cementitious systems, with a focus on the influence of cement composition on their susceptibility to carbonation and potential for realkalization. Four cement types were evaluated: CEM I, CEM II/A-LL, CEM II/A-V, and CEM II/B-W. Carbonation depth measurements revealed that blended cements, particularly CEM II/A-LL, showed greater carbonation susceptibility due to their lower portlandite content and increased porosity. In contrast, realkalization experiments demonstrated that blended cements exhibited enhanced ionic transport, resulting in deeper penetration of the alkaline solution. CEM II/A-V showed the highest realkalization depth, while CEM I displayed the lowest, highlighting the role of microstructural characteristics in realkalization efficiency. Thermogravimetric analysis (TGA) and X-ray diffraction (XRD) confirmed that carbonation led to portlandite depletion and the formation of calcium carbonate, with limited portlandite regeneration upon realkalization. Thermodynamic simulations further supported the experimental findings, revealing that realkalization only partially restored alkalinity, with no significant dissolution of carbonation products. These results emphasize the need for tailored realkalization strategies, considering cement composition and pore structure, to optimize remediation efforts and enhance the long-term durability of concrete structures. Full article
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15 pages, 1151 KiB  
Article
The Influence of Different Light Day Distribution in Hy-Line W36 Laying Hens on Egg Production and Egg Quality
by Alexis J. Clark, Ari J. Bragg, Abdulmohsen Hussen Alqhtani, Mireille Arguelles-Ramos and Ahmed Ali
Animals 2025, 15(6), 838; https://doi.org/10.3390/ani15060838 - 14 Mar 2025
Viewed by 584
Abstract
Laying hens are commonly provided with 16 h of continuous light and 8 h of continuous darkness, with eggshell calcification largely developing during dark hours when dietary calcium is depleted simultaneously with the daily fasting period in laying hens. This phenomenon is thought [...] Read more.
Laying hens are commonly provided with 16 h of continuous light and 8 h of continuous darkness, with eggshell calcification largely developing during dark hours when dietary calcium is depleted simultaneously with the daily fasting period in laying hens. This phenomenon is thought to be the leading cause of osteoporosis in modern commercial flocks. This trial examined how disrupting the midnight phase affected egg quality in Hy-line W36 hens assigned to control (C) or treatment groups (W1 or W2) from 20 to 70 weeks of age. C hens received 16 h of light and 8 h of dark. W1 hens received 1 h of scotophase interruption, whereas W2 hens received 2 h of scotophase interruption. Across weeks, performance, production, and egg quality measures were measured (p < 0.05). Scotophase interruption displayed a positive effect on the treatment groups in terms of HDEP (week 50: p = 0.028, 0.016; week 70 = 0.031,0.022), damaged eggs (week 50: p = 0.012, 0.021, week 70: p = 0.019, 0.025), eggshell weight (week 30: p = 0.021, 0.027; week 50: p = 0.022, 0.024; week 70; p = 0.018, 0.019), eggshell thickness (week 30: p = 0.017, 0.022; week 50: p = 0.018, 0.031; week 70; p = 0.029, 0.033), ash percent week 30: p = 0.027, 0.021; week 50: p = 0.012, 0.014; week 70; p = 0.031, 0.034), and eggshell strength (week 30: p = 0.025, 0.023; week 50: p = 0.019, 0.021; week 70; p = 0.029, 0.015) in W1 and W2 birds compared to C birds. Full article
(This article belongs to the Section Poultry)
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20 pages, 1691 KiB  
Article
Identification of Novel Genetic Variants and Food Intake Factors Associated with Type 2 Diabetes in South Korean Adults, Using an Illness–Death Model
by Jeongmin Oh, Junho Cha and Sungkyoung Choi
Int. J. Mol. Sci. 2025, 26(6), 2597; https://doi.org/10.3390/ijms26062597 - 13 Mar 2025
Cited by 1 | Viewed by 1000
Abstract
Type 2 diabetes (T2D) is a prevalent chronic disease in the Korean population, influenced by lifestyle, dietary habits, and genetics. This study aimed to identify the effects of food intake and genetic factors on T2D progression in Korean adults using a multi-state illness-death [...] Read more.
Type 2 diabetes (T2D) is a prevalent chronic disease in the Korean population, influenced by lifestyle, dietary habits, and genetics. This study aimed to identify the effects of food intake and genetic factors on T2D progression in Korean adults using a multi-state illness-death model. We analyzed three transition models: normal glucose tolerance (NGT) to prediabetes (PD), NGT to T2D, and PD to T2D. We first identified dietary patterns significantly associated with each transition, using multivariate Cox proportional hazards models. Then, we assessed the impact of single-nucleotide polymorphisms (SNPs) on each transition, incorporating these dietary patterns as covariates. Our analysis revealed significant associations between the identified dietary patterns and the risk of PD and T2D incidence among individuals with NGT. We also identified novel genetic variants associated with disease progression: two SNPs (rs4607517 in Glucokinase [GCK] and rs758982 in Calcium/Calmodulin-Dependent Protein Kinase II Beta [CAMK2B]) in the NGT to PD model, and eight SNPs in the NGT to T2D model, including variants in the Zinc Finger Protein 106 (ZNF106), PTOV1 Extended AT-Hook Containing Adaptor Protein (PTOV1), Proprotein Convertase Subtilisin/Kexin Type 2 (PCSK2), Forkhead Box D2 (FOXD2), Solute Carrier Family 38 Member 7 (SLC38A7), and Neuronal Growth Regulator 1 (NEGR1) genes. Functional annotation analysis using ANNOVAR revealed that rs4607517 (GCK) and rs59595912 (PTOV1) exhibited high Combined Annotation-Dependent Depletion (CADD) and Deleterious Annotation of Genetic Variants using Neural Networks (DANN) scores, suggesting potential pathogenicity and providing a functional basis for their association with T2D progression. Integrating dietary and genetic factors with a multi-state model, this comprehensive approach offers valuable insights into T2D development and highlights potential targets for prevention and personalized interventions. Full article
(This article belongs to the Special Issue Genes and Human Diseases 2.0)
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