Search Results (258)

The premature senescence of red raspberry leaves severely affects plant growth. In this study, the double-season red raspberry cultivar ‘Polka’ was used, with N₁₅₀ (0.10 g N·kg⁻¹) selected as the treatment group (T150) and N₀ (0 g N·kg⁻¹) set as the control (CK). This study systematically investigated the mechanism of premature senescence in red raspberry leaves under different nitrogen application levels by measuring physiological parameters and conducting a combined multi-omics analysis of transcriptomics and metabolomics. Results showed that T150 plants had 8.34 cm greater height and 1.45 cm greater ground diameter than CK. The chlorophyll, carotenoid, soluble protein, and sugar contents in all leaf parts of T150 were significantly higher than those in CK, whereas soluble starch contents were lower. Malondialdehyde (MDA) content and superoxide anion (O₂⁻) generation rate in the lower leaves of T150 were significantly lower than those in CK. Superoxide sismutase (SOD) and peroxidase (POD) activities in the middle and lower functional leaves of T150 were higher than in CK, while catalase (CAT) activity was lower. Transcriptomic analysis identified 4350 significantly differentially expressed genes, including 2062 upregulated and 2288 downregulated genes. Metabolomic analysis identified 135 differential metabolites, out of which 60 were upregulated and 75 were downregulated. Integrated transcriptomic and metabolomic analysis showed enrichment in the phenylpropanoid biosynthesis (ko00940) and flavonoid biosynthesis (ko00941) pathways, with the former acting as an upstream pathway of the latter. A premature senescence pathway was established, and two key metabolites were identified: chlorogenic acid content decreased, and naringenin chalcone content increased in early senescent leaves, suggesting their pivotal roles in the early senescence of red raspberry leaves. Modulating chlorogenic acid and naringenin chalcone levels could delay premature senescence. Optimizing fertilization strategies may thus reduce senescence risk and enhance the productivity, profitability, and sustainability of the red raspberry industry. Full article

Cold storage is widely used for the postharvest preservation of fruits and vegetables; however, okra, as a tropical vegetable, is susceptible to chilling injury under low-temperature storage conditions, leading to quality deterioration, reduced nutritional value, and significant economic losses. Nitric oxide (NO), as an important signaling molecule, plays a crucial role in the postharvest preservation of fruits and vegetables. To investigate the effects of different concentrations of nitric oxide on the postharvest quality of okra under cold storage, fresh okra pods were treated with sodium nitroprusside (SNP), a commonly used NO donor, at concentrations of 0 (control), 0.5 (T1), 1.0 (T2), 1.5 (T3), and 2.0 mmol·L⁻¹ (T4). The results showed that low-concentration NO treatment (T1) significantly reduced weight loss, improved texture attributes including hardness, springiness, chewiness, resilience, and cohesiveness, and suppressed the increase in adhesiveness. T1 treatment also effectively inhibited excessive accumulation of cellulose and lignin, thereby maintaining tissue palatability and structural integrity. Additionally, T1 significantly delayed chlorophyll degradation, preserved higher levels of soluble sugars and proteins, and enhanced the activities of key antioxidant enzymes, including superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT), contributing to improved oxidative stress resistance and membrane stability. In contrast, high-concentration NO treatments (T3 and T4) led to pronounced quality deterioration, characterized by accelerated membrane lipid peroxidation as evidenced by increased malondialdehyde (MDA) content and relative conductivity, and impaired antioxidant defense, resulting in rapid texture degradation, chlorophyll loss, nutrient depletion, and oxidative damage. These findings provide theoretical insights and practical guidance for the precise application of NO in extending shelf life and maintaining the postharvest quality of okra fruits. Full article

This research evaluated the recovery and reuse of dolomitic calcareous amendment saturated with nutrients adsorbed from hydroponic effluent as a soil improver and its impact on the agronomic performance of Phaseolus vulgaris. Initially, the dolomitic calcareous amendment (DCA) was saturated with nutrients from the hydroponic effluent through adsorption tests. The characterization of the DCA was conducted before and after nutrient saturation to verify its composition. Soil analysis was carried out prior to the trial, and a completely randomized experimental design was applied with four treatments and five replications, totaling 20 experimental units for each soil type (sandy and clayey): T1 (control), T2 (raw dolomitic calcareous amendment—DCA), T3 (saturated dolomitic calcareous amendment—DCAS), and T4 (granulated dolomitic calcareous amendment—DCAG). Agronomic performance parameters of Phaseolus vulgaris were assessed to determine nutrient availability to the plant: number of pods, pod length (cm), number of seeds per pod, and weight of 100 seeds (g). Data normality was verified using the Shapiro–Wilk test, and results were analyzed using ANOVA and mean comparisons through Tukey’s test (p < 0.05) using InfoStat software 2020I. Additionally, plant tissue was analyzed to determine nutrient absorption in the seeds, and both soil types were analyzed after harvest. Adsorption results indicated that the DCA retained phosphorus, manganese, calcium, and zinc. According to the characterization, DCA primarily consisted of calcium and magnesium carbonates; following the saturation process, an increase in carbonate groups was observed due to calcium adsorption from the hydroponic effluent. Results in both soil types showed no significant differences in pod number, pod length, or seeds per pod, except for the weight of 100 seeds in sandy soil, where T1, T2, and T3 differed significantly from T4. Based on references, the phosphorus content in the harvested seeds from T3 in sandy soil is classified as sufficient. The findings demonstrate the potential of recovering and reusing nutrients from hydroponic effluent using DCA and transforming it into a value-added agricultural input for soil improvement, presenting a promising alternative for more sustainable and efficient agriculture. Full article

The Fabaceae family, the third-largest among flowering plants, is nutritionally vital, providing rich sources of protein, dietary fiber, vitamins, and minerals. Leguminous plants, such as soybeans, peas, and chickpeas, typically contain two to three times more protein than cereals like wheat and rice, with low fat content (primarily unsaturated fats) and no cholesterol, making them essential for cardiovascular health and blood sugar management. Since the release of the soybean genome in 2010, genomic research in Fabaceae has advanced dramatically. High-quality reference genomes have been assembled for key species, including soybeans (Glycine max), common beans (Phaseolus vulgaris), chickpeas (Cicer arietinum), and model legumes like Medicago truncatula and Lotus japonicus, leveraging long-read sequencing, single-cell technologies, and improved assembly algorithms. These advancements have enabled telomere-to-telomere (T2T) assemblies, pan-genome constructions, and the identification of structural variants (SVs) and presence/absence variations (PAVs), enriching our understanding of genetic diversity and domestication history. Functional genomic tools, such as CRISPR-Cas9 gene editing, mutagenesis, and high-throughput omics (transcriptomics, metabolomics), have elucidated regulatory networks controlling critical traits like photoperiod sensitivity (e.g., E1 and Tof16 genes in soybeans), seed development (GmSWEET39 for oil/protein transport), nitrogen fixation efficiency, and stress resilience (e.g., Rpp3 for rust resistance). Genome-wide association studies (GWAS) and comparative genomics have further linked genetic variants to agronomic traits, such as pod size in peanuts (PSW1) and flowering time in common beans (COL2). This review synthesizes recent breakthroughs in legume genomics, highlighting the integration of multi-omic approaches to accelerate gene cloning and functional confirmation of the genes cloned. Full article

This study investigated the effects of Trichoderma harzianum inoculation on the growth, physiological responses, and soil nutrient uptake of three turfgrass species cultivated on eco-concrete—Axonopus compressus (Sw.) Beauv., Cynodon dactylon (L.) Pers., and Zoysia sinica Hance. A 2 × 2 factorial design was used to evaluate plant growth, physiological responses, and soil metrics under cement stress, incorporating T. harzianum inoculation (inoculated vs. control) and substrate composition (eco-concrete vs. pastoral soil). Our results indicate that inoculation with Trichoderma harzianum significantly enhanced the growth potential of the three turfgrass species compared to uninoculated controls. Furthermore, under cement stress conditions in vegetated concrete, inoculation with T. harzianum significantly alleviated the inhibition of growth and development. More specifically, in the vegetated concrete habitat, inoculated plants exhibited significantly increased root length and surface area. This enhancement promoted the uptake of available nitrogen (AN), available phosphorus (AP), and available potassium (AK) from the soil. Concurrently, inoculated plants showed higher leaf epidermal cell density, stomatal width, soluble sugar content, and antioxidant enzyme activity (SOD, POD, CAT, and APX). Additionally, significant reductions were observed in root activity, relative conductivity, and malondialdehyde (MDA) and proline contents. In conclusion, T. harzianum inoculation promotes the growth of the three turfgrass species under cement stress, likely by enhancing root development, increasing osmoregulatory substance accumulation, and elevating antioxidant enzyme activities. Full article

Extreme weather events such as heavy rainfall significantly reduce surface salinity in coastal waters, presenting considerable challenges to the aquaculture of Japanese scallops (Mizuhopecten yessoensis) in shallow cage systems. This study investigated the effects of chronic low-salinity stress on the growth performance, antioxidant capacity, and gene expression profile of M. yessoensis using a 60-day salinity gradient experiment. S33 represents the control treatment with normal seawater salinity (33‰), while S30, S28, and S26 represent experimental groups with progressively lower salinities of 30‰, 28‰, and 26‰, respectively. A decline in salinity was accompanied by an increase in oxygen consumption. The S26 group exhibited a higher ammonia excretion rate (2.73 μg/g·h) than other groups, indicating intensified nitrogen metabolism. Growth was inhibited under low-salinity conditions. The S33 group exhibited greater weight gain (16.7%) and shell growth (8.4%) compared to the S26 group (11.6% and 6%), which also showed a substantially higher mortality rate (46%) compared to the control (13%). At 28‰, antioxidant enzyme activities (T-AOC, SOD, CAT, POD) were elevated, indicating a moderate level of stress. However, at the lowest salinity (26‰), these indicators decreased, reflecting the exhaustion of the antioxidant systems and indicating that the mollusks’ adaptive capacity had been exceeded, leading to a state of stress fatigue. NAD-MDH activity was elevated in the S26 group, reflecting enhanced aerobic metabolism under stress. Transcriptome analysis revealed 564 differentially expressed genes (DEGs) between the S33 and S26 groups. Functional enrichment analysis indicated that these DEGs were mainly associated with immune and stress response pathways, including NF-κB, TNF, apoptosis, and Toll/Imd signaling. These genes are involved in key metabolic processes, such as alanine, aspartate, and glutamate metabolism. Genes such as GADD45, ATF4, TRAF3, and XBP1 were upregulated, contributing to stress repair and antioxidant responses. Conversely, the expressions of CASP3, IKBKA, BIRC2/3, and LBP were downregulated, potentially mitigating apoptosis and inflammatory responses. These findings suggest that M. yessoensis adapts to chronic low-salinity stress through the activation of antioxidant systems, modulation of immune responses, and suppression of excessive apoptosis. This study provides new insights into the molecular mechanisms underlying salinity adaptation in bivalves and offers valuable references for scallop aquaculture and selective breeding programs. Full article

Thrips flavus (Thysanoptera: Thripidae) is a Eurasian pest that primarily attacks a variety of cash crops such as soybean. Currently, there is insufficient knowledge of thrips-resistance mechanisms in soybeans and a lack of effective thrips-resistant soybean varieties. The objective of this study was to identify the correlation between the pest thrips, T. flavus, resistance levels and morphological structures of soybean varieties. A total of 41 spring soybean varieties were planted in a field in Northeast China. Observations were made regarding the infestation intensity of T. flavus, the morphological structures (compound leaf shape, leaf length, leaf width, leaf surface humidity, trichome density, length, and color), leaf SPAD value, leaf nitrogen content, etc. Specifically, leaf trichome density (regardless of whether it was on the upper or lower surfaces of the upper, middle, or lower leaves), trichome color, and compound leaf shape all showed significant positive correlations with the amount of T. flavus. Additionally, principal component analysis (PCA) indicated that, during the peak flowering stage, leaf width, trichome length, trichome density, SPAD value, and nitrogen content were key factors for evaluating resistance; meanwhile, during the podding stage, leaf length, SPAD value, nitrogen content, and leaf surface humidity made the most significant contributions. Field resistance screening using the number of T. flavus per meter of double rows, the average number of T. flavus per plant, and hierarchical cluster analysis yielded consistent results. The soybean variety “podless-trichome” is a thrips-resistant variety (high resistance), and “Jinong 29” is a thrips-sensitive variety (high sensitivity). This study provides valuable insights into the occurrence of insect resistance to thrips in soybean varieties. Full article

(1) Background: The larvae of Dioryctria sylvestrella typically bore into the shoots and cones of Pinus koraiensis, increasing tree breakage risk and reducing cone yield. (2) Methods: Five Beauveria bassiana strains were evaluated for virulence against fourth-instar larvae. And the levels of T-AOC and MDA in the larvae infected by each strain were measured. To assess larval responses to different strains, we measured the activities of six enzymes (SOD, CAT, POD, PPO, CarE, GST) and the levels of GSH and H₂O₂ in larvae treated with each strain. Additionally, the infection process of highly pathogenic B. bassiana in larvae was explored using scanning electron microscopy (SEM). (3) Results: Strain CGMCC3.2055 demonstrated the highest toxicity to larvae, achieving a cumulative corrected mortality of 80.56% on the 4th day and an LT₅₀ of 3.248 days. The T-AOC of larvae treated with strain CGMCC3.2055 was inhibited within 48 h. The relative MDA content in this group was significantly higher than that in other strain-treated groups at 6, 12, and 24 h. In Bb01-treated larvae, H₂O₂ accumulation at 6 and 24 h post-infection was influenced by POD activity rather than GSH levels; in BbZ1-treated larvae, the activities of CAT and POD were upregulated at 6 and 36 h, while the activity of SOD was downregulated, but the content of H₂O₂ increased significantly, resulting in accumulation; in CFCC81428-treated larvae, a decline in T-AOC coincided with substantial H₂O₂ accumulation over 48 h, while a concomitant increase in GSH content bolstered tolerance to lethal oxidative damage; in CGMCC3.2055-treated larvae, H₂O₂ only accumulated significantly at 24 and 48 h, yet upregulated CAT and POD were insufficient to effectively scavenge the excess H₂O₂; and in bio-21738-treated larvae, SOD-driven dismutation generated substantial H₂O₂ from 12 to 48 h, leading to pronounced accumulation from 6 to 48 h, yet limited upregulation of POD (only at 6 and 12 h) and CAT (only at 12 and 48 h) were insufficient to mitigate H₂O₂ buildup. PPO activity was upregulated within 48 h in all treatment groups except for BbZ1, where no upregulation was observed at 12 and 48 h. GST activity was upregulated in all treatment groups except for CGMCC3.2055, where a downregulation was observed at 12 h post-infection. CarE activity was significantly upregulated within 48 h in both CFCC81428 and CGMCC3.2055 groups; in the Bb01 group, CarE was upregulated only at 6 and 48 h; in the BbZ1 group, CarE was downregulated only at 48 h; and in the bio-21738 group, CarE showed no upregulation at 24 and 48 h. Through SEM, the infection process of the strain CGMCC3.2055 on the surface of the larvae was further determined, which mainly included adhesion, the appearance of bud-like protrusions, the growth of germ tubes along the epidermis and penetration of the epidermis, as well as the colonization of the strain and its emergence from the surface of the larvae. (4) Conclusions: This study first screened the highly pathogenic B. bassiana strain CGMCC3.2055 by evaluating its virulence to larvae and post-infection T-AOC and MDA levels. It also clarified the strain’s infection process and the larvae’s immune responses to various strains. Full article

The incorporation of Bacillus thuringiensis (Bt) rice straw into fields may influence the growth of subsequent crops, but its ecological risks for winter vegetables remain largely unreported. Investigating the effects of Bt rice straw extracts on the seed germination and plant growth of pakchoi (Brassica campestris L. ssp. Chinensis Makino var. communis Tsen et Lee) can provide a theoretical foundation for ecological risk assessments. In this study, straw extracts from non-Bt rice (Tianyouhuazhan), homozygous Bt rice (T775), and heterozygous Bt rice (F₁ of T775 hybrid) were used as experimental materials at concentrations of 10, 20, and 40 g·L⁻¹. Results showed that, compared to non-Bt extract, 40 g·L⁻¹ homozygous Bt extract increased seedling height and leaf peroxidase (POD) activity but inhibited catalase (CAT) and root superoxide dismutase (SOD) activities. The 20 g·L⁻¹ extract boosted root CAT activity yet suppressed leaf CAT and POD activities. The 10 g·L⁻¹ extract enhanced root length but reduced leaf CAT and POD activities. The 40 g·L⁻¹ heterozygous Bt extract increased leaf and root POD activity but inhibited germination rate and leaf SOD activity. The 10 g·L⁻¹ extract promoted root length and seedling POD activity but suppressed leaf POD activity. In plant growth assessments, the 10 g·L⁻¹ homozygous Bt extract reduced underground dry weight, and the 10 g·L⁻¹ heterozygous Bt extract inhibited both above and underground dry weight, while the 20 g·L⁻¹ heterozygous Bt extract increased aboveground dry weight. In conclusion, the effects of homozygous and heterozygous Bt rice straw extracts on pakchoi varied with concentration and physiological indices, showing no clear pattern. Optimizing straw return concentrations based on Bt rice variety differences is essential to mitigate ecological risks. Full article

This research explored the role of aflatoxin oxidase CotA in mitigating aflatoxin B₁ (AFB₁)-induced hepatotoxicity in Japanese quails. A total of 225 female Japanese quails, aged two weeks, were randomly assigned to three dietary groups: a control diet, an AFB₁-contaminated diet, and an AFB₁-contaminated diet supplemented with aflatoxin oxidase CotA for three weeks. The results indicate that quails receiving the AFB₁-contaminated diet exhibited reduced body weight gain, pronounced vacuolar degeneration within hepatocytes, and inflammatory cell infiltration. Additionally, the AFB₁ group demonstrated an increased liver index and elevated serum liver enzyme activities (ALT, AST, and ALP). Supplementation with CotA improved body weight gain and conferred protection against AFB₁-induced liver injury. Furthermore, the addition of CotA significantly enhanced liver antioxidant enzyme activities (T-AOC, GST, GSH-Px, POD, and CAT), reduced hepatic H₂O₂ and MDA levels, and upregulated the mRNA expression levels of genes in the Nrf2 pathway in quails exposed to AFB₁. AFB₁ exposure led to lipid droplet accumulation in liver tissues and elevated serum TG and LDL-C levels. However, the introduction of CotA mitigated AFB₁-induced alterations in lipid metabolism. Furthermore, dietary supplementation with CotA inhibited AFB₁-induced hepatocyte apoptosis and decreased the mRNA expression of apoptosis-related genes, including Bax, caspase-9, and caspase-3. Notably, the AFB₁+CotA group exhibited a significant reduction in AFB₁ residues and AFB₁-DNA adducts in quail liver tissues compared to the AFB₁ group. These findings indicate that aflatoxin oxidase CotA holds promise as a feed additive to alleviate AFB₁-induced hepatotoxicity. Full article

The Silvermines Pb-Zn-Ag-Ba orebodies comprise vein, replacement, cross-cutting and stratiform mineralization mostly hosted in Lower Carboniferous limestones in the vicinity of a major ENE and E-W trending normal fault array and represent a classic example of Irish-Type Zn-Pb mineralization. Historically the deposits have been exploited at various times, but the major limestone-hosted Zn-Pb-Ba mineralization was not discovered until the 1960s. Structurally controlled crosscutting vein and breccia mineralization represent pathways of hydrothermal fluids escaping from the Silvermines fault at depth that exhaled and replaced shallowly buried Waulsortian limestones creating the larger stratiform orebodies such as the Upper G and B-Zones. The B-Zone, comprising a pre-mining resource of 4.64 Mt of 4.53% Zn, 3.58% Pb, 30 g/t Ag has a locally highly variable host mineralogy dominated by pyrite, barite, siderite, within dolomitic and limestone breccias with local silica-haematite alteration. A small, highly unusual pod of very high-grade Ag-rich mineralization in the B-Zone, the 4611 Pod, discovered in 1978, has not been previously documented. Unpublished records, field notes, and mineralogical and chemical data from consultant reports have been assimilated to document this interesting and unusual occurrence. The pod, representing an irregular lens of mineralization ca 2 m thick and representing 500 t, occurs within the B-Zone orebody and comprises high grade Zn and Pb sulfides with significant patches of proustite-pyrargyrite (ruby silvers) and a host of associated Pb, Ag, Sb, As, Cu, Ge sulfide minerals, including significant argyrodite. Although evidence of any distinct feeder below the pod is lacking, the nature of the pod, its unusual mineralogy and its paragenesis suggests that it represents a small, possibly late source of exotic hydrothermal fluid where it entered the B-Zone stratiform mineralizing system. Full article

This study aimed to better understand the impacts of various nitrogen (N) forms on blueberry growth and development, as well as to increase blueberry (Vaccinium spp.) N utilization efficiency. We selected the blueberry cultivar ‘Anna’ as the experimental material, and four N treatments were applied throughout the key vegetative growth stage: N deficiency (CK), ammonium-N (T1), nitrate-N (T2), and amide-N (T3). The growth parameters, physiology indexes, and ultrastructure changes in blueberry seedlings were explored. At the same time, the Pearson correlation model was used to analyze the correlation among each physiology index. The results showed that blueberry plants grew better under T1 and T3 treatments, with increased biomass, N content, chlorophyll content, and photosynthetic efficiency. Under T1 treatment, the leaves had lower O₂^˙− generation rate and MDA concentration, but higher superoxide dismutase (SOD), glutamate synthetase (GOGAT), and glutamine synthetase (GS) activity. Compared to T1 treatment, T2 treatment dramatically enhanced peroxidase (POD) activity, glucose content, and free amino acid content, particularly Arg content. Furthermore, N deficit treatment inhibited plant growth while increasing free radicals, POD, catalase (CAT), and glutamate dehydrogenase (GDH) activities, as well as the content of antioxidant compounds. Correlation and principal component analysis showed that photosynthetic properties, chlorophyll content, antioxidant system, amino acid levels, and N metabolizing enzyme activity were significantly affected by different N forms. This study can serve as a scientific foundation for optimal N regulation and management in blueberries. Full article

Black spot is a major postharvest disease of cherry tomatoes, caused by Alternaria alternata. This causes economic losses and storage challenges, so researchers are exploring alternative methods. The biological control of fruits and vegetables using antagonistic bacteria and yeasts is currently a research hotspot. Initially, the biological control impact of Bacillus velezensis T3 on cherry tomato black spot was investigated. Disease defense, scavenging reactive oxygen species, and antioxidant-related enzymes were determined during different storage periods. The relative gene expressions of these enzymes were also confirmed using RT-qPCR. The results showed that B. velezensis T3 reduced the incidence of black spot disease in cherry tomatoes. The growth of A. alternata was suppressed by B. velezensis T3 cell-free filtrate both in vitro and in vivo. In addition, B. velezensis T3 induced the activities of disease resistance-related enzymes such as polyphenol oxidase (PPO), phenylalanine ammonia-lyase (PAL), β-1,3-glucanase (GLU), and chitinase (CHI), and the activities of the ROS-related enzymes superoxide dismutase (SOD), catalase (CAT), peroxidase (POD), and ascorbate peroxidase (APX), and reduced the rate of O₂⁻ production and H₂O₂, and MDA content of cherry tomatoes. This approach offers a promising alternative for extending shelf life, though further studies are needed to fully characterize its effects on fruit quality. Full article

Tetranychus urticae (Acari: Tetranychidae) is a widely distributed agricultural pest, and it possesses an exceptional capacity to withstand or adapt to short-term heat stress. To investigate the molecular mechanisms underlying this heat tolerance, using both transcriptome and whole-genome data, we identified six distinct POD genes in T. urticae and characterized their physicochemical properties and structural features. Real-time quantitative PCR (RT-qPCR) was utilized to analyze the expression profiles of these genes under short-term heat stress. Our results show that T. urticae mitigates heat-induced oxidative stress through the upregulation of POD gene expression, highlighting the critical role of these genes in the mite’s adaptive response to thermal stress. These findings contribute to a deeper understanding of the molecular pathways that enable T. urticae to survive in fluctuating thermal environments, which is increasingly relevant in the context of global climate change. Furthermore, this study provides a foundation for future research utilizing RNA interference (RNAi) technology to further investigate the functional roles of these POD genes and their potential as targets for pest control strategies. Full article

Soil salinization has emerged as a significant global threat to agricultural productivity. Rice is susceptible to salinity stress at the seedling stage. However, the mechanisms underlying rice responses to salinity stress remain incompletely characterized. In this study, we have characterized a transfer DNA (T-DNA) insertion mutant line of rice, designated OsVPS16 (Os12g0594200), to elucidate its functional role in salt stress tolerance. A real-time quantitative PCR (RT-qPCR) analysis revealed that salt stress inhibited the expression of OsVPS16, with the vps16 mutant showing negligible expression levels. A phenotypic analysis showed that the loss of OsVPS16 enhanced primary root elongation, and increased the survival rate to improve salt stress tolerance. Compared to the wild type (DJ), the vps16 mutant accumulated less Na⁺ and more K⁺ in the shoots under salt stress. Furthermore, the vps16 mutant displayed decreased malondialdehyde (MDA) accumulation and enhanced the activities of superoxide dismutase (SOD) and peroxidase (POD) under salt stress. Transcriptomic profiling identified 1236 differentially expressed genes (DEGs) between vps16 and DJ roots under salt stress. A functional enrichment analysis revealed that DEGs were enriched in protein serine/threonine kinase activity, Ca²⁺ signal pathways, and the MAPK signaling pathway. Notably, the up-regulation of critical protein kinases (PKs) and transcription factors (TFs), including OsSRK1, OsCDPK21, and OsNAC45, probably adds to the effect of OsVPS16 mutation to account for salt stress tolerance. Collectively, comprehensive physiological and molecular analyses demonstrated that the loss of OsVPS16 improves rice salt tolerance through multiple mechanisms, including the regulation of K⁺/Na⁺ homeostasis, the modulation of antioxidant enzyme activities, and the transcriptional reprogramming of stress-responsive genes. This study not only elucidates the function of a novel salt stress response gene in rice, but also provides valuable genetic resources for developing salt-tolerant rice cultivars through molecular breeding approaches. Full article