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Keywords = Mycobacterium paratuberculosis

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18 pages, 3363 KB  
Article
The Results After One Year of an Experimental Protocol Aimed at Reducing Paratuberculosis in an Intensive Dairy Herd
by Anita Filippi, Giordano Ventura, Antonella Lamontanara, Luigi Orrù, Fabio Ostanello, Riccardo Frontoni, Laura Mazzera, Edoardo Tuccia, Matteo Ricchi and Chiara Garbarino
Animals 2025, 15(18), 2695; https://doi.org/10.3390/ani15182695 - 15 Sep 2025
Viewed by 362
Abstract
Paratuberculosis or Johne’s disease is caused by Mycobacterium avium subsp. paratuberculosis (MAP). The disease is characterized by a chronic and incurable enteritis in ruminants and it is responsible for significant economic losses, also raising concerns about food safety and animal welfare. Effective control [...] Read more.
Paratuberculosis or Johne’s disease is caused by Mycobacterium avium subsp. paratuberculosis (MAP). The disease is characterized by a chronic and incurable enteritis in ruminants and it is responsible for significant economic losses, also raising concerns about food safety and animal welfare. Effective control is hindered by diagnostic limitations, long incubation periods, and the environmental resistance of the pathogen. This study aimed to reduce the apparent prevalence of paratuberculosis in a single intensive dairy herd through an integrated approach that combines diagnostics and management strategies. All cows over 24 months of age were tested using both fecal PCR and ELISA serology. Digital PCR (dPCR) was used to quantify MAP shedding in fecal-positive animals, enabling prioritization for removal based on environmental contamination risk. Integrating diagnostic tools allowed the precise identification and quantification of high-risk animals. Meanwhile, structural improvements and biosecurity measures were implemented on the farm. Preliminary outcomes suggest a marked reduction in herd-level MAP prevalence, lowering the seroprevalence from 7.6% to 4.5% and the fecal PCR prevalence from 6.5% to 2.8%. This case highlights the effectiveness of combining laboratory testing (serology and molecular diagnostics) and targeted changes in farm management to control paratuberculosis in high-density dairy systems. Full article
(This article belongs to the Section Cattle)
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11 pages, 709 KB  
Article
Humoral Immune Activation Against Mycobacterium avium subsp. paratuberculosis Through Oral Immunization with Engineered Salmonella
by Azar Motamedi Boroojeni, Nikoo Veiskarami, Elena Rita Simula, Leonardo Antonio Sechi and Abdollah Derakhshandeh
Bacteria 2025, 4(3), 47; https://doi.org/10.3390/bacteria4030047 - 8 Sep 2025
Viewed by 482
Abstract
Attenuated Salmonella strains offer an opportunity for delivering DNA vaccines to antigen-presenting cells. DNA vaccines trigger cellular immune responses, making them suitable for targeting intracellular pathogens, such as Mycobacterium avium subspecies paratuberculosis (MAP). Since whole organism MAP vaccines interfere with tuberculosis diagnosis, innovative [...] Read more.
Attenuated Salmonella strains offer an opportunity for delivering DNA vaccines to antigen-presenting cells. DNA vaccines trigger cellular immune responses, making them suitable for targeting intracellular pathogens, such as Mycobacterium avium subspecies paratuberculosis (MAP). Since whole organism MAP vaccines interfere with tuberculosis diagnosis, innovative vaccine technologies have been introduced to elicit an immune response targeting species-specific antigens. Fibronectin attachment protein (FAP), a MAP surface antigen that is species-specific, can induce cellular immune responses. The present study aims to explore the immunogenic potential of a mammalian expression plasmid encoding the fap-P gene of MAP within a mouse model, utilizing a Salmonella vector for oral immunization using a fluorescent assay and Western blot analysis. The results proved the ability of the constructed plasmid to stimulate the humoral immune response in mice. Moreover, fluorescence microscopy of splenocytes confirmed the successful delivery of the plasmid to the immune system at 24, 48, and 72 h following oral administration. It can be concluded that FAP-P could be considered a candidate for further investigation in the context of MAP vaccine development. Additionally, the use of Salmonella as a delivery system not only improves the efficacy of DNA vaccines but also helps in the preliminary evaluation of the antigens’ immunogenic properties. Full article
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16 pages, 1217 KB  
Systematic Review
Epidemiology and Diversity of Paratuberculosis in the Arabian Peninsula: A Systematic Review and Meta-Analysis with Implications for One Health
by Md Mazharul Islam, Ahmed K. Elfadl, Aisha Naeem, Randa Abdeen, Haya M. Al-Hajri, Md Abu Sayeed, Haileyesus Dejene, John I. Alawneh and Mohammad Mahmudul Hassan
Pathogens 2025, 14(9), 841; https://doi.org/10.3390/pathogens14090841 - 23 Aug 2025
Viewed by 840
Abstract
Paratuberculosis is a chronic zoonotic bacterial infection, primarily affecting ruminants. This review examines the disease in the Arabian Peninsula, focusing on distribution, molecular diversity, prevalence, and associated risk factors. Following PRISMA guidelines, a systematic search was conducted in PubMed, Scopus, and Web of [...] Read more.
Paratuberculosis is a chronic zoonotic bacterial infection, primarily affecting ruminants. This review examines the disease in the Arabian Peninsula, focusing on distribution, molecular diversity, prevalence, and associated risk factors. Following PRISMA guidelines, a systematic search was conducted in PubMed, Scopus, and Web of Science. After duplicate removal and eligibility screening, data extraction, analysis, and quality assessment were performed. Pathogen sequences were retrieved from NCBI GenBank for phylogenetic analysis. The review included a total of 31 published articles from 1997 to 2025, of which 26 were used in the meta-analysis. Most studies (n = 12) were published between 2011 and 2015, predominantly from Saudi Arabia (n = 22), with no reports from Qatar, Bahrain, or Yemen. The majority of the studies involved camels and sheep (n = 16 on each species), followed by cattle (n = 9), goats (n = 7), humans (n = 2), and buffalo (n = 1). Phylogenetic analysis delineates two major clades—Type S and Type C—suggesting greater genetic diversity in Type S. The estimated pooled seroprevalence and pathogen prevalence in livestock ruminants were 8.1% and 22.4%, respectively. Herd-level estimated pooled seroprevalence was 26.9%. Small ruminants (19.3%) were more sero-prevalent than large ruminants (7.4%), with goats (28.7%) significantly (p < 0.01) more affected than sheep (21.5%), camel (9.8%), and cattle (6.6%). Clinical signs in ruminants included chronic diarrhea, emaciation, anorexia, alopecia, wry neck, and dehydration. The reviewed study patterns and findings suggest high pathogen diversity and a significant risk of transboundary transmission at the human–animal interface in this region. A One Health surveillance approach is crucial, particularly on farms with diarrheic and emaciated animals. Establishing a national surveillance plan and phased (short-, intermediate-, and long-term) control programs is essential to mitigate economic losses, limit transmission, overcome the cultural barrier, and protect public health. Full article
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14 pages, 1855 KB  
Article
Oxidative Stress and Apoptotic Markers in Goats Naturally Infected with Mycobacterium avium subsp. paratuberculosis
by Merve Ozturk, Muhammet Bahaeddin Dortbudak, Bayram Bekmez, Lucia Biagini, Nuri Altuğ, Giacomo Rossi, Yasin Ozturk and Alessandro Di Cerbo
Pathogens 2025, 14(6), 593; https://doi.org/10.3390/pathogens14060593 - 16 Jun 2025
Viewed by 961
Abstract
Paratuberculosis, caused by Mycobacterium avium subspecies paratuberculosis (MAP), is a chronic granulomatous enteritis with significant implications for ruminant health, economic productivity, and potential zoonotic risk. This study investigated the expression of biomarkers of oxidative stress and apoptosis in goats naturally infected with MAP, [...] Read more.
Paratuberculosis, caused by Mycobacterium avium subspecies paratuberculosis (MAP), is a chronic granulomatous enteritis with significant implications for ruminant health, economic productivity, and potential zoonotic risk. This study investigated the expression of biomarkers of oxidative stress and apoptosis in goats naturally infected with MAP, focusing on three biological matrices: serum, intestinal mucosa, and mesenteric lymph nodes. Twenty MAP-positive goats and ten healthy controls were included. Serum and tissue levels of malondialdehyde (MDA), glutathione S-transferase (GST), glutathione peroxidase (GPX), superoxide dismutase (SOD), glutathione reductase (GSR), and caspase-3 were quantitatively assessed using ELISA tests. Gross and histopathological analyses confirmed MAP infection. Infected animals showed significantly elevated serum levels of MDA and caspase-3 (p < 0.001), along with decreased antioxidant enzyme activities (GSR, GST, GPX, SOD). Tissue analysis revealed increased MDA and caspase-3 levels, particularly in the intestinal mucosa compared to mesenteric lymph nodes, suggesting localized oxidative damage and apoptosis. Conversely, antioxidant enzyme activity was higher in mesenteric lymph nodes, indicating a compensatory response and a pronounced involvement of the intestinal tract. These findings demonstrate that MAP infection induces marked oxidative stress and apoptotic processes, especially in the intestinal mucosa. The imbalance between pro-oxidant and antioxidant systems may play a key role in the pathogenesis and chronic progression of the disease. Caspase-3 and MDA, in particular, have been identified as promising diagnostic or prognostic biomarkers for MAP infection. This study highlights the importance of developing improved diagnostic tools and therapeutic strategies targeting oxidative stress pathways in paratuberculosis. Full article
(This article belongs to the Special Issue Biology of Mycobacterial Pathogens)
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30 pages, 2743 KB  
Article
High Molecular Diversity of Mycobacterium avium subsp. paratuberculosis in Germany Revealed by Multitarget Genotyping
by Petra Möbius, Marian Price-Carter and Heike Köhler
Int. J. Mol. Sci. 2025, 26(11), 5273; https://doi.org/10.3390/ijms26115273 - 30 May 2025
Cited by 1 | Viewed by 665
Abstract
This study investigated the genetic diversity of Mycobacterium avium subsp. paratuberculosis (Map)—the causative agent of paratuberculosis—isolated from different host species in Germany. A total of 500 isolates from 243 cattle herds and 9 other host species originating from 13 federal states [...] Read more.
This study investigated the genetic diversity of Mycobacterium avium subsp. paratuberculosis (Map)—the causative agent of paratuberculosis—isolated from different host species in Germany. A total of 500 isolates from 243 cattle herds and 9 other host species originating from 13 federal states were genotyped. A multi-target approach was applied, comprising IS900-RFLP with BstEII and PstI digestion; MIRU-VNTR; and SSR1, SSR8, and SSR9 analysis. In total, 93 combined genotypes were identified, 84 in cattle and 21 in non-cattle isolates. Ninety genotypes were assigned to the C-type group, and three genotypes (three from sheep and one from cattle) were assigned to the S-type/subtype III group. Cluster analysis divided genotypes into subgroups similar to those shown for WGS-SNP-based phylogenetic trees. New genotypes were revealed, including INMV262–267 and a specific sequence at locus VNTR7. Five genotypes that were predominant in cattle were also detected in sheep, goats, and deer. The majority of genotypes [61%] were identified only once. Polyclonal infections were observed in individual animals and herds, and various potential Map transmission linkages were uncovered. This high genotype richness of Map reflects the long history of paratuberculosis in Germany and intensive nationwide animal movement and international trading activity. Full article
(This article belongs to the Special Issue Advances in Molecular Biology on Mycobacteria: 2nd Edition)
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13 pages, 1386 KB  
Article
The Impact of Bacillus Calmette–Guérin Vaccination and Mycobacterium bovis Infection on Diagnostic Antibody Tests for Mycobacterial Infections
by Thomas Holder, Nick Robinson and Gareth J. Jones
Vaccines 2025, 13(6), 578; https://doi.org/10.3390/vaccines13060578 - 28 May 2025
Cited by 1 | Viewed by 681
Abstract
Background: Bovine tuberculosis (bTB) is an infectious disease which causes significant damage to the farming industry and remains a disease of global significance. Although control strategies have focused on a test and cull approach primarily based around specific cell-mediated immune responses, serological assays [...] Read more.
Background: Bovine tuberculosis (bTB) is an infectious disease which causes significant damage to the farming industry and remains a disease of global significance. Although control strategies have focused on a test and cull approach primarily based around specific cell-mediated immune responses, serological assays are increasingly being used as a supplementary test alongside skin testing and interferon-gamma release (IGRA) assays. The UK is moving towards the use of the Bacillus Calmette–Guérin (BCG) vaccination of cattle as an additional targeted control tool against bTB. However, there are concerns over its potential impact on the outcomes of bTB diagnostic tests and other non-TB assays, such as serological tests for Mycobacterium avium subsp. paratuberculosis (MAP). Methods: We investigated the performance of commercially available serology tests designed to detect bTB and MAP using serum samples from BCG-vaccinated animals which were subsequently infected with Mycobacterium bovis (M. bovis). Results: BCG vaccination per se did not significantly impact the specificity of serological diagnostic tests for bTB or Johne’s disease. However, increased numbers of false-positive responses in bTB serology tests were seen in BCG-vaccinated animals 3 weeks following a tuberculin skin test, where up to 23% and 54% of animals gave a positive result in IDEXX and Enferplex tests, respectively. Furthermore, M. bovis infection gave rise to false-positive test results for Johne’s disease, irrespective of the animals’ prior BCG vaccination status. Conclusions: Caution should be taken when assessing results from serology tests for bTB if tuberculin skin testing has occurred shortly before collection of blood from BCG-vaccinated cattle. Furthermore, these results highlight the potential for misdiagnosis of MAP infection when using serology tests in bTB-infected cattle. Full article
(This article belongs to the Special Issue Infectious Diseases and Immunization in Animals)
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11 pages, 1038 KB  
Article
A Characterization of the Humoral Immune Response to Human Endogenous Retroviruses and Mycobacterium paratuberculosis in Crohn’s Disease
by Alishba Fayyaz, Luigi Cugia, Marta Noli, Somaye Jasemi, Elena Rita Simula and Leonardo A. Sechi
Pathogens 2025, 14(4), 361; https://doi.org/10.3390/pathogens14040361 - 7 Apr 2025
Viewed by 792
Abstract
Crohn’s disease (CD) is a multifactorial polygenic inflammatory bowel disease linked to aberrant immune response. Mycobacterium paratuberculosis (MAP) has been associated with CD; however, detecting MAP in CD tissues remains highly challenging. Recently, Human Endogenous Retroviruses (HERVs) differential gene expression has been reported [...] Read more.
Crohn’s disease (CD) is a multifactorial polygenic inflammatory bowel disease linked to aberrant immune response. Mycobacterium paratuberculosis (MAP) has been associated with CD; however, detecting MAP in CD tissues remains highly challenging. Recently, Human Endogenous Retroviruses (HERVs) differential gene expression has been reported in CD, but little is known about the involvement of MAP and HERVs in CD pathology. This study aimed to characterize the humoral response against HERV-K, HERV-W, and MAP antigens using an indirect ELISA in plasma samples from CD patients and age- and gender-matched healthy controls (HCs). We observed a significant antibody response against HERV-K and HERV-W epitopes in CD patients in comparison to MAP epitopes, as well as a higher overall antibody response in patients compared to HCs. This study is the first to report the presence of humoral immune response against HERVs antigens in CD. Considering the pro-inflammatory nature of CD, HERVs may contribute to the development or progression of disease in genetically predisposed individuals. However, further research is needed to better understand the complex role of HERVs in CD. Full article
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9 pages, 265 KB  
Opinion
Proposing Bromo-Epi-Androsterone (BEA) for Stiff Person Syndrome (SPS)
by Coad Thomas Dow
Microorganisms 2025, 13(4), 824; https://doi.org/10.3390/microorganisms13040824 - 5 Apr 2025
Cited by 1 | Viewed by 1180
Abstract
SPS is characterized by progressive spasmodic muscular rigidity. SPS is thought to be an autoimmune disease with a prominent feature of antibodies against glutamic acid decarboxylase (GAD). GAD is responsible for the enzymatic conversion of glutamic acid (glutamate) into the inhibitory neurotransmitter gamma-aminobutyric [...] Read more.
SPS is characterized by progressive spasmodic muscular rigidity. SPS is thought to be an autoimmune disease with a prominent feature of antibodies against glutamic acid decarboxylase (GAD). GAD is responsible for the enzymatic conversion of glutamic acid (glutamate) into the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Reduced GABA activity leads to increased excitability in the central nervous system, resulting in muscle rigidity and spasms characteristic of SPS. While SPS is rare, anti-GAD antibodies seen in SPS are also seen in the much more common autoimmune disease, type 1 diabetes (T1D). There is evolving research showing that the anti-GAD antibodies of T1D are produced in response to the presence of mycobacterial heat shock protein 65 (mHSP65), and the mHSP65 is produced in response to an occult infection by a bacterium, Mycobacterium avium subspecies Paratuberculosis (MAP). Humans are broadly exposed to MAP in food, water, and air. There are linear and conformational similarities between the epitopes of GAD and mHSP65. This article proposes that MAP is also an infectious trigger for SPS. Dehydroepiandrosterone (DHEA) is a principal component of the steroid metabolome; it plateaus in young adults and then steadily declines. Bromo-epi-androsterone (BEA) is a potent synthetic analog of DHEA; unlike DHEA, it is non-androgenic, non-anabolic, and an effective modulator of immune dysregulation. BEA is also an anti-infective agent and has been shown to benefit mycobacterial infections, including tuberculosis and leprosy. With the immune stabilizing capacity of BEA as well as its anti-mycobacterial properties, there is reason to believe that a randomized clinical trial with BEA may be beneficial for SPS. Full article
(This article belongs to the Special Issue Advances in Human Infection)
12 pages, 1240 KB  
Article
Prevalence and Genotyping of Mycobacterium avium subsp. paratuberculosis in Sheep from Inner Mongolia, China
by Rong Zhang, Yue-Rong Lv, Bo Yang, Hao Wang, Jun-Tao Jia, Zhi-Hong Wu, Ming Nie, Lian-Yang Sun, Shi-Yuan Xue, Yu-Lin Ding, Rui-Bin Chen, Siqin Tunala, Li Zhao and Yong-Hong Liu
Vet. Sci. 2025, 12(4), 326; https://doi.org/10.3390/vetsci12040326 - 2 Apr 2025
Viewed by 939
Abstract
Background: Paratuberculosis (PTB) is a chronic wasting disease mainly caused by Mycobacterium avium subsp. paratuberculosis (MAP) in ruminants. It is difficult to diagnose, prevent, treat, and eradicate, thereby causing serious economic losses to the livestock industry. Therefore, finding a detection method with high sensitivity [...] Read more.
Background: Paratuberculosis (PTB) is a chronic wasting disease mainly caused by Mycobacterium avium subsp. paratuberculosis (MAP) in ruminants. It is difficult to diagnose, prevent, treat, and eradicate, thereby causing serious economic losses to the livestock industry. Therefore, finding a detection method with high sensitivity and specificity is crucial to preventing and controlling PTB. Methods: A total of 1585 fresh fecal samples were collected from 12 prefectures and cities across Inner Mongolia between March 2022 and October 2024. The samples were subjected to pretreatment, followed by DNA extraction. Subsequently, MAP detection and genotyping were performed using a two-step qPCR method. Results: The overall prevalence of MAP in ovines was 3.34% (53/1585), with the prevalence in 12 prefectures and cities ranging from 0% (0/100) to 7.73% (15/194). In the eastern, central, and western regions, the prevalence rates were 4.74% (31/654), 3.68% (14/394), and 1.49% (8/537); in small-scale and intensive farms, they were 3.23% (22/682), and 3.56% (31/903); and in goats and sheep, they were 0.91% (2/219) and 4.98% (36/723), respectively. The overall prevalence rates of C- and S-type MAP were 2.90% (46/1585) and 0.44% (7/1585), respectively. Conclusions: To the best of our knowledge, this study is the first to conduct an epidemiological investigation of PTB in sheep across all nine cities and three leagues in Inner Mongolia and to perform MAP typing on a large scale. It elucidated the differences in the prevalence of PTB in different regions of Inner Mongolia and found that geographical location and sheep breed are potential risk factors for the differences in MAP prevalence. Furthermore, it has been shown that C- and S-type MAP coexist in the eastern and central regions of Inner Mongolia. Full article
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26 pages, 3684 KB  
Article
Early Growth Response Factor 4 (EGR4) Expression in Gut Tissues and Regional Lymph Nodes of Cattle with Different Types of Paratuberculosis-Associated Lesions: Potential Role of EGR4 in Resilience to Paratuberculosis
by Alejandra Isabel Navarro León, Marta Alonso-Hearn, Marta Muñoz, Natalia Iglesias, Gerard Badia-Bringué, Tania Iglesias, Ana Balseiro and Rosa Casais
Animals 2025, 15(7), 1012; https://doi.org/10.3390/ani15071012 - 31 Mar 2025
Viewed by 544
Abstract
Summary-data-based Mendelian randomization (SMR) analysis identified a novel cis-expression quantitative loci (cis-eQTL) associated with the upregulation of the expression of the early growth response factor 4 (EGR4) gene in animals with paratuberculosis (PTB)-associated multifocal lesions, which has been suggested to be modulating the [...] Read more.
Summary-data-based Mendelian randomization (SMR) analysis identified a novel cis-expression quantitative loci (cis-eQTL) associated with the upregulation of the expression of the early growth response factor 4 (EGR4) gene in animals with paratuberculosis (PTB)-associated multifocal lesions, which has been suggested to be modulating the NF-kβ-induced proinflammatory immune response to Mycobacterium avium subsp. paratuberculosis (Map) infection. To confirm these findings and to study the role of EGR4 expression in PTB resilience, the number of EGR4-expressing cells were analysed in paraffin-fixed gut tissues and regional lymph nodes of naturally Map-infected Holstein Friesian cows with focal, multifocal (subclinical and clinical), and diffuse lesions (intermediate and multibacillary), and in controls without lesions by quantitative anti-EGR4 immunohistochemistry. Subclinical animals with multifocal lesions showed a significantly higher number of EGR4-positive cells and were sacrificed at a significantly older average age than the remaining groups (p < 0.001 in all cases). We hypothesize that EGR4 could be mitigating the negative impact of Map infection on host clinical status through its involvement in three molecular mechanisms that promote resilience: (i) limiting NF-kβ-mediated proinflammatory responses, (ii) controlling tissue damage, acting as a brake on T-cell proliferation and cytokine production, and (iii) favouring tissue repair through interaction with epidermal growth factor receptor (EGFR). Full article
(This article belongs to the Section Veterinary Clinical Studies)
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11 pages, 224 KB  
Article
The Analysis of Paratuberculosis Prevalence and Associated Performance Parameters in Dairy Cows from Xi’an City
by Xuejian Zhao, Qiang Liang, Haipeng Feng, Caixia Ru, Lei Wang, Kang Zhang and Jianxi Li
Vet. Sci. 2025, 12(3), 243; https://doi.org/10.3390/vetsci12030243 - 3 Mar 2025
Viewed by 1296
Abstract
The aim of this study was to understand the status of Mycobacterium paratuberculosis infection in a large-scale dairy farm in Xi’an city and evaluate the impact via a “quarantine + elimination” model of bovine paratuberculosis on the production performance, reproductive performance, and economic [...] Read more.
The aim of this study was to understand the status of Mycobacterium paratuberculosis infection in a large-scale dairy farm in Xi’an city and evaluate the impact via a “quarantine + elimination” model of bovine paratuberculosis on the production performance, reproductive performance, and economic benefits in said dairy farm. The paratuberculosis antibodies from 4488 dairy cow sera were detected by an ELISA kit, complemented by a comprehensive analysis of milk production parameters, health metrics, reproductive indices, and pharmaceutical expenditures (2021–2024). The results indicated that the paratuberculosis prevalence in the dairy farm gradually reduced from 6.76% (2021) to 3.58% (2024). It was also found that the paratuberculosis prevalence among dairy cows increased progressively with the increase in parity until the fifth calving, after which a significant decline was observed. The reduction in infection rates in the herd was correlated with measurable improvements in milk quality metrics, including elevated milk fat and protein content, extended shelf stability, and decreased somatic cell counts in milk. In addition, the reproductive performance of the dairy cows relatively improved with the decrease in paratuberculosis prevalence; there was a relative improvement in the reproductive performance of the dairy cows, which mainly occurred by the time of pregnancy at the first service of the cows, while the number of monthly occurrences of endometritis, diarrhea, calving intervals, and inseminations decreased. Further data correlation analysis showed that daily milk volume was positively correlated with lactase persistence (95% CI: 0.247–0.753, p = 0.001) and peaked at the day of milk production (95% CI: 0.135–0.698, p = 0.008) but was negatively correlated with parity (95% CI: −0.783–−0.315). In addition, lactation time was positively correlated with 305-day milk volume (95% CI: 0.173–0.718, p < 0.004) and peaked at the day of milk production (95% CI: 0.265–0.761) but showed the opposite trend with the milk fat rate (95% CI: −0.633–−0.018, p = 0.040) and milk protein rate (95% CI: −0.738–−0.215, p = 0.002). Furthermore, milk loss was negatively correlated with peak milk production (95% CI: −0.758–−0.258, p = 0.001). Intriguingly, the cost of medications for diarrhea exhibited a downward trend over the past three years. Taken together, these findings confirmed the necessity to reduce the incidence of Mycobacterium avium subsp. paratuberculosis in dairy cows and serve as a guide for the future successful and gradual eradication of paratuberculosis in Chinese dairy cow farms. Full article
(This article belongs to the Section Veterinary Microbiology, Parasitology and Immunology)
19 pages, 3358 KB  
Brief Report
The Impact of Mycobacterium avium subsp. paratuberculosis on Intestinal Microbial Community Composition and Diversity in Small-Tail Han Sheep
by Shi-Yuan Xue, Wei Ma, Meng-Yuan Li, Wei-Kang Meng, Yu-Lin Ding, Bo Yang, Yue-Rong Lv, Rui-Bin Chen, Zhi-Hong Wu, Siqin Tunala, Rong Zhang, Li Zhao and Yong-Hong Liu
Pathogens 2024, 13(12), 1118; https://doi.org/10.3390/pathogens13121118 - 18 Dec 2024
Cited by 1 | Viewed by 1124
Abstract
Paratuberculosis (PTB), primarily caused by Mycobacterium avium subsp. paratuberculosis (MAP), is a chronic infection that affects ruminants and is difficult to prevent, diagnose, and treat. Investigating how MAP infections affect the gut microbiota in sheep can aid in the prevention and treatment of [...] Read more.
Paratuberculosis (PTB), primarily caused by Mycobacterium avium subsp. paratuberculosis (MAP), is a chronic infection that affects ruminants and is difficult to prevent, diagnose, and treat. Investigating how MAP infections affect the gut microbiota in sheep can aid in the prevention and treatment of ovine PTB. This study examined fecal samples from eight small-tail Han sheep (STHS) at various stages of infection and from three different field areas. All samples underwent DNA extraction and 16S rRNA sequencing. Among all samples, the phyla p. Firmicutes and p. Bacteroidota exhibited the highest relative abundance. The dominant genera in groups M1–M6 were UCG-005, Christensenellaceae_R-7_group, Rikenellaceae_RC9_gut_group, Akkermansia, UCG-005, and Bacteroides, whereas those in groups A–C were Christensenellaceae_R-7_group, Escherichia–Shigella, and Acinetobacter, respectively. The microbial community structure varied significantly among groups M1–M6. Specifically, 56 microbiota consortia with different taxonomic levels, including the order Clostridiales, were significantly enriched in groups M1–M6, whereas 96 microbiota consortia at different taxonomic levels, including the family Oscillospiraceae, were significantly enriched in groups A–C. To the best of our knowledge, this is the first study to report that MAP infection alters the intestinal microbiota of STHS. Changes in p. Firmicutes abundance can serve as a potential biomarker to distinguish MAP infection and determine the infection stage for its early diagnosis. Our study provides a theoretical basis for the treatment of PTB by regulating the intestinal microbiota, including p. Firmicutes. Full article
(This article belongs to the Special Issue Gut Microbiome: Current Status and Future Perspectives)
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15 pages, 5901 KB  
Article
Binding of MAP3773c Protein of Mycobacterium avium subsp. paratuberculosis in the Mouse Ferroportin1 Coding Region
by Dulce Liliana Dueñas Mena, José A. Gutiérrez-Pabello, Kaina Quintero Chávez, Mirna Del Carmen Brito-Perea, Dania Melissa Díaz Padilla, Omar Cortez Hernández, José Román Chávez Mendez, Jocelyn Marcela Alcalá Zacarias, Giselle Berenice Vela Sancho and Bertha Landeros Sánchez
Int. J. Mol. Sci. 2024, 25(23), 12687; https://doi.org/10.3390/ijms252312687 - 26 Nov 2024
Viewed by 1584
Abstract
Mycobacterium avium subsp. paratuberculosis (MAP) is known to cause paratuberculosis. One notable protein, MAP3773c, plays a critical role in iron metabolism as a transcription factor. This study aims to investigate the binding affinity of MAP3773c to the chromatin of the Ferroportin1 (FPN1) gene [...] Read more.
Mycobacterium avium subsp. paratuberculosis (MAP) is known to cause paratuberculosis. One notable protein, MAP3773c, plays a critical role in iron metabolism as a transcription factor. This study aims to investigate the binding affinity of MAP3773c to the chromatin of the Ferroportin1 (FPN1) gene in murine macrophage J774 A.1. We conducted a sequence alignment to identify potential interaction sites for MAP3773c. Following this, we used in silico analysis to predict binding interactions, complemented by electrophoretic mobility shift assay (EMSA) to confirm in vitro binding of MAP3773c. The map3773c gene was cloned into the pcDNA3.1 vector, with subsequent expression analysis carried out via Western blotting and real-time PCR. Chromatin immunoprecipitation (CHiP) assays were performed on transfected macrophages to confirm binding in the native chromatin context. Our in silico and in vitro analysis indicated that MAP3773c interacts with two binding motifs within the FPN1 coding region. The ChiP results provided additional validation, demonstrating the binding of MAP3773c to the FPN1 chromatin through successful amplification of the associated chromatin fragment via PCR. Our study demonstrated that MAP3773c binds to FPN1 and provides insight into the role of MAP3773c and its effect on host iron transport. Full article
(This article belongs to the Special Issue Advances in Molecular Biology on Mycobacteria)
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16 pages, 2131 KB  
Article
Detection of Mycobacterium avium subsp. paratuberculosis in Australian Cattle and Sheep by Analysing Volatile Organic Compounds in Faeces
by Rachel Hodgeman, Christian Krill, Simone Rochfort and Brendan Rodoni
Sensors 2024, 24(23), 7443; https://doi.org/10.3390/s24237443 - 21 Nov 2024
Viewed by 1041
Abstract
Paratuberculosis is a debilitating disease of ruminants that causes significant economic loss in both cattle and sheep. Early detection of the disease is crucial to controlling the disease; however, current diagnostic tests lack sensitivity. This study evaluated the potential for volatile organic compounds [...] Read more.
Paratuberculosis is a debilitating disease of ruminants that causes significant economic loss in both cattle and sheep. Early detection of the disease is crucial to controlling the disease; however, current diagnostic tests lack sensitivity. This study evaluated the potential for volatile organic compounds (VOCs) detected by gas chromatography and an electronic nose (eNose) for use as diagnostic tools to differentiate between Map-infected and non-infected cattle and sheep. Solid-phase micro-extraction gas chromatography–mass spectrometry (SPME GC-MS) was used to quantify VOCs from the headspace of faecal samples (cattle and sheep), and partial least squares–discriminant analysis (PLS-DA) was used to determine the suitability as a diagnostic tool. Both the cattle and sheep models had high specificity and sensitivity, 98.1% and 92.3%, respectively, in cattle, and both were 100% in sheep. The eNose was also able to discriminate between Map-infected and non-infected sheep and cattle with 88.9% specificity and 100% sensitivity in sheep and 100% specificity and sensitivity in cattle. This is the first time that VOC analysis by eNose and GCMS has been used for identification of Map in cattle and sheep faeces. GCMS also allowed the identification of putative disease biomarkers, and the eNose diagnostic capability suggests it is a promising tool for point-of-care diagnosis for Map detection on farms. Full article
(This article belongs to the Section Smart Agriculture)
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Article
Discovery of Mycobacterium avium subsp. paratuberculosis Lytic Phages with Extensive Host Range Across Rapid- and Slow-Growing Pathogenic Mycobacterial Species
by Aleen Clare Golla, Jeanne Chaumontet, Rebecca Vande Voorde and Lia Danelishvili
Antibiotics 2024, 13(11), 1009; https://doi.org/10.3390/antibiotics13111009 - 27 Oct 2024
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Abstract
Background/Objectives: Developing interventions for Johne’s disease, which focuses on controlling Mycobacterium avium subsp. paratuberculosis (MAP) in contaminated environments by treating infected cows and preventing transmission from diseased animals, is a critical priority. Bacteriophage (phage) therapy, an emerging biological intervention, offers a promising alternative [...] Read more.
Background/Objectives: Developing interventions for Johne’s disease, which focuses on controlling Mycobacterium avium subsp. paratuberculosis (MAP) in contaminated environments by treating infected cows and preventing transmission from diseased animals, is a critical priority. Bacteriophage (phage) therapy, an emerging biological intervention, offers a promising alternative for the treatment and management of MAP infections. Methods: In this study, we generated an MAP-specific lytic phage library aimed at characterizing the therapeutic potential of phages under environmental and biological conditions that mimic those encountered in infected cattle such as ruminal fluid, milk, colostrum, and the bovine intestinal epithelium, a key site of MAP colonization and, later, transmission. Results: Our library contains a diverse collection of phages that have demonstrated robust lytic activity against MAP. The host range of these phages was thoroughly assessed, revealing that several isolates produce clear plaques on a range of MAP strains, as well as other pathogenic non-tuberculous mycobacterial (NTM) species and M. tuberculosis strains. This broad host range expands the therapeutic potential of the phage collection, positioning it as a potential cross-species antimicrobial tool. In vitro tests under conditions replicating the rumen, milk, and colostrum environments show that selected phages maintain stability and lytic efficacy, even in the presence of complex biological fluids. Furthermore, a subset of these phages was capable of preventing MAP colonization and invasion in cultured bovine epithelial cells, suggesting their potential for direct prophylactic application in cattle. Conclusions. Our collection of MAP phages represents a valuable source that can be developed into probiotic-like preparations, offering a cost-effective solution for prophylaxis and control of Johne’s disease. Full article
(This article belongs to the Topic Challenges and Future Prospects of Antibacterial Therapy)
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