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Keywords = GC×GC-MS analysis

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21 pages, 3716 KB  
Article
A Synergistic Approach with Doxycycline and Spirulina Extracts in DNBS-Induced Colitis: Enhancing Remission and Controlling Relapse
by Meriem Aziez, Mohamed Malik Mahdjoub, Tahar Benayad, Ferroudja Abbas, Sarah Hamid, Hamza Moussa, Ibrahima Mamadou Sall, Hichem Tahraoui, Abdeltif Amrane and Noureddine Bribi
J. Xenobiot. 2025, 15(5), 160; https://doi.org/10.3390/jox15050160 - 3 Oct 2025
Abstract
Background: Chronic relapsing colitis involves immune dysregulation and oxidative stress, making monotherapies often insufficient. This study investigates a therapeutic strategy combining doxycycline (Dox), an immunomodulatory antibiotic, with Arthrospira platensis extracts to enhance anti-inflammatory and antioxidant effects, improving remission and controlling relapse. Methods: Ethanolic [...] Read more.
Background: Chronic relapsing colitis involves immune dysregulation and oxidative stress, making monotherapies often insufficient. This study investigates a therapeutic strategy combining doxycycline (Dox), an immunomodulatory antibiotic, with Arthrospira platensis extracts to enhance anti-inflammatory and antioxidant effects, improving remission and controlling relapse. Methods: Ethanolic (ES) and aqueous (AS) extracts of A. platensis were chemically characterized by GC-MS after derivatization. Colitis was induced in mice using two intrarectal DNBS administrations spaced 7 days apart, with oral treatments (Dox, ES, AS, or combinations) given daily between doses. Disease progression was evaluated through clinical monitoring, histological scoring, and biochemical analysis, including MPO and CAT activities, as well as NO, MDA, and GSH levels. Results: GC-MS identified 16 bioactive compounds in each extract. ES contained mainly fatty acids and amino acids, whereas AS was rich in polysaccharides and phytol. Combined doxycycline and A. platensis extracts significantly enhanced recovery in reactivated DNBS colitis compared to monotherapies. Each treatment alone reduced disease severity, but their combination showed synergistic effects, significantly reducing disease activity index (p < 0.001), restoring mucosal integrity, and modulating inflammatory and oxidative markers (p < 0.001). Conclusion: Doxycycline potentiates the anti-colitic effects of A. platensis extracts via complementary mechanisms, offering a promising combination for managing relapsing colitis. Full article
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15 pages, 1190 KB  
Article
Tropical Weathering Effects on Neat Gasoline: An Analytical Study of Volatile Organic Profiles
by Khairul Osman, Naadiah Ahmad Mazlani, Gina Francesca Gabriel, Noor Hazfalinda Hamzah, Rogayah Abu Hassan, Dzulkiflee Ismail and Wan Nur Syuhaila Mat Desa
Chemosensors 2025, 13(10), 363; https://doi.org/10.3390/chemosensors13100363 - 3 Oct 2025
Abstract
Gasoline is the most common ignitable liquid used to initiate fires, making its detection and identification in fire debris crucial for determining incendiary origins. Fire debris is typically collected after extinguishment and safety clearance, often resulting in gasoline weathering, especially when delayed. Most [...] Read more.
Gasoline is the most common ignitable liquid used to initiate fires, making its detection and identification in fire debris crucial for determining incendiary origins. Fire debris is typically collected after extinguishment and safety clearance, often resulting in gasoline weathering, especially when delayed. Most research on gasoline weathering has been conducted in controlled laboratory settings in temperate climates. However, the effects of tropical conditions on the rate of gasoline weathering and the resulting chemical composition of volatiles remain largely unexplored. Understanding how tropical environmental factors alter gasoline weathering is essential for accurate fire debris interpretation in such regions. This study investigates how tropical climates impact gasoline weathering indoors and outdoors. Weathered samples were prepared by volume reduction method, gradually evaporating gasoline from 10% to 95%. Indoor samples were exposed to room temperature, while outdoor samples were left in open space under natural tropical conditions. Gas Chromatography/Mass Spectrometry (GC-MS) analysis revealed chromatographic shifts in heavier compounds (C3–C4 alkylbenzenes) compared to lighter ones like toluene as weathering progressed. Correlation between indoor and outdoor samples was high (>0.970) at 10–50% weathering but declined (<0.600) at 90–95%, indicating differing patterns. All target compounds remained detectable across all samples. Full article
(This article belongs to the Section Analytical Methods, Instrumentation and Miniaturization)
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16 pages, 1349 KB  
Article
Chemical Profiling and Sensory Analysis Reveal Quality Differentiation in Baimudan White Tea Processed from Three Major Fujian Tea Cultivars
by Yucheng Zheng, Yuping Zhang, Yun Zou, Yutao Shi, Jianming Zhang, Huili Deng, Zhanhua Ji, Zhenying Liang and Xinlei Li
Horticulturae 2025, 11(10), 1196; https://doi.org/10.3390/horticulturae11101196 - 3 Oct 2025
Abstract
White tea quality is primarily determined by its chemical composition, which varies significantly among cultivars. This study aimed to elucidate the chemical basis underlying quality differentiation in Baimudan white tea produced from three major Fujian tea cultivars: “Zhenghe Dabaicha” (ZHDB), “Fuan Dabaicha” (FADB), [...] Read more.
White tea quality is primarily determined by its chemical composition, which varies significantly among cultivars. This study aimed to elucidate the chemical basis underlying quality differentiation in Baimudan white tea produced from three major Fujian tea cultivars: “Zhenghe Dabaicha” (ZHDB), “Fuan Dabaicha” (FADB), and “Fuding Dahaocha” (FDDH). Headspace solid-phase microextraction coupled with gas chromatography–mass spectrometry (HS-SPME-GC-MS), liquid chromatography–mass spectrometry (LC-MS), and quantitative descriptive analysis (QDA) were employed to characterize volatile compounds, amino acids, and saccharides. Odor Activity Values (OAVs) and Taste Activity Values (TAVs) were calculated to identify key contributors to sensory perception. Results showed that theanine, glutamic acid, asparagine, and serine were the primary contributors to umami taste, especially in ZHDB and FADB. Sweetness differences were largely due to sucrose, serine, and asparagine. OAV analysis further identified 22 critical aroma compounds: methyl salicylate, linalool, and β-ionone predominantly imparted floral notes, while β-ocimene, benzaldehyde, and geraniol enhanced sweet and fruity aromas. In contrast, (Z)-3-hexenol, (Z)-3-hexenal, and (E)-2-hexenal contributed grassy and refreshing characteristics, together defining the unique aroma profiles of each cultivar. This study provides an integrated chemical and sensory framework for understanding white tea quality variation, offering a theoretical basis for targeted flavor modulation. Full article
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18 pages, 1975 KB  
Article
Solvent-Assisted Vapor Condensation: A Strategy to Enhance Bio-Oil Yield and Quality from the Pyrolysis of Agro-Industrial Waste
by Jelena Isailović, Emilija Vukićević, Jan Schwarzbauer, Steva Lević, Mališa Antić, Ilija Brčeski, Branimir Jovančićević and Vesna Antić
Molecules 2025, 30(19), 3945; https://doi.org/10.3390/molecules30193945 - 1 Oct 2025
Abstract
The paper presents the effect of an organic solvent on the efficiency of vapor condensation from pyrolysis processes applied to agricultural waste, with the intention of optimizing the trapping procedure for more volatile components. Therefore, the effect of the use of acetone in [...] Read more.
The paper presents the effect of an organic solvent on the efficiency of vapor condensation from pyrolysis processes applied to agricultural waste, with the intention of optimizing the trapping procedure for more volatile components. Therefore, the effect of the use of acetone in the vapor trapping system on the yield and composition of liquid fractions (bio-oils) obtained from the pyrolysis of selected agricultural waste, including corn, tomato, and tobacco, was investigated. The focus was placed on evaluating how solvents influence the quality, yield, and composition of bio-oil, as well as whether they are necessary in the pyrolysis process. Acetone, a polar solvent with low human toxicity and the possibility of regeneration after pyrolysis, was selected for bio-oil condensation due to its effectiveness in dissolving polar compounds formed during the pyrolysis of lignocellulosic biomass. Pyrolysis was conducted at 400 and 500 °C for 30 min, to collect light and heavy fractions, which were subsequently analyzed to assess acetone’s influence. The results showed that acetone positively affected corn bio-oil yield (from 44.57% without acetone to 52.13% with acetone) and improved quality by reducing moisture (from 61.82% to 12.83%) and oxygen content (from 86.50% to 47.10%). An increase in calorific value was also observed in both corn varieties, while the effect was minimal in tobacco and nearly negligible in tomato. The obtained parameter values indicated that satisfactory results can also be achieved without the use of a solvent, representing a step toward simplified pyrolysis. GC-MS analysis confirmed that phenols and their derivatives were the dominant compounds, while FTIR analysis verified the presence of functional groups of the identified compounds. Increasing the temperature generally increased both the yield and calorific value of most samples. Light and heavy fractions were separated during condensation to improve collection efficiency and enable better quality control. Although this step adds complexity and potential contamination risks, it allows more effective utilization of the fractions. These results provide a valuable foundation for optimizing the valorization of agricultural waste through pyrolysis-based biofuel production. Full article
(This article belongs to the Special Issue Advances in Lignocellulosic Biomass)
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18 pages, 1555 KB  
Article
Alternative Yeast Strains in Beer Production: Impacts on Quality and Nutritional Value
by Loránd Alexa, Hajnalka Csoma, Diána Ungai, Béla Kovács, Nikolett Czipa, Ida Miklós, Zoltán Kállai, László Attila Papp and Szonja Takács
Beverages 2025, 11(5), 142; https://doi.org/10.3390/beverages11050142 - 1 Oct 2025
Abstract
Discovering new yeast species can be crucial for creating new types of beers. In this study, we investigated three new yeast species, Saccharomyces bayanus, Schizosaccharomyces japonicus and Schizosaccharomyces pombe var. malidevorans, which have not been previously used in the brewing industry. [...] Read more.
Discovering new yeast species can be crucial for creating new types of beers. In this study, we investigated three new yeast species, Saccharomyces bayanus, Schizosaccharomyces japonicus and Schizosaccharomyces pombe var. malidevorans, which have not been previously used in the brewing industry. Colour, total acidity, bitterness, aroma profile, total phenolic, flavonoid, mineral content and organoleptic characteristics of beers fermented by these strains were analysed to discover their applicability in the brewing industry. They did not significantly affect the nutritional value and colour of the beers, but showed increased acidity compared to the control Saccharomyces cerevisiae. GC-MS (Gas Chromatography-Mass Spectrometry) analysis revealed 33 aroma compounds, some of which were identical and some unique. S. cerevisiae and S. bayanus produced a similar number (19–20) of aroma compounds, while S. japonicus produced the fewest, including some undesirable compounds. Isobutyl alcohol, isoamyl alcohol, acetol, dimethylpyrazine, acetic acid, 4-cyclopentene-1,3-dione, butyrolactone, 2-furanmethanol, phenylethyl alcohol, maltol and pyranone that provide desired aromas in beers could be found in every sample. The new yeasts significantly increased polyphenols and decreased flavonoid content. Based on the results above and the taste scores, the strains S. bayanus and S. pombe var. malidevorans may be suitable for brewing, while S. japonicus is less or only suitable for combined fermentation. Full article
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14 pages, 2109 KB  
Article
Impact of Artemisia selengensis Turcz. Leaf Extract on Beer Brewing: Fermentation Dynamics, Flavor Compounds and Hypolipidemic/Antihyperuricemic Effects
by Zeyu Li, Jiazhi Zhou, Chaoqun Ye, Jian Yang and Changli Zeng
Molecules 2025, 30(19), 3936; https://doi.org/10.3390/molecules30193936 - 1 Oct 2025
Abstract
Artemisia selengensis Turcz. (AST), an edible-medicinal herb, contains multifunctional bioactives. This study investigated the application of AST leaf extract (ASTLE) in beer brewing, focusing on the addition stage and its impacts on fermentation dynamics, flavor profile, and functional properties. Fermentation parameters, bioactive compounds [...] Read more.
Artemisia selengensis Turcz. (AST), an edible-medicinal herb, contains multifunctional bioactives. This study investigated the application of AST leaf extract (ASTLE) in beer brewing, focusing on the addition stage and its impacts on fermentation dynamics, flavor profile, and functional properties. Fermentation parameters, bioactive compounds (phenolic; flavonoid), and volatiles (using HS-SPME-GC-MS) were analyzed. In vivo efficacy was assessed in high-fat diet-fed mice supplemented for 8 weeks with beer containing 10% ASTLE (post-primary fermentation), evaluating body weight change, serum lipids, and uric acid levels. It was found that adding ASTLE before primary fermentation promoted yeast activity but increased the risk of excessive diacetyl production. Adding ASTLE after primary fermentation significantly increased total phenolic and flavonoid contents. GC-MS analysis revealed that ASTLE contributed 28 additional volatile compounds, including chrysanthenone and eucalyptol, thereby enriching the beer’s flavor profile and complexity. In mice, beer with 10% ASTLE (post-primary fermentation) reduced body-weight gain, and regulated abnormal blood lipids and serum uric acid levels. Adding ASTLE after primary fermentation optimized fermentation stability, bioactive retention, flavor enhancement, and conferred benefits including body-weight regulation, lipid metabolism improvement, and uric acid control, providing a reference for developing functional beers targeting health-conscious consumers. Full article
(This article belongs to the Collection Advances in Food Chemistry)
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14 pages, 2457 KB  
Article
Drying and Storage Influence the Formation of Key Aromatic Constituents in Blue Fenugreek (Trigonella caerulea)
by Thomas Stegemann, Mayra Galarza Pérez, Alessia Castellan, Susanne Klocke, Dietrich Ober, Manuel Pramsohler and Serhat Sezai Çiçek
Horticulturae 2025, 11(10), 1164; https://doi.org/10.3390/horticulturae11101164 - 1 Oct 2025
Abstract
The dried herb of blue fenugreek is used as a spice in the alpine region for the preparation of traditional bread and cheese. After drying, the herb is stored for a period of six to twelve months. During this time, the herb is [...] Read more.
The dried herb of blue fenugreek is used as a spice in the alpine region for the preparation of traditional bread and cheese. After drying, the herb is stored for a period of six to twelve months. During this time, the herb is expected to undergo changes in the compositions of the major flavor- and odor-determining compounds. To identify eventual biochemical processes, we applied different growing (conventional and sterile) and drying (air- and freeze drying) conditions and subsequently conducted periodical analysis of key aroma constituents (α-keto acids and volatile compounds) by LC-MS and GC-MS. The amount of glyoxylic acid was drastically increased in the air-dried sample, while the freeze-dried sample showed significantly higher amounts of α-keto-glutaric acid and pyruvic acid, respectively. During storage, a decrease in sulfuric compounds and an increase in alkane aldehydes were observed when comparing conventional and sterile samples. However, this increase was even greater for monoterpenes (especially camphor and p-cymene), showing thrice as high amounts after storage. Interestingly, both compounds were only formed significantly during the storage under conventional conditions, indicating that their production is induced/caused by microbial organisms. Full article
(This article belongs to the Special Issue Flavor Biochemistry of Horticultural Plants)
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16 pages, 2498 KB  
Article
Nanoparticles Enhance in Vitro Micropropagation and Secondary Metabolite Accumulation in Origanum petraeum
by Tamara S. Al Qudah, Rida A. Shibli, Rund Abu-Zurayk and Mohammad Hudaib
Nanomaterials 2025, 15(19), 1496; https://doi.org/10.3390/nano15191496 - 30 Sep 2025
Abstract
Origanum petraeum Danin, an endemic medicinal shrub from Jordan, belongs to the Lamiaceae family and possesses significant pharmaceutical potential, yet its secondary metabolite profile remains largely unexplored. This study evaluated the effects of two types of nanoparticles, silver (Ag) and copper (Cu), on [...] Read more.
Origanum petraeum Danin, an endemic medicinal shrub from Jordan, belongs to the Lamiaceae family and possesses significant pharmaceutical potential, yet its secondary metabolite profile remains largely unexplored. This study evaluated the effects of two types of nanoparticles, silver (Ag) and copper (Cu), on in vitro propagation and secondary metabolite composition in O. petraeum microshoots. Sterilized buds were used to initiate in vitro cultures on Murashige and Skoog (MS) medium supplemented with gibberellic acid (GA3) at 0.5 mg/L. Microshoots were treated with nanoparticles at concentrations of 0, 25, 50, 100, and 150 mg/L. AgNPs at 100 mg/L promoted growth, increasing the number of microshoots to 11.6 and shoot height to 9.22 cm. Transmission electron microscopy confirmed nanoparticle uptake and translocation, with AgNPs observed in root cells as small particles (≤24.63 nm), while CuNPs formed aggregates in leaves (47.71 nm). GC-MS analysis revealed that nanoparticles altered the volatile composition; 50 mg/L CuNPs enhanced monoterpenes, including α-terpinyl acetate (29.23%) and geranyl acetate (12.76%), whereas 50 mg/L AgNPs increased sesquiterpenes, such as caryophyllene oxide (28.45%). Control in vitro cultures without nanoparticles showed simpler profiles dominated by caryophyllene oxide, while wild plants contained both monoterpenes and sesquiterpenes, with eudesm-7(11)-en-4-ol (25.10%) as the major compound. Nutrient analysis indicated that nanoparticles influenced nutrient composition in microshoots. This study is the first to report nanoparticle-assisted growth and essential oil composition in O. petraeum, demonstrating their potential to enhance growth and secondary metabolite production for pharmacological and biotechnological applications. Full article
(This article belongs to the Section Nanotechnology in Agriculture)
20 pages, 2006 KB  
Article
Foliar-Selenium-Induced Modulation of Volatile Organic Compounds in Rice Grains: A Comparative Study of Sodium Selenite and Nano-Selenium
by Yin Xiong, Yingying Hu, Ruomeng Li, Haoyue Cheng, Yulin Wu, Xuhong Tian, Yibo Chen, Jingbo Zhou, Lei Zhao and Chongrong Wang
Foods 2025, 14(19), 3399; https://doi.org/10.3390/foods14193399 - 30 Sep 2025
Abstract
Rice aroma is influenced by many factors, including selenium (Se) fertilizer. In this study, we investigated the effects of different Se species on the volatile organic compounds (VOCs) in three indica rice varieties over 2022 and 2023 by forliar spray. The VOCs were [...] Read more.
Rice aroma is influenced by many factors, including selenium (Se) fertilizer. In this study, we investigated the effects of different Se species on the volatile organic compounds (VOCs) in three indica rice varieties over 2022 and 2023 by forliar spray. The VOCs were analyzed using HS-SPME-GC-MS. The results showed that both Se nanoparticles (SeNPs) and sodium selenite (Na2SeO3) significantly increased the contents of most VOCs in all three varieties, with SeNPs exhibiting a more pronounced effect. PCA and OPLS-DA revealed distinct clustering of the VOCs based on Se treatments and rice varieties. By variable importance in projection (VIP) analysis with FDR correction, Na2SeO3 yielded 7 markers, whereas SeNP treatment identified 18. Every marker detected under Na2SeO3 was fully encompassed within the SeNPs set. Three-factor ANOVA indicated that there are significant interaction effects among Se species, rice variety, and planting year. Additionally, the effect sizes were evaluated in the key VOCs to quantify the effect of Se species, rice variety, and planting year. The findings highlight Se fertilizers to enhance rice aroma and suggest selecting appropriate Se species and rice varieties for aroma improvement. Full article
24 pages, 13107 KB  
Article
Assessing the Insecticidal Performance of Commiphora myrrha Essential Oil Against Prostephanus truncatus and Sitophilus zeamais Using a Metabolomic Approach
by Nickolas G. Kavallieratos, Maria C. Boukouvala, Constantin S. Filintas, Demeter Lorentha S. Gidari, Anna Skourti, Vasiliki Panagiota C. Kyrpislidi, Filippo Maggi, Riccardo Petrelli, Eleonora Spinozzi, Marta Ferrati, Cristina Teruzzi and Fabrizio Araniti
Plants 2025, 14(19), 3031; https://doi.org/10.3390/plants14193031 - 30 Sep 2025
Abstract
Botanical insecticides have gained interest due to a rising demand for environmentally friendly pest control methods for stored-product protection. The insecticidal effectiveness of the essential oil (EO) obtained from the oleo-gum-resin of myrrh (Commiphora myrrha (Nees) Engl.), against Prostephanus truncatus (Horn) and [...] Read more.
Botanical insecticides have gained interest due to a rising demand for environmentally friendly pest control methods for stored-product protection. The insecticidal effectiveness of the essential oil (EO) obtained from the oleo-gum-resin of myrrh (Commiphora myrrha (Nees) Engl.), against Prostephanus truncatus (Horn) and Sitophilus zeamais Motschulsky, and the metabolic shifts of the two species, were investigated in this work. A thorough gas chromatography-mass spectrometry (GC-MS) investigation showed that the composition of this EO was dominated by furanosesquiterpenes, specifically, furanoeudesma-1,3-diene and curzerene. Commiphora myrrha EO treatments, especially at 1000 ppm, resulted in high adult mortality for P. truncatus (up to 85.6%), while S. zeamais showed only moderate mortality (up to 25.6%). To investigate the different species-specific effectiveness of the EO, untargeted GC-MS metabolomic profiling was conducted to elucidate the impact of the EO on the metabolism of the insects, with subsequent data analysis employing multivariate, univariate, and network methods. Each species reacts differently to the treatments (myrrh EO versus the synthetic insecticide pirimiphos-methyl (PM)), according to the analysis results. In particular, myrrh EO caused distinct shifts in metabolic pathways that varied between P. truncatus and S. zeamais. Overall, C. myrrha EO exhibits potential as a botanical insecticide, especially against P. truncatus, and it causes metabolic disturbances specific to the species. The results demonstrate the significance of metabolomic technologies in assessing bioinsecticide mechanisms and lend credence to their possible incorporation in integrated pest management methodologies or their contribution to the creation of diagnostic indicators of insecticidal exposure. Full article
(This article belongs to the Special Issue Green Insect Control: The Potential Impact of Plant Essential Oils)
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15 pages, 1897 KB  
Article
Sources and Reactivity of Ambient VOCs on the Tibetan Plateau: Insights from a Multi-Site Campaign (2012–2014) for Assessing Decadal Change
by Fangkun Wu, Jie Sun, Yinghong Wang and Zirui Liu
Atmosphere 2025, 16(10), 1148; https://doi.org/10.3390/atmos16101148 - 30 Sep 2025
Abstract
Investigating atmospheric volatile organic compounds (VOCs) is critical for understanding their sources, chemical reactivity, and impacts on air quality, climate, and human health, especially in remote regions like the Tibetan Plateau where baseline data remains scarce. In this study, ambient VOCs species were [...] Read more.
Investigating atmospheric volatile organic compounds (VOCs) is critical for understanding their sources, chemical reactivity, and impacts on air quality, climate, and human health, especially in remote regions like the Tibetan Plateau where baseline data remains scarce. In this study, ambient VOCs species were simultaneously measured at four remote background sites on the Tibetan Plateau (Nyingchi, Namtso, Ngari, and Mount Everest) from 2012 to 2014 to investigate their concentration, composition, sources, and chemical reactivity. Weekly integrated samples were collected and analyzed using a Gas Chromatograph-Mass Spectrometer/Flame Ionization Detector (GC-MS/FID) system. The total VOC mixing ratios exhibited site-dependent variability, with the highest levels observed in Nyingchi, followed by Mount Everest, Ngari and Namtso. The VOC composition in those remote sites was dominated by alkanes (25.7–48.5%) and aromatics (11.4–34.7%), followed by halocarbons (19.1–28.1%) and alkenes (11.5–18.5%). A distinct seasonal trend was observed, with higher VOC concentrations in summer and lower levels in spring and autumn. Source analysis based on correlations between specific VOC species suggests that combustion emissions (e.g., biomass burning or residential heating) were a major contributor during winter and spring, while traffic-related emissions influenced summer VOC levels. In addition, long-range transport of pollutants from South Asia also significantly impacted VOC concentrations across the plateau. Furthermore, reactivity assessments indicated that alkenes were the dominant contributors to OH radical loss rates, whereas aromatics were the largest drivers of ozone formation potential (OFP). These findings highlight the complex interplay of local emissions and regional transport in shaping VOC chemistry in this high-altitude background environment, with implications for atmospheric oxidation capacity and secondary pollutant formation. Full article
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20 pages, 12181 KB  
Article
Neuroprotective and Neurotrophic Potential of Flammulina velutipes Extracts in Primary Hippocampal Neuronal Culture
by Sarmistha Mitra, Raju Dash, Md Abul Bashar, Kishor Mazumder and Il Soo Moon
Nutrients 2025, 17(19), 3107; https://doi.org/10.3390/nu17193107 - 30 Sep 2025
Abstract
Flammulina velutipes (enoki mushroom) is a functional edible mushroom rich in antioxidants, polysaccharides, mycosterols, fiber, and minerals. Accumulating evidence highlights its therapeutic potential across diverse pathological contexts, including boosting cognitive function. However, its role in neuromodulation has not been systematically explored. This study [...] Read more.
Flammulina velutipes (enoki mushroom) is a functional edible mushroom rich in antioxidants, polysaccharides, mycosterols, fiber, and minerals. Accumulating evidence highlights its therapeutic potential across diverse pathological contexts, including boosting cognitive function. However, its role in neuromodulation has not been systematically explored. This study examined the effects of methanolic and ethanolic extracts of F. velutipes on primary hippocampal neurons. Neurons were treated with different extract concentrations, followed by assessments of cell viability, cytoarchitecture, neuritogenesis, maturation, and neuroprotection under oxidative stress. The extracts were further characterized by GC-MS to identify bioactive metabolites, and molecular docking combined with MM-GBSA binding energy analysis was employed to predict potential modulators. Our results demonstrated that the methanolic extract significantly enhanced neurite outgrowth, improved neuronal cytoarchitecture, and promoted survival under oxidative stress, whereas the ethanolic extract produced moderate effects. Mechanistic studies indicated that these neuroprotective and neurodevelopmental benefits were mediated through activation of the NTRK receptors, as validated by both in vitro assays and molecular docking studies. Collectively, these findings suggest that F. velutipes extracts, particularly methanolic fractions, may serve as promising neuromodulatory agents for promoting neuronal development and protecting neurons from oxidative stress. Full article
(This article belongs to the Special Issue Effects of Plant Extracts on Human Health—2nd Edition)
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22 pages, 3938 KB  
Article
Tree Species Overcome Edaphic Heterogeneity in Shaping the Urban Orchard Soil Microbiome and Metabolome
by Emoke Dalma Kovacs and Melinda Haydee Kovacs
Horticulturae 2025, 11(10), 1163; https://doi.org/10.3390/horticulturae11101163 - 30 Sep 2025
Abstract
Despite the increasing recognition of the role of urban orchard ecosystems in sustainable urban development, the mechanistic understanding of how tree species soil biochemical heterogeneity drives microbial community assembly, the spatial patterns governing microbe-environment interactions, and their collective contributions to ecosystem multifunctionality remain [...] Read more.
Despite the increasing recognition of the role of urban orchard ecosystems in sustainable urban development, the mechanistic understanding of how tree species soil biochemical heterogeneity drives microbial community assembly, the spatial patterns governing microbe-environment interactions, and their collective contributions to ecosystem multifunctionality remain poorly characterized. This study investigated how Prunus species and soil depth affect microbial biodiversity and metabolomic signatures in an urban orchard in Cluj-Napoca, Romania. Soil samples were collected from five fruit tree species (apricot, peach, plum, cherry, and sour cherry) across three depths (0–10, 10–20, and 20–30 cm), resulting in 225 samples. The microbial community structure was analyzed through phospholipid fatty acid (PLFA) profiling, whereas the soil metabolome was analyzed by mass spectrometry techniques, including gas chromatography–mass spectrometry (GC–MS/MS) and MALDI time-of-flight (TOF/TOF) MS, which identified 489 compounds across 18 chemical classes. The results revealed significant tree species-specific effects on soil microbial biodiversity, with bacterial biomarkers dominating and total microbial biomass varying among species. The soils related to apricot trees presented the highest microbial activity, particularly in the surface layers. Metabolomic analysis revealed 247 distinct KEGG-annotated metabolites, with sour cherry exhibiting unique organic acid profiles and cherry showing distinctive quinone accumulation. Depth stratification influenced both microbial communities and metabolite composition, reflecting oxygen gradients and substrate availability. These findings provide mechanistic insights into urban orchard soil biogeochemistry, suggesting that strategic species selection can harness tree species-soil microbe interactions to optimize urban soil ecosystem services and enhance urban biodiversity conservation. Full article
(This article belongs to the Section Fruit Production Systems)
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25 pages, 1309 KB  
Article
Metabolomic Signatures of Transitional Breast Milk in Gestational Diabetes Mellitus: A Case–Control Study Assessing the Impact of Insulin Therapy
by Merve Küçükoğlu Keser, Sıddika Songül Yalçin, Tuba Reçber and Emirhan Nemutlu
Nutrients 2025, 17(19), 3101; https://doi.org/10.3390/nu17193101 - 29 Sep 2025
Abstract
Background/Objectives: Gestational diabetes mellitus (GDM) alters maternal metabolism during pregnancy and may impact the biochemical composition of breast milk. Given the critical role of human milk in early-life metabolic programming, identifying metabolic alterations in GDM milk and understanding the effects of insulin [...] Read more.
Background/Objectives: Gestational diabetes mellitus (GDM) alters maternal metabolism during pregnancy and may impact the biochemical composition of breast milk. Given the critical role of human milk in early-life metabolic programming, identifying metabolic alterations in GDM milk and understanding the effects of insulin therapy has important implications for neonatal health. This study aims to investigate the metabolomic profile of transitional breast milk in mothers with gestational diabetes mellitus compared with healthy controls and to evaluate the impact of insulin therapy on milk metabolite composition. Methods: Breast milk samples were collected between postpartum days 10 and 15 from 80 mothers with GDM and 80 matched controls. Metabolomic profiling was performed using gas chromatography–mass spectrometry (GC–MS), and data were analyzed using multivariate and univariate statistical techniques including PCA, PLS–DA, logistic regression, and ROC analysis. Conclusions: A total of 133 metabolites were identified, and GDM mothers exhibited a distinct metabolomic signature characterized by significant alterations in carbohydrate, amino acid, and microbial-derived metabolites. In particular, galactinol, arabitol, and pyrogallol were significantly decreased, while α-ketoglutaric acid and citric acid were elevated in the GDM group. Insulin-treated mothers showed unique metabolic changes involving glycolytic intermediates (glycerone phosphoric acid), purine metabolism (xanthine), and oxidative pathways (isocitric acid, gluconic acid lactone). Multivariate models based on the top metabolites achieved moderate discriminatory performance (AUC = 0.68). GDM is associated with substantial metabolic changes in transitional breast milk, and insulin therapy appears to modulate these alterations further. These findings suggest that maternal metabolic status and its treatment can shape the neonatal nutritional environment, potentially influencing early metabolic programming. Full article
(This article belongs to the Section Proteins and Amino Acids)
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26 pages, 2043 KB  
Article
Kinetic and Thermodynamic Study of Vacuum Residue Cracking over Cerium-Modified Metakaolinite Catalyst
by Osamah Basil Al-Ameri, Mohammed Alzuhairi, Zaidoon Shakor, Esther Bailón-García, Francisco Carrasco-Marín and Juan Amaro-Gahete
Processes 2025, 13(10), 3126; https://doi.org/10.3390/pr13103126 - 29 Sep 2025
Abstract
Catalytic upgrading of vacuum residue (VR) is critical for enhancing fuel yield and reducing waste in petroleum refining. This study explores VR cracking over a novel cerium-loaded acidified metakaolinite catalyst (MKA800–20%Ce) prepared via calcination at 800 °C, acid leaching, and wet impregnation with [...] Read more.
Catalytic upgrading of vacuum residue (VR) is critical for enhancing fuel yield and reducing waste in petroleum refining. This study explores VR cracking over a novel cerium-loaded acidified metakaolinite catalyst (MKA800–20%Ce) prepared via calcination at 800 °C, acid leaching, and wet impregnation with 20 wt.% Ce. The catalyst was characterized using FTIR, BET, XRD, TGA, and GC–MS to assess structural, textural, and thermal properties. Catalytic cracking was carried out in a fixed-bed batch reactor at 350 °C, 400 °C, and 450 °C. The MKA800@Ce20% catalyst showed excellent thermal stability and surface activity, especially at higher temperatures. At 450 °C, the catalyst yielded approximately 11.72 g of total liquid product per 20 g of VR (representing a ~61% yield), with ~3.81 g of coke (~19.1%) and the rest as gaseous products (~19.2%). GC-MS analysis revealed enhanced production of light naphtha (LN), heavy naphtha (HN), and kerosene in the 400–450 °C range, with a clear temperature-dependent shift in product distribution. Structural analysis confirmed that cerium incorporation enhanced surface acidity, redox activity, and thermal stability, promoting deeper cracking and better product selectivity. Kinetics were investigated using an eight-lump first-order model comprising 28 reactions, with kinetic parameters optimized through a genetic algorithm implemented in MATLAB. The model demonstrated strong predictive accuracy taking into account the mean relative error (MRE = 9.64%) and the mean absolute error (MAE = 0.015) [MAE: It is the absolute difference between experimental and predicted values; MAE is dimensionless (reported simply as a number, not %. MRE is relative to the experimental value; it is usually expressed as a percentage (%)] across multiple operating conditions. The above findings highlight the potential of Ce-modified kaolinite-based catalysts for efficient atmospheric pressure VR upgrading and provide validated kinetic parameters for process optimization. Full article
(This article belongs to the Special Issue Biomass Pyrolysis Characterization and Energy Utilization)
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