Search Results (108)

The paper presents the synthesis of new naphthyl-containing derivatives of thiosemicarbazide and thiourea, their water-soluble inclusion complexes with β-cyclodextrin, as well as an assessment of their potential antiviral and hemorheological activity. As a criterion for the specific antiviral effect of new compounds, their chemotherapeutic indices were calculated using predictive analytics tools driven by artificial intelligence and molecular docking methods. Molecular docking studies with three protein targets PknB (2FUM), DprE1 (6HEZ), and InhA (1ENY) confirmed strong and specific ligand–protein interactions. The effects of structural features of new compounds on the rheological characteristics of blood were considered, and the most promising samples were identified for further in-depth in vitro study of their specific biological activity. The performed thermoanalytical study showed that the structure of the included ligand, as well as the shape of the receptor, significantly affect the thermal stability and kinetic parameters of the decomposition of the inclusion complex. In silico evaluation of the newly synthesized compounds revealed promising biological activity profiles, with all compounds demonstrating predicted antimycobacterial and antituberculosis potential. In silico analysis of the newly synthesized compounds revealed favorable biological activity profiles, with all candidates demonstrating predicted antimycobacterial and antituberculosis potential. Full article

Fusarium verticillioides is a common pathogenic fungus of corn since it causes severe yield losses and produces mycotoxins to threaten the health of both humans and livestock. Although extensive research has characterized specific genetic and environmental factors influencing mycotoxin production, a systematic understanding of the temporal transcriptional dynamics governing its developmental progression remains lacking. This study addresses this critical knowledge gap through a time-series transcriptomic analysis of F. verticillioides at four key cultivation stages (3, 5, 7, and 9 days post-inoculation). Transcriptomic analysis identified 1928, 2818, and 1934 differentially expressed genes (DEGs) in the comparisons of FV3 vs. FV5, FV5 vs. FV7, and FV7 vs. FV9, respectively. Gene Ontology enrichment revealed 76, 106, and 56 significantly enriched terms across these comparisons, with “integral component of membrane” consistently being the most enriched cellular component. Pathway analysis demonstrated “amino acid metabolism” and “carbohydrate metabolism” as the most significantly enriched metabolic pathways. Notably, the fumonisin (FUM) and fusaric acid (FA) biosynthetic gene clusters exhibited coordinated peak expression during the early cultivation, followed by progressive decline. Mfuzz clustering further delineated 12 distinct expression trajectories, highlighting the dynamic transcriptional networks underlying fungal adaptation. This work provided the first comprehensive temporal transcriptome of F. verticillioides, establishing a foundational resource for understanding its stage-specific biology and revealing potential time-sensitive targets for future intervention strategies. Full article

Fusarium verticillioides (F. verticillioides) is an important fungal pathogen known to infect a variety of economically critical crops, particularly maize, causing substantial yield reductions and economic losses worldwide. In addition to its direct damage to agricultural productivity, F. verticillioides threatens public health by producing/secreting potent compounds, including well-known fumonisins (FUMs), which pose significant health threats to both livestock and humans due to their toxicity and carcinogenicity. However, current knowledge of the materials secreted/produced by F. verticillioides, such as secreted proteins and additional secondary metabolites, remains limited. In the present study, we conducted an integrated secretome analysis of F. verticillioides at the exponential growth stage by using proteomic and metabolomic technologies. The results of the present study showed that proteomic analysis identified 185 proteins, including 138 fungus-specific proteins. GO enrichment of these 138 fungus-specific proteins yielded 24 significant terms spanning carbohydrate/polysaccharide and aminoglycan metabolic/catabolic processes, extracellular and membrane-anchored components, and hydrolase/peptidase activities. Meanwhile, KEGG analysis identified starch and sucrose metabolism as the sole significantly enriched pathway. Metabolomic analysis of medium supernatant showed that a total of 2352 metabolites were identified, with 110 unique to the medium supernatant of the fungal group, including fumonisins (A1, B2, B3, B4), fatty acids, and other bioactive compounds. KEGG pathway enrichment highlighted key metabolic pathways, including the TCA cycle, unsaturated fatty acid biosynthesis, and arachidonic acid metabolism. These findings provide new insights into the pathogenic mechanisms of F. verticillioides, suggesting candidates for virulence-associated functions and metabolic adaptations that potentially contribute to its pathogenicity. Full article

The present study demonstrates encapsulation of Coriandrum sativum essential oil in chitosan nanoemulsion and its effectiveness against fungal infestation and fumonisin B₁ (FB₁)- and B₂ (FB₂)-mediated biodeterioration of stored rice samples. Mycoflora analysis of different rice varieties revealed fungal occurrence and Fusarium proliferatum-BRC-R2 as the most toxigenic strain with highest FB₁- and FB₂-producing potentiality. GC-MS analysis of Coriandrum sativum essential oil (CEO) revealed linalool as the major component. The CEO-loaded chitosan nanoemulsion (Ne-CEO) was characterized by Scanning electron microscopy, X-ray diffractometry, Dynamic light scattering, and Fourier transform infrared spectroscopy. The Ne-CEO showed better antifungal and anti-fumonisin effectiveness as compared to unencapsulated CEO. The antifungal mechanism was associated with reduced ergosterol content, efflux of ions, proteins, nucleic acids, and destruction of plasma membrane integrity. The in silico interaction of linalool with Fum 1 protein confirmed the molecular action of anti-fumonisin activity. Additionally, the Ne-CEO displayed improved antioxidant activity and promising antifungal and anti-fumonisin activity during in situ investigation in rice samples (Gobindobhog variety) along with inhibition of the deterioration of carbohydrate, protein content, and lipid peroxidation without altering organoleptic properties and seed germination potentiality. Overall, the investigation strengthens the potentiality of Ne-CEO as a novel preservative of stored food commodities. Full article

Aflatoxins (AFs) and fumonisins (FUMs) are among the most prevalent and toxic mycotoxins affecting maize production globally. In Mexico, their co-occurrence poses a significant public health concern, as maize is not only a dietary staple but also predominantly grown and consumed at the household level. This review examines the multifactorial nature of AFs and FUMs contamination in Mexican maize systems, considering the roles of maize germplasm, agricultural practices, environmental conditions, and soil microbiota. Maize landraces, well-adapted to diverse agroecological zones, exhibit potential resistance to AFs contamination and should be prioritized in breeding programs. Sustainable agricultural practices and biocontrol strategies, including the use of atoxigenic Aspergillus flavus strains, are presented as promising interventions. Environmental factors and soil characteristics further influence fungal proliferation and mycotoxin biosynthesis. Advances in microbiome engineering, biological breeding approaches, and predictive modeling offer novel opportunities for prevention and control. The synergistic toxicity of AFs and FUMs significantly increases health risks, particularly for liver cancer, highlighting the urgency of integrated mitigation strategies. While Mexico has regulatory limits for AFs, the lack of legal thresholds for FUMs remains a critical gap in food safety legislation. This comprehensive review underscores the need for biomarker-based exposure assessments and coordinated national policies, alongside multidisciplinary strategies to reduce mycotoxin exposure and enhance food safety in maize systems. Full article

One-dimensional (1D) nanowires represent a critical class of nanomaterials with extensive applications in biosensing, biomedicine, bioelectronics, and energy harvesting. In materials science, accurately extracting their morphological and structural features is essential for effective image segmentation. However, 1D nanowires frequently appear in dispersed or entangled configurations, often with blurred backgrounds and indistinct boundaries, which significantly complicates the segmentation process. Traditional threshold-based methods struggle to segment these structurally complex nanowires with high precision. To address this challenge, we propose a wavelet-based Bilateral Segmentation Network named WaveBiSeNet, to which a Dual Wavelet Convolution Module (DWCM) and a Flexible Upsampling Module (FUM) are introduced to enhance feature representation and improve segmentation accuracy. In this study, we benchmarked WaveBiSeNet against ten segmentation models on a peptide nanowire image dataset. Experimental results demonstrate that WaveBiSeNet achieves, mIoU of 77.59%, an accuracy of 89.95%, an F1 score of 87.22%, and a Kappa coefficient of 74.13%, respectively. Compared to other advanced models, our proposed model achieves better segmentation performance. These findings demonstrate that WaveBiSeNet is an end-to-end deep segmentation network capable of accurately analyzing complex 1D nanowire structures. Full article

Fusarium verticillioides, an important global pathogenic fungus, compromises crop quality and yield by infecting maize, sugarcane, and some Solanaceae, endangering food security through contaminated grains and cereals with the fumonisin B1 (FB1) toxin. While Con7 has been reported as a transcription factor involved in the sporulation and pathogenicity of some pathogenic fungi, the function of FvCon7 and its regulatory genes in F. verticillioides remains uncharacterized. Gene deletion mutants of ΔFvcon7 were constructed through homologous recombination, which exhibited defects in vegetative growth, survival, sporophore development, conidiation, conidial germination, and carbon metabolism. Carbon metabolism defects led to a significant accumulation of glycogen granules in hypha and lipid bodies in conidia. Additionally, ΔFvcon7 displayed impaired cell wall structure and integrity, along with an altered expression of genes encoding cell wall-degrading enzymes (such as chitinase), as detected by qRT-PCR. Moreover, Fvcon7 also plays a role in the pathogenicity of maize and sugarcane through different splicing, defective conidia, reduced survival viability, differential expression of secreted proteins, and deficiencies in antioxidant stress capacity. Furthermore, using yeast one-hybrid (Y1H) assays, FvCon7 was found for the first time to directly regulate the expression of FvFUMs by binding to the CCAAT box within the promoters of six key FvFUMs, thereby affecting FB1 production. Overall, FvCon7 functions as a global transcription factor regulating multiple phenotypes. This study provides a theoretical basis for elucidating the mechanism of transcription factor FvCon7 regulating toxin production and pathogenesis in F. verticillioides. Full article

Fusarium spp. represent a critical threat to maize production and food safety due to their mycotoxin production. This study introduces a refined molecular identification protocol integrating four genomic regions—ITS1, IGS, TEF-1α, and β-TUB—for robust species differentiation of Fusarium spp. isolates from post-harvest maize in Bulgaria. The protocol enhances species resolution, especially for closely related taxa within the Fusarium fujikuroi species complex (FFSC). A newly optimized multiplex PCR strategy was developed using three primer sets, each designed to co-amplify a specific pair of toxigenic genes: fum6/fum8, tri5/tri6, and tri5/zea2. Although all five genes were analyzed, they were detected through separate two-target reactions, not in a single multiplex tube. Among 17 identified isolates, F. proliferatum (52.9%) dominated, followed by F. verticillioides, F. oxysporum, F. fujikuroi, and F. subglutinans. All isolates harbored at least one toxin biosynthesis gene, with 18% co-harboring genes for both fumonisins and zearalenone. This dual-protocol approach enhances diagnostic precision and supports targeted mycotoxin risk management strategies. Full article

Maize is one of the most important agricultural crops that has been cultivated in the Republic of Croatia for centuries. Fusarium mycotoxins as secondary metabolites of molds that naturally contaminate maize crops can have negative effects on human and animal health, but also on economic aspects. The aim of this study was to monitor the trend of natural occurrence of Fusarium mycotoxins in maize crops from Croatia during a period of 10 years, from 2014 to 2024. A total of 1285 maize samples were analyzed for the contents of zearalenone (ZEN), deoxynivalenol (DON), fumonisins B (FUM) and T-2/HT-2 toxin (T-2/HT-2) using validated ELISA methods. A high occurrence of the analyzed mycotoxins was found in all years examined, e.g., for ZEN 15–64%, DON 47–95%, FUM 60–96% and T-2/HT-2 24–89%. In addition, their concentrations ranged from 3.2–10,990 μg/kg, 18–25,000 μg/kg, 29–18,180 μg/kg and 9–595 μg/kg, respectively. The mycotoxin concentrations were found to differ from year to year, with an increasing trend observed for FUM and T-2/HT-2 in terms of concentrations and an increasing trend in the occurrence of all mycotoxins, with the exception of T-2/HT-2. Full article

Fumarase plays a pivotal role in the tricarboxylic acid cycle, but its functions in plant pathogenic fungi are not well understood. We identified two fumarase genes in Fusarium proliferatum and generated individual deletion mutants. Loss of FpFumB led to defects in growth, sporulation, stress tolerance, and virulence. Exogenous malate supplementation restored growth defects. Site-directed mutagenesis of residues G452 and A463 reduced FpFumB enzyme activity. Transcriptomic analysis identified significant changes in gene expression related to different metabolic pathways. Protein interaction assays showed that FpFumB interacts with the DNA repair protein FpSae2. Both ΔFpFumB and ΔFpSae2 mutants displayed altered sensitivity to DNA-damaging agents and reduced virulence, indicating that FpFumB modulates DNA repair and pathogenicity through its interaction with FpSae2. Together, these findings highlight FpFumB as a key regulator of basic biological processes, DNA damage repair, and virulence in Fusarium proliferatum. Full article

Background: Neisseria meningitidis (N. meningitidis) is a leading cause of acute meningitis and is classified into 13 serogroups, six of which are predominantly associated with invasive meningococcal disease. This study aimed to investigate the genotype, subgenotype, and antigenic profiles of N. meningitidis serogroup B strains isolated in Vietnam. Methods: Genotyping was performed on 106 N. meningitidis strains isolated from clinical samples from Vietnamese patients and nasopharyngeal swabs of healthy adolescents between 2019 and 2024. The genetic profiles, including the porA, porB, fetA, fHbp, abcZ, adk, aroE, fumC, gdh, pdhC, and pgm genes, were analyzed using Sanger sequencing and bioinformatic methods. Results: We found that 84.9% of the strains carried VR3 families 36 or 35-1, with VR1, VR2, and VR3 families 22-25, 14, and 36 being the most prevalent. Among the 106 serogroup B isolates, 20 variants of the porB allele 3 were identified, with porB 3-1212 being the most frequent (30.2%). Dominant PorB variable loops included L1.6, L4.5, L5.7, L6.6, and L7.13. fHbp variant group 2 was predominant (104/106 strains), and 12 FetA allele variants were identified, with F1-7 being the most common (47.2%). Three clonal complexes were identified, and clonal complex ST-32 was the most predominant. Fifty-five strains (51.9%) belonged to sequence types that have not yet been assigned to any clonal complexes, and 15 strains (14.1%) with allelic profiles were not assigned to STs. The 3-253 and 3-1212 alleles of porB, the F1-7 variant of FetA, the ST-44 and ST-1576 sequence types, and the ST-41/44 complex were observed more frequently in patients compared to asymptomatic carriers, suggesting their association with more virulence. Conclusions: This study showed a high genetic and antigenic diversity of N. meningitidis serogroup B isolates in Vietnam, with VR3 family 36 most common and porB 3-1212 as the predominant allele. fHbp variant group 2 and FetA allele F1-7 were most frequent. ST-32 was the dominant clonal complex, though many strains remained unassigned, highlighting the need for ongoing molecular surveillance. Full article

Fumonisins are polyketide-derived mycotoxins posing significant health threats to humans and animals. Among these, fumonisin B₁ (FB₁) is the most prevalent mycotoxin, primarily produced by Fusarium verticillioides, especially in maize and its derived products. Tangeretin, a polymethoxyflavonoid, has been identified as having potential medicinal properties, particularly as an antioxidant. To evaluate the antifungal and anti-mycotoxigenic properties of tangeretin and to elucidate the mechanisms underlying its inhibitory effects, assessments of fungal growth, FB₁ production, conidial germination, and cellulase activity, antioxidant capacity and enzyme activities, transcriptomic analysis and gene deletion experiments were conducted. Consequently, tangeretin significantly curtailed fungal growth and FB₁ production and provided protection against pathogenic infection on corn. It affected genes associated with fungal growth, conidial development, and antioxidant response. Furthermore, tangeretin interfered with the supply of biosynthetic substrate necessary for fumonisin production, particularly impacting pathways involved in alanine metabolism, pyruvate metabolism, fatty acid degradation, and sphingolipid metabolism. Notably, tangeretin downregulated four biosynthetic genes (Fum2, Fum3, Fum10 and Fum11) that are involved in the final steps of fumonisin formation. It likely disrupted the MAPK signaling pathway and targeted a putative NmrA- and HSCARG-like protein Fv_Tan1, which was identified as having positive effects on fungal growth and mycotoxin biosynthesis. This study presents a promising approach for controlling fumonisin contamination in agricultural settings. Full article

Acetic acid, a common weak acid in industrial fermentation processes, occurs naturally in lignocellulosic hydrolysates and is a byproduct of microbial metabolism. As a significant environmental stressor, it triggers the expression of multiple genes involved in various cellular responses, including biological processes, cellular components, and molecular functions. Using the acid-tolerant strain Pichia kudriavzevii PkAC-9, developed through adaptive laboratory evolution under acetic acid stress, we conducted a transcriptional analysis of 70 stress response-associated genes. RT-qPCR analysis revealed significant upregulation of several genes compared with the wild-type strain under acetic acid stress conditions. The most dramatic changes occurred in genes encoding key metabolic enzymes and stress response proteins associated with the TCA cycle (Fum: 18.6-fold, Aco: 17.1-fold, Oxo: 9.0-fold), carbon and energy metabolism (Tdh2: 28.0-fold, Erg2: 2.0-fold), electron transport chain (Gst: 10.6-fold), molecular chaperones (Hsp104: 26.9-fold, Hsp70: 13.0-fold, Sgt2: 10.0-fold), and transcriptional activators. Our findings indicate that the enhanced acetic acid tolerance of P. kudriavzevii PkAC-9 primarily depends on the coordinated upregulation of genes involved in energy metabolism, cellular detoxification mechanisms, and protein quality control systems through heat shock and transcriptional activator proteins. Full article

A whole-genome shotgun sequencing (sWGS) approach was applied to chicken clinical tracheal swab samples during metagenomics investigations to identify possible microorganisms among poultry with respiratory diseases. After applying shotgun sequencing, Ornithobacterium rhinotracheale (ORT) and a putative prophage candidate were found in one of the swab samples. A multi-locus sequence typing (MLST) scheme of the ORT genome involved the adk, aroE, fumC, gdhA, pgi, and pmi genes. Antibiotic resistant analysis demonstrated tetracycline-resistan t ribosomal protection protein, tetQ, the aminoglycoside-(3)-acetyltransferase IV gene, aminoglycoside antibiotic inactivation and macrolide resistance, and the ermX gene in the ORT genome. A putative prophage candidate was predicted using Prophage Hunter and PHAST, while BLAST analyses were utilized to identify genes encoding bacteriophage proteins. Interestingly, genes encoding endolysins were detected in bacteriophage genomes. The gene products encoded in the prophage sequence were most closely related to bacteriophages in the N4-like family among the Authographiviridae in the Caudovirales. This study demonstrates the potential of sWGS for the rapid detection and characterization of etiologic agents found in clinical samples. Full article

Mycotoxins are secondary metabolites of filamentous fungi that cause massive agricultural losses worldwide and constitute a significant health problem for humans and animals. The aim of this five-year study was to investigate the contamination of compound feed for broiler chickens at all stages (starter, grower and finisher) from a feed mill in Romania with mycotoxins such as total aflatoxins (AFT), deoxynivalenol (DON), fumonisins (FUMs), ochratoxin A (OTA) and zearalenone (ZEN). AFT was detected in 49.3–72.2% of the samples with concentrations ranging from 0.01 to 5.2 µg/kg. DON was detected in 77.6–98.9% of the samples, with maximum concentrations ranging from 330 to 1740 µg/kg. FUM contamination ranged from 42.7% to 87.2%, with maximum levels between 460 and 1400 µg/kg. OTA was present in 44.2–87.9% of the samples, with maximum concentrations reaching 21.4 µg/kg. ZEN was consistently elevated at all feeding stages, being detected in 86.5–97.4% of the samples, with maximum levels of 89.4 µg/kg. Mycotoxin co-occurrence was common in the samples, with the most common combination of four mycotoxins occurring in 38.51% of the samples. Samples were collected from storage bunkers, homogenised and analysed in certified laboratories, with sampling procedures varying according to batch size to ensure representativeness. Investigation of the transfer of mycotoxins into animal products and the combined effects of mycotoxins on animal health, including potential synergistic or antagonistic interactions, is particularly relevant. This study emphasises the essential role of comprehensive and continuous monitoring of mycotoxins in protecting animal health and food safety. Full article