Search Results (297)

Cacti thrive in arid and coastal environments partly through associations with beneficial endophytic and rhizosphere bacteria; however, current knowledge remains limited. This study aimed to assess the diversity of cultivable bacteria associated with Opuntia dillenii and evaluate their potential as Plant Growth-Promoting (PGP) agents. Endophytic bacteria were isolated from cladodes and roots, while rhizobacteria were recovered from rhizosphere soil. Bacterial isolates were identified using morphological characteristics and 16S rRNA/gyrB sequencing, followed by screening for PGP traits, pH and temperature tolerance. A total of 31 isolates were obtained, including 23 endophytes and 8 rhizobacteria, mainly affiliated with Firmicutes, Actinobacteria, and Proteobacteria. Bacillus (35.48%) and Priestia (32.25%) predominated, with Priestia flexa as the most prevalent species. The most frequent PGP traits were phosphate solubilization (80.65%), proteolytic activity (70.97%), siderophore production (67.74%), and nitrogenase activity (64.52%). The highest phosphate solubilization indices were observed for strain R3 (3.41), R6 (3.39) and S6 (3.21), whilst the highest indole-3-acetic acid yields were recorded for C9 (172.88 µg/mL), R11 (96.22 µg/mL) and C3 (90.94 µg/mL), and the strongest siderophore production for C3 (30.37 mm), C7 (27.96 mm) and S7 (27.88 mm). These findings highlight O. dillenii-associated coastal bacteria as promising resources for plant growth and plant stress resilience. Full article

Understanding how irrigation water management shapes crop performance is critical for improving productivity and resource-use efficiency in peri-urban agriculture. This study investigated the socio-technical factors driving sprinkler system abandonment and assessed how irrigation water variability influences vegetable yield variability at two market gardening sites (Bogdin and 14 Yaar) in Ouagadougou, Burkina Faso. Survey data from 50 farmers and field measurements of soil properties, irrigation water application, and lettuce yield were analyzed using descriptive statistics, Spearman correlations, and principal component analysis. More than 80% of farmers had ceased using the sprinkler system within two years of installation, 76% reported major equipment failures, and 70% expressed willingness to re-adopt an improved system. Irrigation dose and yield showed considerable variability across sites (CV = 20.9–42.3% and 36.4–44.0%, respectively). At 14 Yaar, irrigation dose was strongly associated with yield (r = 0.862, p = 0.006), indicating that uneven water application was a major constraint on productivity. At Bogdin, where irrigation was more uniform, no single soil or water variable dominated yield variability. Although soil fertility variables contributed to multivariate patterns, nutrient–yield correlations were not statistically significant under the available sample size, and their potential influence on yield requires confirmation with larger datasets. Overall, operational constraints, equipment failures, and inadequate support services contributed to sprinkler system abandonment, while variability in manual water application was associated with variability in crop productivity. These findings highlight the need for irrigation strategies that are both technically robust and adapted to farmers’ realities. Full article

Water resource management in the Sahelian-Sudanian transition zone faces growing uncertainty under climate change, yet hydrological projections remain scarce for the Oti-Pendjari basin (West Africa). This study develops an integrated modelling chain combining CMIP6 multi-model evaluation, bias correction, and GR4J hydrological modelling to project streamflow changes under SSP2-4.5 and SSP5-8.5 over 2021–2100. Eleven CMIP6 models were evaluated against ERA5 reanalysis data (1960–2014) using NSE, KGE, and MAE; the three best-performing models were bias-corrected using Linear Scaling, Variance Scaling, Quantile Mapping, and Quantile Delta Mapping. Linear Scaling proved most effective, with CMCC-ESM2 best reproducing observed precipitation (NSE and KGE up to 0.9), while the multi-model approach performed best for temperature. The GR4J model, calibrated at Porga, Mandouri, and Mango (KGE: 0.609–0.668), satisfactorily reproduces intermediate flows and flood dynamics, although structural limitations persist for low flows (KGE [1/Q]: −0.65 to −0.71). Projections reveal a marked divergence between scenarios: SSP2-4.5 yields September peak flow increases of +5.7% to +16.7%, whereas SSP5-8.5 leads to slight decreases of −1.1% to −3.6%, likely driven by increased potential evapotranspiration partially offsetting precipitation gains. These findings underscore the critical importance of scenario selection and model uncertainty in regional water resource planning. Full article

Background: Diabetes mellitus remains a major public health concern, particularly in sub-Saharan Africa where type 2 diabetes predominates. In West Africa, Uvaria chamae P. Beauv. is traditionally used for diabetes management. This study investigates previously reported metabolites from Uvaria chamae using an integrated in silico approach to explore their potential antidiabetic activity and underlying mechanisms. Methods: A comprehensive literature survey identified 106 phytochemicals from stems, roots, leaves, and seeds. Diabetes-related protein targets were retrieved from the RCSB Protein Data Bank, while ligand structures were obtained from PubChem and the COCONUT database. Molecular docking, MM-GBSA rescoring, induced-fit docking, QSAR, and ADMET analyses were performed to evaluate interaction profiles, predicted activity, and developability. Results: The integrated analysis supports a polypharmacological mixture-based profile with organ-associated trends. Stem- and root-derived flavonoids, particularly isouvaretin and diuvaretin, showed the most consistent profiles for PPARγ-related pathways, while uvarinol was associated with PTP1B. Leaf alkaloids were mainly linked to DPP-4 and digestive enzyme inhibition. These compounds displayed more favorable predicted pharmacokinetic and toxicity profiles compared to acetogenins, which, despite favorable binding energies, were not prioritized as drug-like candidates due to their high lipophilicity, low QED values, and predicted toxicity liabilities, but may contribute to extract-level activity. Conclusion: These findings provide a hypothesis-generating and hierarchical framework for the prioritization of Uvaria chamae metabolites and extracts, supporting further experimental validation through enzymatic, cellular, and gene expression studies. Full article

The activated sludge process serves as the core barrier in pharmaceutical wastewater treatment, yet its stability is inherently challenged by the extreme complexity of influent composition and the unpredictability of toxic shocks, particularly under contract development and manufacturing organization (CDMO) operations. Current biotoxicity assessment methods face inherent trade-offs among timeliness, specificity, and matrix robustness, resulting in fragmented, reactive management that lacks predictive capacity. In response, this review critically synthesizes evidence on toxicity pathways and monitoring technologies, systematically evaluating their mechanistic basis and engineering applicability. Building on these findings, we propose a conceptual perception–cognition–response architecture that structures decision-making across three adaptive tiers: (i) a perception layer that tolerates false positives for rapid anomaly detection; (ii) a cognition layer that requires effect-based biological verification; and (iii) a response layer that authorizes resilience-oriented interventions. Rather than a linear pipeline, the three tiers form an adaptive feedback cycle that dynamically aligns monitoring intensity, verification depth, and response authority with real-time risk gradients and site-specific constraints. By explicitly linking biological mechanisms to assessment limitations and tiered decision rules, this review provides a hypothesis-generating roadmap that orients biotoxicity management from episodic, composition-based assessment toward adaptive, effect-driven control. The proposed framework is intended to guide future pilot validation, multi-sensor integration, and context-specific calibration, offering a unified narrative for advancing proactive biotoxicity control in complex pharmaceutical wastewater systems. Full article

Rapid urbanization and population growth in West Africa are intensifying pressure on natural resources and reconfiguring telecoupled supply chains, especially for essential household fuels like charcoal and firewood, here collectively referred to as woodfuel, that link urban consumers to distant production landscapes. However, these cross-regional linkages remain poorly understood. This study, therefore, investigates how urban dynamics structure telecoupled woodfuel flows in Benin, based on quantitative and qualitative surveys of roadside charcoal and firewood traders along the country’s major long-distance roads RNIE#2 and RNIE#3. Collected data included sources, destinations, quantities, pricing, and organizational aspects, combined into a system analysis of fuelwood trading across sending, receiving, and corridor (spillover) areas. Results show consumers growing reliance on charcoal, which in our study amounted to 35,770 t year⁻¹ (97% of the total surveyed flow) to urban areas. Roadside trading depends heavily on connectivity, traffic, and regional trade links, with RNIE#2 emerging as the main corridor, channeling 30,960 t year⁻¹ (84% of the total surveyed flow). Contrary to assumptions that woodfuel sources reflect vegetation density, distances to reported sources were short, with supply shadows averaging 11.3 km (SD = 14.5). Urban demand shapes woodfuel flows by concentrating most trade in major cities—especially the Cotonou–Porto-Novo area, which received 83% (28,770 t year⁻¹) of charcoal and 84% (850 t year⁻¹) of firewood traded along the surveyed flow axes of Benin, with market reach distances varying between 1 and 390 km. Full article

Toxoplasmosis is a widely distributed zoonosis caused by the protozoan parasite Toxoplasma gondii. Infection during pregnancy is a major public health concern due to its potential impact on both maternal health and fetal development. Early detection of maternal infection is critical to prevent adverse outcomes; however, maternal signs are often subtle, non-specific or absent, complicating timely diagnosis. This scoping review aimed to map and synthesise existing evidence on early maternal signs, pregnancy and foetal outcomes, frequently assessed risk factors, and diagnostic approaches of toxoplasmosis in expectant mothers in Africa. The review was done in accordance with the PRISMA-ScR guidelines. A literature search of PubMed, Scopus, ResearchGate, and Google Scholar was performed to identify studies published between 2000 and 2025. Retrieved records were managed using Zotero (version 8.0.4) for deduplication and screening. Only English-language studies conducted in Africa and reporting relevant maternal or clinical data were included. A total of 28 cross-sectional studies were included. Lymphadenopathy (25.0%) was the most frequently reported maternal early sign, followed by flu-like illness, asymptomatic infection, low-grade or mild fever, and fatigue or malaise (each 10.7%). Congenital anomalies (50.0%) and miscarriage or spontaneous abortion (42.9%) were the most commonly reported foetal and pregnancy outcomes. Frequently reported risk factors were exposure to cat faeces (57.1%) and ingestion of undercooked or raw meat (42.9%). Diagnostic approaches were commonly enzyme-based immunoassays (78.6%), with limited use of RDTs and molecular methods. These findings suggest the need for improved early detection and prevention strategies in high-risk, low-resource African settings. Enhancing routine screening, health education, and access to appropriate diagnostics are considered. Future studies should consider adopting standardised reporting and integrating sensitive, affordable, rapid diagnostic approaches to enhance early detection and reduce the burden of congenital toxoplasmosis. Full article

Marine-derived natural products are increasingly recognized for their therapeutic potential in cancer and other chronic diseases. Despite significant advances, current cancer treatments remain challenged by toxicity, drug resistance, and limited survival benefits. Natural compounds offer promising alternatives due to their multi-target mechanisms and favorable safety profiles. Among them, Spirulina, a filamentous cyanobacterium, stands out for its rich composition and diverse biological activities. Its anticancer effects involve apoptosis induction via intrinsic and extrinsic pathways, cell cycle arrest at G1/S or G2/M phases, inhibition of angiogenesis through the VEGF/VEGFR2 axis, and suppression of epithelial–mesenchymal transition. These activities are mainly attributed to C-phycocyanin, allophycocyanin, phenolic compounds, and immunomodulatory polysaccharides. Spirulina also exhibits potent immunomodulatory effects by enhancing natural killer cell activity, promoting M1 macrophage polarization, and regulating Th1 and Th17 cytokine responses, highlighting its potential as both an immunotherapeutic and chemoprotective agent. Moreover, preclinical findings suggest it may reduce chemotherapy-associated side effects. However, translation into clinical therapy remains limited by low bioavailability, lack of standardized extracts, and scarce clinical evidence. This review summarizes current mechanistic and immunological insights and highlights the need for optimized formulations, defined dosing strategies, and well-designed clinical trials to validate Spirulina’s potential in cancer treatment. Full article

The accumulation of microplastics (MPs) in agricultural soils and atrazine in agricultural soils creates compound pollution that severely threatens soil health. The present study aimed to evaluate the effect of polyethylene (PE), polyvinyl chloride (PVC), and polybutylene succinate (PBS) on the adsorption and degradation of atrazine in yellow-brown and black soil. Batch adsorption kinetic and isotherm experiments were conducted in two distinct soils amended with MPs. A 90-day degradation experiment was performed to monitor atrazine persistence and the activities of key soil enzymes. The adsorption process was best described by the pseudo-second-order model and the Freundlich isotherm model, suggesting dominant chemisorption and multilayer adsorption on heterogeneous surfaces of the soil–MP composites. All MPs significantly enhanced the adsorption capacity for atrazine (6.80–39.93 mg kg⁻¹), with the order PBS > PE > PVC. Furthermore, the degradation of atrazine was impeded by all MPs, with PVC exhibiting the strongest inhibitory effect. The half-life of atrazine ranges from 22.97 to 81.76 days in two soils. The presence of MPs also influenced soil enzyme activities and the effects varied by MP type and soil property. These results demonstrate that MPs can modify the adsorption and persistence of atrazine in soil, thereby increasing its environmental risk. This study provides valuable insights for the long-term ecological risk assessment of co-existing MPs and pesticide pollution in terrestrial environments. Full article

Long-read sequencing technologies, particularly those developed by Oxford Nanopore Technologies (ONT), have transformed genome sequencing by enabling high-resolution analysis of complex microbial communities. Among ONT devices, the MinION remains affordable and scalable for low-resource settings. However, its limited onboard computing power constrains high-accuracy basecalling and limits its ability to address inherent sequencing errors effectively. To overcome these constraints, we assembled a streamlined in-house workflow that integrates at least five MinION devices with a GPU-powered workstation running Ubuntu 20 and MinKNOW. Rather than a new sequencing platform, this “home-made GridION” represents a practical integration of existing ONT devices with dedicated computing resources. At its core is a live basecalling pipeline capable of handling both FAST5 and POD5 file formats. The system supports high-throughput basecalling using Guppy on FAST5 files as well as Dorado on POD5 files, ensuring compatibility with both legacy and current ONT data standards. File monitoring is automated via inotifywait, enabling immediate detection of new files, real-time basecalling, and organized output of FASTQ batches. Beyond basecalling, we implemented an automated downstream pipeline for metagenomic analysis, enabling taxonomic profiling and detection of antimicrobial resistance genes (ARG). Tested on 10 hospital wastewater samples, the workflow generated at least 500,000 reads per sample within six hours, which were analysed for antimicrobial resistance gene abundance. This demonstrates its potential as an open, scalable hardware/software platform that extends the utility of MinION sequencing for microbial genomics in resource-limited environments. The setup can channel as many MinIONs as available USB ports, with a ratio of 1 MK1D for 1 TB of storage capacity on the associated computer. Full article

The longest-standing international treaty for wetland and waterbird protection, the Ramsar Convention has resulted in the establishment of more than 2500 protected areas covering over 2.5 million square kilometers around the world. However, its measures are not legally binding, and its effectiveness as a tool for wildlife conservation has rarely been quantitatively assessed. In Benin, West Africa, breeding waterbirds are subjected to intense hunting and egg harvesting for both commercial and subsistence purposes. We quantified count data of waterbirds and eggs taken by local hunters and trappers to assess the effectiveness of the Ramsar Convention as a wildlife conservation tool in southeastern Benin. During the six-month period between May and October 2022, 64 people reported harvesting a total of 12,053 breeding waterbirds and 63,987 eggs, comprising eight species in three families in Ramsar site 1018. Birds most heavily targeted included Allen’s Gallinule (Porphyrio alleni), with 4187 breeding birds taken (~35% of all birds captured), and the White-faced Whistling Duck (Dendrocygna viduata), with 24,491 eggs taken (~38% of all eggs taken) over the course of a single breeding season. The Eurasian Moorhen (Gallinula chloropus) and Lesser Moorhen (Paragallinula angulata) were the third and fourth most targeted bird species, respectively, followed by the African Swamphen (Porphyrio madagascariensis), Black Crake (Zapornia flavirostra), African Jacana (Actophilornis africanus), and African Crake (Cecropsis egregia). Captured waterbirds were sold live at local markets, while eggs were eaten by hunters, except eggs containing chicks, which were discarded. Our findings show heavy persecution of waterbirds during their breeding season, when nesting birds are especially vulnerable to human predation, on a scale that is likely unprecedented and threatens to drive declines of targeted species in Benin. As local residents do not currently appear to recognize any deterrents to the uncontrolled hunting of breeding waterbirds or the collection of eggs in Ramsar site 1018, there is an urgent need to better leverage the Ramsar Convention to enforce conservation practices in this region. Full article

Antimicrobial resistance (AMR) in foodborne pathogens poses a major public health risk in Benin. Table eggs and poultry sausages have been identified as potential reservoirs of resistant bacteria. Nevertheless, the lack of integrated AMR data from food and clinical sources limits the ability to assess public health risks and design evidence-based interventions. Therefore, this study aimed to determine the prevalence of Escherichia coli and Salmonella in table eggs and poultry sausages and to evaluate the antibiotic resistance profile of isolates from these foods and clinical samples alongside clinical isolates. A total of 135 table egg pools, 90 poultry sausages, and 81 clinical isolates of E. coli (56) and Salmonella (25) were collected between August and December 2023. Table eggs and poultry sausages were analysed for Escherichia coli and Salmonella using conventional methods. Antibiotic resistance (n = 99 isolates) was tested using Kirby–Bauer disc diffusion. Clinical isolates (n = 77) were included for comparison. High Escherichia coli prevalence (eggs: 59.3%, 95% CI: 50.9–67.3%; sausages: 14.4%, 95% CI: 8.6–23.2%) and lower Salmonella prevalence (eggs: 2.2%, 95% CI: 0.8–6.3%; sausages: 5.6%, 95% CI: 2.4–12.4%) were observed. According to antibiotic resistance data, predominant multidrug resistance to tetracyclines, streptomycin, and fluoroquinolones, followed by preserved sensitivity to nitrofurans and chloramphenicol, was noticed. These findings highlight the urgent need to regulate antibiotic use in Benin’s poultry and medical sectors. Full article

Maize is vital for food systems and rural livelihoods in the Democratic Republic of Congo (DRC). Continuous cultivation depletes soil nutrients, reducing maize production. Inorganic (or mineral) fertilizers provide nutrients rapidly, but their cost and sustainability concerns have prompted interest in alternatives. Biological amendments improve nutrient uptake and soil structure and boost crop resistance, potentially cutting mineral fertilizer use. The present study aims to investigate the direct and residual effects of biological amendments (BAs) on maize productivity in the Eastern DRC, both when applied alone or combined with inorganic fertilizer, with trials conducted in the Kabare, Kalehe, and Ruzizi Plain regions from October 2022 to June 2024. Two trials across four seasons gathered data using a randomized complete block design (RCBD) with nine treatments and three replicates: Control, without fertilizer application; farmer practice; inorganic fertilizer (NPK 17-17-17 and urea); BA_1: Lactobacillus; BA_2: fish serum; BA_3: black soldier fly (BSF) compost; BA_1 + inorganic fertilizer; BA_2 + inorganic fertilizer; and BA_3 + inorganic fertilizer. The results identified three categories: integrated organic and inorganic fertilizers, single applications, and inconsistent uses. The best outcomes emerged from treatments combining Lactobacillus, fish serum, and BSF compost with inorganic fertilizer, positively impacting maize yield parameters. The study confirms that combining biological amendments and mineral fertilizers significantly (p < 0.001) enhances maize productivity in the Eastern DRC. Performance differences across locations emphasize the influence of local soil characteristics and targeted nutrient strategies. Full article

Temperature and relative humidity can significantly affect quality of paddy rice during storage. Limited studies established the link between storage time, environmental fluctuations, changes in grain and flour physicochemical properties, and culinary performances. In a West African context, IR 841 paddy rice variety was stored under humid–sub-humid (HSH), and dry (DRY) conditions for 12 months. Over 12 months, rice stored under DRY conditions experienced greater environmental fluctuations than rice stored under HSH conditions. Grain water absorption capacity (WAC) increased during storage under DRY conditions, rising from 3.3 ± 0.3 to 3.8 ± 0.3 g/g DM between 0 and 12 months. Flour amylose content and soluble solids remained relatively stable from month 0 to 6 in all conditions, and further under HSH conditions. The observed changes led to improved grain cooking performance after 6 months of storage under DRY conditions. After 12 months, a decrease in rice flour WAC and a peak in viscosity were observed, while mean particle size increased from 42 ± 1 to 67 ± 3 μm under HSH conditions and from 31 ± 3 to 83 ± 3 μm under DRY conditions. Storage time may reduce the breadmaking capacity of rice flour. Overall, environmental fluctuations under DRY conditions strongly affected rice grain and flour properties. Full article

Background: The interaction between helminth and viral infections has important implications for understanding viral disease outcomes and vaccine efficacy in helminth-endemic regions. We previously demonstrated that helminth seropositivity is associated with reduced Th1/Th17 cytokine levels and reduced COVID-19 severity; however, the underlying immunological mechanisms remain unclear. This study further investigated these mechanisms by assessing how helminth antigens influence SARS-CoV-2-induced T-cell responses in individuals infected with filarial parasites in vitro. Methods: Peripheral blood mononuclear cells (PBMCs) from 43 participants, including Onchocerca volvulus-infected individuals, filarial lymphedema patients, and non-endemic controls, were stimulated in vitro with SARS-CoV-2 peptides and Ascaris lumbricoides antigens. Results: Fluorescence-activated cell sorting analysis showed a significant reduction in SARS-CoV-2-induced CD154 expression on CD4⁺ T cells but an increase on CD8⁺ T cells in O. volvulus-infected participants (p < 0.0001). A. lumbricoides antigens alone did not induce significant T-cell activation in O. volvulus-infected individuals. However, SARS-CoV-2 peptides strongly activated CD4⁺CD154⁺ T cells response (p = 0.0074), but co-stimulation with A. lumbricoides antigens markedly reduced CD3⁺ and CD4⁺CD154⁺ T-cell expression frequencies (p = 0.0329 and p = 0.0452). A. lumbricoides-specific IgG correlated inversely with SARS-CoV-2-induced CD4⁺CD154⁺ expression (r = −0.6025, p = 0.0049), whereas SARS-CoV-2-specific IgG was positively associated with CD4⁺CD154⁺ and CD8⁺CD154⁺ T-cell responses (β = 0.532, p = 0.016 and β = 0.509, p = 0.022). Conclusion: These findings demonstrate that helminth antigens modulate functional SARS-CoV-2-induced T-cell responses, offering a potential mechanism through which helminth co-infections shape antiviral immunity, vaccine efficacy, and clinical disease outcomes. Full article