Search Results (266)

This study identifies and classifies resistance gene analogues (RGAs) in the genomes of Brassica nigra, Sinapis arvensis and Sinapis alba using the RGAugury pipeline. RGAs were categorised into four main classes: receptor-like kinases (RLKs), receptor-like proteins (RLPs), nucleotide-binding leucine-rich repeat (NLR) proteins and transmembrane-coiled-coil (TM-CC) genes. A total of 4499 candidate RGAs were detected, with species-specific proportions. RLKs were the most abundant across all genomes, followed by TM-CCs and RLPs. The sub-classification of RLKs and RLPs identified LRR-RLKs, LRR-RLPs, LysM-RLKs, and LysM-RLPs. Atypical NLRs were more frequent than typical ones in all species. Atypical NLRs were more frequent than typical ones in all species. We explored the relationship between chromosome size and RGA count using regression analysis. In B. nigra and S. arvensis, larger chromosomes generally harboured more RGAs, while S. alba displayed the opposite trend. Exceptions were observed in all species, where some larger chromosomes contained fewer RGAs in B. nigra and S. arvensis, or more RGAs in S. alba. The distribution and density of RGAs across chromosomes were examined. RGA distribution was skewed towards chromosomal ends, with patterns differing across RGA types. Sequence hierarchical pairwise similarity analysis revealed distinct gene clusters, suggesting evolutionary relationships. The study also identified homologous genes among RGAs and non-RGAs in each species, providing insights into disease resistance mechanisms. Finally, RLKs and RLPs were co-localised with reported disease resistance loci in Brassica, indicating significant associations. Phylogenetic analysis of cloned RGAs and QTL-mapped RLKs and RLPs identified distinct clusters, enhancing our understanding of their evolutionary trajectories. These findings provide a comprehensive view of RGA diversity and genomics in these Brassicaceae species, providing valuable insights for future research in plant disease resistance and crop improvement. Full article

Spinal muscular atrophy (SMA) is a genetic neuromuscular disorder primarily affecting motor neurons. Emerging evidence suggests it also involves multiple organs, including potential cardiac manifestations. This study aimed to evaluate cardiac abnormalities in pediatric SMA patients compared to age-matched healthy controls, providing insight into underlying cardiomyopathy in this population. A total of 126 children were included in the study, with 63 SMA patients and 63 age-matched controls. We conducted clinical examinations, standard electrocardiography (ECG), and cardiac ultrasound (CUS) in all patients. Electrocardiographic analysis revealed a higher prevalence of sinus tachycardia in the SMA group and significantly deeper Q waves, indicating possible myocardial involvement. Echocardiographic findings demonstrated a significant reduction in left ventricular mass and left ventricular mass index in SMA patients compared to controls, despite normal systolic function. Statistical analysis confirmed that SMA diagnosis was an independent predictor of reduced myocardial mass, suggesting a distinct cardiac phenotype in SMA patients. This study provides new evidence of subclinical cardiac involvement in SMA, characterized by reduced myocardial mass, altered electrocardiographic parameters, and increased sinus tachycardia. These findings suggest a previously unrecognized form of cardiomyopathy in SMA that differs from cardiac manifestations typically seen in other neuromuscular disorders. Full article

Quinoa (Chenopodium quinoa) cultivation and consumption have been increasing globally for its nutritional value and agricultural adaptability, with over 120 countries involved in its production. In Canada, quinoa is cultivated as a specialty crop to increase crop diversity and support agroresilience. This study is the first to examine quinoa cultivars grown under northern Quebec conditions and to provide a nutritional and sensory characterization of two Quebec (Canada) varieties (Sweet and Bitter) in comparison to the Bolivian reference cultivar, Royal White. Analyses included proximate composition, amino acids, fatty acids, phenolics, and anti-nutrients. Sensory evaluations involved hedonic and bitterness ranking tests. Bolivian cultivar had higher omega-3 content, while the Quebec cultivars showed favorable protein and lipid profiles, with better lipid health indexes. Protein quality was comparable between the Bolivian and Sweet cultivars. The overall flavor appreciation was similar among twice-brushed Bitter cultivar and Bolivian samples. The Bolivian sample received a better score for texture. Descriptive flavor data support the development of a quinoa flavor lexicon. Notably, total saponins content, commonly used as a bitterness indicator, did not consistently correlate with perceived bitterness, emphasizing the need for a standardized quantification method for cultivar selection and further investigation into other flavor-contributing compounds. Full article

The strategy of active surveillance for papillary thyroid microcarcinoma (PTMC) is becoming increasingly popular within the global medical community. A key criterion for selecting this strategy is the absence of any signs of lymphogenic or distant metastases. The present study assessed the diagnostic accuracy of molecular genetic markers for predicting the metastatic potential of patients with PTMC. We evaluated the expression levels of 33 molecular genetic markers in cytology samples from 92 patients with PTMC and confirmed histological diagnosis. Among these patients, 32 had metastases to regional cervical lymph nodes. Our findings revealed the upregulated expression of the HMGA2, TIMP1, and FN1 genes, as well as microRNA-146b, in patients with metastatic PTMC. Conversely, we found the downregulated expression of miRNA-7 and -148b in metastatic tumors. In metastatic tumors, significant reductions were observed in DIO1 activity (11-fold), TFF3 gene expression (8-fold), TPO expression (4-fold), and SLC26A7 expression (2.6-fold). All the markers exhibited high sensitivity (84.5–90.6%) in detecting metastatic PTMC, although the specificity proved to be low. The use of molecular markers to predict lymphogenic metastatic spread in patients with PTMC could enhance existing risk grading systems. Such assessments can already be applicable at the preoperative stage. Full article

Alzheimer’s disease (AD) impacts more than half a million people worldwide, with no cure available. The regulatory approval of three anti-amyloid monoclonal antibodies (mAbs), including aducanumab, lecanemab, and donanemab, has established immunotherapy as a therapeutic approach to modify disease progression. Its multifactorial pathology, which involves amyloid-β (Aβ) plaques, tau neurofibrillary tangles, neuroinflammation, and cerebrovascular dysfunction, limits the efficacy of single-target therapies. The restricted blood–brain barrier (BBB) penetration and amyloid-related imaging abnormalities (ARIA), together with small treatment effects, demonstrate the necessity for advanced biologic therapies. Protein engineering advancements have created bispecific antibodies that bind to pathological proteins (e.g., Aβ, tau) and BBB shuttle receptors to boost brain delivery and dual therapeutic effects. This review combines existing information about antibody-based therapy in AD by focusing on bispecific antibody formats and their preclinical and clinical development, as well as biomarker-based patient selection and upcoming combination strategies. The combination of rationally designed bispecific antibodies with fluid and imaging biomarkers could show potential for overcoming existing therapeutic challenges and delivering significant clinical advantages. Full article

Plants have historically served as key sources of nutrition and popular medicine, which persists in current applications. The increasing demand for natural bioactive compounds has intensified the incorporation of plant-derived ingredients in both the food and pharmaceutical industries. This narrative review focuses on the fruits of Crataegus monogyna Jacq., Sorbus aria (L.) Crantz, and Prunus spinosa L. (Rosaceae), traditionally utilized in Europe and characterized by a high content of phenolic compounds, flavonoids, and anthocyanins. These metabolites are associated with antioxidant, anti-inflammatory, and cardioprotective properties. The available literature on their phytochemical profiles, biological activities, and integration into the Mediterranean Diet is critically assessed. Evidence supports their potential as functional food components. Despite encouraging in vitro results, the scarcity of in vivo and clinical studies limits the translational potential of these findings. Further research is warranted to validate their efficacy and safety in human health. This review underscores the value of integrating traditional ethnobotanical and ethnopharmacological knowledge with contemporary scientific research to explore novel applications of these underutilized wild fruits. Full article

Conjugated polymers (CPs) offer many attractive features for photodiodes and photovoltaics, including solution processability, ease of scale-up, light weight, low cost, and mechanical flexibility. CPs have a wide range of energy gaps; thus, the choice of the specific polymer determines the optimum operational wavelength range. However, there are relatively few CPs with a strong absorption in the blue region of the spectrum where the human eye is most sensitive (440 to 470 nm) and none with an energy gap at 2.75 eV (450 nm), which corresponds to the peak of the CIE-1931 z(λ) color-matching function and the dominant blue light emission wavelength in computer and smartphone displays. Blue-light detectors in this wavelength range are important for light hazard control, sky polarization studies, and for blue-light information devices, where 450 nm corresponds to the principal emission of GaN-based light sources. We report on a new CP called Atums Green (AG), which shows promising characteristics as a blue-light photodetection polymer optimized for exactly this range of wavelengths centered around 450 nm. We built and measured a simple photodetector made from spin-coated films of AG and showed that its photosensitivity can be improved by the addition of asphaltene, a low-cost carbonaceous waste product. Full article

Background/Objectives: Sacral chordomas are rare, locally invasive tumors that pose significant surgical and oncological challenges due to their anatomical complexity, proximity to critical structures, and resistance to conventional therapies. Methods: A literature search focused on contemporary multidisciplinary management of sacral chordoma was conducted. An illustrative case of such a multidisciplinary approach is presented. Results: Achieving optimal outcomes necessitates a multidisciplinary approach that balances en-bloc resection with negative margins and preservation of biomechanical stability and neurological function. Negative resection margins are a key determinant of long-term survival and reduced recurrence, particularly for tumors involving the upper sacrum (S1–S2). While postoperative radiation therapy provides adjunctive benefits, precision in surgical planning and execution remains paramount. Emerging technologies, such as augmented reality and 3D-printed anatomical models, are enhancing surgical precision, while the role of multidisciplinary surgical teams in improving outcomes requires further study. Conclusions: This review highlights the complexities of sacral chordoma management, focusing on surgical strategies, functional trade-offs, and future directions to optimize oncological and functional outcomes. Full article

The proliferation of the Internet of Things (IoT) has led to an abundance of data streams and real-time dashboards in domains such as smart cities, healthcare, manufacturing, and agriculture. However, many current IoT dashboards emphasize complex visualizations with minimal textual cues, posing significant barriers to users with visual impairments who rely on screen readers or other assistive technologies. This paper presents AccessiDashboard, a web-based IoT dashboard platform that prioritizes accessible design from the ground up. The system uses semantic HTML5 and WAI-ARIA compliance to ensure that screen readers can accurately interpret and navigate the interface. In addition to standard chart presentations, AccessiDashboard automatically generates long descriptions of graphs and visual elements, offering a text-first alternative interface for non-visual data exploration. The platform supports multi-modal data consumption (visual charts, bullet lists, tables, and narrative descriptions) and leverages Large Language Models (LLMs) to produce context-aware textual representations of sensor data. A privacy-by-design approach is adopted for the AI integration to address ethical and regulatory concerns. Early evaluation suggests that AccessiDashboard reduces cognitive and navigational load for users with vision disabilities, demonstrating its potential as a blueprint for future inclusive IoT monitoring solutions. Full article

(1) Background: Side-channel attacks (SCAs) exploit unintended information leakage to compromise cryptographic security. In cyber-physical systems (CPSs), embedded systems are inherently constrained by limited resources, restricting the implementation of complex countermeasures. Traditional countermeasures, such as hiding techniques, attempt to obscure power consumption patterns; however, their effectiveness has been increasingly challenged. This study evaluates the vulnerability of dummy power traces against deep learning-based SCAs (DL-SCAs). (2) Methods: A power trace dataset was generated using a simulation environment based on Quick Emulator (QEMU) and GNU Debugger (GDB), integrating dummy traces to obfuscate execution signatures. DL models, including a Recurrent Neural Network (RNN), a Bidirectional RNN (Bi-RNN), and a Multi-Layer Perceptron (MLP), were used to evaluate classification performance. (3) Results: The models trained with dummy traces achieved high classification accuracy, with the MLP model reaching 97.81% accuracy and an F1-score of 97.77%. Despite the added complexity, DL models effectively distinguished real and dummy traces, highlighting limitations in existing hiding techniques. (4) Conclusions: These findings highlight the need for adaptive countermeasures against DL-SCAs. Future research should explore dynamic obfuscation techniques, adversarial training, and comprehensive evaluations of broader cryptographic algorithms. This study underscores the urgency of evolving security paradigms to defend against artificial intelligence-powered attacks. Full article

Engineered laminated bamboo frame structures have seen notable advancements in China, driven by their potential in sustainable construction. However, accurately predicting their seismic performance remains a pivotal challenge. Structural and non-structural damage caused by earthquakes can severely compromise building operability, lead to substantial economic losses, and disrupt safe evacuation processes, collectively exacerbating disaster impacts. To address this, three laminated bamboo frame models (3-, 4-, and 5-story) were developed, integrating energy-dissipating T-shaped steel plate beam–column connections. Two engineering demand parameters—peak inter-story drift ratio (PIDR) and peak floor acceleration (PFA)—were selected to quantify seismic responses under near-field and far-field ground motions. The study systematically evaluates suitable intensity measures for these parameters, emphasizing efficiency and sufficiency criteria. Regarding efficiency, the applicable intensity measures for PFA differ from those for PIDR. The measures for PFA tend to focus more on acceleration amplitude-related measures such as peak ground accelerations (PGA), sustained maximum acceleration (SMA), effective design acceleration (EDA), and A₉₅ (the acceleration at 95% Arias intensity), while the measures for PIDR are primarily based on spectral acceleration-related measures such as S_a(T₁) (spectral acceleration at fundamental period), etc. Concerning sufficiency, significant differences exist in the applicable measures for PFA and PIDR, and they are greatly influenced by ground motion characteristics. Full article

The number of server failures, including those in radiotherapy, has dramatically increased over the past 5 years, primarily due to cyberattacks. Despite this trend, many clinics remain unprepared to handle such situations effectively. While it is possible to resolve these issues with thorough preparation and dedicated effort without causing significant interruptions to patient treatments, the process is considerably easier if numerous steps and analyses, both technical and clinical, have already been undertaken. This preemptive work allows for quicker responses and a faster resumption of patient treatments. There are established guidelines on how to prioritize patients and manage total dose in the event of multiple missed treatment sessions. However, many radiotherapy departments in Germany still lack individualized plans for handling software failures. In this article, we describe a failure of the radiotherapy OIS (ARIA by Varian) caused by an interface failure in the Central IT department of the clinic. From this event, we developed a clinical guideline for addressing issues during the outage and identified clinical processes that can be implemented in advance. Our focus was particularly on handling the large volumes of data involved in organizing patient treatments and scheduling. Overall, there needs to be a cultural shift in both the development of technical server infrastructures and the approach to managing OIS failures, as the likelihood of such events increases along with the negative impacts due to increasingly complex treatment plans and software landscapes. Full article

This study investigated the effects of three mulch types (straw, vermicompost and “plastic”) plus an untreated control, and three irrigation regimes (RFD: rainfed conditions; SIF: one supplemental irrigation at the flowering stage; SIVF: two supplemental irrigations at the vegetative and flowering stages) on the growth, seed yield, oil composition, and biochemical status of linseed (Linum usitatissimum L.). Linseed plants were best affected by SIVF and straw mulch in terms of seed yield (300 and 222.4 g m⁻², respectively), biomass yield (887.9 and 703 g m⁻², respectively), and concentration of oleic and linoleic acids. Under rainfed conditions, “plastic” mulch application increased stearic acid concentrations, while SIF increased palmitic acid concentrations. Rainfed conditions promoted the accumulation of proline (10.1 μmol g⁻¹ fresh weight), total phenols (6.68 mg g⁻¹ fresh weight), and DPPH radical scavenging capacity (56.5%). Under RFD, plants grown in straw-mulched soil showed the highest total phenol content and DPPH radical scavenging capacity, while control (unmulched) plants displayed the highest proline concentration at this irrigation regime. Enzyme activities, including catalase and superoxide dismutase, were enhanced under straw and “plastic” mulch compared to control plants under rainfed conditions. Our findings suggest that straw mulch represents an effective, sustainable strategy to successfully manage linseed crops, mitigating the adverse effects of water deficit stress on plant performance. Full article

Submarines are required to have good performance, which is influenced by their type of hull, hull conditions, and operational conditions. This study compares the resistance between a Modified-U209 (U209) submarine and the DARPA Suboff. The former is an older hull geometry with both surface and submerged operation considered, whereas the latter represents a modern nuclear-powered submarine designed for submerged operations only. The two geometries were scaled to give the same usable volume, and all results were non-dimensionalized using this to ensure consistency. A Computational Fluid Dynamics (CFD) method was utilized to predict resistance by employing the Reynolds-averaged Navier–Stokes (RANS) equations. The results show that the total resistance coefficient for the U209 bare hull is approximately 6% higher than the Suboff bare hull. When a casing was added to the U209 geometry the increase in total resistance coefficient was approximately 8%. The addition of the sail resulted in an increase in total resistance coefficient ranging from approximately 4% (Suboff sail added to U209) to approximately 14% (U209 sail added to U209). An existing empirical prediction technique was used to predict the resistance, with the total resistance coefficient predicted being consistently about 5% lower than the values obtained using CFD. Full article

Passion fruit is an underutilised fruit in Northeastern India, known for its unique flavour and health benefits. This study analysed 15 genotypes (P1 to P15) to explore their morphological and biochemical traits related to fruit quality and yield. P. quadrangularis L. (P15) exhibited maximum flower length, fruit size, weight, juice content, shelf-life, and yield. P. edulis f. flavicarpa (P3, P5, and P2) had the highest seed count per fruit and antioxidant activity, along with greater chlorophyll and anthocyanin levels. Passiflora edulis Sims (P8 and P11) showed superior total soluble solids, carotenoids, and vitamin C. The study found that fruit shelf life positively correlated with seed weight, while the number of fruits per vine negatively correlated with seed traits and peel weight. Additionally, certain traits, such as total carotenoids, had strong positive correlations with reducing sugar and flavonoids. Principal component analysis revealed distinct trait relationships, particularly for genotypes P7 and P10. SDS-PAGE protein profiling indicated a significant distance between P3 and P14, emphasising genetic diversity. In conclusion, this research highlights the diverse morphological and biochemical characteristics of passion fruit genotypes, paving the way for the region’s improved fruit quality, yield, and breeding strategies. Full article