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Authors = Jia-Wen Liu

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17 pages, 3771 KiB  
Article
Neural Correlates Underlying General and Food-Related Working Memory in Females with Overweight/Obesity
by Yazhi Pang, Yuanluo Jing, Jia Zhao, Xiaolin Liu, Wen Zhao, Yong Liu and Hong Chen
Nutrients 2025, 17(15), 2552; https://doi.org/10.3390/nu17152552 - 4 Aug 2025
Viewed by 135
Abstract
Background/Objectives: Prior research suggest that poor working memory significantly contributes to the growth of overweight and obesity. This study investigated the behavioral and neural aspects of general and food-specific working memory in females with overweight or obesity (OW/OB). Method: A total of 54 [...] Read more.
Background/Objectives: Prior research suggest that poor working memory significantly contributes to the growth of overweight and obesity. This study investigated the behavioral and neural aspects of general and food-specific working memory in females with overweight or obesity (OW/OB). Method: A total of 54 female participants, with 26 in the OW/OB group and 28 in the normal-weight (NW) group, completed a general and a food-related two-back task while an EEG was recorded. Results: In the general task, the OW/OB group showed significantly poorer performance (higher IES) than the NW group (p = 0.018, η2 = 0.10), with reduced theta power during non-target trials (p = 0.040, η2 = 0.08). No group differences were found for P2, N2, or P3 amplitudes. In the food-related task, significant group × stimulus interactions were observed. The OW/OB group showed significantly higher P2 amplitudes in high-calorie (HC) versus low-calorie (LC) food conditions (p = 0.005, η2 = 0.15). LPC amplitudes were greater in the OW/OB group for HC targets (p = 0.036, η2 = 0.09). Alpha power was significantly lower in OW/OB compared to NW in HC non-targets (p = 0.030, η2 = 0.09), suggesting a greater cognitive effort. Conclusions: These findings indicate that individuals with OW/OB exhibit deficits in general working memory and heightened neural responses to high-calorie food cues, particularly during non-target inhibition. The results suggest an interaction between reward salience and cognitive control mechanisms in obesity. Full article
(This article belongs to the Section Nutrition and Obesity)
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24 pages, 5075 KiB  
Article
Automated Machine Learning-Based Prediction of the Effects of Physicochemical Properties and External Experimental Conditions on Cadmium Adsorption by Biochar
by Shuoyang Wang, Xiangyu Song, Jicheng Duan, Shuo Li, Dangdang Gao, Jia Liu, Fanjing Meng, Wen Yang, Shixin Yu, Fangshu Wang, Jie Xu, Siyi Luo, Fangchao Zhao and Dong Chen
Water 2025, 17(15), 2266; https://doi.org/10.3390/w17152266 - 30 Jul 2025
Viewed by 246
Abstract
Biochar serves as an effective adsorbent for the heavy metal cadmium, with its performance significantly influenced by its physicochemical properties and various environmental features. Traditional machine learning models, though adept at managing complex multi-feature relationships, rely heavily on expertise in feature engineering and [...] Read more.
Biochar serves as an effective adsorbent for the heavy metal cadmium, with its performance significantly influenced by its physicochemical properties and various environmental features. Traditional machine learning models, though adept at managing complex multi-feature relationships, rely heavily on expertise in feature engineering and hyperparameter optimization. To address these issues, this study employs an automated machine learning (AutoML) approach, automating feature selection and model optimization, coupled with an intuitive online graphical user interface, enhancing accessibility and generalizability. Comparative analysis of four AutoML frameworks (TPOT, FLAML, AutoGluon, H2O AutoML) demonstrated that H2O AutoML achieved the highest prediction accuracy (R2 = 0.918). Key features influencing adsorption performance were identified as initial cadmium concentration (23%), stirring rate (14.7%), and the biochar H/C ratio (9.7%). Additionally, the maximum adsorption capacity of the biochar was determined to be 105 mg/g. Optimal production conditions for biochar were determined to be a pyrolysis temperature of 570–800 °C, a residence time of ≥2 h, and a heating rate of 3–10 °C/min to achieve an H/C ratio of <0.2. An online graphical user interface was developed to facilitate user interaction with the model. This study not only provides practical guidelines for optimizing biochar but also introduces a novel approach to modeling using AutoML. Full article
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13 pages, 2351 KiB  
Article
Transcriptomic Profiling Reveals Gene Expression Changes in Mouse Liver Tissue During Alveolar Echinococcosis
by Xiongying Zhang, Qing Zhang, Na Liu, Jia Liu, Huixia Cai, Cunzhe Zhao, Kemei Shi, Wen Lei, Wanli Ma, Shuai Guo, Wei Wang, Xiao Ma and Mei Wang
Genes 2025, 16(7), 839; https://doi.org/10.3390/genes16070839 - 18 Jul 2025
Viewed by 293
Abstract
Background/Objectives: Alveolar echinococcosis (AE), caused by Echinococcus multilocularis larvae, poses a significant global health concern. Primarily affecting regions in the northern hemisphere, such as northwest China, which are vital for animal husbandry, it often results in severe hepatic impairment in the host. However, [...] Read more.
Background/Objectives: Alveolar echinococcosis (AE), caused by Echinococcus multilocularis larvae, poses a significant global health concern. Primarily affecting regions in the northern hemisphere, such as northwest China, which are vital for animal husbandry, it often results in severe hepatic impairment in the host. However, there remains a dearth of knowledge concerning changes in gene expression profiles during the progression of AE. In this study, we employed transcriptome sequencing (RNA sequencing, RNA-Seq) to detect alterations in gene expression profiles in the liver tissues of mice with AE. Our aims were to understand the transcriptome differences in the liver during E. multilocularis infection and to explore the molecular mechanisms underlying the early progression of this disease. Methods: We established a mouse model of AE by intraperitoneally injecting protoscoleces of E. multilocularis. All the inoculated mice were randomly divided into four groups. Liver tissues were collected at 6, 12, 19, and 25 weeks after inoculation. Paired non-infected mouse-derived liver tissues were used as controls, and transcriptome sequencing was carried out. Results: A total of 629 differentially expressed genes (DEGs) were identified. Among them, 370 genes were upregulated and 259 genes were downregulated. Moreover, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses indicated that these DEGs were significantly associated with immune system modulation, the cell cycle, and the fibrosis process during the pathological changes. Additionally, weighted gene co-expression network analysis (WGCNA) identified several genes, including CCNA2, BIRC5, KIF2C, OTC, TLR2, and NCKAP1L. These hub genes involved in immunoinflammatory processes may be related to E. multilocularis larvae infection. Conclusions: The findings of this research provide a theoretical foundation for a more in-depth understanding of the molecular mechanisms of AE. They offer valuable insights into the molecular mechanisms and potential key factors involved in the pathogenesis of this disease. Full article
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21 pages, 4414 KiB  
Article
Rural Renewable Energy Resources Assessment and Electricity Development Scenario Simulation Based on the LEAP Model
by Hai Jiang, Haoshuai Jia, Yong Qiao, Wenzhi Liu, Yijun Miao, Wuhao Wen, Ruonan Li and Chang Wen
Energies 2025, 18(14), 3724; https://doi.org/10.3390/en18143724 - 14 Jul 2025
Viewed by 271
Abstract
This study combines convolutional neural network (CNN) recognition technology, Greenwich engineering software, and statistical yearbook methods to evaluate rural solar, wind, and biomass energy resources in pilot cities in China, respectively. The CNN method enables the rapid identification of the available roof area, [...] Read more.
This study combines convolutional neural network (CNN) recognition technology, Greenwich engineering software, and statistical yearbook methods to evaluate rural solar, wind, and biomass energy resources in pilot cities in China, respectively. The CNN method enables the rapid identification of the available roof area, and Greenwich software provides wind resource simulation with local terrain adaptability. The results show that the capacity of photovoltaic power generation reaches approximately 15.63 GW, the potential of wind power is 458.3 MW, and the equivalent of agricultural waste is 433,900 tons of standard coal. The city is rich in wind, solar, and biomass resources. By optimizing the hybrid power generation system through genetic algorithms, wind energy, solar energy, biomass energy, and coal power are combined to balance the annual electricity demand in rural areas. The energy trends under different demand growth rates were predicted through the LEAP model, revealing that in the clean coal scenario of carbon capture (WSBC-CCS), clean coal power and renewable energy will dominate by 2030. Carbon dioxide emissions will peak in 2024 and return to the 2020 level between 2028 and 2029. Under the scenario of pure renewable energy (H_WSB), SO2/NOx will be reduced by 23–25%, and carbon dioxide emissions will approach zero. This study evaluates the renewable energy potential, power system capacity optimization, and carbon emission characteristics of pilot cities at a macro scale. Future work should further analyze the impact mechanisms of data sensitivity on these assessment results. Full article
(This article belongs to the Special Issue Recent Advances in Renewable Energy and Hydrogen Technologies)
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15 pages, 3810 KiB  
Article
Identification of Immune Hub Genes in Obese Postmenopausal Women Using Microarray and Single-Cell RNA Seq Data
by Fu-Rong Zhang, Xuan Lu, Jia-Li Li, Yu-Xin Li, Wei-Wei Pang, Ning Wang, Kun Liu, Qian-Qian Zhang, Yun Deng, Qin Zeng, Xiao-Chao Qu, Xiang-Ding Chen, Hong-Wen Deng and Li-Jun Tan
Genes 2025, 16(7), 783; https://doi.org/10.3390/genes16070783 - 30 Jun 2025
Viewed by 446
Abstract
Background: Obesity is characterized by a chronic state of low-grade inflammation. Investigating immune-critical genes and their biological functions in the adipose tissue of postmenopausal obese women is crucial for elucidating the underlying mechanisms of immune dysregulation associated with obesity. Methods: In this study, [...] Read more.
Background: Obesity is characterized by a chronic state of low-grade inflammation. Investigating immune-critical genes and their biological functions in the adipose tissue of postmenopausal obese women is crucial for elucidating the underlying mechanisms of immune dysregulation associated with obesity. Methods: In this study, microarray (GSE151839) and single-cell RNA-seq (GSE176171) datasets were obtained from the Gene Expression Omnibus (GEO). For microarray data analysis, weighted gene co-expression network analysis (WGCNA), protein–protein interaction network (PPI) analysis, and immune infiltration analysis (ssGSEA) were employed to identify obesity-related immune-critical genes. Subsequently, the candidate genes were validated using scRNA-seq data to explore their expression patterns at the single-cell level. Finally, the expression levels of these immune-critical genes were experimentally verified in adipose tissue from obese and control zebrafish models using RT-qPCR. Results: Analysis of microarray data through WGCNA, PPI and ssGSEA identified 16 obesity-related immune-critical genes, including IL7R, CD3E, CD2, CCR5, CD3D, MS4A1, TRAT1, SLAMF8, CCL3L1, SPP1, CCL5, IL2RG, CD3G, TLR8, ITK, and CCL3. Differential expression of SPP1, ITK and CCL5 was confirmed in scRNA-seq data, with ITK and CCL5 showing distinct expression patterns in natural killer (NK) cells. Furthermore, RT-qPCR analysis revealed upregulation of SPP1 and ITK in adipose tissue of obese zebrafish compared to lean controls. Conclusions: This study identifies SPP1, ITK and CCL5 as key immune hub genes in the adipose tissue of postmenopausal obese women, with NK cells playing a significant role in adipose tissue inflammation through the expression of these genes. These findings provide novel insights into potential therapeutic targets for the prevention and treatment of obesity in postmenopausal women. Full article
(This article belongs to the Section RNA)
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18 pages, 2185 KiB  
Article
Supply and Demand Balance of Ecosystem Services in the Ulanbuh Desert
by Weijia Cao, Xinyu Wang, Qingkang Yang, Huan Liu, Guoxiu Jia, Huamin Liu, Lixin Wang, Xuefeng Zhang and Lu Wen
Land 2025, 14(7), 1371; https://doi.org/10.3390/land14071371 - 29 Jun 2025
Viewed by 446
Abstract
Desert ecosystems play a critical role in global climate regulation. Current research reveals a relative lack of research regarding desert ecosystem service (ES) supply and demand. Therefore, we selected the Ulanbuh desert, one of the eight major deserts in China, as study area. [...] Read more.
Desert ecosystems play a critical role in global climate regulation. Current research reveals a relative lack of research regarding desert ecosystem service (ES) supply and demand. Therefore, we selected the Ulanbuh desert, one of the eight major deserts in China, as study area. Using specialized models, we quantify the supply and demand of four ES, including water yield (Wy), soil conservation (Sc), windbreak and sand fixation (Ws), and carbon sequestration (Cs), from 1985 to 2020. Univariate linear regression analysis and panel data analysis (PDA) were used to examine trends in desert ES supply–demand ratio (ESDR) and its determinants. The findings indicated that ES supply presented increases in Sc and Cs, and decline in Ws from 1985 to 2020. Demand patterns showed a growth trend for Wy and Cs. ESDR revealed that Sc, Ws, and Cs show an excess of supply over demand and are in a decreasing trend, while Wy displays a supply deficit relative to demand with no significant change. The comprehensive ESDR decreased over the study period, with a supply-deficit status emerging in the southwestern area. Natural factors (NDVI and precipitation) and socio-economic factors (GDP and population density) served as the main factors affecting the comprehensive ESDR. This research provides a novel perspective for desert ecosystems management and conservation, emphasizing the necessity of incorporating the ES supply and demand balance into regional development policies to achieve sustainable development in arid regions. Full article
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14 pages, 671 KiB  
Article
Effects of Nitrogen and Phosphorus Additions on Soil N2O Emission and Soil Carbon Storage in Lakeshore Zone
by Sichen Qi, Guoxiu Jia, Weijia Cao, Wentao Zhong, Zhenxing Wang, Lixin Wang, Tiejun Liu, Jianying Guo and Lu Wen
Sustainability 2025, 17(13), 5987; https://doi.org/10.3390/su17135987 - 29 Jun 2025
Viewed by 455
Abstract
This study examined the short-term effects of nitrogen (N) and phosphorus (P) addition on soil N2O flux and organic carbon content in the lakeshore zone of an arid inland lake, Daihai. Treatments included control (N0P0), N addition (N1P0), P addition (N0P1), [...] Read more.
This study examined the short-term effects of nitrogen (N) and phosphorus (P) addition on soil N2O flux and organic carbon content in the lakeshore zone of an arid inland lake, Daihai. Treatments included control (N0P0), N addition (N1P0), P addition (N0P1), and NP co-addition (N1P1). Using the static chamber method and lab analyses, we measured soil N2O flux and organic carbon content at different growth stages. Results showed that, in the early growing season, short-term N and P addition had no significant effect on soil N2O flux, with all treatments acting as N2O sources. However, N and NP treatments significantly increased soil organic carbon (SOC) storage, improving carbon sequestration benefits by 72.7% to 98.1%. During the peak growing season, N and NP treatments significantly enhanced soil N2O emissions, while NP treatment further increased SOC storage, the carbon sequestration benefits of all treatments ranging from 49.0% to 56.5%. At the late growing season, N and P addition had no significant impact on soil N2O flux or organic carbon storage, with all sites acting as N2O sinks and SOC storage showing no significant change across treatments (carbon sequestration benefits ranged from 0.3% to 38.5%). The study highlights that the response of soil N2O flux to short-term N and P addition varies at different growth stages, while overall, N and P addition promotes soil carbon sequestration throughout the growing season in the lakeshore zone. Full article
(This article belongs to the Section Environmental Sustainability and Applications)
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12 pages, 7191 KiB  
Article
Molecular Identification and Survey of Tetratrichomonas buttreyi and Pentatrichomonas hominis in Cattle in Shanxi Province, North China
by Yu-Xuan Wang, Tao Jia, Zi-Rui Wang, Jin-Long Wang, Ze-Dong Zhang, Ze-Xuan Wu, Wen-Wei Gao, Xing-Quan Zhu and Qing Liu
Animals 2025, 15(13), 1899; https://doi.org/10.3390/ani15131899 - 27 Jun 2025
Viewed by 289
Abstract
Several trichomonad species have already been reported from cattle, including Tetratrichomonas buttreyi and Pentatrichomonas hominis. However, there is currently a lack of information concerning the prevalence of trichomonad species in cattle in Shanxi Province, North China. In this study, 761 fecal samples [...] Read more.
Several trichomonad species have already been reported from cattle, including Tetratrichomonas buttreyi and Pentatrichomonas hominis. However, there is currently a lack of information concerning the prevalence of trichomonad species in cattle in Shanxi Province, North China. In this study, 761 fecal samples from cattle across three counties in Shanxi Province, namely Qi, Jishan, and Shanyin, were examined for the presence of T. buttreyi and P. hominis DNA through a nested PCR assay targeting a specific segment of the small subunit ribosomal RNA (SSU rRNA) gene. The results showed that the total prevalence of T. buttreyi in cattle was found to be 74.5%, with region and sex identified as risk factors for infection. P. hominis exhibited an overall prevalence of 3.0%, with strong associations observed between infection and both region and age. Sequencing analysis indicated that some T. buttreyi isolates and all P. hominis isolates were identical to those reported previously based on the analysis of SSU rRNA sequences, while certain T. buttreyi isolates exhibited minor allelic variations. These results enhance our understanding of the geographical distribution and genetic characterization of T. buttreyi and P. hominis in cattle. Full article
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14 pages, 3406 KiB  
Article
Impacts of Fertilization Regimes on Yield and Grain Quality in Diverse Rice Genotypes Under Cold Temperate Conditions
by Guo-Hua Ding, Bao-Jia Han, Kai Liu, Jin-Song Zhou, Liang-Zi Cao, Lei Lei, Liang-Ming Bai, Guang Yang, Yu Luo, Man-Li Wang, Wen-Xiu Hou, Yan-Song Ma, Yang Ren, Yan-Jiang Feng and Shi-Chen Sun
Agriculture 2025, 15(12), 1303; https://doi.org/10.3390/agriculture15121303 - 17 Jun 2025
Viewed by 480
Abstract
The purpose of this research is to clarify the genetic groups associated with high-quality germplasms with different genotypes and investigate the responses of their yield and quality traits to varied fertilization regimes, thereby providing references for premium breeding and cultivation practices. A total [...] Read more.
The purpose of this research is to clarify the genetic groups associated with high-quality germplasms with different genotypes and investigate the responses of their yield and quality traits to varied fertilization regimes, thereby providing references for premium breeding and cultivation practices. A total of 29 samples, including 15 newly developed lines and 14 elite cultivars, were analyzed as to their genetic structure. A split-plot field experiment was conducted to evaluate the responses of yield, quality, and agronomic traits to different fertilization treatments. The 29 samples were classified into three genetic groups. Line 1, developed by our team, formed a unique group, while Lines 3 and 8 constituted another distinct group. In the 2022 trial, the protein content ranged from 6.8% to 9.0%, amylose content from 17.9% to 20.1%, and taste value from 73.8 to 85.7. The top five samples in yield were Line 4, Line 2, Line 5, Line 6, and Line 1, with significant differences among them (p < 0.05) and markedly higher yields compared to other samples. For taste value, Longdao 17029, Line 2, Line 4, Line 5, and Line 6 ranked highest, with Longdao 17029 exhibiting significantly superior taste scores (p < 0.05). Fertilizer treatments ranked by yield were as follows: Treatment 1 (N120P100K100) > Treatment 4 (Longfutianxia slow-release fertilizer) > Treatment 2 (N96P100K100 + bio-organic fertilizer) > Treatment 3 (N0P0K0), with significant differences (p < 0.05). Treatment 2 achieved a significantly higher taste value than the others (p < 0.05). In the 2023 trial, Longdao 17029 demonstrated higher leaf color index and net photosynthetic rate during the grain-filling stage, compared to Longdao 18 and Longdao 21. Lines 1, 3, and 8 are valuable for broadening the genetic diversity of rice in cold regions. Line 4 and Longdao 17029 show potential as novel germplasms for improving yield and taste quality. Moderate nitrogen reduction, combined with bio-organic fertilizer application, enhances rice taste value. Full article
(This article belongs to the Section Crop Production)
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21 pages, 4600 KiB  
Article
Trends and Emerging Hotspots in Toxicology of Chironomids: A Comprehensive Bibliometric Analysis
by Wen-Bin Liu, Wen-Xuan Pei, Zi-Ming Shao, Jia-Xin Nie, Wei Cao and Chun-Cai Yan
Insects 2025, 16(6), 639; https://doi.org/10.3390/insects16060639 - 17 Jun 2025
Viewed by 702
Abstract
(1) Background: Aquatic organisms are more sensitive to pollutants than terrestrial ones, making them ideal for ecotoxicology studies. Chironomids, a key bioindicator species, have been widely used in environmental pollution research. With the continuous deepening of research on water environmental pollution and the [...] Read more.
(1) Background: Aquatic organisms are more sensitive to pollutants than terrestrial ones, making them ideal for ecotoxicology studies. Chironomids, a key bioindicator species, have been widely used in environmental pollution research. With the continuous deepening of research on water environmental pollution and the continuous development of molecular biology, it is therefore very important to understand the current research progress of the toxicology of chironomids. (2) Methods: This study used bibliometrics to analyze 1465 publications on chironomid toxicology from the Web of Science and PubMed databases, aiming to reveal research trends, hotspots, and future directions. The data analysis involved Microsoft Excel, VOS viewer, CiteSpace, and ChatGLM. (3) Results: Heavy metals, pesticides, and microplastics were the main pollutants studied, with Chironomus riparius being the most researched species. The analysis indicated a growing research trend since 1998, reflecting an increasing global concern over aquatic pollution. This study concludes that more molecular-level research is needed to uncover toxic mechanisms and improve environmental risk assessments. (4) Conclusions: This work will aid scientists and policymakers in developing better pollution control strategies and conservation efforts for aquatic ecosystems, ultimately contributing to environmental protection and public health. Full article
(This article belongs to the Section Other Arthropods and General Topics)
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20 pages, 4387 KiB  
Article
Modification of Biochar Catalyst Using Copper for Enhanced Catalytic Oxidation of VOCs
by Nan Liu, Jin Zhang, Ya-Lan Cai, Ji-Guo Zhang, Du-Juan Ouyang, Shao-Bo Wang, Qi-Man Xu, Jia-Jun Hu, Di-Ming Chen, Guo-Wen Wang and Ji-Xiang Li
Toxics 2025, 13(6), 503; https://doi.org/10.3390/toxics13060503 - 14 Jun 2025
Cited by 1 | Viewed by 628
Abstract
Recently, research has increasingly focused on the introduction of non-precious metals and developing highly stable carriers to enhance catalyst performance. In this study, we successfully synthesized copper (Cu)-modified biochar catalysts utilizing a sequential approach involving enzymatic treatment, liquid impregnation, and activation processes, which [...] Read more.
Recently, research has increasingly focused on the introduction of non-precious metals and developing highly stable carriers to enhance catalyst performance. In this study, we successfully synthesized copper (Cu)-modified biochar catalysts utilizing a sequential approach involving enzymatic treatment, liquid impregnation, and activation processes, which effectively enhanced the dispersion and introduction efficiency of Cu onto the biochar, thereby reducing the requisite Cu loading while maintaining high catalytic activity. The experimental results showed that the toluene degradation of 10%Cu@BCL was three times higher than that of unmodified activated carbon (AC) at 290 °C. A more uniform distribution of Cu was obtained by the enzymatic and activation treatments, optimizing the catalyst’s structural properties and reducing the amount of Cu on the biochar. Moreover, the transformation between various oxidation states of Cu (from Cu0/Cu(I) to Cu(II)) facilitated the electron transfer during the degradation of toluene. To further understand the catalytic mechanisms, density functional theory (DFT) calculations were employed to elucidate the interactions between toluene molecules and the Cu-modified biochar surface. These findings reveal that the strategic modification of biochar as a carrier not only enhances the dispersion and stability of active metal species but contributes to improved catalytic performance, thereby enhancing its degradation efficiency for VOCs in high-temperature conditions. Full article
(This article belongs to the Section Toxicity Reduction and Environmental Remediation)
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15 pages, 8206 KiB  
Article
Preliminary Proteomic and Metabolomic Analyses Reveal Potential Serum Biomarkers for Identifying Alveolar Echinococcosis in Mice
by Qing Zhang, Xiongying Zhang, Na Liu, Jia Liu, Wei Wang, Yongshun Wang, Wen Lei, Cunzhe Zhao, Wanli Ma, Shuai Guo, Huixia Cai, Jingxiao Zhang, Yufang Liu, Kemei Shi, Wen Zhang and Xiao Ma
Vet. Sci. 2025, 12(6), 565; https://doi.org/10.3390/vetsci12060565 - 9 Jun 2025
Viewed by 600
Abstract
Alveolar echinococcosis (AE) is a chronic and potentially fatal zoonotic parasitic disease that seriously affects the host’s health. It is caused by the proliferation of Echinococcus multilocularis larvae within the liver. Due to its long incubation period following host infection, early diagnosis of [...] Read more.
Alveolar echinococcosis (AE) is a chronic and potentially fatal zoonotic parasitic disease that seriously affects the host’s health. It is caused by the proliferation of Echinococcus multilocularis larvae within the liver. Due to its long incubation period following host infection, early diagnosis of the disease is currently not feasible. Treatment options are extremely limited, with the only choice being curative surgical resection combined with benzimidazole medication. Thus, the development of early, rapid, and minimally invasive diagnostic methods is crucial for enhancing patient prognosis. This study conducted proteomic and metabolomic analyses of protein and metabolite changes in the serum of a treatment group and control group, aiming to compare the differences between them. Overall, 22 proteins showed significant differences between the treatment and control groups, primarily involved in carbohydrate metabolism, lipid metabolism, and amino acid metabolism. The upregulation of genes related to immune response and enhanced glycolysis were observed, possibly associated with the reproduction of E. multilocularis in the liver. A total of 182 metabolites were screened to distinguish between the treatment group and control group. A significant increase in the cytochrome P450 (cP450) metabolite of arachidonic acid indicated signs of renal and splenic involvement in the treatment group. Furthermore, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis highlighted a strong association between amino acid metabolism and the development of AE. The observed changes in amino acid levels may provide nutrients that facilitate E. multilocularis colonization and contribute to the pathogenesis of AE. In summary, by investigating the different characteristics of the AE and control group through proteomic (n = 4/group/time point) and metabolomic (n = 8/group/time point) analyses, potential serum biomarkers for diagnosing mice with AE were identified. Full article
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24 pages, 2492 KiB  
Review
Antioxidant Peptides Derived from Woody Oil Resources: Mechanisms of Redox Protection and Emerging Therapeutic Opportunities
by Jia Tu, Jie Peng, Li Wen, Changzhu Li, Zhihong Xiao, Ying Wu, Zhou Xu, Yuxi Hu, Yan Zhong, Yongjun Miao, Jingjing Xiao and Sisi Liu
Pharmaceuticals 2025, 18(6), 842; https://doi.org/10.3390/ph18060842 - 4 Jun 2025
Viewed by 708
Abstract
Antioxidant peptides derived from woody oil resource by-products exhibit strong free radical scavenging abilities and offer potential applications in functional foods, nutraceuticals, and cosmetics. This review summarizes the latest advances in preparation technologies, including enzymatic hydrolysis, microbial fermentation, chemical synthesis, recombinant expression, and [...] Read more.
Antioxidant peptides derived from woody oil resource by-products exhibit strong free radical scavenging abilities and offer potential applications in functional foods, nutraceuticals, and cosmetics. This review summarizes the latest advances in preparation technologies, including enzymatic hydrolysis, microbial fermentation, chemical synthesis, recombinant expression, and molecular imprinting, each with distinct advantages in yield, selectivity, and scalability. The structure–activity relationships of antioxidant peptides are explored with respect to amino acid composition, molecular weight, and 3D conformation, which collectively determine their bioactivity and stability. Additionally, emerging delivery systems—such as nanoliposomes, microencapsulation, and cell-penetrating peptides—are discussed for their role in enhancing peptide stability, absorption, and targeted release. Mechanistic studies reveal that antioxidant peptides from woody oil resources act through network pharmacology, engaging core signaling pathways, including Nrf2/ARE, PI3K/Akt, AMPK, and JAK/STAT, to regulate oxidative stress, mitochondrial health, and inflammation. Preliminary safety data from in vitro, animal, and early clinical studies suggest low toxicity and favorable tolerability. The integration of omics technologies, molecular docking, and bioinformatics is accelerating the mechanism-driven design and functional validation of peptides. In conclusion, antioxidant peptides derived from woody oil resources represent a sustainable, multifunctional, and scalable solution for improving human health and promoting a circular bioeconomy. Future research should focus on structural optimization, delivery enhancement, and clinical validation to facilitate their industrial translation. Full article
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16 pages, 4257 KiB  
Article
Discovery of Small-Molecule Inhibitors Against Norovirus 3CLpro Using Structure-Based Virtual Screening and FlipGFP Assay
by Hao Shen, Shiqi Liu, Limin Shang, Yuchen Liu, Yijin Sha, Dingwei Lei, Yuehui Zhang, Chaozhi Jin, Shanshan Wu, Mingyang Zhang, Han Wen, Chenxi Jia and Jian Wang
Viruses 2025, 17(6), 814; https://doi.org/10.3390/v17060814 - 4 Jun 2025
Viewed by 679
Abstract
Norovirus, a major cause of acute gastroenteritis, possesses a single-stranded positive-sense RNA genome. The viral 3C-like cysteine protease (3CLpro) plays a critical role in processing the viral polyprotein into mature non-structural proteins, a step essential for viral replication. Targeting 3CLpro [...] Read more.
Norovirus, a major cause of acute gastroenteritis, possesses a single-stranded positive-sense RNA genome. The viral 3C-like cysteine protease (3CLpro) plays a critical role in processing the viral polyprotein into mature non-structural proteins, a step essential for viral replication. Targeting 3CLpro has emerged as a promising strategy for developing small-molecule inhibitors against Norovirus. In this study, we employed a combination of virtual screening and the FlipGFP assay to identify potential inhibitors targeting the 3CLpro of Norovirus genotype GII.4. A library of approximately 58,800 compounds was screened using AutoDock Vina tool, yielding 20 candidate compounds based on their Max Affinity scores. These compounds were subsequently evaluated using a cell-based FlipGFP assay. Among them, eight compounds demonstrated significant inhibitory activity against 3CLpro, with Gedatolisib showing the most potent effect (IC50 = 0.06 ± 0.01 μM). Molecular docking and molecular dynamics simulations were conducted to explore the binding mechanisms and structural stability of the inhibitor–3CLpro complexes. Our findings provide valuable insights into the development of antiviral drugs targeting Norovirus 3CLpro, offering potential therapeutic strategies to combat Norovirus infections. Full article
(This article belongs to the Section Viral Immunology, Vaccines, and Antivirals)
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16 pages, 8200 KiB  
Article
Enhancing Soil Phosphorus and Potassium Availability in Tea Plantation: The Role of Biochar, PGPR, and Phosphorus- and Potassium-Bearing Minerals
by Wen Wei, Kunyu Li, Changjun Li, Siyu Wang, Lulu Li, Jinchuan Xie, Ting Li, Zijun Zhou, Shirong Zhang, Yulin Pu, Yongxia Jia, Xiaojing Liu, Xiaoxun Xu and Guiyin Wang
Agronomy 2025, 15(6), 1287; https://doi.org/10.3390/agronomy15061287 - 23 May 2025
Cited by 1 | Viewed by 662
Abstract
The co-application of biochar, plant growth-promoting rhizobacteria (PGPR), and phosphorus- and potassium-bearing minerals has emerged as a promising strategy for improving soil nutrient availability. However, the synergistic effects and impact factors that facilitate this optimization are yet to be fully elucidated. To address [...] Read more.
The co-application of biochar, plant growth-promoting rhizobacteria (PGPR), and phosphorus- and potassium-bearing minerals has emerged as a promising strategy for improving soil nutrient availability. However, the synergistic effects and impact factors that facilitate this optimization are yet to be fully elucidated. To address this knowledge gap, we conducted a pot experiment to evaluate the effects of these amendments on tea yield and phosphorus (P)/potassium (K) availability, while employing Random Forest (RF) and Partial Least Squares Structural Equation Modeling (PLS-SEM) to reveal the underlying mechanisms driving these improvements. The results demonstrated that the tripartite combination significantly enhanced tea yield, leaf P/K concentrations, and soil available P (AP)/available K (AK) levels compared to individual applications or pairwise combinations. Analytical modeling identified Chloroflexi bacteria containing pqqc functional genes as key drivers of AP enhancement. The AP was further modulated by β-glucosidase activity, NaHCO3-P, and AK levels. Critical determinants of AK dynamics included phosphorus-solubilizing bacterial populations, catalase activity, and fundamental soil chemical properties. In summary, our research conclusively shows that the co-application of phosphorus- and potassium-bearing minerals, PGPR, and biochar represents an effective approach to enhancing P and K accessibility in soil, thereby offering a viable alternative to conventional P and K fertilizers in tea cultivation. Full article
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