Computer Vision Techniques for Plant Phenomics Applications

A special issue of Plants (ISSN 2223-7747). This special issue belongs to the section "Plant Modeling".

Deadline for manuscript submissions: 31 March 2026 | Viewed by 835

Special Issue Editors


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Guest Editor
College of Information Science and Technology & Artifical Intellengce, Nanjing Forestry University, Nanjing 210037, China
Interests: computer vision; deep learning; forestry remote sensing
Special Issues, Collections and Topics in MDPI journals

E-Mail Website
Guest Editor
Information Technology Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
Interests: digital plant; plant phenotyping; 3D modelling; 3D reconstruction; visual computing
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

Plant phenomics, the study of plant traits and their responses to environmental conditions, is critical for advancing agricultural productivity, sustainability, and food security. With the rapid development of computer vision technologies, there is a transformative opportunity to enhance the precision, scalability, and efficiency of phenotyping processes. Computer vision techniques, such as image segmentation, feature extraction, and deep learning, have shown great promise in analyzing plant traits from high-throughput imaging data, enabling non-invasive and real-time monitoring of plant growth, stress responses, and yield potential.

However, adapting computer vision to plant phenomics presents unique challenges, including handling diverse plant morphologies, varying environmental conditions, and integrating multi-modal data (e.g., RGB, hyperspectral, and 3D imaging). This Special Issue aims to bring together cutting-edge research that addresses these challenges, fostering interdisciplinary collaboration between the computer vision and plant science communities. We invite contributions covering a wide range of topics, including, but not limited to, the following:

  • Advanced Image Processing Techniques: Novel algorithms for plant segmentation, trait extraction, and morphological analysis.
  • Deep Learning for Phenotyping: Applications of convolutional neural networks (CNNs), transformers, and other deep learning models in plant trait identification and classification.
  • Multi-Modal Data Integration: Combining RGB, hyperspectral, thermal, or 3D imaging for comprehensive phenotyping.
  • High-Throughput Phenotyping Systems: Automated platforms for large-scale plant imaging and analysis.
  • Robustness to Environmental Variability: Methods to handle varying lighting, backgrounds, and field conditions in outdoor phenotyping.
  • Real-Time Monitoring and Analysis: Computer vision solutions for dynamic, in situ plant monitoring.
  • Applications in Precision Agriculture: Use cases in crop breeding, stress detection, yield prediction, and resource optimization.
  • Open-Source Tools and Datasets: Development of publicly available software and benchmark datasets for plant phenomics research.

Dr. Xijian Fan
Dr. Weiliang Wen
Guest Editors

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Keywords

  • computer vision
  • deep learning
  • UAV remote sensing
  • multisource fusion
  • plant phenomics
  • phenotypic traits extraction

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Published Papers (1 paper)

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Research

17 pages, 3498 KB  
Article
Self-Supervised Learning and Multi-Sensor Fusion for Alpine Wetland Vegetation Mapping: Bayinbuluke, China
by Muhammad Murtaza Zaka, Alim Samat, Jilili Abuduwaili, Enzhao Zhu, Arslan Akhtar and Wenbo Li
Plants 2025, 14(20), 3153; https://doi.org/10.3390/plants14203153 - 13 Oct 2025
Viewed by 641
Abstract
Accurate mapping of wetland vegetation is essential for ecological monitoring and conservation, yet it remains challenging due to the spatial heterogeneity of wetlands, the scarcity of ground-truth data, and the spread of invasive species. Invasive plants alter native vegetation patterns, making their early [...] Read more.
Accurate mapping of wetland vegetation is essential for ecological monitoring and conservation, yet it remains challenging due to the spatial heterogeneity of wetlands, the scarcity of ground-truth data, and the spread of invasive species. Invasive plants alter native vegetation patterns, making their early detection critical for preserving ecosystem integrity. This study proposes a novel framework that integrates self-supervised learning (SSL), supervised segmentation, and multi-sensor data fusion to enhance vegetation classification in the Bayinbuluke Alpine Wetland, China. High-resolution satellite imagery from PlanetScope-3 and Jilin-1 was fused, and SSL methods—including BYOL, DINO, and MoCo v3—were employed to learn transferable feature representations without extensive labeled data. The results show that SSL methods exhibit consistent variations in classification performance, while multi-sensor fusion significantly improves the detection of rare and fragmented vegetation patches and enables the early identification of invasive species. Overall, the proposed SSL–fusion strategy reduces reliance on labor-intensive field data collection and provides a scalable, high-precision solution for wetland monitoring and invasive species management. Full article
(This article belongs to the Special Issue Computer Vision Techniques for Plant Phenomics Applications)
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