Computation-Driven Discovery of Modern Small-Molecule Therapeutics: From Enzyme Inhibition to Targeted Protein Degradation
A special issue of Pharmaceuticals (ISSN 1424-8247). This special issue belongs to the section "AI in Drug Development".
Deadline for manuscript submissions: 20 September 2026 | Viewed by 270
Special Issue Editor
Interests: medicinal chemistry; drug design; molecular dynamics simulation; molecular docking; organic synthesis
Special Issue Information
Dear Colleagues,
With the rapid evolution of structural biology, artificial intelligence, and molecular simulation technologies, computational strategies have become indispensable across the modern drug discovery pipeline—from target identification and mechanistic studies (e.g., enzyme inhibition) to the rational design of emerging therapeutic modalities such as targeted protein degradation (e.g., PROTACs and molecular glues).
This Special Issue aims to highlight the transformative impact of computational approaches in accelerating the discovery and development of small-molecule therapeutics. We welcome contributions featuring advanced computational methodologies, including but not limited to molecular docking, free-energy calculations, machine learning-driven virtual screening, multi-scale modeling, molecular dynamic simulation, quantum chemical calculations, and AI-based drug design. Studies that integrate computational predictions with experimental validation are particularly encouraged.
The goal of this Special Issue is to provide a platform for disseminating cutting-edge research that bridges computation, chemistry, and biology, thereby fostering the development of next-generation therapeutic molecules.
Dr. Yudibeth Sixto-López
Guest Editor
Manuscript Submission Information
Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 250 words) can be sent to the Editorial Office for assessment.
Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Pharmaceuticals is an international peer-reviewed open access monthly journal published by MDPI.
Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2900 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.
Keywords
- computer-aided drug design
- small-molecule drugs
- enzyme inhibition
- PROTACs
- molecular docking
- molecular dynamics simulation
- artificial intelligence in drug design
- virtual screening
Benefits of Publishing in a Special Issue
- Ease of navigation: Grouping papers by topic helps scholars navigate broad scope journals more efficiently.
- Greater discoverability: Special Issues support the reach and impact of scientific research. Articles in Special Issues are more discoverable and cited more frequently.
- Expansion of research network: Special Issues facilitate connections among authors, fostering scientific collaborations.
- External promotion: Articles in Special Issues are often promoted through the journal's social media, increasing their visibility.
- Reprint: MDPI Books provides the opportunity to republish successful Special Issues in book format, both online and in print.
Further information on MDPI's Special Issue policies can be found here.