1. Introduction
Glycosylation is a process involving complex co- and post-translation protein modifications via the addition of glycans. The three basic types of N-glycans (oligomannose, hybrid, and complex) all share a common pentasaccharide core and are processed sequentially [
1]. The various types of N-glycans occur due to the addition of different branch points via the action of N-acetylglucosaminyltransferases (GnTs). These enzymes are encoded by the
MGAT genes and are critical to the proper development of organisms at the cellular level. The conversion of oligomannosylated proteins into hybrid type is catalyzed via GnT-I, an enzyme encoded by the
MGAT1 gene. GnT-II, encoded by
MGAT2, acts to further process hybrid- to complex-type N-glycans [
1]. Since most proteins following the secretory pathway undergo N-glycosylation processing and this process can modify the structure and function of a protein, N-glycan processing is vital to the development and maintenance of a multicellular organism.
The magnitude of disruptions in N-glycosylation is highlighted in congenital disorders of glycosylation (CDG). Although CDG’s are a rare group of disorders, the number of identified CDGs are rising, and patients face a bleak prognosis as therapeutic options are quite limited, with dietary supplementation as the predominant management technique [
2]. The impact of CDGs is multisystemic, with profound neurological complications [
3,
4]. Neurological symptoms associated with CDG include psychomotor retardation, cognitive disorders, ataxia, epileptic seizures, polyneuropathy, hypotonia, and stroke-like events [
5,
6]. Further, patients often experience depression and anxiety [
7]. Like CDG’s, many other diseases have been associated with defective glycosylation, including cancer, neurodegenerative diseases, neurological disorders, and autoimmune diseases [
5,
8]. As such, additional research is necessary to further advance the field on the relationship between glycans and disease onset, progression, and treatment.
The diverse glycobiome of zebrafish (Danio rerio) has allowed for the creation of a platform to generate glycosylation mutant models to examine the effects of knockdown of specific genes involved in glycosylation. A knockout (fsck
−/−) zebrafish model with mutations in the FCSK gene, which encodes fucokinase, an enzyme involved in fucosylation, exhibited neurodevelopmental defects along with locomotor deficiencies [
9]. Further, zebrafish with phosphomannose isomerase (MPI) deficiency, an enzyme involved in the N-glycosylation of secretory proteins, showed multi-systemic deformities and increased embryonic lethality [
10]. Notably, rescue was attained in the above-mentioned models with the supplementation of GDP-L-fucose or mannose, respectively [
9,
10].
Since all three of the basic N-glycan types are represented in zebrafish as early as 6 h post-fertilization (hpf), and are rich in oligomannose-type N-glycans [
11], our prior studies included the generation of a GnT-I knockdown strain, specifically GnT-Ib, which resulted in diminished survivability, developmental delays, and aberrant spinal cord primary motor neuron structure relative to Wt AB zebrafish [
12,
13]. Since zebrafish have two GnT-I enzymes (GnT-Ia/b), unlike mice and humans, the study proved advantageous since the inactivation of
Mgat1 in neuronal tissue of mice yielded severe neurological defects and early post-natal death at approximately embryonic day (E13) [
14], while global knockout of
Mgat1 in mice diminished survivability beyond (E10.5) due to maldevelopment of the neural tube [
15]. Hence, knockdown of one of the GnT-I enzymes independent from the other in zebrafish was not lethal and prompted studies lasting into adulthood, which also set the stage for the next chapter of the project, the knockdown of GnT-Ia.
In this study, we created a
mgat1a mutant fish model (
mgat1a−/−) to compare alongside our previously generated
mgat1b−/− model and the Wt AB strain. We showed that
mgat1a−/−, like
mgat1b−/−, has higher levels of oligomannose and less complex N-glycans compared to Wt AB zebrafish in all tissues tested, thus supporting a global effect. Additionally, we showed that
mgat1a−/− has more oligomannose-type N-glycans than
mgat1b−/− in all tested tissues, except brain of the zebrafish lines, and furthermore, different oligomannosylated protein expression patterns could be observed between
mgat1a−/− and
mgat1b−/−. Tail-coiling assays in embryos (24 hpf) showed motor function was most hampered in
mgat1b−/− relative to Wt AB while
mgat1a−/− was intermediate. Touch-evoked response assays established impaired motor and sensory functions in
mgat1a−/− embryos (48 hpf) and larvae relative to Wt AB, which was previously reported in
mgat1b−/− [
12]. Likewise, dysfunctional locomotor activity propagated to adulthood, as the impaired swimming distance of adult fish was most pronounced in
mgat1b−/− relative to Wt AB with
mgat1a−/− intermediate. Anxiety-like behavior was modified in the
mgat1 mutant fish relative to Wt AB, but the mutant lines yielded opposite effects. Taken together, results of this study implicate that a reduction in complex-type N-glycans impedes the interaction between the nervous system and muscle to facilitate movement, as well as anxiety-like behavior.
2. Materials and Methods
2.1. Animal Husbandry, Larva and Embryo Collections
All zebrafish procedures received approval from the Institutional Animal Care & Use Committee (IACUC) at East Carolina University (AUP # C065b and approval date 29 January 2025). The adult wild-type (Wt) Pseudoloma-free AB strain, characterized by its robust health and suitability for research, was procured from the Sinnhuber Aquatic Research Laboratory, and subsequently propagated at ECU. This strain was utilized to develop mutant zebrafish through precise genetic editing of the mgat1a gene. Zebrafish were carefully maintained in a dedicated Pseudoloma-free, temperature-controlled environment (28 °C), adhering to a natural light/dark cycle of 14 h on and 10 h off. Embryos harvested from spontaneous spawning events were initially placed in 100 × 15 mm Petri dishes filled with egg water (5.03 mM NaCl, 0.17 mM KCl, 0.33 mM CaCl2•2H2O, 0.33 mM MgSO4•7H2O, and 0.05% methylene blue per liter of system water), and housed in the fish lab with water changes and feeding commenced twice daily, beginning at 5 days post-fertilization (dpf) to ensure optimal growth. At 5 dpf, larvae were transitioned to larger tanks with minimal egg water, and water exchanges commenced with a gradual change in the composition of the egg water relative to system water to allow for adequate acclimation (75:25 at 5 dpf; 50:50 at 6 dpf; 25:75 at 7 dpf; 0:100 at 8 dpf and beyond). All experiments utilizing live zebrafish were performed at 28 °C and used F2 and F3 generations of the mutant fish lines.
2.2. CRISPR/Cas9 Targets and Production of Purified sgRNA
The procedure used to engineer the
mgat1a−/− mutant fish was like that previously described to create the
mgat1b−/− [
12]. In brief, the CHOPCHOP program was used to assign a guide RNA (gRNA) target sequence (CCC
TGATCAGCGCAAAGACA) in zebrafish
Mgat1a (Accession Number: NM_200676). The BclI site is underlined in the target sequence, which allowed for the identification of edited genomic DNA. The target sequence was designed with a T7 promoter sequence added to the 5′ end of the target sequence, as well as a 14 nucleotide overlap sequence to the 3′ end, for use with the EnGen
® sgRNA Synthesis Kit, S. pyogenes (New England Biolabs, Ipswich, MA, USA), followed by purification of the transcribed nucleotide via the Monarch
® Kit for RNA Cleanup (New England Biolabs).
2.3. Genotyping of Embryos, Larvae, and Adult Fish
Samples were collected (embryos, larvae, or a small portion of the adult fish tail) and genomic DNA extracted via incubation in 50 mM NaOH at 99 °C for 15–20 min. The supernatant containing DNA from the dissolved samples was used directly for PCR. PCR forward (agtacttcagagcgcttcatcc) and reverse (ggggcagttctacgacaagtac) primers were used to amplify the gRNA target region. PCR conditions were as previously reported [
12]. Genetic modification of the fragment was ascertained by restriction enzyme (RE) digest, followed by band(s) separation on an agarose gel. An undigested band demonstrated that the DNA was edited for at least one of the
Mgat1a alleles.
2.4. Engineering the mgat1a−/− Mutant Line
The
mgat1a−/− mutant line was generated in a similar manner as the
mgat1b−/− strain [
12]. Single-cell embryos were microinjected with a 500-picoliter solution comprising 100 ng/µL of sgRNA and 360 pg/µL of EnGen Spy Cas9 NLS
®. The microinjections were facilitated by compressed nitrogen gas and managed using a PV820 Pneumatic PicoPump (World Precision Instruments, Sarasota, FL, USA). A microcapillary pipette, connected to a micromanipulator, was employed under a Nikon microscope (Tokyo, Japan) for this process. To assess gRNA efficiency, at 24 hpf. about thirty microinjected embryos (F0) were collected, pooled, and genotyped. If the pooled F0 embryos displayed undigested bands after treatment with the restriction enzyme BclI (Thermofisher, Waltham, MA, USA), this indicated that Cas9 had successfully cleaved the targeted region, with the cell having incorrectly repaired the damage, thereby disrupting the BclI site and potentially resulting in a frameshift mutation. All remaining microinjected F0 embryos were raised to adulthood and later evaluated for gene editing through fin-clipping and restriction enzyme (RE) digestion. Moreover, adult F0 fish were outcrossed with Wt AB. F1 embryos were screened for gene editing via RE digestion, and then mutations were identified by DNA sequencing of the amplified DNA fragment. Male and female fish with identical mutations (△13) were crossed to generate F2 embryos and adult fish and screened by RE digestion.
2.5. Whole Brain and Brain Region Dissections
Prior to dissection of tissues, adult fish were humanely euthanized via anesthetization with MS222 followed by an ice slurry bath for 10 min until operculum movement ceased, in strict accordance with IACUC protocols, ensuring ethical treatment throughout the research process. For brain dissection, a similar protocol was followed to that outlined at
https://app.jove.com/v/20201/zebrafish-brain-dissection-a-technique-of-fish-neurobiology (accessed on 12 February 2025). In summary, a euthanized fish was placed on a dissection bed and a surgical blade was used for decapitation at the level of the gill. Then, with the ventral side facing up, the soft tissues were removed using forceps. The optic nerves were severed with spring scissors, and the eyes were subsequently removed. Next, the fish was oriented with the dorsal side facing up, and portions of the skull were removed to isolate the brain, which was extracted using forceps. For brain sections, the whole brain was cut in the middle of the optic tectum. Region 1 of the brain includes the olfactory bulb, telencephalon, habenula, and the first half of the optic tectum. Region 2 is the second half of the optic tectum, cerebellum, and medulla. Whole brains and brain regions were placed in microcentrifuge tubes and stored at −80 °C until needed.
2.6. Dissections of Tissue
Zebrafish tissues were dissected as previously reported [
13] and euthanization was carried out as outlined above. The spinal cord, heart, swim bladder, and skeletal muscle were collected. Dissected tissues were placed in cryotubes, flash-frozen in liquid nitrogen, and stored at −80 °C until ready for use.
2.7. Preparation of Homogenates
Adult zebrafish tissues were pooled (five to ten fish per tissue type) and collected for N-glycosylated protein analysis. Collected tissues were resuspended in RIPA buffer (PBS, 1% Triton X-100, 0.5% sodium deoxycholate, 0.1% SDS) plus protease inhibitor cocktail set III (EMD Biosciences, San Diego, CA, USA) and sonicated, followed by centrifugation. Supernatants were collected, followed by the addition of SDS-PAGE sample buffer containing DTT to reduce and denature the samples for lectin blotting and Coomassie blue staining.
2.8. Lectin Blots and Coomassie Blue-Stained Gels
The evaluation of proteins from tissue homogenate was conducted using Coomassie staining and lectin blotting techniques. The proteins were allowed to migrate on 10% SDS gels at 20 mA. Post migration, gels were either stained with Coomassie
® Brilliant Blue (MP Biomedical, Solon, OH, USA) or utilized to transfer proteins to a PVDF membrane (Whatman, Dassel, Germany) for lectin blotting, following previously established protocols [
12]. The transferred proteins were then probed with
Galanthus nivalis lectin (GNL lectin, Vector Laboratories, Burlingame, CA, USA). Image J 1.54d software was used for analysis of lectin blots and Coomassie blue-stained gels. Densitometric quantification of total band intensities per lane of lectin blots were normalized to total protein loading via Coomassie blue-stained gels, and then samples were normalized to
mgat1+/+ and Wt AB.
2.9. Tail-Coiling Assay
Embryos (24 hpf) [
16] were individually placed into a 100 mm dish containing egg water and placed under a microscope for observation. An acclimation period of 1 min was followed by a 60 s testing period. The number of times the larvae’s tail coiled was measured through manual computation and the experimental procedure examined 50 embryos for Wt AB,
mgat1b−/−, and
mgat1a+/− fish strains, and 54 embryos for
mgat1a−/−. During the procedure, it was noted that all embryos had heartbeats. After the procedure, the embryos were collected for genotyping. The data were collected blindly for
mgat1a−/− and
mgat1a+/−. In short,
mgat1a−/− were crossed with
mgat1a+/−, and then the tail-coiling assay was performed at 24 hpf. After assay, embryos were genotyped. The assay was performed on two separate days and in both cases about 50% of the embryos were
mgat1−/− and the remainder was
mgat1a+/−.
2.10. Swimming Locomotor Activity
Adult Wt AB (
n = 17),
mgat1a−/− (
n = 37), and
mgat1b−/− (
n = 28) mutant fish were used to assay swimming distance with minor modifications, as previously described by Khotimah et al., 2015 [
17]. In all cases, adult fish were of similar age and size. The vessel utilized was a 1.8 L tank (23 cm (L) × 5.5 cm (W) × 12 cm (H)), which had three vertical lines drawn on the bottom at equal distances of about 5.75 cm and contained 1.5 L of system water. The total distance swam correlated to the number of lines crossed. Each fish was placed into the tank and allowed to acclimate for five minutes, and then the number of lines crossed by the fish was counted for 5 min. Post recording, the fish was removed from the test tank and transferred to a separate tank. All fish were returned to the rack system following completion of the assay.
2.11. Novel Tank Dive Assay
The novel tank dive assay was used to assess anxiety-like behavior in adult fish of a similar age and size. A 1000 mL beaker with a line drawn at the 450 mL graduation mark to separate the beaker into lower and upper portions was used as the anxiety-inducing novel tank. Wt AB, the mgat1b−/− and the mgat1a−/− were individually placed in a beaker containing 1000 mL of system water and allowed five seconds to acclimate, followed by five minutes of observation of fish activity. Latency (time for fish to initially enter the upper chamber), number of times fish crossed the line to enter upper chamber, and total time spent in upper chamber were recorded. The number of fish used per strain was 20; 33 were used for Wt AB.
2.12. Touch-Evoked
A touch-evoked escape response assay was performed with embryos and larvae at 2 and 3 dpf for Wt AB (n = 40) and mgat1a−/− (n = 45). Fish were manually dechorionated using needles, if needed. After at least 1 h post dechorionation, 15 larvae were transferred to a 100 mm dish containing egg water and allowed to acclimate on a stereoscope for 10 min. A tactile stimulus was applied by a gentle touch to the tail of the larvae with a P10 micropipette tip. The escape behavior was tallied according to the number of touches it took before the larvae swam away (response).
2.13. Statistical Analysis
Adobe Photoshop was employed for agarose gel and lectin blot pictures. Origin 9.55 was used for graphics and statistics. A statistical comparison of two groups was accomplished using unpaired Student’s t-test and three or more groups were compared using one-way ANOVA with Bonholm’s adjustments. Statistical differences between data groups were also determined via Cohen’s d using Excel version 2502. Data are shown as the mean ± S.E. where n represents the number of observations, as indicated.
4. Discussion
Previously, our lab established that embryo and larvae zebrafish had decreased survivability, delayed development, and deficient sensory and motor function when one (GnT-Ib) of the GnT-I enzymes (GnT-Ia/b) was knocked out [
12,
13]. Here, our research was broadened to assess the expression pattern and harmful consequences of a global reduction in GnT-Ia in zebrafish, and furthermore to compare the mutant
mgat1a and
mgat1b zebrafish models, particularly in adult fish. A comparison of
mgat1a+/− to
mgat1a−/− fish lines revealed similarities in embryonic survivability, onset of heartbeat, and embryonic and larvae motor and sensory functions, indicating that off-target effects were virtually absent. Increased levels of oligomannose were detected in embryos and various dissected tissues of adult fish when the expression of
mgat1a was reduced, which also occurred in the
mgat1b mutant zebrafish model [
12,
13]. These results indicated that the
mgat1a/b genes do not fully compensate for each other. In a direct comparison of the
mgat1 mutant models, we observed that oligomannose levels were higher in spinal cord, skeletal muscle, heart, skin, and swim bladder for the
mgat1a fish, while they were quite similar in brain. These increases in oligomannose N-glycans correspond with decreases in complex N-glycans, as established by the down-regulation of the
mgat1b zebrafish model [
12,
13], the
Mgat1 mice models [
14,
15], and
Mgat1 in neuroblastoma (NB) [
21,
22] and Chinese hamster ovary (CHO) [
23] cell lines. Dissimilar band patterns were also observed on lectin blots of
mgat1a and
mgat1b, supporting differences in the expression of oligomannosylated proteins. Our results indicated that
mgat1a was more widely expressed than
mgat1b in adult fish, as well as embryos. A similar finding was observed for
mgat1a/b expression data during the development of zebrafish [
18]. Next, it was shown that motor function was more deficient in embryo, larvae, and adult
mgat1b fish. Further the
mgat1b displayed the strongest anxiety-like behavior and
mgat1a fish had the lowest anxiety, while Wt AB had an intermediate level. Taken together, these results support that the replacement of complex/hybrid N-glycans with oligomannose N-glycans on proteins in the two
mgat1 zebrafish models had different effects. Moreover, the changes in N-glycan populations of both
mgat1 models have differing impacts on motor function and anxiety-like behavior.
Regarding the
Mgat1 mouse model, there are implications for neuronal and locomotor malfunction [
14]. Further when some of the complex-type N-glycans were substituted with oligomannose-type N-glycans in the
mgat1b mutant fish, the spinal cord caudal primary motor (CaP) neurons were shown to be poorly developed up to 76 hpf, and delays in muscle development were evident [
12,
13]. Since
mgat1a mutant fish have decreased complex-type N-glycans, like the
mgat1b mutant fish, we anticipate that the CaP neurons in the
mgat1a mutant fish have maldeveloped CaP neurons. Delays in neuron and muscle development are supported by the deficiency in motor activity, as spontaneous tail-coiling of the embryos is facilitated by axial muscle innervation by the primary motor neurons [
24,
25]. Defects in motor and sensory functions were also evident based on touch-evoked response assays. CaP neurons, along with other primary motor neurons, innervate the ventral musculature to mediate the large-amplitude muscle contraction by tactile stimuli [
26,
27,
28,
29]. Our data also showed that deficient motor activity and altered anxiety-like behavior persisted into adulthood. Thus, maldevelopment of muscular and spinal control, along with brain function, occur due to perturbations in terminal N-glycan processing by either GnT-Ia or GnT-Ib.
The interaction between the nervous system and muscle to enable movement was defective in the
mgat1 zebrafish lines. The innervation of the ventral musculature by the spinal cord primary motor neurons was more delayed in the
mgat1b−/− than the
mgat1a−/− embryos, as indicated by the spontaneous tail-coiling assay. In comparing the touch-evoked response of the two fish lines, the number of
mgat1b [
12] and
mgat1a embryos (2 dpf) lacking response to touch was quite similar, while the number of non-responders among the
mgat1b larvae [
12] was greater than that among the
mgat1a larvae (3 dpf). A comparison of
mgat1a and
mgat1b transcript levels further supports that the
mgat1b mutant fish are more deficient in embryonic motor activity, along with the motor and sensory functions of embryos and larvae. For instance, the cholinergic-enriched motor neurons of the spinal cord express much higher levels of
mgat1b transcripts than
mgat1a from 14 to 82 hpf [
18]. The sensory neurons of the dorsal spine express both
mgat1a and
mgat1b from 48 to 82 hpf, with the expression of
mgat1b being higher from 72 to 82 hpf [
18]. Furthermore, the brain has elevated expression levels of
mgat1b relative to
mgat1a in the hind brain and dienephalon–tuberculum, which are essential for sensory and motor functions [
18,
30,
31]. Additionally, deficiencies in the motor activity of adult
mgat1 mutant fish were observed, with a more defects in
mgat1b fish, indicating that impaired muscular, brain, and spinal control persisted into adulthood for both
mgat1a and
mgat1b mutant fish, with more detrimental effects on the
mgat1b−/− fish. Hence, we suspect that decreases in the activity of GnT-I would contribute to neurodevelopmental disorders.
Anxiety-like behavior was decreased and increased in
mgat1a−/− and
mgat1b−/− fish, respectively, compared to Wt AB. This was shown using the novel tank dive assay as
mgat1a−/− fish made their first entrance to the upper chamber in the shortest time and resided in the upper chamber for the longest time, while the
mgat1b−/− took the longest time to swim to the upper chamber and spent the least amount of time in the upper chamber. The adult
mgat1b−/− zebrafish showed significant alterations to glycan profiles of the brain relative to Wt AB [
12]. Moreover, the lectin blots supported increases in different oligomannosylated proteins of brain between
mgat1b−/− and
mgat1a−/− zebrafish. This difference is quite apparent in brain region 1, which includes the region recently identified as being equivalent to the human amygdala, responsible for fear and anxiety behaviors [
32,
33]. Stress response has also been related to large tyrosine hydroxylase dopaminergic neurons of the paraventricular nucleus [
31]. Taken together, it may be that these differing impacts on anxiety-like behavior are related to GnT-I a/b activity in different areas of the brain.
CDG, an ever-growing group of metabolic diseases caused by underglycosylation and aberrant terminal N-glycosylation processing, is multisystemic, and frequently causes developmental delays, ataxia, psychomotor retardation, and anxiety [
3,
4,
5,
6,
7]. The
mgat1a/b mutant zebrafish models provide a feasible route to directly address how reduced terminal N-glycosylation processing can affect various organs. Since CDG patients often have deficient motor activity, it would be of interest to reintroduce
mgat1a/b expression in spinal cord primary motor neurons of the
mgat1a/b zebrafish models. Further, the role of Kv3 channels in spinal cord primary motor neurons of the various models should be evaluated, as Kv3 channels are critical components of these neurons [
34,
35] and disruptions in Kv3 expression and activity are associated with aberrant axonal pathfinding [
36] and deficiencies in locomotor activity [
34,
35].