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Article

Enhanced Adsorption of Cage-Shaped Proteins on Carbon Surfaces by Carbon Nanotube (CNT)-Binding Peptide Aptamers

1
Graduate School of Engineering, Osaka University, 2-8 Yamadaoka, Suita 565-0871, Osaka, Japan
2
Division of Materials Science, Nara Institute of Science and Technology, Ikoma 630-0192, Nara, Japan
*
Author to whom correspondence should be addressed.
Biophysica 2024, 4(2), 256-266; https://doi.org/10.3390/biophysica4020018
Submission received: 15 April 2024 / Revised: 13 May 2024 / Accepted: 22 May 2024 / Published: 24 May 2024
(This article belongs to the Collection Feature Papers in Biophysics)

Abstract

The adsorption behavior of recombinant cage-shaped proteins with carbon nanotube (CNT)-binding peptides on carbon surfaces was quantitatively and dynamically analyzed using a highly stable quartz crystal microbalance (QCM). Two types of CNT-binding peptide aptamers obtained by the phage display method were attached to the N- and C-termini of the Dps (DNA-binding protein derived from starved cells) to produce carbonaceous material-binding Dps. The carbon adsorption ability of the mutant Dps was studied by QCM measurement using a carbon-coated QCM sensor. The produced peptide aptamer-modified Dps showed higher affinity than a wild Dps and also showed higher adsorption capacity than a previously used Dps with carbon nanohorn-binding peptides. The newly obtained peptide aptamers were proven to provide Dps with high adsorption affinity on carbon surfaces. Furthermore, the aptamer modified to the N-terminus of the Dps subunit showed more efficient adsorption than the aptamers attached to the C-terminus of the Dp, and the linker was found to improve the adsorption ability.
Keywords: QCM; Dps; aptamer; phage display; CNT QCM; Dps; aptamer; phage display; CNT

Share and Cite

MDPI and ACS Style

Ganbaatar, N.; Chu, T.-C.; Okamoto, N.; Iwahori, K.; Nakamura, M.; Yamashita, I. Enhanced Adsorption of Cage-Shaped Proteins on Carbon Surfaces by Carbon Nanotube (CNT)-Binding Peptide Aptamers. Biophysica 2024, 4, 256-266. https://doi.org/10.3390/biophysica4020018

AMA Style

Ganbaatar N, Chu T-C, Okamoto N, Iwahori K, Nakamura M, Yamashita I. Enhanced Adsorption of Cage-Shaped Proteins on Carbon Surfaces by Carbon Nanotube (CNT)-Binding Peptide Aptamers. Biophysica. 2024; 4(2):256-266. https://doi.org/10.3390/biophysica4020018

Chicago/Turabian Style

Ganbaatar, Narangerel, Ting-Chieh Chu, Naofumi Okamoto, Kenji Iwahori, Masakazu Nakamura, and Ichiro Yamashita. 2024. "Enhanced Adsorption of Cage-Shaped Proteins on Carbon Surfaces by Carbon Nanotube (CNT)-Binding Peptide Aptamers" Biophysica 4, no. 2: 256-266. https://doi.org/10.3390/biophysica4020018

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