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Proteomes, Volume 11, Issue 4

December 2023 - 12 articles

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Articles (12)

  • Article
  • Open Access
1 Citations
2,806 Views
20 Pages

Deep Proteomic Investigation of Metabolic Adaptation in Mycobacteria under Different Growth Conditions

  • Mariia Zmyslia,
  • Klemens Fröhlich,
  • Trinh Dao,
  • Alexander Schmidt and
  • Claudia Jessen-Trefzer

7 December 2023

Understanding the complex mechanisms of mycobacterial pathophysiology and adaptive responses presents challenges that can hinder drug development. However, employing physiologically relevant conditions, such as those found in human macrophages or sim...

  • Review
  • Open Access
27 Citations
6,086 Views
29 Pages

Post-Translational Modifications in Histones and Their Role in Abiotic Stress Tolerance in Plants

  • Madhvi Sharma,
  • Amanpreet K. Sidhu,
  • Mahesh Kumar Samota,
  • Mamta Gupta,
  • Pushpendra Koli and
  • Mukesh Choudhary

22 November 2023

Abiotic stresses profoundly alter plant growth and development, resulting in yield losses. Plants have evolved adaptive mechanisms to combat these challenges, triggering intricate molecular responses to maintain tissue hydration and temperature stabi...

  • Review
  • Open Access
13 Citations
5,568 Views
23 Pages

Anti-Cancer Properties of Flaxseed Proteome

  • Yulia Merkher,
  • Elizaveta Kontareva,
  • Anastasia Alexandrova,
  • Rajesha Javaraiah,
  • Margarita Pustovalova and
  • Sergey Leonov

16 November 2023

Flaxseed has been recognized as a valuable source of nutrients and bioactive compounds, including proteins that possess various health benefits. In recent years, studies have shown that flaxseed proteins, including albumins, globulins, glutelin, and...

  • Article
  • Open Access
2 Citations
3,572 Views
20 Pages

Proteome-Wide Profiling Using Sample Multiplexing of a Human Cell Line Treated with Cannabidiol (CBD) and Tetrahydrocannabinol (THC)

  • Morteza Abyadeh,
  • Vivek Gupta,
  • Xinyue Liu,
  • Valentina Rossio,
  • Mehdi Mirzaei,
  • Jennifer Cornish,
  • Joao A. Paulo and
  • Paul A. Haynes

2 November 2023

Cannabis has been used historically for both medicinal and recreational purposes, with the most notable cannabinoids being cannabidiol (CBD) and tetrahydrocannabinol (THC). Although their therapeutic effects have been well studied and their recreatio...

  • Article
  • Open Access
12 Citations
4,195 Views
26 Pages

Benefits of FAIMS to Improve the Proteome Coverage of Deteriorated and/or Cross-Linked TMT 10-Plex FFPE Tissue and Plasma-Derived Exosomes Samples

  • Ana Montero-Calle,
  • María Garranzo-Asensio,
  • Raquel Rejas-González,
  • Jaime Feliu,
  • Marta Mendiola,
  • Alberto Peláez-García and
  • Rodrigo Barderas

24 October 2023

The proteome characterization of complex, deteriorated, or cross-linked protein mixtures as paired clinical FFPE or exosome samples isolated from low plasma volumes (250 µL) might be a challenge. In this work, we aimed at investigating the bene...

  • Review
  • Open Access
65 Citations
10,998 Views
14 Pages

20 October 2023

Multi-omics is a cutting-edge approach that combines data from different biomolecular levels, such as DNA, RNA, proteins, metabolites, and epigenetic marks, to obtain a holistic view of how living systems work and interact. Multi-omics has been used...

  • Review
  • Open Access
7 Citations
5,796 Views
27 Pages

Unveiling the Molecular Footprint: Proteome-Based Biomarkers for Alzheimer’s Disease

  • Mukul Jain,
  • Rupal Dhariwal,
  • Nil Patil,
  • Sandhya Ojha,
  • Reshma Tendulkar,
  • Mugdha Tendulkar,
  • Parmdeep Singh Dhanda,
  • Alpa Yadav and
  • Prashant Kaushik

16 October 2023

Alzheimer’s disease (AD) is a devastating neurodegenerative disorder characterized by progressive cognitive decline and memory loss. Early and accurate diagnosis of AD is crucial for implementing timely interventions and developing effective th...

  • Article
  • Open Access
2 Citations
5,598 Views
21 Pages

Identification of Plasma Biomarkers from Rheumatoid Arthritis Patients Using an Optimized Sequential Window Acquisition of All THeoretical Mass Spectra (SWATH) Proteomics Workflow

  • Liang Jin,
  • Fei Wang,
  • Xue Wang,
  • Bohdan P. Harvey,
  • Yingtao Bi,
  • Chenqi Hu,
  • Baoliang Cui,
  • Anhdao T. Darcy,
  • John W. Maull and
  • Ben R. Phillips
  • + 4 authors

16 October 2023

Rheumatoid arthritis (RA) is a systemic autoimmune and inflammatory disease. Plasma biomarkers are critical for understanding disease mechanisms, treatment effects, and diagnosis. Mass spectrometry-based proteomics is a powerful tool for unbiased bio...

  • Article
  • Open Access
2 Citations
2,858 Views
15 Pages

12 October 2023

Trophoblast migration and invasion play crucial roles in placental development. However, the effects of (-)-epigallocatechin-3-gallate (EGCG) on trophoblast cell functions remain largely unexplored. In this study, we investigated the impact of EGCG o...

  • Article
  • Open Access
8 Citations
3,586 Views
13 Pages

The yeast Saccharomyces cerevisiae is a powerful model system that is often used to expand our understanding of cellular processes and biological functions. Although many genetically well-characterized laboratory strains of S. cerevisiae are availabl...

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Proteomes - ISSN 2227-7382