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Proteomes, Volume 11, Issue 1

March 2023 - 10 articles

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Articles (10)

  • Article
  • Open Access
9 Citations
5,030 Views
17 Pages

Optimized Proteome Reduction for Integrative Top–Down Proteomics

  • Breyer Woodland,
  • Aleksandar Necakov and
  • Jens R. Coorssen

Integrative top–down proteomics is an analytical approach that fully addresses the breadth and complexity needed for effective and routine assessment of proteomes. Nonetheless, any such assessments also require a rigorous review of methodology...

  • Article
  • Open Access
6 Citations
3,976 Views
18 Pages

Analysis of the Interactome of the Toxoplasma gondii Tgj1 HSP40 Chaperone

  • Jonathan Munera López,
  • Andrés Mariano Alonso,
  • Maria Julia Figueras,
  • Ana María Saldarriaga Cartagena,
  • Miryam A. Hortua Triana,
  • Luis Diambra,
  • Laura Vanagas,
  • Bin Deng,
  • Silvia N. J. Moreno and
  • Sergio Oscar Angel

Toxoplasma gondii is an obligate intracellular apicomplexan that causes toxoplasmosis in humans and animals. Central to its dissemination and pathogenicity is the ability to rapidly divide in the tachyzoite stage and infect any type of nucleated cell...

  • Article
  • Open Access
2 Citations
3,950 Views
20 Pages

Non-Specific Signal Peptidase Processing of Extracellular Proteins in Staphylococcus aureus N315

  • Santosh A. Misal,
  • Shital D. Ovhal,
  • Sujun Li,
  • Jonathan A. Karty,
  • Haixu Tang,
  • Predrag Radivojac and
  • James P. Reilly

11 February 2023

Staphylococcus aureus is one of the major community-acquired human pathogens, with growing multidrug-resistance, leading to a major threat of more prevalent infections to humans. A variety of virulence factors and toxic proteins are secreted during i...

  • Article
  • Open Access
3 Citations
3,070 Views
15 Pages

For potato crops, host resistance is currently the most effective and sustainable tool to manage diseases caused by the plasmodiophorid Spongospora subterranea. Arguably, zoospore root attachment is the most critical phase of infection; however, the...

  • Article
  • Open Access
2 Citations
3,643 Views
17 Pages

Comprehensive Kinase Activity Profiling Revealed the Kinase Activity Patterns Associated with the Effects of EGFR Tyrosine Kinase Inhibitor Therapy in Advanced Non-Small-Cell Lung Cancer Patients with Sensitizing EGFR Mutations

  • Rei Noguchi,
  • Akihiro Yoshimura,
  • Junji Uchino,
  • Takayuki Takeda,
  • Yusuke Chihara,
  • Takayo Ota,
  • Osamu Hiranuma,
  • Hiroshi Gyotoku,
  • Koichi Takayama and
  • Tadashi Kondo

EGFR mutations are strong predictive markers for EGFR tyrosine kinase inhibitor (EGFR-TKI) therapy in patients with non-small-cell lung cancer (NSCLC). Although NSCLC patients with sensitizing EGFR mutations have better prognoses, some patients exhib...

  • Review
  • Open Access
4 Citations
3,279 Views
14 Pages

Unlike a prevalent expectation that tumor cells secrete tumor-promoting proteins and stimulate the progression of neighboring tumor cells, accumulating evidence indicates that the role of tumor-secreted proteins is double-edged and context-dependent....

  • Article
  • Open Access
11 Citations
5,707 Views
20 Pages

Characterisation of Colorectal Cancer Cell Lines through Proteomic Profiling of Their Extracellular Vesicles

  • Kathleen A. Heck,
  • Håvard T. Lindholm,
  • Barbara Niederdorfer,
  • Eirini Tsirvouli,
  • Martin Kuiper,
  • Åsmund Flobak,
  • Astrid Lægreid and
  • Liv Thommesen

Colorectal cancer (CRC) is one of the most prevalent cancers, driven by several factors including deregulations in intracellular signalling pathways. Small extracellular vesicles (sEVs) are nanosized protein-packaged particles released from cells, wh...

  • Review
  • Open Access
10 Citations
8,608 Views
66 Pages

Proteomics continues to forge significant strides in the discovery of essential biological processes, uncovering valuable information on the identity, global protein abundance, protein modifications, proteoform levels, and signal transduction pathway...

  • Review
  • Open Access
13 Citations
4,991 Views
18 Pages

The Need for Biomarkers in the ALS–FTD Spectrum: A Clinical Point of View on the Role of Proteomics

  • Francesca Vignaroli,
  • Angelica Mele,
  • Giacomo Tondo,
  • Veronica De Giorgis,
  • Marcello Manfredi,
  • Cristoforo Comi,
  • Letizia Mazzini and
  • Fabiola De Marchi

Frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS) are severely debilitating and progressive neurodegenerative disorders. A distinctive pathological feature of several neurodegenerative diseases, including ALS and FTD, is the depos...

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Proteomes - ISSN 2227-7382