Precision Medicine in Diabetic Retinopathy: The Role of Genetic and Epigenetic Biomarkers
Abstract
1. Introduction
Data Collection
2. Pathogenesis of Diabetic Retinopathy
2.1. Molecular Mechanisms
2.2. Neurovascular and Inflammatory Pathways
3. Current Clinical Biomarkers in Diabetic Retinopathy
3.1. Biochemical Biomarkers
3.2. Inflammatory Biomarkers
3.3. Angiogenic Biomarkers
3.4. Imaging Biomarkers
4. Genetic Biomarkers of Diabetic Retinopathy
4.1. Angiogenesis Pathway
4.2. Inflammation Pathway
4.3. Oxidative Stress Pathway
4.4. Emerging Biomarkers from Omics Technologies
4.5. Critical Appraisal of Previous Research
5. Non-Coding RNA Molecules and Epigenetic Modifiers in the Pathogenesis of Diabetic Retinopathy
5.1. MicroRNA in the Regulation of Diabetic Retinopathy
5.2. Long-Chain Non-Coding RNA (lncRNA) in the Regulation of Diabetic Retinopathy
6. Genetic–Environmental Interactions in Diabetic Retinopathy
7. Precision Medicine in Diabetic Retinopathy Management
7.1. Pharmacogenomics and Personalised Therapy
7.2. AI and Multi-Omics Integration
7.3. Ethical and Clinical Implementation Challenges
8. Future Directions and Research Priorities
9. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Acknowledgments
Conflicts of Interest
References
- Sun, H.; Saeedi, P.; Karuranga, S.; Pinkepank, M.; Ogurtsova, K.; Duncan, B.B.; Stein, C.; Basit, A.; Chan, J.C.N.; Mbanya, J.C.; et al. IDF Diabetes Atlas: Global, Regional and Country-Level Diabetes Prevalence Estimates for 2021 and Projections for 2045. Diabetes Res. Clin. Pract. 2022, 183, 109119. [Google Scholar] [CrossRef]
- Rai, B.B.; Essex, R.W.; Morley, M.G.; Bernstein, P.S.; van Kleef, J.P.; Maddess, T. Prevalence and severity of diabetic retinopathy at first presentation to vitreoretinal services in Bhutan: A 3-year national study. Jpn. J. Ophthalmol. 2023, 67, 287–294. [Google Scholar] [CrossRef]
- Magliano, D.J.; Boyko, E.J. IDF Diabetes Atlas, 10th ed.; International Diabetes Federation: Brussels, Belgium, 2021; pp. 21–30. ISBN 978-2-930229-98-0. [Google Scholar]
- Thomas, R.L.; Dunstan, F.D.; Luzio, S.D.; Chowdhury, S.R.; North, R.V.; Hale, S.L.; Gibbins, R.L.; Owens, D.R. Prevalence of Diabetic Retinopathy within a National Diabetic Retinopathy Screening Service. Br. J. Ophthalmol. 2015, 99, 64–68. [Google Scholar] [CrossRef]
- Teo, Z.L.; Tham, Y.-C.; Yu, M.; Chee, M.L.; Rim, T.H.; Cheung, N.; Bikbov, M.M.; Wang, Y.X.; Tang, Y.; Lu, Y.; et al. Global Prevalence of Diabetic Retinopathy and Projection of Burden through 2045. Ophthalmology 2021, 128, 1580–1591. [Google Scholar] [CrossRef] [PubMed]
- VanderBeek, B.L.; Yu, Y.; Cardillo, S.; Hubbard, R. Twenty-Year Trends in Prevalence and Incidence of Diabetic Retinal Disease. Ophthalmology 2025, 132, 767–774. [Google Scholar] [CrossRef] [PubMed]
- Kaštelan, S.; Orešković, I.; Bišćan, F.; Kaštelan, H.; Gverović Antunica, A. Inflammatory and Angiogenic Biomarkers in Diabetic Retinopathy. Biochem. Med. 2020, 30, 385–399. [Google Scholar] [CrossRef]
- Wang, W.; Lo, A.C.Y. Diabetic Retinopathy: Pathophysiology and Treatments. Int. J. Mol. Sci. 2018, 19, 1816. [Google Scholar] [CrossRef]
- Singh, R.; Walia, A.; Kaur, J.; Kumar, P.; Verma, I.; Rani, N. Diabetic Retinopathy—Pathophysiology to Treatment: A Review. Curr. Diabetes Rev. 2025, 21, 58–67. [Google Scholar] [CrossRef]
- Marques, L.; Costa, B.; Pereira, M.; Silva, A.; Santos, J.; Saldanha, L.; Silva, I.; Magalhães, P.; Schmidt, S.; Vale, N. Advancing Precision Medicine: A Review of Innovative In Silico Approaches for Drug Development, Clinical Pharmacology and Personalized Healthcare. Pharmaceutics 2024, 16, 332. [Google Scholar] [CrossRef] [PubMed]
- Gloyn, A.L.; Drucker, D.J. Precision Medicine in the Management of Type 2 Diabetes. Lancet Diabetes Endocrinol. 2018, 6, 891–900. [Google Scholar] [CrossRef]
- Pei, X.; Huang, D.; Li, Z. Genetic Insights and Emerging Therapeutics in Diabetic Retinopathy: From Molecular Pathways to Personalized Medicine. Front. Genet. 2024, 15, 1416924. [Google Scholar] [CrossRef]
- Delpierre, C.; Lefèvre, T. Precision and Personalized Medicine: What Their Current Definition Says and Silences about the Model of Health They Promote. Implication for the Development of Personalized Health. Front. Sociol. 2023, 8, 1112159. [Google Scholar] [CrossRef] [PubMed]
- Akhoon, N. Precision Medicine: A New Paradigm in Therapeutics. Int. J. Prev. Med. 2021, 12, 12. [Google Scholar] [CrossRef] [PubMed]
- Denny, J.C.; Collins, F.S. Precision Medicine in 2030—Seven Ways to Transform Healthcare. Cell 2021, 184, 1415–1419. [Google Scholar] [CrossRef]
- Kuo, J.Z.; Wong, T.Y.; Rotter, J.I. Challenges in Elucidating the Genetics of Diabetic Retinopathy. JAMA Ophthalmol. 2014, 132, 96. [Google Scholar] [CrossRef]
- Mellor, J.; Jeyam, A.; Beulens, J.W.J.; Bhandari, S.; Broadhead, G.; Chew, E.; Fickweiler, W.; van der Heijden, A.; Gordin, D.; Simó, R.; et al. Role of Systemic Factors in Improving the Prognosis of Diabetic Retinal Disease and Predicting Response to Diabetic Retinopathy Treatment. Ophthalmol. Sci. 2024, 4, 100494. [Google Scholar] [CrossRef]
- Sienkiewicz-Szłapka, E.; Fiedorowicz, E.; Król-Grzymała, A.; Kordulewska, N.; Rozmus, D.; Cieślińska, A.; Grzybowski, A. The Role of Genetic Polymorphisms in Diabetic Retinopathy: Narrative Review. Int. J. Mol. Sci. 2023, 24, 15865. [Google Scholar] [CrossRef]
- Perais, J.; Agarwal, R.; Evans, J.R.; Loveman, E.; Colquitt, J.L.; Owens, D.; Hogg, R.E.; Lawrenson, J.G.; Takwoingi, Y.; Lois, N. Prognostic Factors for the Development and Progression of Proliferative Diabetic Retinopathy in People with Diabetic Retinopathy. Cochrane Database Syst. Rev. 2023, 2023, CD013775. [Google Scholar] [CrossRef]
- Cappellani, F.; Regillo, C.D.; Haller, J.A.; Gagliano, C.; Pulido, J.S. Exploring the Associated Genetic Causes of Diabetic Retinopathy as a Model of Inflammation in Retinal Diseases. Int. J. Mol. Sci. 2024, 25, 5456. [Google Scholar] [CrossRef]
- Martin-Sanchez, F.; Lázaro, M.; López-Otín, C.; Andreu, A.L.; Cigudosa, J.C.; Garcia-Barbero, M. Personalized Precision Medicine for Health Care Professionals: Development of a Competency Framework. JMIR Med. Educ. 2023, 9, e43656. [Google Scholar] [CrossRef]
- Cho, H.; Sobrin, L. Genetics of Diabetic Retinopathy. Curr. Diab Rep. 2014, 14, 515. [Google Scholar] [CrossRef]
- Simó-Servat, O.; Hernández, C.; Simó, R. Genetics in Diabetic Retinopathy: Current Concepts and New Insights. Curr. Genom. 2013, 14, 289–299. [Google Scholar] [CrossRef]
- Bhatwadekar, A.D.; Shughoury, A.; Belamkar, A.; Ciulla, T.A. Genetics of Diabetic Retinopathy, a Leading Cause of Irreversible Blindness in the Industrialized World. Genes 2021, 12, 1200. [Google Scholar] [CrossRef] [PubMed]
- Milluzzo, A.; Maugeri, A.; Barchitta, M.; Sciacca, L.; Agodi, A. Epigenetic Mechanisms in Type 2 Diabetes Retinopathy: A Systematic Review. Int. J. Mol. Sci. 2021, 22, 10502. [Google Scholar] [CrossRef]
- Priščáková, P.; Minárik, G.; Repiská, V. Candidate Gene Studies of Diabetic Retinopathy in Human. Mol. Biol. Rep. 2016, 43, 1327–1345. [Google Scholar] [CrossRef]
- Kastelan, S.; Tomić, M.; Salopek-Rabatić, J.; Pavan, J.; Lukenda, A.; Gotovac, M.; Zunec, R. The Association between the HLA System and Retinopathy Development in Patients with Type 1 Diabetes Mellitus. Coll. Antropol. 2013, 37, 65–70. [Google Scholar]
- Li, J.Q.; Welchowski, T.; Schmid, M.; Letow, J.; Wolpers, C.; Pascual-Camps, I.; Holz, F.G.; Finger, R.P. Prevalence, Incidence and Future Projection of Diabetic Eye Disease in Europe: A Systematic Review and Meta-Analysis. Eur. J. Epidemiol. 2020, 35, 11–23. [Google Scholar] [CrossRef]
- Gameiro, G.R.; Sinkunas, V.; Liguori, G.R.; Auler-Júnior, J.O.C. Precision Medicine: Changing the Way We Think about Healthcare. Clinics 2018, 73, e723. [Google Scholar] [CrossRef] [PubMed]
- Han, J.; Lando, L.; Skowronska-Krawczyk, D.; Chao, D.L. Genetics of Diabetic Retinopathy. Curr. Diab Rep. 2019, 19, 67. [Google Scholar] [CrossRef]
- Bora, A.; Balasubramanian, S.; Babenko, B.; Virmani, S.; Venugopalan, S.; Mitani, A.; de Oliveira Marinho, G.; Cuadros, J.; Ruamviboonsuk, P.; Corrado, G.S.; et al. Predicting the Risk of Developing Diabetic Retinopathy Using Deep Learning. Lancet Digit. Health 2021, 3, e10–e19. [Google Scholar] [CrossRef] [PubMed]
- Wong, T.Y.; Cheung, C.M.G.; Larsen, M.; Sharma, S.; Simó, R. Diabetic Retinopathy. Nat. Rev. Dis. Primers 2016, 2, 16012. [Google Scholar] [CrossRef]
- Ting, D.S.W.; Cheung, G.C.M.; Wong, T.Y. Diabetic Retinopathy: Global Prevalence, Major Risk Factors, Screening Practices and Public Health Challenges: A Review. Clin. Exp. Ophthalmol. 2016, 44, 260–277. [Google Scholar] [CrossRef]
- Rasoulinejad, S.A. Evaluating the Risk Factors of Development and Progression of Diabetic Retinopathy: A Review Study. Shiraz E Med. J. 2022, 23, e117171. [Google Scholar] [CrossRef]
- Mishra, S.; Vishwakarma, P.K.; Tripathi, M.; Ojha, S.; Tripathi, S.M. Diabetic Retinopathy: Clinical Features, Risk Factors, and Treatment Options. Curr. Diabetes Rev. 2024, 20, e271023222871. [Google Scholar] [CrossRef]
- Wilkinson, C.P.; Ferris, F.L.; Klein, R.E.; Lee, P.P.; Agardh, C.D.; Davis, M.; Dills, D.; Kampik, A.; Pararajasegaram, R.; Verdaguer, J.T. Proposed International Clinical Diabetic Retinopathy and Diabetic Macular Edema Disease Severity Scales. Ophthalmology 2003, 110, 1677–1682. [Google Scholar] [CrossRef] [PubMed]
- Li, H.; Jia, W.; Vujosevic, S.; Sabanayagam, C.; Grauslund, J.; Sivaprasad, S.; Wong, T.Y. Current Research and Future Strategies for the Management of Vision-Threatening Diabetic Retinopathy. Asia-Pac. J. Ophthalmol. 2024, 13, 100109. [Google Scholar] [CrossRef]
- Scanlon, P.H. Improving the Screening of Risk Factors in Diabetic Retinopathy. Expert. Rev. Endocrinol. Metab. 2022, 17, 235–243. [Google Scholar] [CrossRef]
- Nilay, A.; Thool, A.R. A Review of Pathogenesis and Risk Factors of Diabetic Retinopathy With Emphasis on Screening Techniques. Cureus 2022, 14, e31062. [Google Scholar] [CrossRef] [PubMed]
- Gomułka, K.; Ruta, M. The Role of Inflammation and Therapeutic Concepts in Diabetic Retinopathy—A Short Review. Int. J. Mol. Sci. 2023, 24, 1024. [Google Scholar] [CrossRef] [PubMed]
- Wei, L.; Sun, X.; Fan, C.; Li, R.; Zhou, S.; Yu, H. The Pathophysiological Mechanisms Underlying Diabetic Retinopathy. Front. Cell Dev. Biol. 2022, 10, 963615. [Google Scholar] [CrossRef]
- Arar, N.H.; Freedman, B.I.; Adler, S.G.; Iyengar, S.K.; Chew, E.Y.; Davis, M.D.; Satko, S.G.; Bowden, D.W.; Duggirala, R.; Elston, R.C.; et al. Heritability of the Severity of Diabetic Retinopathy: The FIND-Eye Study. Investig. Ophthalmol. Vis. Sci. 2008, 49, 3839. [Google Scholar] [CrossRef] [PubMed]
- Hietala, K.; Forsblom, C.; Summanen, P.; Groop, P.-H. Heritability of Proliferative Diabetic Retinopathy. Diabetes 2008, 57, 2176–2180. [Google Scholar] [CrossRef] [PubMed]
- Sharma, A.; Valle, M.L.; Beveridge, C.; Liu, Y.; Sharma, S. Unraveling the Role of Genetics in the Pathogenesis of Diabetic Retinopathy. Eye 2019, 33, 534–541. [Google Scholar] [CrossRef]
- Kowluru, R.A.; Santos, J.M.; Mishra, M. Epigenetic Modifications and Diabetic Retinopathy. Biomed. Res. Int. 2013, 2013, 635284. [Google Scholar] [CrossRef]
- Liu, D.-D.; Zhang, C.-Y.; Zhang, J.-T.; Gu, L.-M.; Xu, G.-T.; Zhang, J.-F. Epigenetic Modifications and Metabolic Memory in Diabetic Retinopathy: Beyond the Surface. Neural Regen. Res. 2023, 18, 1441–1449. [Google Scholar] [CrossRef] [PubMed]
- Jin, P.; Li, Z.; Xu, X.; He, J.; Chen, J.; Xu, X.; Du, X.; Bai, X.; Zhang, B.; He, X.; et al. Analysis of Association between Common Variants of Uncoupling Proteins Genes and Diabetic Retinopathy in a Chinese Population. BMC Med. Genet. 2020, 21, 25. [Google Scholar] [CrossRef]
- Kaur, A.; Kumar, R.; Sharma, A. Diabetic Retinopathy Leading to Blindness—A Review. Curr. Diabetes Rev. 2024, 20, e240124225997. [Google Scholar] [CrossRef]
- Ferrara, M.; Loda, A.; Coco, G.; Grassi, P.; Cestaro, S.; Rezzola, S.; Romano, V.; Semeraro, F. Diabetic Retinopathy: Soluble and Imaging Ocular Biomarkers. J. Clin. Med. 2023, 12, 912. [Google Scholar] [CrossRef]
- Jenkins, A.J.; Joglekar, M.V.; Hardikar, A.A.; Keech, A.C.; O’Neal, D.N.; Januszewski, A.S. Biomarkers in Diabetic Retinopathy. Rev. Diabet. Stud. 2015, 12, 159–195. [Google Scholar] [CrossRef]
- Kaštelan, S.; Tomić, M.; Gverović Antunica, A.; Salopek Rabatić, J.; Ljubić, S. Inflammation and Pharmacological Treatment in Diabetic Retinopathy. Mediat. Inflamm. 2013, 2013, 213130. [Google Scholar] [CrossRef]
- Du, X.; Yang, L.; Kong, L.; Sun, Y.; Shen, K.; Cai, Y.; Sun, H.; Zhang, B.; Guo, S.; Zhang, A.; et al. Metabolomics of Various Samples Advancing Biomarker Discovery and Pathogenesis Elucidation for Diabetic Retinopathy. Front Endocrinol. 2022, 13, 1037164. [Google Scholar] [CrossRef]
- Chondrozoumakis, G.; Chatzimichail, E.; Habra, O.; Vounotrypidis, E.; Papanas, N.; Gatzioufas, Z.; Panos, G.D. Retinal Biomarkers in Diabetic Retinopathy: From Early Detection to Personalized Treatment. J. Clin. Med. 2025, 14, 1343. [Google Scholar] [CrossRef]
- Xie, Z.; Xiao, X. Novel Biomarkers and Therapeutic Approaches for Diabetic Retinopathy and Nephropathy: Recent Progress and Future Perspectives. Front. Endocrinol. 2022, 13, 1065856. [Google Scholar] [CrossRef] [PubMed]
- Wu, F.; Phone, A.; Lamy, R.; Ma, D.; Laotaweerungsawat, S.; Chen, Y.; Zhao, T.; Ma, W.; Zhang, F.; Psaras, C.; et al. Correlation of Aqueous, Vitreous, and Plasma Cytokine Levels in Patients With Proliferative Diabetic Retinopathy. Investig. Ophthalmol. Vis. Sci. 2020, 61, 26. [Google Scholar] [CrossRef] [PubMed]
- Hou, X.-W.; Wang, Y.; Pan, C.-W. Metabolomics in Diabetic Retinopathy: A Systematic Review. Investig. Ophthalmol. Vis. Sci. 2021, 62, 4. [Google Scholar] [CrossRef]
- Tomić, M.; Ljubić, S.; Kaštelan, S.; Gverović Antunica, A.; Jazbec, A.; Poljičanin, T. Inflammation, Haemostatic Disturbance, and Obesity: Possible Link to Pathogenesis of Diabetic Retinopathy in Type 2 Diabetes. Mediat. Inflamm. 2013, 2013, 818671. [Google Scholar] [CrossRef] [PubMed]
- Tomić, M.; Ljubić, S.; Kaštelan, S. The Role of Inflammation and Endothelial Dysfunction in the Pathogenesis of Diabetic Retinopathy. Coll. Antropol. 2013, 37, 51–57. [Google Scholar]
- Kaštelan, S.; Tomić, M.; Gverović Antunica, A.; Ljubić, S.; Salopek Rabatić, J.; Karabatić, M. Body Mass Index: A Risk Factor for Retinopathy in Type 2 Diabetic Patients. Mediat. Inflamm. 2013, 2013, 436329. [Google Scholar] [CrossRef]
- Rai, B.B.; Maddess, T.; Nolan, C.J. Functional diabetic retinopathy: A new concept to improve management of diabetic retinal diseases. Surv. Ophthalmol. 2025, 70, 232–240. [Google Scholar] [CrossRef]
- Tamhane, M.; Cabrera-Ghayouri, S.; Abelian, G.; Viswanath, V. Review of Biomarkers in Ocular Matrices: Challenges and Opportunities. Pharm. Res. 2019, 36, 40. [Google Scholar] [CrossRef]
- Nawaz, I.M.; Rezzola, S.; Cancarini, A.; Russo, A.; Costagliola, C.; Semeraro, F.; Presta, M. Human Vitreous in Proliferative Diabetic Retinopathy: Characterization and Translational Implications. Prog. Retin. Eye Res. 2019, 72, 100756. [Google Scholar] [CrossRef]
- Srinivasan, S.; Sivaprasad, S.; Rajalakshmi, R.; Anjana, R.M.; Malik, R.A.; Kulothungan, V.; Raman, R.; Bhende, M. Association of OCT and OCT Angiography Measures with the Development and Worsening of Diabetic Retinopathy in Type 2 Diabetes. Eye 2023, 37, 3781–3786. [Google Scholar] [CrossRef]
- Nowroozzadeh, M.H.; Bagheri, M. The Role of Optical Coherence Tomography Angiography in Assessing Diabetic Choroidopathy: A Systematic Review. Int. J. Retin. Vitr. 2025, 11, 10. [Google Scholar] [CrossRef] [PubMed]
- Attiku, Y.; He, Y.; Nittala, M.G.; Sadda, S.R. Current Status and Future Possibilities of Retinal Imaging in Diabetic Retinopathy Care Applicable to Low- and Medium-Income Countries. Indian. J. Ophthalmol. 2021, 69, 2968–2976. [Google Scholar] [CrossRef] [PubMed]
- Parravano, M.; Cennamo, G.; Di Antonio, L.; Grassi, M.O.; Lupidi, M.; Rispoli, M.; Savastano, M.C.; Veritti, D.; Vujosevic, S. Multimodal Imaging in Diabetic Retinopathy and Macular Edema: An Update about Biomarkers. Surv. Ophthalmol. 2024, 69, 893–904. [Google Scholar] [CrossRef] [PubMed]
- Grzybowski, A.; Brona, P.; Krzywicki, T.; Ruamviboonsuk, P. Diagnostic Accuracy of Automated Diabetic Retinopathy Image Assessment Software: IDx-DR and RetCAD. Ophthalmol. Ther. 2025, 14, 73–84. [Google Scholar] [CrossRef]
- Liu, Z.; Gao, A.; Sheng, H.; Wang, X. Identification of Diabetic Retinopathy Lesions in Fundus Images by Integrating CNN and Vision Mamba Models. PLoS ONE 2025, 20, e0318264. [Google Scholar] [CrossRef]
- Tan, T.-E.; Wong, T.Y. Diabetic Retinopathy: Looking Forward to 2030. Front. Endocrinol. 2023, 13, 1077669. [Google Scholar] [CrossRef]
- Morya, A.K.; Ramesh, P.V.; Nishant, P.; Kaur, K.; Gurnani, B.; Heda, A.; Salodia, S. Diabetic Retinopathy: A Review on Its Pathophysiology and Novel Treatment Modalities. World J. Methodol. 2024, 14, 95881. [Google Scholar] [CrossRef] [PubMed]
- Li, X.; Dong, X.; Zhang, W.; Shi, Z.; Liu, Z.; Sa, Y.; Li, L.; Ni, N.; Mei, Y. Multi-Omics in Exploring the Pathophysiology of Diabetic Retinopathy. Front. Cell Dev. Biol. 2024, 12, 1500474. [Google Scholar] [CrossRef]
- Cabrera, A.P.; Monickaraj, F.; Rangasamy, S.; Hobbs, S.; McGuire, P.; Das, A. Do Genomic Factors Play a Role in Diabetic Retinopathy? J. Clin. Med. 2020, 9, 216. [Google Scholar] [CrossRef]
- Simó, R.; Sundstrom, J.M.; Antonetti, D.A. Ocular Anti-VEGF Therapy for Diabetic Retinopathy: The Role of VEGF in the Pathogenesis of Diabetic Retinopathy. Diabetes Care 2014, 37, 893–899. [Google Scholar] [CrossRef]
- Tan, G.S.; Cheung, N.; Simó, R.; Cheung, G.C.M.; Wong, T.Y. Diabetic Macular Oedema. Lancet Diabetes Endocrinol. 2017, 5, 143–155. [Google Scholar] [CrossRef]
- Bastos, C.M.C.; da Silva Machado, L.M.; Crispim, D.; Canani, L.H.; dos Santos, K.G. Association of the Rs9896052 Polymorphism Upstream of GRB2 with Proliferative Diabetic Retinopathy in Patients with Less than 10 Years of Diabetes. Int. J. Mol. Sci. 2024, 25, 10232. [Google Scholar] [CrossRef]
- Reid, G.; Lois, N. Erythropoietin in Diabetic Retinopathy. Vis. Res. 2017, 139, 237–242. [Google Scholar] [CrossRef]
- Rezzola, S.; Loda, A.; Corsini, M.; Semeraro, F.; Annese, T.; Presta, M.; Ribatti, D. Angiogenesis-Inflammation Cross Talk in Diabetic Retinopathy: Novel Insights From the Chick Embryo Chorioallantoic Membrane/Human Vitreous Platform. Front. Immunol. 2020, 11, 581288. [Google Scholar] [CrossRef]
- Yao, Y.; Du, J.; Li, R.; Zhao, L.; Luo, N.; Zhai, J.Y.; Long, L. Association between ICAM-1 Level and Diabetic Retinopathy: A Review and Meta-Analysis. Postgrad. Med. J. 2019, 95, 162–168. [Google Scholar] [CrossRef] [PubMed]
- Hovnik, T.; Dolžan, V.; Bratina, N.U.; Podkrajšek, K.T.; Battelino, T. Genetic Polymorphisms in Genes Encoding Antioxidant Enzymes Are Associated With Diabetic Retinopathy in Type 1 Diabetes. Diabetes Care 2009, 32, 2258–2262. [Google Scholar] [CrossRef] [PubMed]
- Zhou, M.; Zhang, P.; Xu, X.; Sun, X. The Relationship Between Aldose Reductase C106T Polymorphism and Diabetic Retinopathy: An Updated Meta-Analysis. Investig. Ophthalmol. Vis. Sci. 2015, 56, 2279. [Google Scholar] [CrossRef] [PubMed][Green Version]
- Abhary, S.; Hewitt, A.W.; Burdon, K.P.; Craig, J.E. A Systematic Meta-Analysis of Genetic Association Studies for Diabetic Retinopathy. Diabetes 2009, 58, 2137–2147. [Google Scholar] [CrossRef]
- Lyssenko, V.; Vaag, A. Genetics of Diabetes-Associated Microvascular Complications. Diabetologia 2023, 66, 1601–1613. [Google Scholar] [CrossRef]
- Saliminejad, K.; Khorram Khorshid, H.R.; Soleymani Fard, S.; Ghaffari, S.H. An Overview of MicroRNAs: Biology, Functions, Therapeutics, and Analysis Methods. J. Cell Physiol. 2019, 234, 5451–5465. [Google Scholar] [CrossRef] [PubMed]
- Qin, L.-L.; An, M.-X.; Liu, Y.-L.; Xu, H.-C.; Lu, Z.-Q. MicroRNA-126: A Promising Novel Biomarker in Peripheral Blood for Diabetic Retinopathy. Int. J. Ophthalmol. 2017, 10, 530–534. [Google Scholar] [CrossRef]
- Rezk, N.A.; Sabbah, N.A.; Saad, M.S.S. Role of MicroRNA 126 in Screening, Diagnosis, and Prognosis of Diabetic Patients in Egypt. IUBMB Life 2016, 68, 452–458. [Google Scholar] [CrossRef]
- Barutta, F.; Bruno, G.; Matullo, G.; Chaturvedi, N.; Grimaldi, S.; Schalkwijk, C.; Stehouwer, C.D.; Fuller, J.H.; Gruden, G. MicroRNA-126 and Micro-/Macrovascular Complications of Type 1 Diabetes in the EURODIAB Prospective Complications Study. Acta Diabetol. 2017, 54, 133–139. [Google Scholar] [CrossRef]
- Solingen, C.; Bijkerk, R.; de Boer, H.; Rabelink, T.; van Zonneveld, A. The Role of MicroRNA-126 in Vascular Homeostasis. Curr. Vasc. Pharmacol. 2015, 13, 341–351. [Google Scholar] [CrossRef]
- Mazzeo, A.; Beltramo, E.; Iavello, A.; Carpanetto, A.; Porta, M. Molecular Mechanisms of Extracellular Vesicle-Induced Vessel Destabilization in Diabetic Retinopathy. Acta Diabetol. 2015, 52, 1113–1119. [Google Scholar] [CrossRef] [PubMed]
- Yu, Y.; Zhang, M.; Zhou, W.; Yu, Y.; Jian, L.; Zou, Y.; Pang, L.; Zou, X. MiR-151a-5p Predicts Severity of Diabetic Retinopathy and Protects from Retinal Cell Injury by Inactivating MAPK Signaling via DKK3. Exp. Eye Res. 2025, 251, 110212. [Google Scholar] [CrossRef]
- Mazzeo, A.; Lopatina, T.; Gai, C.; Trento, M.; Porta, M.; Beltramo, E. Functional Analysis of MiR-21-3p, MiR-30b-5p and MiR-150-5p Shuttled by Extracellular Vesicles from Diabetic Subjects Reveals Their Association with Diabetic Retinopathy. Exp. Eye Res. 2019, 184, 56–63. [Google Scholar] [CrossRef]
- Shao, K.; Chen, G.; Xia, L.; Chen, C.; Huang, S. MicroRNA-139-5p Alleviates High Glucose-Triggered Human Retinal Pigment Epithelial Cell Injury by Targeting LIM-Only Factor 4. Mediat. Inflamm. 2021, 2021, 1629783. [Google Scholar] [CrossRef]
- Qin, B.; Liu, J.; Liu, S.; Li, B.; Ren, J. MiR-20b Targets AKT3 and Modulates Vascular Endothelial Growth Factor-Mediated Changes in Diabetic Retinopathy. Acta Biochim. Biophys. Sin. 2016, 48, 732–740. [Google Scholar] [CrossRef] [PubMed]
- Zhao, J.; Gao, S.; Zhu, Y.; Shen, X. Significant Role of MicroRNA-219-5p in Diabetic Retinopathy and Its Mechanism of Action. Mol. Med. Rep. 2018, 18, 385–390. [Google Scholar] [CrossRef]
- Wang, L.; Liu, W.-X.; Huang, X.-G. MicroRNA-199a-3p Inhibits Angiogenesis by Targeting the VEGF/PI3K/AKT Signalling Pathway in an in Vitro Model of Diabetic Retinopathy. Exp. Mol. Pathol. 2020, 116, 104488. [Google Scholar] [CrossRef]
- Oltra, M.; Vidal-Gil, L.; Maisto, R.; Sancho-Pelluz, J.; Barcia, J.M. Oxidative Stress-induced Angiogenesis Is Mediated by MiR-205-5p. J. Cell Mol. Med. 2020, 24, 1428–1436. [Google Scholar] [CrossRef]
- Fu, C.; Peng, J.; Ling, Y.; Zhao, H.; Zhao, Y.; Zhang, X.; Ai, M.; Peng, Q.; Qin, Y. Apigenin Inhibits Angiogenesis in Retinal Microvascular Endothelial Cells through Regulating of the MiR-140-5p/HDAC3-Mediated PTEN/PI3K/AKT Pathway. BMC Ophthalmol. 2023, 23, 302. [Google Scholar] [CrossRef] [PubMed]
- Li, C.; Lie, H.; Sun, W. Inhibitory Effect of MiR-182-5p on Retinal Neovascularization by Targeting Angiogenin and BDNF. Mol. Med. Rep. 2021, 25, 61. [Google Scholar] [CrossRef] [PubMed]
- Ybarra, M.; Martínez-Santos, M.; Oltra, M.; Muriach, M.; Pires, M.E.; Ceresoni, C.; Sancho-Pelluz, J.; Barcia, J.M. MiR-205-5p Modulates High Glucose-Induced VEGFA Levels in Diabetic Mice and ARPE-19 Cells. Antioxidants 2025, 14, 218. [Google Scholar] [CrossRef]
- Jiang, Y.; Sang, Y.; Qiu, Q. MicroRNA-383 Mediates High Glucose-Induced Oxidative Stress and Apoptosis in Retinal Pigment Epithelial Cells by Repressing Peroxiredoxin 3. Am. J. Transl. Res. 2017, 9, 2374–2383. [Google Scholar]
- Zeng, Q.; Liu, J. Silencing Circ_0001879 Inhibits the Proliferation and Migration of Human Retinal Microvascular Endothelial Cells under High-Glucose Conditions via Modulating MiR-30-3p. Gene 2020, 760, 144992. [Google Scholar] [CrossRef]
- Silva, V.A.O.; Polesskaya, A.; Sousa, T.A.; Corrêa, V.M.A.; André, N.D.; Reis, R.I.; Kettelhut, I.C.; Harel-Bellan, A.; De Lucca, F.L. Expression and Cellular Localization of MicroRNA-29b and RAX, an Activator of the RNA-Dependent Protein Kinase (PKR), in the Retina of Streptozotocin-Induced Diabetic Rats. Mol. Vis. 2011, 17, 2228–2240. [Google Scholar]
- McArthur, K.; Feng, B.; Wu, Y.; Chen, S.; Chakrabarti, S. MicroRNA-200b Regulates Vascular Endothelial Growth Factor–Mediated Alterations in Diabetic Retinopathy. Diabetes 2011, 60, 1314–1323. [Google Scholar] [CrossRef]
- Kovacs, B.; Lumayag, S.; Cowan, C.; Xu, S. MicroRNAs in Early Diabetic Retinopathy in Streptozotocin-Induced Diabetic Rats. Investig. Ophthalmol. Vis. Sci. 2011, 52, 4402. [Google Scholar] [CrossRef]
- Ye, Z.; Li, Z.-H.; He, S.-Z. MiRNA-1273g-3p Involvement in Development of Diabetic Retinopathy by Modulating the Autophagy-Lysosome Pathway. Med. Sci. Monit. 2017, 23, 5744–5751. [Google Scholar] [CrossRef][Green Version]
- Wang, H.; Dong, X.; Zhou, J.; Sun, C. Overexpression of MicroRNA-130a-3p Suppresses Glucose Lipid Levels and Oxidative Damage in Diabetic Retinopathy Mice via Modulating Cell Division Cycle 42. J. Genet. 2023, 102, 41. [Google Scholar] [CrossRef]
- Wang, J.-J.; Wu, K.-F.; Wang, D.-D. A Novel Regulatory Network of Linc00174/MiR-150-5p/VEGFA Modulates Pathological Angiogenesis in Diabetic Retinopathy. Can. J. Physiol. Pharmacol. 2021, 99, 1175–1183. [Google Scholar] [CrossRef]
- Ren, Z.; Wang, X. Long Non-coding Ribonucleic Acid ATP2B1-AS1 Modulates Endothelial Permeability through Regulating the MiR-4729–IQGAP2 Axis in Diabetic Retinopathy. J. Diabetes Investig. 2022, 13, 443–452. [Google Scholar] [CrossRef] [PubMed]
- Cao, X.; Xue, L.-D.; Di, Y.; Li, T.; Tian, Y.-J.; Song, Y. MSC-Derived Exosomal LncRNA SNHG7 Suppresses Endothelial-Mesenchymal Transition and Tube Formation in Diabetic Retinopathy via MiR-34a-5p/XBP1 Axis. Life Sci. 2021, 272, 119232. [Google Scholar] [CrossRef] [PubMed]
- Luo, R.; Xiao, F.; Wang, P.; Hu, Y.-X. LncRNA H19 Sponging MiR-93 to Regulate Inflammation in Retinal Epithelial Cells under Hyperglycemia via XBP1s. Inflamm. Res. 2020, 69, 255–265. [Google Scholar] [CrossRef] [PubMed]
- Agarwal, A.; Ingham, S.A.; Harkins, K.A.; Do, D.V.; Nguyen, Q.D. The Role of Pharmacogenetics and Advances in Gene Therapy in the Treatment of Diabetic Retinopathy. Pharmacogenomics 2016, 17, 309–320. [Google Scholar] [CrossRef]
- Kaur, N.; Singh, I.R.; Vanita, V. Association of Erythropoietin Gene Polymorphisms with Type 2 Diabetic Retinopathy in Adult Patients from Northern India. Can. J. Diabetes 2021, 45, 785–791. [Google Scholar] [CrossRef]
- Wong, T.Y.; Sabanayagam, C. The War on Diabetic Retinopathy: Where Are We Now? Asia-Pac. J. Ophthalmol. 2019, 8, 448–456. [Google Scholar] [CrossRef]
- Li, L.; Zhang, W.; Tu, X.; Pang, J.; Lai, I.F.; Jin, C.; Cheung, C.Y.; Lin, H. Application of Artificial Intelligence in Precision Medicine for Diabetic Macular Edema. Asia-Pac. J. Ophthalmol. 2023, 12, 486–494. [Google Scholar] [CrossRef]
- Gardner, T.W.; Sundstrom, J.M. A Proposal for Early and Personalized Treatment of Diabetic Retinopathy Based on Clinical Pathophysiology and Molecular Phenotyping. Vis. Res. 2017, 139, 153–160. [Google Scholar] [CrossRef]
- Rizvi, A.A.; Abbas, M.; Verma, S.; Verma, S.; Khan, A.; Raza, S.T.; Mahdi, F. Determinants in Tailoring Antidiabetic Therapies: A Personalized Approach. Glob. Med. Genet. 2022, 09, 063–071. [Google Scholar] [CrossRef]
- Antonetti, D.A.; Silva, P.S.; Stitt, A.W. Publisher Correction: Current Understanding of the Molecular and Cellular Pathology of Diabetic Retinopathy. Nat. Rev. Endocrinol. 2025, 21, 62. [Google Scholar] [CrossRef]
- Ramos, H.; Hernández, C.; Simó, R.; Simó-Servat, O. Inflammation: The Link between Neural and Vascular Impairment in the Diabetic Retina and Therapeutic Implications. Int. J. Mol. Sci. 2023, 24, 8796. [Google Scholar] [CrossRef]
- Simó, R.; Hernández, C. New Insights into Treating Early and Advanced Stage Diabetic Retinopathy. Int. J. Mol. Sci. 2022, 23, 8513. [Google Scholar] [CrossRef]
- Afarid, M.; Namvar, E.; Sanie-Jahromi, F. Diabetic Retinopathy and BDNF: A Review on Its Molecular Basis and Clinical Applications. J. Ophthalmol. 2020, 2020, 1602739. [Google Scholar] [CrossRef] [PubMed]
- Kong, M.; Song, S.J. Artificial Intelligence Applications in Diabetic Retinopathy: What We Have Now and What to Expect in the Future. Endocrinol. Metab. 2024, 39, 416–424. [Google Scholar] [CrossRef] [PubMed]
- Lu, J.; Huang, Y.; Zhang, X.; Xu, Y.; Nie, S. Noncoding RNAs Involved in DNA Methylation and Histone Methylation, and Acetylation in Diabetic Vascular Complications. Pharmacol. Res. 2021, 170, 105520. [Google Scholar] [CrossRef]
- Midena, E.; Frizziero, L.; Midena, G.; Pilotto, E. Intraocular Fluid Biomarkers (Liquid Biopsy) in Human Diabetic Retinopathy. Graefe’s Arch. Clin. Exp. Ophthalmol. 2021, 259, 3549–3560. [Google Scholar] [CrossRef] [PubMed]
- Díaz-Villamarín, X.; Blánquez-Martínez, D.; Pozo-Agundo, A.; Pérez-Gutiérrez, A.M.; Muñoz-Ávila, J.I.; Antúnez-Rodríguez, A.; Fernández-Gómez, A.E.; García-Navas, P.; Martínez-González, L.J.; Dávila-Fajardo, C.L. Genetic Variants Affecting Anti-VEGF Drug Response in Polypoidal Choroidal Vasculopathy Patients: A Systematic Review and Meta-Analysis. Genes 2020, 11, 1335. [Google Scholar] [CrossRef] [PubMed]
- Blánquez-Martínez, D.; Díaz-Villamarín, X.; García-Rodríguez, S.; Antúnez-Rodríguez, A.; Pozo-Agundo, A.; Martínez-González, L.J.; Muñoz-Ávila, J.I.; Dávila-Fajardo, C.L. Genetic Polymorphisms in VEGFR Coding Genes (FLT1/KDR) on Ranibizumab Response in High Myopia and Choroidal Neovascularization Patients. Pharmaceutics 2022, 14, 1555. [Google Scholar] [CrossRef] [PubMed]
- Bobadilla, M.; Pariente, A.; Oca, A.I.; Peláez, R.; Pérez-Sala, Á.; Larráyoz, I.M. Biomarkers as Predictive Factors of Anti-VEGF Response. Biomedicines 2022, 10, 1003. [Google Scholar] [CrossRef]
- Burnight, E.R.; Gupta, M.; Wiley, L.A.; Anfinson, K.R.; Tran, A.; Triboulet, R.; Hoffmann, J.M.; Klaahsen, D.L.; Andorf, J.L.; Jiao, C.; et al. Using CRISPR-Cas9 to Generate Gene-Corrected Autologous iPSCs for the Treatment of Inherited Retinal Degeneration. Mol. Ther. J. Am. Soc. Gene Ther. 2017, 25, 1999–2013. [Google Scholar] [CrossRef]
- Mrowicka, M.; Mrowicki, J.; Majsterek, I. Relationship between Biochemical Pathways and Non-Coding RNAs Involved in the Progression of Diabetic Retinopathy. J. Clin. Med. 2024, 13, 292. [Google Scholar] [CrossRef]



| Pathogenic Mechanism | Key Molecular Players | Pathophysiological Impact | Clinical Relevance |
|---|---|---|---|
| Metabolic Dysregulation | Polyol pathway (aldose reductase), AGEs, hexosamine pathway | Mitochondrial dysfunction, apoptosis | Contributes to progressive DR severity |
| Hyperglycaemia-Induced Oxidative Stress | ROS, NADPH oxidase, mitochondrial dysfunction | Endothelial dysfunction, increased permeability | Early vascular damage and microaneurysm formation |
| Chronic Inflammation | TNF-α, IL-1β, IL-6, IL-8, IL-10, IL-17, NF-κB | Induction of inflammatory cascades, leukostasis, endothelial injury | Progression to DME and neovascularisation |
| Angiogenesis and Vascular Dysfunction | VEGF-A, angiopoietins, HIF-1α | Increased vascular permeability and neovascularisation | Target for anti-VEGF therapies |
| Neurodegeneration | BDNF, NMDA receptors, retinal ganglion cells | Retinal neuronal apoptosis and loss of neuroprotection | Associated with early DR progression and visual decline |
| Epigenetic Modifications | DNA methylation, histone modifications, non-coding RNAs | Gene expression dysregulation | Potential biomarker and therapeutic target |
| Biomarker Type | Specific Biomarkers | Biological Role | Clinical Application |
|---|---|---|---|
| Inflammatory Biomarkers | CRP, TNF-α, IL-1β, IL-6, IL-8, IL-10, IL-17 | Mediate inflammation and endothelial dysfunction | Predictive marker for DR severity and progression |
| Angiogenic Factors | VEGF-A, PlGF, Angiopoietins | Promote neovascularisation and vascular leakage | Target for anti-VEGF therapy |
| Oxidative Stress Biomarkers | MDA, SOD, GPx | Indicate oxidative damage and metabolic stress | Monitor oxidative damage progression |
| Endothelial Dysfunction Biomarkers | Soluble ICAM-1, VCAM-1, E-selectin | Reflect vascular inflammation, leukocyte adhesion and permeability changes | Early indicators of microvascular dysfunction |
| Retinal Neurodegeneration Biomarkers | BDNF, GFAP | Associated with retinal ganglion cell loss and glial reactivity | Potential target for neuroprotective therapies |
| Metabolomic Biomarkers | 1,5-anhydroglucitol, lactate, glutamate | Indicate metabolic dysregulation and mitochondrial stress | Emerging marker for early DR detection |
| Gene(s)/Loci | Function/Association with DR | Reference |
|---|---|---|
| SUCNR1 (GPR91) | Activated under hypoxic conditions; promotes angiogenesis | [73] |
| GLUT1 (SLC2A1) | Involved in glucose transport and retinal metabolic regulation | [8] |
| ZWINT-MRPS35P3, TCF7L2 (SNPs) | Associated with altered glucose metabolism and retinal cell function | [18] |
| EYA2, MPDZ, NTNG1, CTAGE14P, MREGP1 | Identified in GWAS analyses; potential roles in retinal maintenance | [30] |
| TBC1D4-COMMD6-UCHL3, LRP2-BBS5, ARL4C-SH3BP4 | Identified in Chinese populations with PDR; involved in insulin signalling, apoptosis, and inflammation | [24,44] |
| CCDC7, ITGB1 | Variants associated with vascular integrity and development in type 1 diabetes | [7,77] |
| STT3B, PALM2, EHD3 | Additional loci implicated in DR via GWAS analyses | [12] |
| Component | Description | Application in DR |
|---|---|---|
| Genetic Biomarkers | Identification of genetic variants influencing DR susceptibility and progression | GWAS, whole-exome sequencing, polygenic risk scores for individualised risk assessment |
| Pharmacogenomics | Analysis of genetic variations affecting drug metabolism and therapeutic response | Personalised anti-VEGF, corticosteroid, and anti-inflammatory therapy selection |
| AI-Based Risk Stratification | Machine learning and deep learning models combining genetic, imaging, and clinical data | Development of predictive models for DR onset, progression, and treatment response |
| Multi-Omics Integration | Integration of genomic, proteomic, metabolomic, and epigenomic data | Refining disease classification, discovering novel biomarkers, and optimising therapy |
| Targeted Gene Therapies | Gene-editing technologies such as CRISPR-Cas9 for modifying disease-associated pathways | Potential future applications in DR prevention and treatment |
| Personalised Screening Strategies | Adjusting screening frequency and methods based on individual risk factors | AI-driven risk models for high-risk population identification and monitoring |
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Kaštelan, S.; Nikuševa-Martić, T.; Pašalić, D.; Matejić, T.; Gverović Antunica, A. Precision Medicine in Diabetic Retinopathy: The Role of Genetic and Epigenetic Biomarkers. J. Clin. Med. 2025, 14, 8778. https://doi.org/10.3390/jcm14248778
Kaštelan S, Nikuševa-Martić T, Pašalić D, Matejić T, Gverović Antunica A. Precision Medicine in Diabetic Retinopathy: The Role of Genetic and Epigenetic Biomarkers. Journal of Clinical Medicine. 2025; 14(24):8778. https://doi.org/10.3390/jcm14248778
Chicago/Turabian StyleKaštelan, Snježana, Tamara Nikuševa-Martić, Daria Pašalić, Tomislav Matejić, and Antonela Gverović Antunica. 2025. "Precision Medicine in Diabetic Retinopathy: The Role of Genetic and Epigenetic Biomarkers" Journal of Clinical Medicine 14, no. 24: 8778. https://doi.org/10.3390/jcm14248778
APA StyleKaštelan, S., Nikuševa-Martić, T., Pašalić, D., Matejić, T., & Gverović Antunica, A. (2025). Precision Medicine in Diabetic Retinopathy: The Role of Genetic and Epigenetic Biomarkers. Journal of Clinical Medicine, 14(24), 8778. https://doi.org/10.3390/jcm14248778

