Study on the Soil Microbial Diversity of Cymbidium goeringii and Cymbidium faberi in the Qinling Mountains after Introduction and Domestication
Abstract
:1. Introduction
2. Materials and Methods
2.1. Overview of the Experimental Site
2.2. Methods
2.2.1. Soil Sampling Collection
2.2.2. Extraction of Soil Microbial DNA
2.2.3. High-Throughput Sequencing
2.2.4. Data Processing and Analysis
3. Results
3.1. Sequencing Results and Quality Analysis
3.1.1. Bacteria
3.1.2. Fungi
3.2. Diversity Analysis of Bacteria in Rhizosphere
3.2.1. Analysis of Alpha Diversity in Bacteria
3.2.2. Analysis of Bacterial Taxonomic Composition
3.3. Diversity Analysis of Fungi in Rhizosphere Soil
3.3.1. Analysis of Alpha Diversity in Fungi
3.3.2. Analysis of Fungi Taxonomic Composition
3.4. Analysis of Differences in Bacterial and Fungal Communities
4. Discussion
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Samples | Shannon | Simpson | Ace | Chao |
---|---|---|---|---|
CL | 6.08 ± 0.06 a | 0.01 ± 0.00 a | 2025.78 ± 112.38 a | 2052.12 ± 74.68 a |
HL | 6.22 ± 0.09 a | 0.01 ± 0.00 a | 2021.15 ± 55.70 a | 2013.07 ± 94.42 a |
KB | 6.11 ± 0.22 a | 0.01 ± 0.01 a | 2081.12 ± 28.69 a | 2057.28 ± 29.12 a |
Samples | Shannon | Simpson | Ace | Chao |
---|---|---|---|---|
CL | 3.71 ± 0.32 a | 0.06 ± 0.01 a | 686.73 ± 57.62 a | 672.74 ± 51.85 a |
HL | 4.02 ± 0.24 a | 0.04 ± 0.02 a | 727.68 ± 2.47 a | 721.81 ± 3.36 a |
KB | 3.24 ± 0.60 a | 0.15 ± 0.10 a | 681.04 ± 61.81 a | 671.82 ± 60.32 a |
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Lv, R.; Zhang, J.; Liao, H.; Yong, J.W.H.; Song, J. Study on the Soil Microbial Diversity of Cymbidium goeringii and Cymbidium faberi in the Qinling Mountains after Introduction and Domestication. Diversity 2023, 15, 951. https://doi.org/10.3390/d15090951
Lv R, Zhang J, Liao H, Yong JWH, Song J. Study on the Soil Microbial Diversity of Cymbidium goeringii and Cymbidium faberi in the Qinling Mountains after Introduction and Domestication. Diversity. 2023; 15(9):951. https://doi.org/10.3390/d15090951
Chicago/Turabian StyleLv, Ruixue, Jing Zhang, Huimin Liao, Jean W. H. Yong, and Junyang Song. 2023. "Study on the Soil Microbial Diversity of Cymbidium goeringii and Cymbidium faberi in the Qinling Mountains after Introduction and Domestication" Diversity 15, no. 9: 951. https://doi.org/10.3390/d15090951