Search Results (16)

The genus Vigna Savi (Leguminosae Juss.) comprises approximately 150 species, classified into five subgenera, most of which exhibit a diploid chromosome number of 2n = 22. However, the wild species Vigna lasiocarpa (Benth) Verdc. (V. subg. Lasiospron) is notable for its dysploid chromosome number of 2n = 20. This study aimed to elucidate the chromosomal events involved in the karyotype evolution of V. lasiocarpa (Vla). We used oligopainting probes from chromosomes 1, 2, 3, and 5 of Phaseolus vulgaris L. and two barcode probes from the genome of V. unguiculata (L.) Walp. Additionally, bacterial artificial chromosomes (BACs) from V. unguiculata and P. vulgaris, along with a telomeric probe from Arabidopsis thaliana (L.) Heynh., were hybridized to V. lasiocarpa metaphase chromosomes to characterize Vla3, Vla7/5, and Vla9. Our findings revealed conserved oligo-FISH patterns on chromosomes 2, 6, 8, 10, and 11 between V. unguiculata and V. lasiocarpa. Paracentric and pericentric inversions were identified for Vla3 and Vla9, respectively. Our integrative approach revealed that the dysploid chromosome originated from an “end-to-end fusion” of homoeologous chromosomes 5 and 7. This is the first report on the chromosomal mechanisms underlying descending dysploidy in Vigna, providing new insights into the evolutionary dynamics of the genus. Full article

Seawater intrusion into soils caused by global climate change and tsunami disasters is a significant factor contributing to soil salinization in coastal vegetation areas, posing a critical threat to agriculture and food security. This study aimed to evaluate the seawater tolerance of Vigna marina, a wild Vigna species, through comparative laboratory experiments with Vigna radiata (mung bean) and Vigna angularis (adzuki bean). Unlike V. radiata and V. angularis, the seeds of V. marina exhibited significant buoyancy in seawater, remaining afloat for at least 30 days. After this prolonged seawater incubation, V. marina seeds maintained a 100% germination rate, whereas V. radiata and V. angularis failed to germinate under the same conditions. The photosynthetic activity of V. marina seedlings, evaluated via the Fv/Fm parameter, remained stable even after seven days of seawater irrigation. In contrast, V. radiata and V. angularis perished under seawater irrigation. Furthermore, V. marina seedlings exhibited sustained growth under seawater irrigation, showing consistent increases in both fresh and dry weight. These findings confirm that V. marina possesses remarkable tolerance to seawater, a critical characteristic for cultivation in areas affected by seawater intrusion. Full article

Blackgram is an important short-duration grain legume, but its yield is highly affected by various stresses. Among biotic stresses, yellow mosaic disease (YMD) is known as a devastating disease that leads to 100% yield loss under severe conditions. The cultivated lines possess resistance, but exploring more diverse sources of resistance may be useful for pyramiding to improve the durability of said resistance. Some wild Vigna species have potentially demonstrated a high level of resistance. R-genes, including gene families of leucine-rich repeats (LRRs) and leucine-rich repeat receptor-like kinases (LRR-RLKs), are known for modulating the resistance in plants against various biotic stresses. The first comprehensive analysis of the LRR and LRR-RLK gene families in mungbean is reported in the present study. A total of forty-six candidate genes were identified and grouped into eight clades. Protein motif analysis showed that the “Pkinase domain” and “LRR domains” were conserved in most of the R-proteins. The expression of candidate genes viz. VrNBS_TNLRR-8, VrLRR_RLK-20, VrLRR_RLK-17, and VrLRR_RLK-19 demonstrated significantly up-regulated expression upon YMD infection in control and salicylic acid-primed (SA-primed) plants. The analysis provides insight into the diversity and robust candidate genes for functional studies modulating YMD resistance altered by salicylic acid. Full article

The genus Vigna is pan-tropical, having more than 200 species with many desirable economically important traits. This study aimed to validate the in silico polymorphism of whole-genome-sequence-developed mungbean-specific SSR markers and their transferability among different Vigna species. The present study utilized a set of 200 SSR markers developed from the whole-genome sequence of mungbean and validated them using a diversity panel of 25 accessions that belong to 13 Vigna species. Out of 200 SSR markers, 130 markers (65%) were polymorphic across the various Vigna species, and the number of alleles amplified varied from 7 to 24. The SSR markers showed more than 90 percent transferability across the different Vigna species accessions. Utilizing allelic data, the 25 Vigna accessions were clustered into three groups using the unweighted pair group method with arithmetic mean (UPGMA). The two integral coalitions explained 50.79 and 15.42% of the total variance. The principal coordinate analysis (PCA) biplot graph and UPGMA-based neighbor-joining clustering diagram showed a similar pattern of Vigna accession distribution. A population structure assessment grouped the cultivated and wild species accessions into two sub-populations based upon a maximum delta K value of 144.79, which drew a sharp peak at K = 2. The estimated marker parameters, such as the polymorphic information content (0.09–0.84), marker index (0.091–3.342), and effective multiplex ratio (1.0–4.0), suggested their adequacy for several genetic studies, such as parental selection, hybrid testing, genetic mapping, and marker-aided breeding programs, for the genetic enhancement of species belonging to the Vigna genus. Full article

Mungbean is known to be susceptible to waterlogging (WL) stress. Some of the wild species have the potential to tolerate this through various physiological and molecular mechanisms. Auxin Response Factor (ARF) and Auxin/Indole Acetic Acid (AUX/IAA), an early responsive gene family, has multiple functions in growth, development, and stress tolerance. Here, we report the first comprehensive analysis of the ARF and AUX/IAA gene family in mungbean. A total of 26 ARF and 19 AUX/IAA genes were identified from the mungbean genome. The ARF and AUX/IAA candidates were clearly grouped into two major clades. Further, the subgrouping within the major clades indicated the presence of significant diversity. The gene structure, motif analysis, and protein characterization provided the clue for further fundamental research. Out of the10 selected candidate genes, VrARF-5, VrARF-11, VrARF-25, and VrAUX/IAA-9 were found to significantly multiple-fold gene expression in the hypocotyl region of WL-tolerant wild relatives (PRR 2008-2) provides new insight into a role in the induction of lateral root formation under WL stress. The analysis provides an insight into the structural diversity of ARF and AUX/IAA genes in mungbean. These results increase our understanding of ARF and AUX/IAA genes and therefore offer robust information for functional investigations, which can be taken up in the future and will form a foundation for improving tolerance against waterlogging stress. Full article

WRKY transcription factors play a pivotal role in regulating stress signaling pathways, including those associated with salt stress response. The present work characterized the effects of two WRKY genes from Vigna unguiculata, namely VuWRKY21 and VuWRKY87, on enhancing plant salinity tolerance. Under salt stress conditions, Arabidopsis lines expressing VuWRKY21 or VuWRKY87 showed elevated expression of genes participating in saline stress response pathways and reduced oxidative stress induced by reactive oxygen species (ROS). Among the salt-responsive genes in Arabidopsis, AtP5CS1, AtNHX1, AtRD29A, AtSOS3, AtSOS2, and AtSOS1 exhibited modulated expression levels after stress imposition. Furthermore, compared to wild-type plants, at most evaluated times, transgenic lines, on average, presented lower H₂O₂ content while displaying higher content of SOD (EC: 1.15.1.1) and CAT (EC: 1.11.1.6) at early stages of salt stress. These findings suggest that the expression of both VuWRKY genes in Arabidopsis, particularly VuWRKY21, activated genes involved in salinity tolerance. Full article

The domesticated Vigna species still need some of the beneficial characters that exist in the wild Vigna species, despite the improvements obtained so far. This study was carried out to enhance our understanding of the Senegalese wild Vigna diversity by exploring the agro-morphological characteristics of some accessions using 22 traits. The phenotyping was carried out in a shaded house for two consecutive rainy seasons (2021 and 2022) using the alpha-lattice experimental design with 55 accessions. Multiple correspondence analysis was carried out based on the qualitative traits, which showed considerable variability for the wild species (Vigna unguiculata var. spontanea, Vigna racemosa, Vigna radiata and the unidentified accession). The quantitative traits were subjected to statistical analysis using descriptive statistics and ANOVA. Our results revealed that ninety-five percent (95%) pod maturity ranged from 74.2 to 125.8 days in accession 3 of V. unguiculata and in accession 92 (V. racemosa), respectively. In addition, accession 14 of V. radiata recorded the highest weight for 100 seeds with a value of 4.8 g, while accession 18 of V. unguiculata had the lowest (1.48 g). The ANOVA showed significant differences for the accessions during each season (p ≤ 0.05). Seasonal effects (accession × season) were observed for some quantitative traits, such as the terminal leaflet length and width, time to 50% flowering and 95% pod maturity, pod length and 100-seed weight. Principal component analysis showed that reproductive traits, such as the time to 50% flowering, number of locules per pod, pod length, pod width and 100-seed weight, were the major traits that accounted for the variations among the wild Vigna accessions. The genetic relationship based on qualitative and quantitative traits showed three clusters among the wild Vigna accessions. Indeed, the diversity observed in this study could be used to select parents for breeding to improve the cultivated species of Vigna. Full article

Pulses are a key source of dietary proteins in human nutrition. Despite several efforts to increase the production, various constraints, such as biotic and abiotic factors, threaten pulse production by various means. Bruchids (Callosobruchus spp.) are the serious issue of concern, particularly in storage conditions. Understanding host–plant resistance at morphological, biochemical and molecular levels is the best way to minimize yield losses. The 117 mungbean (Vigna radiata L. Wilczek) genotypes, including endemic wild relatives, were screened for resistance against Callosobruchus chinensis; among them, two genotypes, PRR 2008-2 and PRR 2008-2-sel, which belong to V. umbellata (Thumb.), were identified as highly resistant. The expression of antioxidants in susceptible and resistant genotypes revealed that the activity of phenylalanine ammonia lyase (PAL) was upregulated in the highly resistant wild Vigna species and lower in the cultivated susceptible genotypes, along with other biomarkers. Further, the SCoT-based genotyping revealed SCoT-30 (200 bp), SCoT-31 (1200 bp) and SCoT-32 (300 bp) as unique amplicons, which might be useful for developing the novel ricebean-based SCAR markers to accelerate the molecular breeding programme. Full article

Wild relatives of crops have the potential to improve food crops, especially in terms of improving abiotic stress tolerance. Two closely related wild species of the traditional East Asian legume crops, Azuki bean (Vigna angularis), V. riukiuensis “Tojinbaka” and V. nakashimae “Ukushima” were shown to have much higher levels of salt tolerance than azuki beans. To identify the genomic regions responsible for salt tolerance in “Tojinbaka” and “Ukushima”, three interspecific hybrids were developed: (A) azuki bean cultivar “Kyoto Dainagon” × “Tojinbaka”, (B) “Kyoto Dainagon” × “Ukushima” and (C) “Ukushima” × “Tojinbaka”. Linkage maps were developed using SSR or restriction-site-associated DNA markers. There were three QTLs for “percentage of wilt leaves” in populations A, B and C, while populations A and B had three QTLs and population C had two QTLs for “days to wilt”. In population C, four QTLs were detected for Na⁺ concentration in the primary leaf. Among the F₂ individuals in population C, 24% showed higher salt tolerance than both wild parents, suggesting that the salt tolerance of azuki beans can be further improved by combining the QTL alleles of the two wild relatives. The marker information would facilitate the transfer of salt tolerance alleles from “Tojinbaka” and “Ukushima” to azuki beans. Full article

The genus Vigna has several crop species that could be used to feasibly address nutritional security challenges in the subtropical and tropical regions of the world, particularly in climate-changing scenarios. Wild taxa of Vigna are a source of economically important traits and need to be studied. Out of the 34 wild Vigna species reported in India, 928 indigenous accessions belonging to 19 wild Vigna are conserved in India’s National Genebank (INGB) housed at the National Bureau of Plant Genetic Resources, New Delhi. Geospatial mapping has identified diversity-rich areas and the Western Ghats region exhibits the highest Shannon diversity values (H = 1.65–3.0). Using the complementarity procedure, six diversity hotspots were identified for the 34 wild Vigna, and these require utmost priority for exploration and germplasm collection. Due to the meagre amount of information available for wild Vigna, the BioClim model was used to successfully predict the Idukki district of Kerala as a suitable site for germplasm-collecting expeditions. Coastal areas identified as rich in twelve wild taxa, V. bourneae, V. dalzelliana, V. marina, V. sublobata, V. subramaniana, V. vexillata, V. stipulacea, V. trilobata, and V. trinervia, require immediate attention to protect hotspots as well as to collect accessions from these areas for ex situ conservation. A hotspot in the protected forest of Anshi National Park and Bhagwan Mahavira Wildlife Sanctuary was identified as an ideal spot for possible in situ conservation of V. konkanensis, V silvestris, and V. sublobata. The 15 wild Vigna species do not have representation in the INGB, and 11 Vigna species have been identified as endemic species to India. Priority needs to be given to these species for focussed exploration and germplasm collection. This paper discusses the future focus on explorations to be carried out for the collection of the germplasm of wild Vigna species. Full article

Mungbean (Vigna radiata L. Wilczek) is an important short-duration grain legume of the genus Vigna that has wider adaptability across agro-climatic regions and soil types. Significant strides have been made towards the development of superior, high-yielding, and climate resilient cultivars in mungbean. A number of donors for various traits to have been deployed in introgression breeding. However, the use of common sources of resistance to different biotic stresses may lead to boom and bust cycles due to the appearance of new races or biotypes. Therefore, broadening the genetic base using wild and exotic plant genetic resources may offer a better quality of durable resistance. Many crop wild relatives (CWRs) confer a high degree of resistance against multiple diseases. Recently, several agronomically important genes have been mapped using inter-specific populations, which are being deployed for the improvement of mungbean. In such a situation, tagging, mapping, and exploiting genes of interest from cross-species donors for stress tolerance will offer novel genetic variations. This will also provide increased opportunities for the selection of desirable types. Advances in genomics and transcriptomics have further made it easy to tag the cross-compatible resistance loci and study their expression for delineating the mechanism of resistance. The comparative analysis of omics technology also helps in understanding the evolution and offers a scope for using cross-specific target genes for mungbean improvement. This review focuses on the effective utilization of cross-species cultivated and wild relatives as well as their omics resources for breeding multiple disease-resistant mungbean cultivars. Full article

Legumes are one of the most economically important and biodiverse families in plants recognised as the basis to develop functional foods. Among these, the Vigna genus stands out as a good representative because of its relatively recent African origin as well as its outstanding potential. Africa is a great biodiversity centre in which a great number of species are spread, but only three of them, Vigna unguiculata, Vigna subterranea and Vigna vexillata, were successfully domesticated. This review aims at analysing and valorising these species by considering the perspective of human activity and what effects it exerts. For each species, we revised the origin history and gave a focus on where, when and how many times domestication occurred. We provided a brief summary of bioactive compounds naturally occurring in these species that are fundamental for human wellbeing. The great number of wild lineages is a key point to improve landraces since the domestication process caused a loss of gene diversity. Their genomes hide a precious gene pool yet mostly unexplored, and genes lost during human activity can be recovered from the wild lineages and reintroduced in cultivated forms through modern technologies. Finally, we describe how all this information is game-changing to the design of future crops by domesticating de novo. Full article

Genotyping by sequencing (GBS) was used to analyze relationships among cowpea and asparagus bean landraces from southern Italy and to assess the utility of this technology to study taxonomy in a wider panel, including V. unguiculata cultigroups, subspecies, and other Vigna species. The analysis of SNPs derived from GBS highlighted that, among the cowpea landraces, the African samples were separated from the other material, while, for the Italian landraces, a certain clustering depending on seed color/pattern was observed in the dendrogram. When examining the V. unguiculata species complex, a clear separation between the two groups of wild subspecies, i.e., the allogamous wild perennials and the perennial out/inbreds, could be observed, the former representing the more ancestral wild progenitors of V. unguiculata. The species V. vexillata appeared more closely related to V. unguiculata than to the other Vigna species analyzed. Full article

The domestication of novel or hitherto wild food crops is quickly becoming one of the most popular approaches in tackling the challenges associated with sustainable food crop production, especially in this era, where producing more food with fewer resources is the need of the hour. The crop breeding community is not yet completely unanimous regarding the importance of crop neo-domestication. However, exploring the unexplored, refining unrefined traits, cultivating the uncultivated, and popularizing the unpopular remain the most adequate steps proposed by most researchers to achieve the domestication of the undomesticated for food and nutrition security. Therefore, in the same line of thought, this paper explores the agro-morphological characteristics of some wild Vigna legumes from an inquisitive perspective to contribute to their domestication. One hundred and sixty accessions of wild Vigna legumes, obtained from gene banks, were planted, following the augmented block design layout of two agro-ecological zones of Tanzania, during the 2018 and 2019 main cropping seasons for agro-morphological investigations. The generalized linear model procedure (GLM PROC), two-way analysis of variance (two-way ANOVA), agglomerative hierarchical clustering (AHC) and principal component analysis (PCA) were used to analyze the accession, block and block vs. accession effects, as well as the accession × site and accession × season interaction grouping variations among accessions. The results showed that the wild species (Vigna racemosa; Vigna ambacensis; Vigna reticulata; and Vigna vexillata) present a considerable variety of qualitative traits that singularly exist in the three studied checks (cowpea, rice bean, and a landrace of Vigna vexillata). Of the 15 examined quantitative traits, only the days to flowering, pods per plant, hundred seed weight and yield were affected by the growing environment (accession × site effect), while only the number of flowers per raceme and the pods per plant were affected by the cropping season (accession × season effect). All the quantitative traits showed significant differences among accessions for each site and each season. The same result was observed among the checks, except for the seed size trait. The study finally revealed three groups, in a cluster analysis and 59.61% of the best variations among the traits and accessions in PCA. Indications as to the candidate accessions favorable for domestication were also revealed. Such key preliminary information could be of the utmost importance for the domestication, breeding, and improvement of these species, since it also determines their future existence—that is, so long as biodiversity conservation continues to be a challenging concern for humanity. Full article

Some phenotypic traits from wild legumes are relatively less examined and exploited towards their domestication and improvement. Cooking time for instance, is one of the most central factors that direct a consumer’s choice for a food legume. However, such characters, together with seed water absorption capacity are less examined by scientists, especially in wild legumes. Therefore, this study explores the cooking time and the water absorption capacity upon soaking on 84 accessions of wild Vigna legumes and establishes a relationship between their cooking time and water absorbed during soaking for the very first time. The accessions were grown in two agro-ecological zones and used in this study. The Mattson cooker apparatus was used to determine the cooking time of each accession and 24 h soaking was performed to evaluate water absorbed by each accession. The two-way analysis of variance revealed that there is no interaction between the water absorption capacity and cooking time of the wild Vigna accessions with their locations or growing environments. The study revealed that there is no environment × genotype interaction with respect to cooking time and water absorption capacity as phenotypic traits while genotype interactions were noted for both traits within location studied. Furthermore, 11 wild genotypes of Vigna accessions showed no interaction between the cooking time and the water absorption capacity when tested. However, a strong negative correlation was observed in some of the wild Vigna species which present phenotypic similarities and clusters with domesticated varieties. The study could also help to speculate on some candidates for domestication among the wild Vigna species. Such key preliminary information could be of vital consideration in breeding, improvement, and domestication of wild Vigna legumes to make them useful for human benefit as far as cooking time is concerned. Full article