Search Results (396)

The Amur tiger (Panthera tigris altaica) is a flagship and umbrella species of forest ecosystems in northeastern Asia. Climate change is profoundly and irreversibly affecting wildlife habitat suitability, especially for large mammals. To effectively protect the Amur tiger, it is necessary to understand the impact of climate change on the quality and the connectivity of its habitat. We used the species distribution models combined with the latest Shared Socioeconomic Pathway (SSP) climate scenarios to predict current and future changes in habitats and corridors. We found the following: (1) The total area of the Amur tiger’s suitable habitat currently amounts to approximately 4941.94 km², accounting for 27.64% of the study area represented by two adjacent national parks. Among these habitats, the highly suitable areas are mainly located on the both sides of the Sino-Russian border. The landscape connectivity remains relatively stable, and the degree of fragmentation in highly suitable habitats is low. (2) Although the suitable habitat of the Amur tiger shows an expansion trend under most climate scenarios (excluding SSP3-7.0), the area of suitable habitat within the entire study region does not increase significantly. Therefore, we should implement conservation measures to facilitate the continued expansion of suitable habitat for the Amur tiger. The quantity and length of landscape connectivity corridors are expected to vary in response to changes in core habitat patches, while the centroid of highly suitable habitats is also expected to shift to different extents. In such circumstances, new ecological corridors need to be constructed, while existing natural ecological corridors should be preserved. Full article

Polyphagous fruit fly (Diptera: Tephritidae) pests from the Pacific Islands pose a biosecurity risk to New Zealand, a country free from pest fruit flies. Among them, Bactrocera facialis, B. passiflorae, B. kirki, and B. distincta are sympatric species commonly intercepted at immature stages at the border. However, current mitochondrial cytochrome oxidase I (COI) barcode data lack sufficient variation for a confident identification of the above four species. To address this, we generated COI barcode data for 403 fruit fly individuals including these four species and an additional 17 related fruit fly species. A phylogenetic analysis of the COI sequences of B. facialis revealed two genetically distinct populations, one closely related to B. passiflorae. Complete mitochondrial genomes were explored, identifying minor fixed differences in Cytochrome b (CYTB), NADH dehydrogenase 2 (ND2), and ATP synthase membrane subunit 6 (ATP6) genes. Based on sequence data for COI, ND2, and ATP6 genes, a multiplex real-time PCR assay has been developed and validated for the four target species. Each assay demonstrated high specificity, with no cross-reactions, and sensitivity as low as 10 copies/μL of the target DNA. This study shows that the developed assays enable the rapid and reliable identification of the target fruit fly species, supporting global biosecurity efforts. Full article

The highly pathogenic avian influenza H5N1 2.3.4.4b clade virus has caused widespread outbreaks across South America, primarily affecting seabirds, poultry, and marine mammals. The virus likely reached the continent through migratory birds from North America, initially spreading along the Pacific coast before advancing into Atlantic-bordering countries such as Argentina, Uruguay, and Brazil. This study investigated the dynamics of H5N1 strains in Uruguay during outbreaks from February and October 2023. We analyzed an updated South American database, including a newly sequenced viral genome from a royal tern (Thalasseus maximus) collected at the end of the outbreaks. Phylogeographic reconstruction revealed two distinct South American phylogroups comprising Uruguayan strains: one mainly driven by wild birds and poultry, with the royal tern strain clustering with Brazilian isolates, and another primarily associated with marine mammals, displaying adaptive residues in the PB2 protein. In Uruguay, these phylogroups delineate two main transmission routes: (i) an avian-derived pathway originating in Argentina and (ii) a pinniped-derived route from Chile. Brazil, initially colonized via the Argentine route, later emerged as a secondary source for Uruguay. This host-pathway interplay underscores the virus’s cross-species potential and highlights the need for coordinated regional surveillance within a One Health framework to mitigate zoonotic risks. Full article

Fruit flies that belong to the genus Zeugodacus (Diptera: Tephritidae) pose significant threats as invasive pests of agricultural crops in Asia and sub-Saharan Africa. The intensification of transboundary trade in fresh horticultural produce has increased the risk of introducing invasive species such as fruit flies, more so through the inadvertent transport of their immature developmental stages. Such immature stages of fruit flies belonging to the Tephritidae family are frequently intercepted at the international borders worldwide and are unable to be identified to the species level using morphological characteristics. Molecular identification using mitochondrial Cytochrome Oxidase I (COI) gene has proven to be quite useful, as they are not constrained by developmental stages, sex, or colour morphs of the pest species in question. Also, real-time PCR-based species-specific assays offer quicker turnaround time since they do not require any post-PCR procedures. This study evaluated the utility of a real-time PCR assay based on the COI gene region to identify Zeugodacus cucurbitae from other Tephritid species. The developed real-time PCR assay provides a swift and precise way of discriminating between these highly invasive pest species during an interception event for rapid decision making. High specificity, having no cross-reactions with closely related Tephritids, and sensitivity of the developed assay will be extremely useful in discriminating Z. cucurbitae from other closely related fruit fly species. Z. cucurbitae-specific real-time PCR developed in this study is appropriate for organizations that carry out routine diagnostics to facilitate fresh produce imports and exports. Our assay is fully optimized for rapid deployment at international borders, offering reliable detection of the target species regardless of developmental stage, sex, or geographic origins. Full article

Culicoides (Diptera, Ceratopogonidae) are small biting midges and are known as vectors for many arboviruses, including bluetongue virus (BTV) and epizootic hemorrhagic disease virus (EHDV). Tengchong County of Yunnan Province, China, which borders Myanmar, has many private farms with goats, sheep, and cattle. To estimate the risk of Culicoides-borne viral diseases such as bluetongue (BT) and epizootic hemorrhagic disease (EHD) in this area, an investigation of the diversity and abundance of Culicoides in Tengchong between May 2024 and April 2025 was performed. As a result, 70 collections totaling approximately 93,000 Culicoides were carried out at five farms (cattle + Asian buffaloes, goats, and sheep, respectively). Nineteen species were identified, and eight potential cryptic species were found. A total of 13 cox1 sequences and 4 28S sequences for 13 specimens were generated. The most dominant species were Obsoletus (44.1%), C. homotomus (23.3%), and C. arakawae (12.9%) at the bovine farm; C. tainanus (68.0%), C. orientalis (12.6%), and C. newsteadi (Asia) (6.3%) at the goat farm; and C. tainanus (73.6%), C. fenggangensis (7.3%), and C. sp. nr palpifer (6.3%) at the sheep farm. In this investigation, C. tainanus, Obsoletus, and C. orientalis were the most dominant potential BTV vectors, and the period between July and October may be the main period for epidemics of Culicoides-borne viruses in Tengchong. Full article

Bombus haematurus (Hymenoptera: Apidae), which arrived from the Balkan Peninsula, was first reported in Italy in 2020 in the Friuli Venezia Giulia region (FVG) (northeastern Italy) near the border with Slovenia. To study the spread and biology of the species, a survey was conducted at several sites of the FVG in the period 2023–2025. Bombus haematurus was recorded at 22 new sites across all four districts of the FVG (Trieste, Gorizia, Udine, and Pordenone), indicating its expansion towards the west. Bumblebees of this species were detected in plain and hilly areas at sites between 10 and 364 m a.s.l. They were observed more frequently at forest edges, undergrowth paths or clearings and meadows adjacent to woods, confirming the species is hylophilous. The activity of adults from February to July confirms that the bumblebee is an univoltine spring species. Specimens were observed foraging on the flowers of 19 wild and ornamental plants belonging to 12 families (in particular, Lamiaceae), confirming that the species is polylectic. The data collected indicate that B. haematurus are permanently established in the FVG and that a further spread of the species towards the west in the neighbouring Veneto region is likely. Full article

Stevia rebaudiana Bertoni, a semi-perennial herb from the Asteraceae family, is native to the Paraguay–Brazil border region. The growing industrial interest in this species is due to its natural sweetening properties, such as steviol and its derivatives, which offer sweetness without adding calories. Morphological traits are crucial for assessing genetic variability and ensuring distinctness, homogeneity, and stability (DHS) for cultivar protection. This study characterized 19 elite Stevia genotypes from Embrapa Cerrados’ Active Germplasm Bank (BAG) using 21 morphological descriptors from Brazil’s Ministry of Agriculture, Livestock, and Supply (MAPA). Genetic distances were calculated using the simple coincidence index complement method, and clustering was performed via the Unweighted Pair-Group Method with Arithmetic Mean (UPGMA). The results showed that 17 of the 21 descriptors (>80%) effectively differentiated the genotypes, revealing significant genetic variability. Dendrogram analysis identified at least four major similarity groups, highlighting the potential of these genotypes for Stevia breeding programs. These findings underscore the suitability of these elite genotypes for developing superior varieties adapted to Cerrado conditions, supporting future cultivation and genetic improvement efforts. Full article

Zoonotic opportunistic enteric protozoa represent a significant global health threat to immunocompromised populations, especially individuals with human immunodeficiency virus (HIV). Despite China’s severe HIV burden, molecular epidemiological data on enteric protozoa remain limited in this population. In this study, we investigated the occurrence and molecular characteristics of Cryptosporidium species, Giardia duodenalis, and Enterocytozoon bieneusi among 150 AIDS patients with severe immunodeficiency in Wuhan city, Hubei Province, China. The overall test-positive rate was 5.33% (8/150), comprising Cryptosporidium species (including C. hominis, C. parvum, and C. meleagridis) in 2.00% (3/150) and G. duodenalis (including assemblage A, B, and E) in 3.33% (5/150); E. bieneusi was not detected. Notably, this study reports the first identification of the C. parvum subtype IIcA5G3 in humans in China, certainly indicating possible cross-border transmission. Furthermore, the detection of C. meleagridis IIIbA22G1R1c provided additional molecular evidence for chicken-to-human transmission. The finding of G. duodenalis assemblage E highlights the underrecognized zoonotic spillover risks to immunocompromised populations. These findings emphasize the diversity of infectious reservoirs, and the need for enhanced national molecular surveillance of these neglected zoonotic enteric protozoa, alongside targeted interventions for vulnerable populations. Full article

In the forest ecosystems of Central European Russia, the influence of forest edges on the spatial distribution of Drosophilidae was studied for the first time. The research was conducted during the period of 2021–2022 in the Republic of Mordovia. Beer traps baited with fermented beer and sugar were used to collect Drosophilidae. Two study plots were selected, differing in their forest edges, tree stands, and adjacent open ecosystems. In both cases, the forest directly bordered an open ecosystem. Edges serve as transitional biotopes, where both forest and meadow (open area) faunas coexist. Knowing that many drosophilid species prefer forest habitats, we designated forest interior sites as control points. Traps were set at heights of 1.5 m (lower) and 7.5 m (upper) on trees. A total of 936 specimens representing 27 species were collected. Nine species were common across all traps, while ten species were recorded only once. At the forest edges, 23 species were captured across both heights, compared to 19 species in the forest interiors. However, the total abundance at the forest edges was 370 specimens, while it was 1.5 times higher in the forest interiors. Both abundance and species richness varied between plots. Margalef’s index was higher at the forest edges than in the forest interiors, particularly at 1.5 m height at the edge and at 7.5 m height in the forest interior. Shannon and Simpson indices showed minimal variation across traps at different horizontal and vertical positions. The highest species diversity was observed among xylosaprobionts (9 species) and mycetophages (8 species). All ecological groups were represented at the forest edges, whereas only four groups were recorded in the forest interiors, with the phytosaprophagous species Scaptomyza pallida being absent. In general, both species richness and drosophilid abundance increased in the lower strata, both at the forest edge and within the interior. Using the R package Indicspecies, we identified Gitona distigma as an indicator species for the forest edge and Scaptodrosophila rufifrons as an indicator for the forest interior in the lower tier for both plots. In addition, Drosophila testacea, D. phalerata, and Phortica semivirgo were found to be indicator species for the lower tier in both plots, while Leucophenga quinquemaculata was identified as an indicator species for the upper tier at the second plot. Full article

The genus Lysionotus belongs to the family Gesneriaceae and includes plants with both ornamental and medicinal value. However, genomic-level data on the genus remains scarce. Previous investigations of Lysionotus have predominantly centered on morphological classification, with only limited exploration of molecular phylogenetics. Comparative analysis of chloroplast genomes within the genus would provide valuable insights into the genetic variations and evolutionary patterns of Lysionotus plants. In this study, we present the analysis of 24 newly sequenced chloroplast genomes from Lysionotus-related members, including widely distributed and locally distributed species. The results showed that the 11 plastome sizes of widely distributed species ranged from 152,928 to 153,987 bp, with GC content of 37.43–37.49%; the 13 plastome sizes of locally distributed species ranged from 153,436 to 153,916 bp, with GC content of 37.43–37.48%. A total of 24 chloroplast genomes owned typical quadripartite structures, and the number of tRNA (36 tRNAs) and rRNA (4 rRNAs) were observed for all 24 genomes. However, the number of their protein-coding sequences (CDs) varied at individual levels. No contraction and expansion of IR borders, gene rearrangements, or inversions were detected. mVISTA and Pi showed inverted repeats (IR) region was more conserved than the single copy region, coding region was more conserved than the non-coding region. Additionally, the repeat sequences and codon usage bias of Lysionotus plastomes were also conserved. Our results offer a comprehensive understanding of the genetic differences among these species and shed light on their phylogenetic systematics. Full article

Foot-and-mouth disease (FMD), bluetongue (BT), and Peste des Petits Ruminants (PPR) are major emerging and re-emerging viral infections affecting ruminants. These diseases can threaten livestock health, food security, and economic stability in low- and middle-income countries, including Algeria. However, their dynamics remain mostly unknown, limiting the implementation of effective preventive and control measures. We analyzed outbreak data reported by Algerian veterinary authorities and the WAHIS database from 2014 to 2022 for FMD; from 2006 to 2020 for BT; and from 2011 to 2022 for PPR to investigate their spatiotemporal patterns and environmental drivers. Over these periods, Algeria reported 1142 FMD outbreaks (10,409 cases; 0.16/1000 incidence), 167 BT outbreaks (602 cases; 0.018/1000), and 222 PPR outbreaks (3597 cases; 0.096/1000). Small ruminants were the most affected across all diseases, although cattle bore the highest burden of FMD. BT primarily impacted sheep, and PPR showed a higher incidence in goats. Disease peaks occurred in 2014 for FMD, 2008 for BT, and 2019 for PPR. Spatial analyses revealed distinct ecological hotspots: sub-humid and semi-arid zones for FMD and BT, and semi-arid/Saharan regions for PPR. These patterns may be influenced by species susceptibility, animal movement, trade, and climatic factors such as temperature and rainfall. The absence of consistent temporal trends and the persistence of outbreaks suggest multiple drivers, including insufficient vaccination coverage, under-reporting, viral evolution, and environmental persistence. Our findings underscore the importance of targeted species- and region-specific control strategies, including improved surveillance, cross-border coordination, and climate-informed risk mapping. Strengthening One Health frameworks will be essential to mitigate the re-emergence and spread of these diseases. Full article

Odonata constitute an important invertebrate group that is strongly dependent on water conditions and sensitive to habitat disturbances, rendering them reliable indicators of habitat quality of both aquatic and terrestrial habitats. We studied the compositional and diversity patterns of Odonates in total, and separately for the two suborders (Zygoptera, Anisoptera) in relation to geographic and ecological parameters at the riparian zone of four rivers and one canal within the Axios Delta National Park and the Natura 2000 SAC GR1220002 in northern Greece, using the line transect technique. In total, 6252 individuals belonging to 28 species were identified. The compositional and diversity patterns were significantly different between agricultural and natural sites. Odonata assemblages at croplands were comparatively poorer, dominated by a few, widely distributed, taxonomically proximal species, tolerant to environmental changes, as a result of modifications and consequent alterations of abiotic conditions at croplands, which also led to higher local contribution to β-diversity and species turnover. The absence of several percher, endophytic, and threatened species from agricultural sites led to significantly lower diversity, as a result of environmental filtering due to ecophysiological restrictions. Taxonomic and functional diversity, uniqueness, and Dragonfly Biotic Index (DBI) were significantly higher in riparian forests, due to the sensitivity of damselflies to dehydration, and the avoidance of habitat loss and extreme temperatures by dragonflies, which prefer natural shelters near the ecotone. The newly introduced Conservation Value Index (CVI) revealed 21 conservation hotspots of Odonata (14 at canopy cover sites), widely distributed within the borders of NATURA 2000 SAC GR1220002. Full article

The Arabian Gulf, bordered by major energy-producing nations, harbors diverse microalgal communities with strong potential for the bioremediation of environmental pollutants, particularly petroleum hydrocarbons. This review evaluates two key microalgal groups—micro-green algae and dinoflagellates—highlighting their distinct physiological traits and ecological roles in pollution mitigation. Dinoflagellates, including Prorocentrum and Protoperidinium, have demonstrated hydrocarbon-degrading abilities but are frequently linked to harmful algal blooms (HABs), marine toxins, and bioluminescence, posing ecological and health risks. The toxins produced by these algae can be hemolytic or neurotoxic and include compounds such as azaspiracids, brevetoxins, ciguatoxins, okadaic acid, saxitoxins, and yessotoxins. In contrast, micro-green algae such as Oedogonium and Pandorina are generally non-toxic, seldom associated with HABs, and typically found in clean freshwater and brackish environments. Some species, like Chlorogonium, indicate pollution tolerance, while Dunaliella has shown promise in remediating contaminated seawater. Both groups exhibit unique enzymatic pathways and metabolic mechanisms for degrading hydrocarbons and remediating heavy metals. Due to their respective phycoremediation capacities and environmental adaptability, these algae offer sustainable, nature-based solutions for pollution control in coastal, estuarine, and inland freshwater systems, particularly in mainland Qatar. This review compares their remediation efficacy, ecological impacts, and practical limitations to support the selection of effective algal candidates for eco-friendly strategies targeting petroleum-contaminated marine environments. Full article

Alosa immaculata Bennett, 1835, commonly referred to as the Danube shad, is an anadromous pelagic species of the Clupeidae family, and plays a significant economic role for countries bordering the Black Sea. This study investigates the occurrence of both parasites and microplastics in A. immaculata specimens collected from Sfântu Georghe, with the aim of assessing their potential impact on fish health. The overall physiological condition of the fish was evaluated using Fulton’s condition factor (K) to determine whether the presence of parasites or microplastics had any measurable effect. Five parasitic genera were identified, including one ectoparasitic species from the genus Mazocraes, and four endoparasitic species from the genera Pronoprymna, Lecithaster, Hysterotylacium, and Contracaecum. Microplastic analysis showed a dominance of particles measuring 1–5 mm (62.5%), with fibers and foils being the only morphological forms detected. The most common colors were black (45%), transparent (35%), blue (12.5%), and brown (7.5%). The distribution of microplastics was higher in the stomach than intestines. Our findings offer critical insights into the combined effects of parasitic infection and microplastic pollution on this key Black Sea species. The integrated methodology, combining parasite load, microplastic content, and condition factor analysis, marks a novel approach in fish health assessment. Full article

In 1906, Charles T. Currelly participated in excavations at Deir el-Bahri, Egypt, recovering votive offerings from the Temple of Hathor (Dynasty XVIII, reign of Hatshepsut, 1479–1458 BCE). These objects became part of the founding collection of the Royal Ontario Museum, where Currelly served as the first director. Among the offerings are several paintings on linen cloth. During examination of one painted textile, a border fringe with cream (suspected undyed), yellow and blue looped threads was sampled and analysed for dyes using gas chromatography–mass spectrometry. The yellow threads were found to contain a tannin-rich dyestuff, likely derived from Rhus spp., a common dye in ancient Egypt. Unexpectedly, the blue threads yielded brominated-indigoid marker compounds, indicating the use of a Murex-derived dye. While purple shellfish dye is rare due to the high cost of its complex production, blue shellfish dye is even more exceptional and has only been identified a handful of times on archaeological textiles. Calculated values of di-brominated to mono-brominated indigoid compounds suggests the dye originated from an indigotin-rich type of Hexaplex trunculus snail, a Mediterranean species. This finding represents a rare example of blue shellfish dye use in ancient Egypt and provides new insights into the dyeing technologies of Dynasty XVIII and the importance of this sky-blue colour in the worship of the goddess Hathor. Full article