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Keywords = ruminal fiber degradation

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14 pages, 942 KiB  
Article
Spineless Cactus (Opuntia stricta and Nopalea cochenillifera) with Added Sugar Cane (Saccharum officinarum) Bagasse Silage as Bovine Feed in the Brazilian Semi-Arid Region
by Iran Alves Torquato, Cleber Thiago Ferreira Costa, Meirielly Santos Jesus, Fernando Mata, Joana Santos, Hortência E. Pereira Santana, Daniel Pereira Silva and Denise Santos Ruzene
Ruminants 2025, 5(3), 37; https://doi.org/10.3390/ruminants5030037 - 8 Aug 2025
Viewed by 178
Abstract
The success of optimal ruminant production relies heavily on feed efficiency to deliver the necessary nutrients to animals. Nutritional deficiencies in livestock pose a significant challenge in regions experiencing prolonged fluctuations in resource availability and quality. In this context, the present study aimed [...] Read more.
The success of optimal ruminant production relies heavily on feed efficiency to deliver the necessary nutrients to animals. Nutritional deficiencies in livestock pose a significant challenge in regions experiencing prolonged fluctuations in resource availability and quality. In this context, the present study aimed to investigate the cumulative gas production (CGP) and in vitro degradability of silages made from spineless forage cactus (a native species) combined with high-fiber ingredients, to evaluate their viability as a sustainable, low-cost alternative to animal feed. The experiment involved ensiling spineless cactus genotypes with varying levels of sugarcane bagasse (0, 150, 300, 450, and 600 g/kg of dry matter) and a 1% urea–ammonium sulfate solution. The results indicated that for all genotypes studied, the CGP curves from silage composed solely of forage cactus differed significantly from those containing bagasse, which exhibited an initial phase characterized by little or no gas production. In vitro degradability was negatively influenced by the inclusion of bagasse at any level, resulting in decreased dry matter and organic matter degradability, as well as reduced CGP with increasing bagasse concentration. Therefore, the study demonstrated that the proposed combination of ingredients represents a promising sustainable feed supplement to enhance animal nutrition. Silage containing 150 g/kg of bagasse treated with urea offers a favorable balance between the energy required by rumen microflora and the benefits of fiber presence. Full article
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17 pages, 560 KiB  
Article
Pelleted Sulla Forage (Hedysarum coronarium L.) as a Resource for Sheep Feeding Systems: In Vitro Nutritional Value and Sustainability Perspectives
by Barbara Piccirillo, Marialetizia Ponte, Marianna Pipi, Antonino Di Grigoli, Adriana Bonanno, Monica I. Cutrignelli, Alessandro Vastolo and Serena Calabrò
Animals 2025, 15(15), 2322; https://doi.org/10.3390/ani15152322 - 7 Aug 2025
Viewed by 162
Abstract
Enhancing forage protein is key to sustainable ruminant nutrition. The nutritive value of Hedysarum coronarium L. was investigated by studying different preservation systems (fresh vs. dehydrated pellet vs. hay) (Exp. 1) and morphological fractions (flowers vs. leaves vs. stems) (Exp. 2). For the [...] Read more.
Enhancing forage protein is key to sustainable ruminant nutrition. The nutritive value of Hedysarum coronarium L. was investigated by studying different preservation systems (fresh vs. dehydrated pellet vs. hay) (Exp. 1) and morphological fractions (flowers vs. leaves vs. stems) (Exp. 2). For the fresh and pelleted systems, two cuts were used. Proximately, total polyphenols and condensed tannins were detected. In vitro fermentation characteristics were studied by incubating samples with buffered sheep rumen fluid, estimating methane production by volatile fatty acids. Fresh and pelleted sulla were more nutritionally advantageous than hay, in terms of metabolizable energy and protein-to-fiber ratio. Pelleting at the beginning of flowering proved to be a suitable forage for sheep feeding due to protein (15.1% DM), metabolizable energy (9.64 MJ/kg DM), structural carbohydrates (39.5% DM), and total polyphenols (13.5 GAE g/kg DM) content. This cut showed an in vitro fermentation rate (9.86 mL/h), organic matter degradability (55.7%), and volatile fatty acids (87.3 mmoL/g) that were higher (p < 0.05) than hay. Flowers and leaves showed higher (p < 0.05) levels of secondary metabolites than stems as well as lower methane production. These results suggest the potential influence of these compounds in reducing rumen emissions. Dehydration and pelleting resulted in an effective preservation method for maintaining nutrients in sulla forage. Full article
(This article belongs to the Section Animal Nutrition)
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21 pages, 719 KiB  
Article
Changes in Ruminal Dynamics and Microbial Populations Derived from Supplementation with a Protein Concentrate for Cattle with the Inclusion of Non-Conventional Feeding Sources
by Diana Sofía Torres-Velázquez, Daniel Francisco Ramos-Rosales, Manuel Murillo-Ortiz, Jesús Bernardo Páez-Lerma, Juan Antonio Rojas-Contreras, Karina Aide Araiza-Ponce and Damián Reyes-Jáquez
Fermentation 2025, 11(8), 438; https://doi.org/10.3390/fermentation11080438 - 30 Jul 2025
Viewed by 447
Abstract
Feed supplementation strategies are essential for optimizing cattle productivity, and the incorporation of non-conventional feed resources may reduce both production costs and environmental impact. This study evaluated the effects of pelletized protein concentrates (including Acacia farnesiana, A. schaffneri, and Agave duranguensis [...] Read more.
Feed supplementation strategies are essential for optimizing cattle productivity, and the incorporation of non-conventional feed resources may reduce both production costs and environmental impact. This study evaluated the effects of pelletized protein concentrates (including Acacia farnesiana, A. schaffneri, and Agave duranguensis bagasse) on rumen fermentation parameters, microbial communities, and gas emissions. Fistulated bullocks received the concentrate daily, and ruminal contents were collected and filtered before and after supplementation to assess in vitro gas and methane production, pH, and microbial composition using high-throughput sequencing of 16S rRNA and mcrA amplicons. In addition, in situ degradability was evaluated during and after the supplementation period. Supplementation led to a significant (p < 0.05) reduction in degradability parameters and methane production, along with a marked decrease in the abundance of Methanobrevibacter and an increase in succinate-producing taxa. These effects were attributed to the enhanced levels of non-fiber carbohydrates, hemicellulose, crude protein, and the presence of bioactive secondary metabolites and methanol. Rumen microbiota composition was consistent with previously described core communities, and mcrA-based sequencing proved to be a valuable tool for targeted methanogen detection. Overall, the inclusion of non-conventional ingredients in protein concentrates may improve ruminal fermentation efficiency and contribute to methane mitigation in ruminants, although further in vivo trials on a larger scale are recommended. Full article
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13 pages, 672 KiB  
Article
Exploratory Meta-Analysis of the Effect of Malic Acid or Malate Addition on Ruminal Parameters, Nutrient Digestibility, and Blood Characteristics of Cattle
by Leonardo Tombesi da Rocha, Tiago Antonio Del Valle, Fernando Reimann Skonieski, Stela Naetzold Pereira, Paola Selau de Oliveira, Francine Basso Facco and Julio Viégas
Animals 2025, 15(15), 2177; https://doi.org/10.3390/ani15152177 - 24 Jul 2025
Viewed by 244
Abstract
The aim of this study was to determine, through meta-analysis, the effects of malic acid/malate addition on ruminal and blood parameters and diet digestibility in cattle. The literature search was conducted in Web of Science, Science Direct, and Google Scholar using the terms [...] Read more.
The aim of this study was to determine, through meta-analysis, the effects of malic acid/malate addition on ruminal and blood parameters and diet digestibility in cattle. The literature search was conducted in Web of Science, Science Direct, and Google Scholar using the terms “organic acids”, “malic acid”, “malate”, and “bovine”. The database was composed of papers published between 1980 and 2023. The average effect of malate/malic acid inclusion was calculated using the “DerSimonian and Laird” random effects model. Meta-regression and subgroup analyses were conducted to explore sources of heterogeneity. Overall, malic acid (MAC) addition did not significantly affect rumen pH (ES = 0.310, p = 0.17), but subgroup analysis showed that malate increased pH (ES = 1.420, p < 0.01). MAC increased rumen propionate (ES = 0.560, p < 0.01) and total volatile fatty acids (VFAs; ES = 0.508, p = 0.03), while reducing the acetate-to-propionate ratio (p < 0.01). Starch and NDF intake were significant covariates affecting pH and VFA-related variables. MAC improved total-tract digestibility of dry matter (DM; ES = 0.547, p ≤ 0.05), crude protein (CP; ES = 0.422, p ≤ 0.05), and acid detergent fiber (ADF; ES = 0.635, p ≤ 0.05). It increased glucose levels (Overall ES = 0.170, p = 0.05) and reduced NEFA (Overall ES = −0.404, p = 0.03). In conclusion, the effectiveness of MAC depends on its chemical form. Improvements in rumen pH, fiber degradation, and blood parameters suggest more efficient energy use and potential metabolic benefits. The influence of diet-related covariates suggests that the response to MAC may vary depending on the nutritional composition of the diet. Full article
(This article belongs to the Special Issue Feed Additives in Animal Nutrition)
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12 pages, 921 KiB  
Article
Mixed Ensiling Increases Degradation Without Altering Attached Microbiota Through In Situ Ruminal Incubation Technique
by Xuanxuan Pu, Min Zhang, Jianjun Zhang, Xiumin Zhang, Shizhe Zhang, Bo Lin, Tianwei Wang, Zhiliang Tan and Min Wang
Animals 2025, 15(14), 2131; https://doi.org/10.3390/ani15142131 - 18 Jul 2025
Viewed by 251
Abstract
Mixed silage can disrupt the girder structure of rape straw, and thus facilitate ruminal degradation. Further investigation is warranted to validate this observation in vivo. The objective of this study was to investigate the degradation kinetics and bacterial colonization of mixed silage during [...] Read more.
Mixed silage can disrupt the girder structure of rape straw, and thus facilitate ruminal degradation. Further investigation is warranted to validate this observation in vivo. The objective of this study was to investigate the degradation kinetics and bacterial colonization of mixed silage during digestion using an in situ ruminal incubation technique. The experiment comprised two treatments: a mixture of rape straw and corn silage (control), and a mixed silage treatment of rape straw and whole crop corn (mixed silage). Three ruminally cannulated Holstein bulls were employed. Substrates were incubated for varying durations (4, 12, 24, 48, 72, 96, 120 and 216 h) to assess substrate degradation kinetics. Bacterial colonization were analyzed after 4- and 48-h incubation time. Mixed ensiling disrupted the fiber structure of rape straw, and thus had lower fiber content compared to the control, as NDF and ADF content ‌decreased by 55 g/kg (678 vs. 623 g/kg) and 27 g/kg (440 vs. 413 g/kg), respectively. Compared to the control group, ruminal DM disappearance of mixed silage significantly (p ≤ 0.05) increased from 315 to 366 g/kg (+16.2%) at an incubation time of 4 h, 552 to 638 g/kg (+15.6%) at 120 h, and 563 to 651 g/kg (+15.6%) at 216 h. Similarly, compared to the control group, NDF disappearance of mixed silage significantly (p ≤ 0.05) rose from 112 to 201 g/kg (+79.5%) at 4 h, 405 to 517 g/kg (+27.7%) at 120 h, and 429 to 532 g/kg (+24.0%) at 216 h. Compared to the control group, soluble and washout nutrient fractions (a) of DM or NDF fraction in mixed silage significantly (p ≤ 0.05) rose from 289 to 340 g/kg (+17.6%), potentially degradable fractions (b) of NDF increased from 310 to 370 g/kg (+19.4%), and the undegraded fraction of NDF (μNDF) decreased from 582 to 471 g/kg (−19.1%). Incubation time, apart from in the mixed ensiling treatment, altered the bacterial community. The study highlights that higher total potentially degradable fractions account for enhanced ruminal substrate degradation of mixed silage. Full article
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15 pages, 725 KiB  
Article
In Vitro Evaluation of Ruminal Fermentation and Methane Production in Response to the Addition of Modified Nano-Bentonite with or Without Saccharomyces cerevisiae to a Forage-Based Diet
by Sohila Abo-Sherif, Sobhy Sallam, Ali M. Allam, Mounir El-Adawy and Yosra Soltan
Animals 2025, 15(14), 2081; https://doi.org/10.3390/ani15142081 - 15 Jul 2025
Viewed by 391
Abstract
Modified nano-clays, alone or combined with probiotics, may offer a novel and sustainable approach to improve ruminal fermentation and mitigate CH4 emissions in high-fiber diets. This study evaluated the properties and effects of modified nano-bentonite (MNB), with or without yeast (Saccharomyces [...] Read more.
Modified nano-clays, alone or combined with probiotics, may offer a novel and sustainable approach to improve ruminal fermentation and mitigate CH4 emissions in high-fiber diets. This study evaluated the properties and effects of modified nano-bentonite (MNB), with or without yeast (Saccharomyces cerevisiae), compared to natural bentonite (NB) and monensin, using the in vitro gas production (GP) technique. The substrate used was a basal diet composed primarily of forage (Trifolium alexandrinum clover) in a 70:30 forage-to-concentrate ratio. The treatments were a control group receiving the basal diet without additives; a monensin-added diet containing 40 mg/kg of dry matter (DM); a yeast-added diet with Saccharomyces cerevisiae at 2 × 108 CFU/g of DM; a NB clay-added diet at 5 g/kg of DM; and MNB diets added at two levels (0.5 g/kg of DM (MNBLow) and 1 g/kg of DM (MNBHigh)), with or without S. cerevisiae. MNB showed a smaller particle size and improved properties, such as higher conductivity, surface area, and cation exchange capacity, than NB. Sulfur and related functional groups were detected only in MNB. No differences were observed in total GP, while both the monensin diet and the MNBHigh-with-yeast diet significantly reduced CH4 emissions compared to the control (p < 0.05). The MNBHigh-without-yeast combination significantly (p < 0.05) reduced hemicellulose degradation, as well as total protozoal counts, including Isotricha and Epidinium spp. (p < 0.05), compared to the control. Ammonia levels did not differ significantly among treatments, while NB and MNBHigh diets tended to have (p = 0.063) the highest short-chain fatty acid (SCFA) concentrations. These findings suggest the potential modulatory effects of yeast and MNB on rumen fermentation dynamics and CH4 mitigation. Full article
(This article belongs to the Special Issue Feed Additives in Animal Nutrition)
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17 pages, 1790 KiB  
Article
Interaction Between Ruminal Acetate Infusion and Diet Fermentability on Milk Fat Production in Dairy Cows
by Natalie L. Urrutia, Camila Muñoz, Emilio M. Ungerfeld, Claudia Cisterna and Kevin J. Harvatine
Animals 2025, 15(13), 1931; https://doi.org/10.3390/ani15131931 - 30 Jun 2025
Viewed by 395
Abstract
Acetate is naturally produced in the rumen through feed degradation and fermentation. It serves as a primary energy source for ruminants and as a key substrate for de novo fatty acid synthesis in the mammary gland. The interaction of exogenous acetate with different [...] Read more.
Acetate is naturally produced in the rumen through feed degradation and fermentation. It serves as a primary energy source for ruminants and as a key substrate for de novo fatty acid synthesis in the mammary gland. The interaction of exogenous acetate with different animal and dietary factors is an area of growing interest, as it may have significant implications for milk fat synthesis. This study aimed to assess the effect of two diet fermentability levels on the short-term response of lactation to acetate supplementation in dairy cows. Eight ruminally cannulated multiparous European Holstein cows were randomly assigned to treatments in a crossover design that tested the effect of diet fermentability, acetate supply, and their interaction. Using corn silage as the only forage source and a constant forage-to-concentrate ratio, high-fermentability (HF) and low-fermentability (LF) diets were formulated. Acetate supply was investigated by infusing ruminally 10 moles of sodium acetate/d (ACE) or an equimolar infusion of control (CON). Therefore, the treatments were as follows: LF + CON; LF + ACE; HF + CON; and HF + ACE. No interactions between acetate and diet fermentability were found on performance variables. Acetate infusion decreased dry matter intake (DMI), milk yield, and milk protein yield and content but did not affect milk fat yield; however, it increased milk fat concentration, and this response tended to be more pronounced in the HF diet. Acetate infusions increased plasma β-hydroxybutyrate in the HF diet, but not in the LF diet, and increased plasma non-esterified fatty acid, which was likely a lipolysis response to reduced DMI and decreased energy balance. This study demonstrates that acetate availability can be a constraint on mammary lipogenesis, even with adequate dietary fiber. Full article
(This article belongs to the Section Animal Nutrition)
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21 pages, 21284 KiB  
Article
Screening, Identification, and Whole-Genome Sequencing of Ferulic Acid Esterase-Producing Lactic Acid Bacteria from Sheep Rumen
by Mingxin Qiu, Yong Chen, Lei Wang, Luyu Li, Xiao Zhang, Zhuang Ma and Jiancheng Liu
Microorganisms 2025, 13(6), 1295; https://doi.org/10.3390/microorganisms13061295 - 31 May 2025
Viewed by 782
Abstract
Ferulic acid esterase (FAE) plays an important role in plant fiber degradation by catalyzing the hydrolysis of lignocellulosic structures. FAE-producing lactic acid bacteria (LAB), as potential probiotics, can improve ruminant digestion and gut health. In this study, two LAB strains (Q2 and Q6) [...] Read more.
Ferulic acid esterase (FAE) plays an important role in plant fiber degradation by catalyzing the hydrolysis of lignocellulosic structures. FAE-producing lactic acid bacteria (LAB), as potential probiotics, can improve ruminant digestion and gut health. In this study, two LAB strains (Q2 and Q6) with FAE activity were isolated from sheep rumen. Based on 16S rDNA sequencing, they were identified as Lactobacillus mucosae and Streptococcus equinus, respectively. Compared to Q2, Q6 demonstrated higher enzyme production, lactic acid yield, broader carbohydrate utilization, and stronger antimicrobial activity. The whole genome sequencing revealed Q2 and Q6 possess genomes of 2.14 Mbp and 1.95 Mbp, with GC contents of 46.81% and 37.30%, respectively. Q2 and Q6 exhibited the highest average nucleotide identity (ANI) with L. mucosae DSM 13345 (97.30%) and S. equinus ATCC 33317 (97.92%), respectively. The strains harbored 2101 and 1928 predicted genes, including 1984 and 1837 coding sequences (CDSs), respectively. GO enrichment analysis showed the CDSs predominantly associated with membranes (or cells), catalytic activity, and metabolic processes. KEGG analysis revealed both strains enriched in metabolic pathways, with Q6 showing a notably higher number of proteins in the ABC transporters and quorum sensing than Q2. Carbohydrate-active enzymes database (CAZy) profiling identified 75 CAZymes in Q2 and 93 CAZymes in Q6, with each strain containing one novel fae gene. Safety assessment identified 1 and 33 pathogenic genes, along with 2 and 4 putative antimicrobial peptide genes, in Q2 and Q6, respectively. Notably, Q6 carried 12 virulence factor genes. These findings suggest Q2 exhibits a superior safety profile compared to Q6, indicating a higher probability of Q2 being an effective probiotic strain. In conclusion, both LAB strains produce FAE. L. mucosae Q2 demonstrates suitability as a direct-fed probiotic for livestock, while Q6 exhibits potential as a silage inoculant, though comprehensive safety evaluations are required prior to its application. Full article
(This article belongs to the Section Veterinary Microbiology)
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19 pages, 2225 KiB  
Article
Fecal Microbiota and Performance of Dairy Cattle from a West Mexican Family Dairy Farm Supplemented with a Fiber-Degrading Enzymatic Complex
by José Martín Ruvalcaba-Gómez, Ramón Ignacio Arteaga-Garibay, Luis Miguel Anaya-Esparza, Lorena Jacqueline Gómez-Godínez, Jazmín Guadalupe Martínez-Sotelo, Elías Hernández-Cruz and Luis Eduardo Arias-Chávez
Vet. Sci. 2025, 12(6), 518; https://doi.org/10.3390/vetsci12060518 - 25 May 2025
Viewed by 709
Abstract
Non-starch polysaccharide-degrading enzymes are widely used as feed additives in monogastric and ruminant species, with positive effects reported. In this study, the commercial, fiber-degrading enzyme complex Hostazym® X, derived from Trichoderma citrinoviride (DSM34663), was included in the total mixed rations of 17 [...] Read more.
Non-starch polysaccharide-degrading enzymes are widely used as feed additives in monogastric and ruminant species, with positive effects reported. In this study, the commercial, fiber-degrading enzyme complex Hostazym® X, derived from Trichoderma citrinoviride (DSM34663), was included in the total mixed rations of 17 mid-lactating (135 ± 61 days in milk) Holstein cows for 10 weeks. A control group (n = 17) was included. Dry matter intake (DMI), milk yield, 4% fat-corrected milk, solid yield, and milk fatty acid profile were assessed. The structure and composition of fecal bacterial communities, as well as PICRUSt2-based functional prediction of bacterial communities, were also evaluated. Higher DMI and milk yield scores were observed in the supplemented group (27.20 vs. 26.59 kgDM/cow/d; and 39.01 vs. 36.70 L/cow/d, respectively). No effects were observed in fat yield, contrary to lactose and protein, which were greater in the supplemented group compared to the control group (1.18 vs. 1.13 and 1.83 vs. 1.75 kg/cow/d, respectively; p < 0.05). Palmitic and oleic acids, in addition to monounsaturated fat in milk, were increased in the supplemented group (p > 0.05). Enzyme supplementation increased the Patescibacteria (p < 0.5) and Actinobacteriota (p > 0.05) in feces, but slightly reduced the Bacteroidota and Firmicutes. The Turicibacter genus remained at a lower relative abundance after supplementation but Candidatus_Saccharimonas, Clostridioides, Prevotellaceae UCG 003, Corynebacterium, Akkermansia, Syntrophococcus, Erysipelotrichaceae UCG 008, other Lachnospiraceae, other members of the Eubacterium_coprostanoligenes_group, Bifidobacterium, Rumminococcus, Akkermansia, and other Spirochaetaceae increased, modifying the functional predicted profile of bacterial communities. In conclusion, a positive effect on performance and milk composition were observed through modulation of microbiota induced by enzyme supplementation. The enzyme complex could be a viable supplement alternative in the feeding of dairy cows in semi-intensive productive systems, mainly when an ad libitum feeding scheme is used. Full article
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13 pages, 253 KiB  
Article
Effects of Gamma Irradiation Pretreatment and Exogenous Fibrolytic Enzyme Supplementation on the Ruminal Fermentation and Nutritional Value of Typha latifolia
by Khalil Abid
Fermentation 2025, 11(6), 301; https://doi.org/10.3390/fermentation11060301 - 23 May 2025
Viewed by 657
Abstract
Efficient bioconversion of lignocellulosic biomass into ruminant feed requires advanced strategies to enhance fiber degradation and ruminal fermentation efficiency. This study evaluates the synergistic effects of gamma irradiation (150 kGy) and exogenous fibrolytic enzyme (EFE) supplementation (4 µL/g dry matter) from Trichoderma longibrachiatum [...] Read more.
Efficient bioconversion of lignocellulosic biomass into ruminant feed requires advanced strategies to enhance fiber degradation and ruminal fermentation efficiency. This study evaluates the synergistic effects of gamma irradiation (150 kGy) and exogenous fibrolytic enzyme (EFE) supplementation (4 µL/g dry matter) from Trichoderma longibrachiatum on the structural composition and ruminal fermentation of Typha latifolia. Gamma irradiation significantly reduced neutral detergent fiber (NDF) while increasing non-fiber carbohydrates (NFCs), reducing sugars (RS) and antioxidant activity. These modifications enhanced ruminal bacterial proliferation, suppressed ruminal protozoal populations, and improved ruminal fermentation efficiency by increasing gas production, dry matter degradability, and NDF degradability. Additionally, irradiation decreased ruminal NH3-N concentrations and branched-chain volatile fatty acids (VFAs) without affecting total VFA production and ruminal pH. While EFE alone accelerated only ruminal fermentation, its combination with irradiation further reduced NDF content, enriched NFC and RS, and enhanced fermentation efficiency. This dual treatment increased total VFA production, shifted fermentation pathways toward propionate synthesis, and reduced acetate and branched-chain VFA levels. It also stimulated ruminal bacterial populations without altering ruminal pH. These findings highlight gamma irradiation as an effective pretreatment to enhance EFE hydrolysis, offering a promising strategy to improve the nutritional value of low-quality forages to integrate into ruminant diets. Full article
(This article belongs to the Special Issue Research Progress of Rumen Fermentation)
11 pages, 797 KiB  
Article
Comparison of In Vitro Fermentation Characteristics Among Five Maize Varieties
by Fabio Zicarelli, Serena Calabrò, Piera Iommelli, Micaela Grossi, Federico Infascelli and Raffaella Tudisco
Fermentation 2025, 11(5), 285; https://doi.org/10.3390/fermentation11050285 - 15 May 2025
Viewed by 640
Abstract
Maize (Zea mays L.) silage in the irrigated and flat areas of Italy represents the most important large ruminant feed crop due to the high dry matter yield and nutritive value per hectare. The aim of the investigation was to evaluate the [...] Read more.
Maize (Zea mays L.) silage in the irrigated and flat areas of Italy represents the most important large ruminant feed crop due to the high dry matter yield and nutritive value per hectare. The aim of the investigation was to evaluate the chemical composition and the in vitro fermentation patterns of five maize varieties (Tiesto, R700 1, MAS 78.T, DKC 7074 and KWS Kantico) freshly chopped and preserved via ensiling. The results indicated that the chemical composition was not significantly different among varieties. The substrates were incubated for 72 h with buffered rumen fluid collected from cow. The ensiling process slightly reduced gas production and fermentation kinetics, likely due to the consumption of soluble sugars during fermentation. Organic matter loss (OM loss) differed significantly (p < 0.01) among varieties in ensiled maize, correlating with their neutral detergent fiber (NDF) content. While total volatile fatty acid (VFA) production showed no significant differences between varieties, the buffer capacity ratio (BCR), an indicator of protein degradation, varied significantly. Ammonia production (NH3) was significantly higher in ensiled samples, supporting previous findings that ensiling increases non-protein nitrogen (NPN) due to microbial proteolysis and plant enzyme activity. The gas production profiles and fermentation rates over time showed minor differences between fresh and ensiled samples, with fresh material exhibiting faster fermentation kinetics due to the presence of soluble sugars. These findings highlight the importance of evaluating maize silage quality to optimize ruminant nutrition and feed efficiency. Full article
(This article belongs to the Special Issue Ruminal Fermentation)
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13 pages, 5029 KiB  
Article
Crystal Structure of the Multidomain Pectin Methylesterase PmeC5 from Butyrivibrio fibrisolvens D1T
by Vincenzo Carbone, Kerri Reilly, Carrie Sang, Linley R. Schofield, William J. Kelly, Ron S. Ronimus, Graeme T. Attwood and Nikola Palevich
Biomolecules 2025, 15(5), 720; https://doi.org/10.3390/biom15050720 - 14 May 2025
Viewed by 494
Abstract
Pectin is a dynamic and complex polysaccharide that forms a substantial proportion of the primary plant cell wall and middle lamella of forage ingested by grazing ruminants. Pectin methylesterases (PMEs) are enzymes that belongs to the carbohydrate esterase family 8 (CE8) and catalyze [...] Read more.
Pectin is a dynamic and complex polysaccharide that forms a substantial proportion of the primary plant cell wall and middle lamella of forage ingested by grazing ruminants. Pectin methylesterases (PMEs) are enzymes that belongs to the carbohydrate esterase family 8 (CE8) and catalyze the demethylesterification of pectin, a key polysaccharide in cell walls. Here we present the crystal structure of the catalytic domain of PmeC5 that is associated with a gene from Butyrivibrio fibrisolvens D1T that encodes a large secreted pectinesterase family protein (2089 aa) determined to a resolution of 1.33 Å. Protein in silico modelling of the secreted pectinesterase confirmed the presence of an additional pectate lyase (PL9) and adhesin-like domains. The structure of PmeC5 was the characteristic right-handed parallel β-helical topology and active site residues of Asp231, Asp253, and Arg326 typical of the enzyme class. PmeC5 is a large modular enzyme that is characteristic of rumen B. fibrisolvens megaplasmids and plays a central role in degrading plant cell wall components and releasing methanol in the rumen environment. Such secreted PMEs are significant contributors to plant fiber digestion and methane production, making them attractive targets for both methane mitigation strategies and livestock productivity enhancement. Full article
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21 pages, 5881 KiB  
Article
Comparative Analysis of Microbial–Short-Chain Fatty Acids–Epithelial Transport Axis in the Rumen Ecosystem Between Tarim Wapiti (Cervus elaphus yarkandensis) and Karakul Sheep (Ovis aries)
by Jianzhi Huang, Yueyun Sheng, Xiaowei Jia, Wenxi Qian and Zhipeng Li
Microorganisms 2025, 13(5), 1111; https://doi.org/10.3390/microorganisms13051111 - 12 May 2025
Cited by 1 | Viewed by 585
Abstract
Under long-term ecological stress, the Tarim wapiti (Cervus elaphus yarkandensis) has evolved unique adaptations in digestive physiology and energy metabolism. A multi-omics comparison of three Tarim wapiti and five Karakul sheep was used to examine the synergistic mechanism between rumen bacteria, [...] Read more.
Under long-term ecological stress, the Tarim wapiti (Cervus elaphus yarkandensis) has evolved unique adaptations in digestive physiology and energy metabolism. A multi-omics comparison of three Tarim wapiti and five Karakul sheep was used to examine the synergistic mechanism between rumen bacteria, short-chain fatty acids, and host epithelial regulation in order to clarify the mechanism of high roughage digestion efficiency in Tarim wapiti. Metagenomic sequencing (Illumina NovaSeq 6000) and gas chromatography revealed that Tarim wapiti exhibited significantly higher acetate and total VFA (TVFA) concentrations compared to Karakul sheep (p < 0.01), accompanied by lower ruminal pH and propionate levels. Core microbiota analysis identified Bacteroidetes (relative abundance: 52.3% vs. 48.1%), Prevotellaceae (22.7% vs. 19.4%), and Prevotella (18.9% vs. 15.6%) as dominant taxa in both species, with significant enrichment of Bacteroidetes in wapiti (p < 0.01). Functional annotation (PICRUSt2) demonstrated enhanced glycan biosynthesis (KEGG ko00511), DNA replication/repair (ko03430), and glycoside hydrolases (GH20, GH33, GH92, GH97) in wapiti (FDR < 0.05). Transcriptomic profiling (RNA-Seq) of rumen epithelium showed upregulated expression of SCFA transporters (PAT1: 2.1-fold, DRA: 1.8-fold, AE2: 2.3-fold; p < 0.01) and pH regulators (Na+/K+ ATPase: 1.7-fold; p < 0.05) in wapiti. Integrated analysis revealed coordinated microbial–host interactions through three key modules: (1) Bacteroidetes-driven polysaccharide degradation, (2) GHs-mediated fiber fermentation, and (3) epithelial transporters facilitating short-chain fatty acids absorption. These evolutionary adaptations, particularly the Bacteroidetes–short-chain fatty acids–transporter axis, likely underpin the wapiti’s superior roughage utilization efficiency, providing molecular insights for improving ruminant feeding strategies in an arid environment. Full article
(This article belongs to the Section Gut Microbiota)
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16 pages, 1903 KiB  
Article
Species and Harvest Time of Fresh Tropical Grasses Affect Rumen Fermentation as Determined by In Sacco and In Vitro Incubations
by Huyen Thi Duong Nguyen, Jill Derix, Wouter Hendrikus Hendriks, Jan Thomas Schonewille, Trach Xuan Nguyen and Wilbert Frans Pellikaan
Fermentation 2025, 11(5), 276; https://doi.org/10.3390/fermentation11050276 - 12 May 2025
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Abstract
The consumption of forages high in slow-degradable carbohydrates by dairy cattle leads to greater ruminal acetate production, which benefits milk fat content. Although tropical grasses are typically rich in fibrous materials, the milk fat content of dairy cows in Southeast Asia is low. [...] Read more.
The consumption of forages high in slow-degradable carbohydrates by dairy cattle leads to greater ruminal acetate production, which benefits milk fat content. Although tropical grasses are typically rich in fibrous materials, the milk fat content of dairy cows in Southeast Asia is low. Here, we investigate the effects of the species and harvest time of three common tropical grasses (Guinea, King, and Mulato II) harvested at three instances (early, normal, late) on in sacco degradation kinetics and in vitro gas production (IVGP) characteristics. Grass samples were subjected to (1) chemical analysis, (2) a fully automated in vitro gas recording system using rumen fluid to measure fermentation characteristics over 72 h, and (3) in sacco degradation using the nylon bag technique, employing seven incubation times up to 336 h. Forage quality decreased with maturity, as reflected in changes to digestibility and fiber content. Overall, early harvested grasses yielded the highest total gas production (311 ± 12.5 mL/g OM) followed by normal (300 ± 45.7 mL/g OM) and late (273 ± 19.5 mL/g OM) harvested grasses. The in vitro fermentable fraction (A1 + A2) was the highest for early harvested grasses, with the A2 parameter, relevant for milk fat content, being the highest for Guinea (81.6% A2/(A1 + A2)) and the lowest for King grass (71.0% A2/(A1 + A2)). Consequently, early harvested Guinea had the longest incubation times (10.5 h) and lowest fermentation rates (Rmax2 = 12.8 mL/g OM/h). Regression analysis showed relationships between NDF content and degradability. Harvesting tropical grass earlier than customarily practiced enhanced forage quality and ruminal degradability. Of the three grasses studied, each at three levels of maturity, early harvested Guinea grass was the most promising candidate for improving milk fat content in Southeast Asian dairy cows. This grass showed a high fermentable OM content, with a large proportion of slow-degradable carbohydrates. Full article
(This article belongs to the Special Issue Ruminal Fermentation)
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18 pages, 5172 KiB  
Article
Can Ammonium Nitrate Be a Strategic Tool by Replacing Urea as a Nitrogen Supplementation Source to Beef Cattle in Intensified Grazing Systems?
by Willian Rufino Andrade, Analisa Vasques Bertoloni, Flavio Perna Junior, Althieres José Furtado, Ana Laura Januário Lelis, Murilo Trettel, Alexandre Berndt, Patricia Perondi Anchão Oliveira, Angélica Simone Cravo Pereira and Paulo Henrique Mazza Rodrigues
Fermentation 2025, 11(5), 261; https://doi.org/10.3390/fermentation11050261 - 6 May 2025
Viewed by 619
Abstract
For cattle raised on tropical grass pastures, it is essential to explore strategies that circumvent climatic seasonality that affect forage availability and quality. We hypothesize that the intensification of grazing systems, with rotational and deferred methods, combined with ammonium nitrate or urea supplementation, [...] Read more.
For cattle raised on tropical grass pastures, it is essential to explore strategies that circumvent climatic seasonality that affect forage availability and quality. We hypothesize that the intensification of grazing systems, with rotational and deferred methods, combined with ammonium nitrate or urea supplementation, are excellent strategies to increase ruminal efficiency and animal productivity. For this purpose, 8 cattle with cannulas were distributed in rotational and deferred grazing systems, supplemented with urea or ammonium nitrate, and evaluated throughout the four seasons of the year over a period of two years. Dry matter intake and digestibility were measured using indigestible neutral detergent fiber, titanium dioxide and chromium oxide markers. Ruminal kinetics and degradability of DM and nutrients were measured using the nylon bag technique. Urine parameters were used to estimate microbial nitrogen compounds synthesis and efficiency of microbial protein synthesis. The rotational grazing improves NPN intake, NDF and ADF digestibility, and gross energy. Ammonium nitrate supplementation showed improved efficiency in microbial protein synthesis without negatively affecting feed intake, positioning it as a valuable nitrogen source for grazing cattle. Full article
(This article belongs to the Special Issue Ruminal Fermentation)
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