Search Results (76)

Climate warming can alter lake zooplankton through changes in thermal structure, oxygen availability, nutrient cycling, and phytoplankton dynamics, but decadal evidence from African lakes remains scarce. We compared zooplankton size structure and biomass in Lake Bosumtwi, Ghana, between 2005–2006 and 2018–2020, using harmonised historical data and recent observations of zooplankton, temperature, dissolved oxygen, nutrients, chlorophyll a, and water transparency. Water temperatures increased across all depth strata, with the largest increase in the epilimnion (+0.30 °C), while dissolved oxygen declined by approximately 27%. Epilimnetic total nitrogen, total phosphorus, and chlorophyll a increased, and water transparency decreased. Chlorophyll a rose by 142% between periods, while mean total zooplankton biomass increased 2.33-fold, mainly because of higher copepod biomass. Mean body length decreased in nauplii but increased in copepodites and adult copepods, indicating contrasting stage-specific shifts in size structure. The median zooplankton biomass-to-chlorophyll a ratio increased from 59.46 to 79.24 (Mann–Whitney U = 210, p = 0.032). Biomass differed significantly among years for copepods, rotifers, and total zooplankton, but not for cladocerans. These findings show that warmer and less oxygenated conditions with higher chlorophyll a concentrations were accompanied by a substantial increase in copepod-dominated biomass and stage-specific changes in zooplankton size structure. Full article

Perennially ice-covered lakes in the McMurdo Dry Valleys, Antarctica, are shaped by permanent stratification, extreme oligotrophy, and salinity gradients, yet these features are vulnerable to climate-driven hydrologic change. Because phytoplankton and associated bacteria regulate carbon flow and nutrient cycling, understanding how algal–bacterial consortia respond to disturbance is key to predicting ecosystem change. We used enrichment cultures from Lakes Bonney and Fryxell to test responses to nutrient deprivation and salinity alteration, two perturbations relevant to climate-driven changes in hydrologic connectivity and expansion of open water moats. Autotrophic enrichments lacking added organic carbon were used to enrich algal–bacterial consortia dependent on photosynthetically derived substrates. Community responses were assessed with 16S rRNA amplicon sequencing of size-fractionated samples, allowing comparison of particle-associated and planktonic communities. Short-term nutrient limitation produced only limited shifts in community composition, indicating resistance to transient nutrient stress. However, bacterial communities were strongly structured by size fraction: particle-associated assemblages separated clearly from planktonic communities and were enriched in taxa linked to algal surfaces and polysaccharide-rich microhabitats, including Flavobacteriales, Sphingobacteriales, Rhizobiales, and Rhodobacterales. Salinity perturbation drove stronger restructuring of bacterial communities, with shallow Lake Bonney enrichments showing greater sensitivity than deeper communities. These findings suggest that algae-associated bacterial communities help structure Antarctic algal enrichment cultures and may influence microbial responses to climate-linked disturbance. Full article

Phytoplankton are primary producers in the aquatic ecosystems whose pigments, cell size, and physiological state affect how they absorb light and fix carbon. The phytoplankton absorption coefficient (ɑ_ph(λ)) in the visible spectrum is a fundamental cellular optical property that determines phytoplankton–light interactions in the marine environment. This property links biological processes to ocean color remote sensing reflectance (Rrs), enabling an assessment of environmental and biogeochemical conditions in the ocean using ocean color satellites. This study presents a multi-stage systematic review of six decades (1965–2025) of ɑ_ph(λ) research, with a focused synthesis of developments in the past decade. A bibliometric analysis empirically examines the research growth of the field and its thematic convergence into methodological divergence across six decades. Cluster analysis was used to compile influential research topics as well as emerging trends, to determine the scope and design of the systematic review. A focused systematic review of studies in the past decade (2015–2025) has been carried out to identify conceptual and theoretical advances, major observational and algorithmic improvements, and ongoing challenges. The data analyses highlight the accuracy achieved by various studies, the complexity of applications of algorithms, and product-focused developments. The ongoing challenges identified include resolving optical degeneracy, vertical structure acquisition, and scaling methods for operational use. This review concludes the centrality of ɑ_ph(λ) as a key parameter to next-generation ocean color science, biogeochemical modeling, and climate-related ecosystem monitoring. Full article

Phytoplankton primary production (PP) underpins marine ecosystems. In winter marginal seas, the magnitude and size structure of PP not only sustain overwintering zooplankton but also shape larval fish survival and fishery resources in the following year. We conducted two cruises in the fish overwintering grounds of the East China Sea shelf to investigate the spatial distribution, size structure, and environmental controls of net primary production (NPP). Winter NPP was generally low relative to the annual range. Nutrient concentrations at most stations exceeded potential limitation thresholds, whereas the mixed-layer mean light exposure (LE) fell below the light-saturation threshold at most stations, indicating that insufficient light availability was primarily associated with sub-saturating light conditions of low winter productivity. Among size classes, the nano-sized fraction dominated NPP, followed by the pico-sized fraction, while the micro-sized fraction contributed least; however, the relative contribution of the micro-sized fraction increased in February. Measured values of two key parameters widely used in satellite-based NPP models—PBopt (optimal chlorophyll-specific carbon fixation rate) and F (a dimensionless light-related factor for the vertical distribution of primary production)—were both lower than model predictions, and the magnitude of deviation varied with water depth and mixing conditions. These findings refine our understanding of biogeochemical processes in overwintering grounds of winter marginal seas. Full article

Phytoplankton size classes (PSCs) fundamentally regulate ocean productivity, biogeochemical cycling, and carbon export, yet their distribution and optical variability across the Arabian Sea remain poorly constrained. This study develops and validates a regionally tuned absorption-based approach for phytoplankton size class estimation using in situ phytoplankton absorption spectra (a_ph(λ)) collected during six research cruises between 2016 and 2024. A significant power-law relationship between a_ph(443) and the spectral slope (S_443–510) (R² = 0.963, p < 0.001) provided a consistent optical basis for distinguishing PSCs. Co-located HPLC pigment data were used to derive empirical a_ph(443) thresholds for pico- (≤0.011 m⁻¹), nano- (0.011–0.059 m⁻¹), and micro-phytoplankton (>0.059 m⁻¹). Class-specific mean spectra showed clear optical distinctions consistent with size-dependent pigment packaging. Model evaluation showed reduced error and improved regression agreement relative to existing a_ph- and chl-a-based models when applied to the Arabian Sea dataset, with regression slopes close to unity (0.78–0.81) across all PSCs. This regional model also improved representation of transitional nano communities, which are commonly associated with higher uncertainties in global models. The empirical relationships developed in this study were applied to VIIRS Level 3 a_ph(443) data for 2024 to generate PSC distributions. Satellite-derived PSC fields revealed pronounced spatial gradients and regional contrasts across the Arabian Sea, including micro-phytoplankton blooms in the northern Arabian Sea and mixed nano-dominated communities along the western Arabian Sea (Somali coast). Pico-phytoplankton dominated the low-absorption oligotrophic offshore waters, while nano-phytoplankton were most common in transitional regions influenced by moderate nutrient inputs. Taken together, these results demonstrate that the combined a_ph(443)-S_443–510 framework provides a practical, regionally optimized method for retrieving PSCs at synoptic scales across the Arabian Sea, supporting improved bio-optical modelling and satellite-based monitoring of phytoplankton community structure in this region. Full article

Marine mesozooplankton (0.2–20 mm), as a critical trophic link between primary producers and higher trophic levels, are pivotal drivers of trophic cascades regulating pelagic ecosystem structure and function. This review synthesizes recent advances in understanding mesozooplankton-mediated trophic cascades (MMTC), with a focus on selective feeding mechanisms, and presents an original, integrated quantitative framework that fills gaps in quantification and prediction of MMTC. This framework includes the following: a dual-pathway conceptual model distinguishing density-mediated and trait-mediated cascades; a three-level grazing rate correction model addressing long-standing underestimations of mesozooplankton direct grazing rate on phytoplankton; a comprehensive Cascade Strength Index for quantifying cascade intensity; an extended numerical model—NPMZ model (Nutrient–Phytoplankton–Microzooplankton–Mesozooplankton) for simulating MMTC dynamics and their biogeochemical impacts. The review further elucidates the spatiotemporal heterogeneity of MMTC and its implications for plankton community size structure and biological carbon pump efficiency. It also systematically assess the combined impacts of global change drivers (ocean warming, acidification, eutrophication) on MMTC and their ecological consequences. This review advances the theoretical framework of marine trophic cascade research by establishing a unified quantitative paradigm for MMTC and provides mechanistic insights and predictive tools for understanding how climate change modulates pelagic food web dynamics and marine ecosystem services. Moreover, the proposed integrated research paradigm combining molecular tools, multi-factor experiments, and high-resolution numerical modeling offers a critical roadmap for future MMTC research in the Anthropocene. This provides a scientific basis for the conservation and adaptive management of marine ecosystems under global change. Full article

Cyanobacterial blooms directly influence the structure and function of zooplankton communities; however, the trophic interactions between small tropical cladocerans and the cyanobacterium Dolichospermum are still poorly understood. We evaluated how two strains of Dolichospermum planctonicum (differing in filament length) affect the grazing rates of three tropical cladocerans with distinct size and prey spectra—Daphnia gessneri, Ceriodaphnia silvestrii, and Macrothrix paulensis—in single and mixed diets with the chlorophyte Monoraphidium capricornutum. Overall, grazing rates decreased as food concentration increased across all phytoplankton species. Daphnia was the most efficient filter-feeder in all diets, yet the responses to different-sized Dolichospermum strains varied between animals and diets. Shorter Dolichospermum was the least consumed food item in single diets, as opposed to what was observed in the mixed diets, where it was the most consumed. This reversal suggests that the mechanism limiting grazing on Dolichospermum might change drastically depending on the food context (availability of other food sources). Positive selectivity for both Dolichospermum and Monoraphidium was observed for all cladocerans. These findings highlight that the morphology of Dolichospermum planctonicum and the availability of alternative food sources during its blooms are critical regulators of grazing. The results also provide evidence of diverse feeding strategies of tropical cladocerans to prey on the filamentous cyanobacterium Dolichospermum planctonicum. Full article

This study investigated the spatial and seasonal dynamics of phytoplankton communities in Jaran Bay, inner Hansan Bay, and outer Hansan Bay, with particular emphasis on size structure and pigment-based indicators of productivity and physiological status. Water sampling was conducted during May, August, and October in 2020, 2022, and 2023 and phytoplankton communities were analyzed using size-fractionated chlorophyll a measurements and high-performance liquid chromatography (HPLC) pigment analysis. Chlorophyll a concentrations exhibited pronounced seasonality, with consistently elevated values in August across all bays. Diatoms were predominant throughout the study period; however, their relative contribution declined in outer Hansan Bay during summer, coinciding with increased contributions from cryptophytes and cyanobacteria. Size-fractionated analyses revealed that large-sized phytoplankton (>20 µm) predominantly consisted of diatoms, whereas small-sized phytoplankton (<20 µm) were composed of diatoms and cryptophytes. Comparisons between fluorometric and pigment-based approaches indicated that pigment-based diagnostics overestimated microphytoplankton contributions, attributable to the presence of small-sized diatoms. Pigment indices further revealed that large-sized phytoplankton were characterized by higher photosynthetic carotenoid concentrations and lower photoprotective carotenoid ratios, indicative of enhanced photosynthetic activity and productivity. Overall, these findings highlight the critical role of phytoplankton size structure in regulating productivity and physiological responses in aquaculture-dominated coastal bays. Full article

This study investigates the Serial Discontinuity Concept (SDC) by analyzing the size of phytoplankton structures across 13 cascade dams in the fragmented East River, China. The results showed that dam flow-regulation minimized seasonal differences in total chlorophyll-a (Chl-a). Spatially, midstream Chl-a was higher during the dry period, whereas increased wet periods were linked to reservoir effects and nutrient conditions. Nano-phytoplankton dominated during both periods, while micro-phytoplankton declined during wet periods due to higher pH and transparency. Micro-Chl-a increased downstream in dry periods as a result of dissolved oxygen levels and silicate. Self-organizing maps revealed greater size–class variability during dry periods, with pH and conductivity identified as key regulators. Aulacoseira granulata (micro-phytoplankton) and Anabaena oscillarioides (also micro-phytoplankton) were co-dominant. This pattern suggests that the flow regulation and water impoundment by cascade dams during the wet period created localized lentic conditions with enhanced water stability, which favored the proliferation of these species, despite the increased seasonal discharge at the basin scale. These findings support the SDC in that (1) longitudinal Chl-a variations empirically validated SDC, especially during dry periods, and (2) a spatially periodic Chl-a pattern was identified, termed the Cascade Cycle of SDC (CC-SDC). Full article

Clear Lake in Lake County, CA, USA has experienced highly toxic cyanobacterial blooms for more than a decade, with multiple cyanobacterial taxa and cyanotoxins appearing sporadically, typically throughout much of the early-spring to late-fall seasons. Recurring blooms have been attributed to high internal nutrient loads within the lake, with hydrography and hydrology playing important but still poorly documented roles in controlling the availability of growth-limiting elements to the phytoplankton community. The lake is approximately 180 km² in areal extent and composed of three somewhat disjointed lobes, or ‘Arms’. The large size of the lake presents a formidable task for synoptic lakewide surveys and for understanding the specific features that stimulate the development and magnitude of harmful blooms. We conducted a study in August of 2020 that involved the use of an autonomous underwater vehicle and deployment of a hand-held water column profiler to describe the lakewide status of various biological, chemical, and physical features. Discrete water samples were also collected from ten stations located throughout the lake to produce a near-synoptic depiction of lake status. Additionally, a mechanically driven, continuously monitoring water-column profiler was deployed at a central lake location to document short-term temporal (minutes to months) changes in water-column structure and chemistry. Wind was a dominant feature affecting the lake’s chemistry and biology during the study, resulting in massive concentrations and dramatic spatial heterogeneity of phytoplankton biomass and cyanotoxins in the eastern and southeastern Arms of the lake, and confirmed by the analysis of discrete water samples. Unique insight into the processes leading to or prolonging blooms was revealed by the water column profiler, which demonstrated rapid development (within a few hours) of suboxic conditions during periods of calm winds. We speculate that these quiescent periods are fundamental events in the lake’s ecology, resulting in episodic ‘pulses’ of nutrient release from the sediments, which can stimulate or refuel blooms of cyanobacteria in the water column. Full article

Predation plays a key organizational role in structuring plankton communities. However, predator diversity can lead to emergent effects in which the outcomes of predator–prey interactions are modified. The response of the plankton community to three different predator regimes at natural densities was investigated over a 10-day mesocosm experiment in a temperate, temporarily open/closed estuary in South Africa. The regimes included: (1) predation by the mysid, Mesopodopsis wooldridgei; (2) predation by larval Rhabdosargus holubi and (3) a combination of the two predators. M. wooldridgei are primarily copepod feeders, and juvenile R. holubi consume a broader diet including zooplankton, algae and invertebrate fauna. In the absence of predators, zooplankton grazing contributed to a significant decline in the phytoplankton size structure and total chlorophyll-a (Chl-a) concentration. The presence of the predators contributed to a decline in the total zooplankton abundances and biomass which dampened the grazing impact of the zooplankton on the total Chl-a, consistent with the expectations of a trophic cascade. There were no significant differences in the size structure of the phytoplankton community, total Chl-a concentration and the total zooplankton abundances and biomass between the different predator treatments, suggesting that the increase in predator diversity did not contribute to increased prey risk. These findings highlight both the direct and indirect ecological impacts of predators on plankton dynamics. Full article

Since the mid-1980s, the Mediterranean Sea’s surface and deeper layers have warmed at unprecedented rates, with recent projections identifying it as one of the regions most impacted by rising global temperatures. Metrics that characterize phytoplankton abundance, phenology and size structure are widely utilized as ecological indicators that enable a quantitative assessment of the status of marine ecosystems in response to environmental change. Here, using an extensive, updated in situ pigment dataset collated from numerous past research campaigns across the Mediterranean Sea, we re-parameterized an abundance-based phytoplankton size class model that infers Chl-a concentration in three phytoplankton size classes: pico- (<2 μm), nano- (2–20 μm) and micro-phytoplankton (>20 μm). Following recent advancements made within this category of size class models, we also incorporated information of sea surface temperature (SST) into the model parameterization. By tying model parameters to SST, the performance of the re-parameterized model was improved based on comparisons with concurrent, independent in situ measurements. Similarly, the application of the model to remotely sensed ocean color observations revealed strong agreement between satellite-derived estimates of phytoplankton size structure and in situ observations, with a performance comparable to the current regional operational datasets on size structure. The proposed conceptual regional model, parameterized with the most extended in situ pigment dataset available to date for the area, serves as a suitable foundation for long-term (1997–present) analyses on phytoplankton size structure and ecological indicators (i.e., phenology), ultimately linking higher trophic level responses to a changing Mediterranean Sea. Full article

Understanding the dynamics of phytoplankton size classes (PSCs), highly sensitive to environmental conditions in marine ecosystems, is crucial for comprehending variations in primary production and biogeochemical processes. Over the past decades, the littoral seas of Korea have undergone significant environmental shifts, yet long-term studies on PSC distribution remain limited. Employing a regionally developed deep neural network model and 20 years (2003–2022) of satellite ocean color data, we assessed spatiotemporal variability in dominant PSCs in the Yellow Sea (YS), South Sea of Korea (SS), and East/Japan Sea (EJS). Micro-size phytoplankton dominated turbid nearshore waters of the YS and western SS year-round, while nano-size phytoplankton were seasonally prevalent in the central YS and EJS. Pico-size phytoplankton exhibited strong summer dominance under warm, stratified, nutrient-depleted conditions, showing a sustained long-term expansion across all regions, particularly in the southwestern EJS. This expansion was closely linked to rising sea surface temperatures and changes in nutrient stoichiometry. The increasing dominance of smaller phytoplankton may reduce primary production, alter food web structure, and ultimately diminish fishery productivity. These findings provide new insight into climate-driven ecological shifts in marginal seas and underscore the need for integrated long-term monitoring to anticipate future ecosystem responses in a rapidly warming ocean. Full article

Submerged macrophytes can profoundly influence interactions between aquatic predators and their prey due to changes in foraging efficiencies, pursuit time and swimming behaviors of predator–prey participants. Water hyacinth, Eichhornia crassipes (Mart.) Solms-Laub. (Pontederiaceae), is the most widely distributed of the aquatic invasive weeds in South Africa. This invasive weed contributes to changes in physicochemical (turbidity, temperature and water column stratification) and biological (total chlorophyll-a (Chl-a) concentrations and species composition and distribution of vertebrates and invertebrates) variables within freshwater systems of the region. The current study assessed the influence of varying levels of water hyacinth cover (0, 25, 50 and 100% treatments) on the total Chl-a concentration, size structure of the phytoplankton community and the strength of the interaction between a predatory notonectid, Enithares sobria, and zooplankton using a short-term 10-day long mesocosm study. There were no significant differences in selected physicochemical (temperature, dissolved oxygen, total nitrogen and total phosphate) variables in these different treatments over the duration of this study (ANOVA; p > 0.05 in all cases). Results of this study indicate that treatment had a significant effect on total Chl-a concentrations and total zooplankton abundances. The increased surface cover of water hyacinth contributed to a significant reduction in total Chl-a concentrations and a significant increase in total zooplankton abundances (ANCOVA; p < 0.05 in both cases). The increased habitat complexity conferred by the water hyacinth root system provided refugia for zooplankton. The decline in total Chl-a concentration and the size structure of the phytoplankton community under elevated levels of water hyacinth cover can therefore probably be related to both the unfavorable light environment conferred by the plant cover and the increased grazing activity of zooplankton. The presence of the water hyacinth thus suppressed a predator–prey cascade at the base of the food web. Water hyacinth may, therefore, have important implications for the plankton food web dynamics of freshwater systems by reducing food availability (Chl-a), changing energy flow and alternating the strength of interactions between predators and their prey. Full article

Benthic–pelagic coupling is a key approach to studying the structure and energy dynamics of shallow marine food webs. The movement and foraging patterns of consumers are major drivers of nutrient and energy distribution in ecosystems and are critical for maintaining ecosystem stability. To better understand the energy coupling of consumers between coastal marine habitats, this study employed a Bayesian mixture model using SC and SI data. By classifying functional groups based on taxonomy, morphological traits, and feeding ecology similarities, we constructed a trophic network and analyzed the changes in fish feeding patterns and the dynamics of benthic–pelagic coupling across environmental gradients. The results show that the primary carbon sources in the Beibu Gulf are phytoplankton, particulate organic matter (POM), and sediment organic matter (SOM), with phytoplankton contributing the most. Pelagic food subsidies dominate the food web. Small sized, abundant planktivorous and benthivorous fish act both as predators and important prey, transferring carbon and energy derived from both benthic and pelagic zones to higher trophic-levels. Larger, higher-trophic-level piscivorous fish serve as key energy couplers, preying on organisms from various habitats. Depth and chlorophyll–a (Chl–a) are the two key variables influencing the trophic structure of fish, with opposite gradient patterns observed for each. Along the depth gradient, fish exhibit clear adaptive foraging strategies. As water depth increases, fish tend to forage more within their specific habitat (either benthic or pelagic), with prey types continually changing, leading to a gradual reduction in the strength of benthic–pelagic trophic coupling. This study reveals the spatial resource utilization patterns and adaptive foraging strategies of fish in the Beibu Gulf, providing deeper insights into the structure and spatial variation of food webs. It also enhances our understanding of ecosystem responses to human pressures and global changes, offering valuable perspectives for predicting these responses. Full article