Search Results (59)

Cadmium (Cd) is a highly toxic heavy metal that can greatly affect crops and pose a threat to food security. Plant growth-promoting rhizobacteria (PGPR) are capable of alleviating the harm of Cd to crops. In this research, a Cd-tolerant PGPR strain was isolated and screened from the root nodules of semi-wild soybeans. The strain was identified as Pseudomonas sp. strain KM25 by 16S rRNA. Strain KM25 has strong Cd tolerance and can produce indole-3-acetic acid (IAA) and siderophores, dissolve organic and inorganic phosphorus, and has 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity. Under Cd stress, all growth indicators of soybean seedlings were significantly inhibited. After inoculation with strain KM25, the heavy metal stress of soybeans was effectively alleviated. Compared with the non-inoculated group, its shoot height, shoot and root dry weight, fresh weight, and chlorophyll content were significantly increased. Strain KM25 increased the superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities of soybean seedlings, reduced the malondialdehyde (MDA) content, increased the Cd content in the roots of soybeans, and decreased the Cd content in the shoot parts. In addition, inoculation treatment can affect the community structure of endophytic bacteria in the roots of soybeans under Cd stress, increasing the relative abundance of Proteobacteria, Bacteroidetes, Sphingomonas, Rhizobium, and Pseudomonas. This study demonstrates that strain KM25 is capable of significantly reducing the adverse effects of Cd on soybean plants while enhancing their growth. Full article

Forest fires are one of the significant factors affecting forest ecosystems globally, with their impacts on soil microbial community structure and function drawing considerable attention. This study focuses on the short-term effects of different fire intensities on soil bacterial community structure and function in Abies (Pinus densata) forests within the Birishen Mountain National Forest Park in southeastern Tibet. High-throughput sequencing technology was employed to analyze soil bacterial community variations under unburned (C), low-intensity burn (L), moderate-intensity burn (M), and high-intensity burn (S) conditions. The results revealed that with increasing fire severity, the dominant phylum Actinobacteriota significantly increased, while Proteobacteria and Acidobacteriota markedly decreased. At the genus level, the relative abundance of Bradyrhizobium declined significantly with higher fire severity, whereas Arthrobacter exhibited a notable increase. Additionally, soil environmental factors such as available phosphorus (AP), dissolved organic carbon (DOC), C/N ratio, and C/P ratio displayed distinct trends: AP content increased with fire severity, while DOC, C/N ratio, and C/P ratio showed decreasing trends. Non-metric Multidimensional Scaling (NMDS) analysis indicated significant differences in soil bacterial community structures across fire intensities. Diversity analysis demonstrated that Shannon and Simpson indices exhibited regular fluctuations correlated with fire severity and were significantly associated with soil C/N ratios. Functional predictions revealed a significant increase in nitrate reduction-related bacterial functions with fire severity, while nitrogen-fixing bacteria declined markedly. These findings suggest that forest fire severity profoundly influences soil bacterial community structure and function, potentially exerting long-term effects on nutrient cycling and ecosystem recovery in forest ecosystems. Full article

The Anaerobic–Swing Aerobic–Anoxic–Oxic (ASAO) process was developed to tackle problems such as temperature sensitivity during the Anaerobic–Oxic–Anoxic (AOA) process. By introducing a swing zone (S zone) with adjustable dissolved oxygen (DO), during the 112-day experimentation period, the ASAO system achieved removal rates of 88.18% for total inorganic nitrogen (TIN), 78.23% for total phosphorus (TP), and 99.78% for ammonia nitrogen. Intermittent aeration effectively suppressed nitrite-oxidizing bacteria (NOB), and the chemical oxygen demand (COD) removal rate exceeded 90%, with 60% being transformed into internal carbon sources like polyhydroxyalkanoates (PHAs) and glycogen (Gly). The key functional microorganisms encompassed Dechloromonas (denitrifying phosphorus-accumulating bacteria), Candidatus Competibacter, and Thauera, which facilitated simultaneous nitrification–denitrification (SND) and anaerobic ammonium oxidation (ANAMMOX). The enrichment of Candidatus Brocadia further enhanced the ANAMMOX activity. The flexibility of DO control in the swing zone optimized microbial activity and mitigated temperature dependence, thereby verifying the efficacy of the ASAO process in enhancing the removal rates of nutrients and COD in low-C/N wastewater. The intermittent aeration strategy and the continuous low-dissolved-oxygen (DO) operating conditions inhibited the activity of nitrite-oxidizing bacteria (NOB) and accomplished the elimination of NOB. Full article

Constructed wetlands play a critical role in mitigating aquaculture wastewater pollution. However, the comprehensive treatment performance of aquatic plants and microorganisms under various water treatment processes remains insufficiently understood. Here, a multi-stage surface flow constructed wetland (SFCW) comprising four different aquatic plant species, along with aeration and biofiltration membrane technologies, was investigated to explore the combined effects of aquatic plants and epiphytic biofilms on wastewater removal efficiency across different vegetation periods and treatment processes. The results demonstrated that the total removal efficiency consistently exceeded 60% in both vegetation periods, effectively intercepting a range of pollutants present in aquaculture wastewater. Changes in the vegetation period influenced the performance of the SFCW, with the system’s ability to treat total nitrogen becoming more stable over time. The removal efficiency of the treatment pond planted with submerged plants was highest in July, while the pond planted with emergent plants showed an increased removal rate in November. The aeration pond played a significant role in enhancing dissolved oxygen levels, thereby improving phosphorus removal in July and nitrogen removal in November. Additionally, the α-diversity of epiphytic bacteria in the aeration and biofiltration ponds was significantly higher compared to other ponds. In terms of bacterial composition, the abundance of Firmicutes was notably higher in July, whereas Nitrospirota and Acidobacteriota exhibited a significant increase in November. Furthermore, the functional genes associated with sulfur metabolism, nitrogen fixation, and oxidative phosphorylation displayed significant temporal variations in the aeration pond, highlighting that both growth period changes and treatment processes influence the expression of functional genes within biofilms. Our findings suggest that the integration of water treatment processes in SFCWs enhances the synergistic effects between aquatic plants and microorganisms, helping to mitigate the adverse impacts of vegetation period changes and ensuring stable and efficient wastewater treatment performance. Full article

Phosphorus (P) is an essential nutrient for rice growth, and the presence of phosphate-solubilizing bacteria (PSB) is an effective means to increase soil P content. However, the direct application of PSB may have minimal significance due to their low survival in soil. Biochar serves as a carrier that enhances microbial survival, and its porous structure and surface characteristics ensure the adsorption of Bacillus megaterium. Inoculating rice husk biochar-immobilized with Bacillus megaterium (BMB) resulted in dissolved inorganic and organic P levels of 39.55 and 31.97 mL L⁻¹, respectively. Subsequently, rice pot experiments were conducted to investigate the response of soil microbial P mobilization and P uptake in rice to fertilizer inputs. The organic fertilizer (OF) combined with BMB treatment (MOF) showed the highest soil available phosphorus (AP) at 38 days, with a value of 7.83 mg kg⁻¹, as well as increased the pqqC abundance while decreasing the abundance of phoD bacterial communities compared with the control. Furthermore, the bioavailable P reservoir (H₂O–Pi and NaHCO₃–Pi) in soil was greatly increased through the fertilizer input and microbial turnover, with the highest H₂O–Pi (3.66 mg kg⁻¹) in OF treatment and the highest NaHCO₃–Pi (52.65 mg kg⁻¹) in MOF treatment. Additionally, carbon utilization analysis was applied using the commercial Biolog system, revealing that the MOF treatment significantly increased the utilization of carbohydrates, polymers, and amino acid carbon sources. Moreover, compared to the control, MOF treatment significantly increased the shoot (0.469%) and root P (0.516%) content while promoting root development and thereby supporting rice growth. Our study demonstrates that the MOF treatment displayed higher P levels in both soil and rice plants, providing a theoretical basis for further understanding the role of biochar-based bacterial agents in rice P management. Full article

The environmental persistence of antiviral drugs poses serious safety hazards to aquatic ecosystems through their selective pressure on microorganisms, yet the understanding of antiviral drugs’ impact on microbial community structures remains limited. In this study, surface water samples from Beijing were analyzed for antiviral drug concentrations using UPLC-MS/MS, and microbial community abundance was assessed via 16S amplicon sequencing. Employing these methods, we investigated the mechanisms through which antiviral drugs may exert ecological risks via microbial communities. Our findings reveal that antiviral drugs significantly increase the abundance of Enhydrobacter and Nitrospira microbiota. The concentration of DNA polymerase inhibitor is significantly positively correlated with the abundance of Peredibacter, Enterococcus, Aeromonas, Aquabacterium, Alloprevotella, and Ruminococcus. Antiviral drugs were also found to significantly reduce the abundance of digestive system-related functions in organismal systems, while promoting processes associated with carbohydrate metabolism and influencing the metabolic activity of bacterial communities. Co-occurrence network analysis showed that antiviral drugs disrupt the original key microbial communities, with Bdellovibrio and Candidatus omnitrophus emerging as new key microbial communities, indicating that rare microbial communities can also play an important role in maintaining system stability. Total phosphorus (TP) and dissolved oxygen (DO) were identified as key factors influencing bacterial community shifts. Our findings underscore the potential contribution of wide-scale usage of antiviral drugs to aquatic bacteria, yielding novel perspectives for the sustainable management of urban riverine environments. Full article

The present study investigated developing biological control agents against plant pathogens as an alternative to pesticides. The plant growth-promoting (PGP) and biocontrol potential of bacteria from the Bacillus genus is due to their ability to produce proteolytic and amylolytic enzymes, assist in the solubilization of phosphorus and zinc, and the production of siderophores. Cell culture and cell-free supernatant were used to investigate the antimicrobial activity of different Bacillus strains against the phytopathogenic fungus Fusarium graminearum in vitro. Fusarium graminearum is a fungus that causes plant disease, particularly in cereals like wheat and barley. As a result, significant suppression of the growth and development of this plant pathogen was observed. Plant growth-promoting activity manifested when the bacteria were applied alone and in combination. A single strain and combinations of two, three, and four strains of Bacillus were tested for their antimicrobial effects against Fusarium graminearum. The fluorescence spectroscopy results proved that the combination of Bacillus subtilis, Bacillus circulans, Bacillus megaterium, and Bacillus licheniformis showed the best stimulation of development, expressed as a comparative evaluation of the yield compared to the untreated control variant. The four strains showed their potential application as a biocontrol agent against Fusarium graminearum. The four Bacillus strains also can promote plant growth by affecting nutrition, root structure, and plant health, and they have the capacity to dissolve phosphates and zinc. Full article

Microbial fertilizer is an environment-friendly fertilizer that can effectively improve the microecological environment of soil, playing an important role in the remediation of saline–alkali soil and promoting sustainable agricultural development. In this study, we examined the impact of microbial fertilizer application on saline–alkali field improvement over two years. The results indicated that, compared to NS0 and NS2 (the initial sowing period without microbial fertilizer addition), the soil pH and electrical conductivity (EC) levels significantly decreased by 4.1% and 8.49% and 60.56% and 39.66% for NS1 (after the first harvest) and NS3 (after the second harvest), respectively. Compared to NS0, the concentrations of Na⁺ and Cl⁻, among the eight major ions in the soil, decreased significantly by 87.23% and 80.91% in the second year, while Ca²⁺ increased significantly in NS1 and NS3, being 5.27 times and 2.46 times higher than before sowing. Comparing NS3 to NS0, the sodium adsorption ratio decreased by 87.04%. The activities of soil urease, alkaline phosphatase, and invertase in NS3 increased significantly by 90.18%, 45.67%, and 82.31% compared to those in NS0. In contrast, the activity of catalase decreased by 2.79% (p < 0.05). Alpha diversity analysis demonstrated that the Ace, Chao1, and Sobs indices for both bacteria and fungi were significantly higher at NS3 than before sowing, indicating the highest species richness at this stage. The Shannon index exhibited an ascending trend, and the difference in the Simpson index was not significant. After applying microbial fertilizer in the saline–alkali field, the number of bacterial and fungal operational taxonomic units (OTUs) significantly increased. In the bacteria, the proportion of Proteobacteria rose, while Actinobacteriota exhibited a significant reduction. Among fungi, the proportion of Ascomycota decreased and Basidiomycota increased. Principal component analysis (PCA) revealed distinct separation among treatments, indicating significant differences in microbial communities. Redundancy analysis (RDA) identified that the key physicochemical factors influencing bacterial community structure were available phosphorus (AP), electrical conductivity (EC), and pH, whereas for fungi, they were AP, available potassium (AK), and dissolved organic carbon (DOC). This research presents the effects of microbial fertilizer application on the improvement in a saline–alkali field over two years. It provides a scientific basis for the remediation of the saline–alkali field via microbe-induced changes in soil physicochemical properties, enzyme activity, microbial diversity, and community structure at different periods. Full article

The aim of this research was to analyze the potential of e micro-dictum preparation containing compositions of beneficial microorganisms using this product in surface water reclamation. The experiments were carried out in 2016. The scope of this research included the analysis of the physical and chemical properties of a solid preparation; tests of the microbiological parameters of micro-dictum; an analysis of the spread of microorganisms in the aquatic environment; a study of water quality with the solid preparation; and tests of the formulation in real conditions and its potential in the reclamation of surface waters. Tests on the produced formulation were carried out in the laboratory in containers and under real conditions. Laboratory tests have shown that the analyzed preparation may introduce certain amounts of nitrogen and phosphorus into the water. However, they are not important in the case of water reclamation. Analyses of the micro-dictum preparation showed that the content of lactic acid bacteria in the center of the ball is lower compared to the outer layers. The results describing an increase in the number of lactic acid bacteria correlate with a decrease in pH and oxygen dissolved in the water with the preparation. The tests showed no negative impact on changes in the physical and chemical properties of water at the site of application. Changes in physical parameters were recorded, in particular dissolved oxygen and pH at the bottom, where the greatest microbiological activity occurred. Full article

The Namib Desert is characterized by a number of abiotic stresses, including high temperature, high salinity, osmotic pressure, alkaline pH, and limited water availability. In such environments, dry soils typically exhibit a low water potential, scarce nutrients, and high concentrations of dissolved ions, collectively creating a challenging habitat for microbial life. In this study, 89 bacterial isolates belonging to 20 genera were identified. Bacteria demonstrated significant osmotolerance, with some strains thriving at polyethylene glycol (PEG) concentrations exceeding 20%. Furthermore, these bacteria demonstrated halotolerance, high pH tolerance, and capacity to produce plant growth-promoting (PGP) traits under conditions of osmotic stress. Osmotolerant bacteria exhibited higher proficiency in siderophore production, potassium solubilization, and phosphorus solubilization, all of which are critical for supporting plant growth in nutrient-scarce and stressful environments, such as deserts. However, alginate production was higher in isolates that were less osmotolerant, indicating the potential for a compensatory mechanism in strains that were more sensitive. These findings highlight the complex strategies employed by desert bacteria to survive and support host plants in extreme environments. The present study not only enhances our understanding of microbial adaptations in arid ecosystems, but also provides important information for the development of potential applications for these bacteria in the reclamation of arid land and agricultural practices aimed at improving crop resilience to abiotic stress. Full article

Camelina (Camelina sativa (L.) Crantz) is a valuable source of essential amino acids, especially sulphur-containing ones, which are generally lacking in leguminous crops, thus representing an alternative source of protein for both humans and farm animals. Rhizosphere soil samples from five experimental plots with mono- and mixed cultivations of three camelina cultivars, including two introduced varieties Cs1.Pro (Luna) and Cs2.Pro (Lenka) and one Bulgarian variety Cs3.Pro (local Bulgarian landrace) with variety 666 of vetch (Vicia sativa L.) (Cs3-Vs.Pro) and variety Mir of pea (Pisum sativum L.) (Cs3-Ps.Pro), were collected and analysed. The total DNA was isolated from the rhizosphere soils and the presence of the 16S rRNA gene was confirmed by amplification with the universal primer 16SV34. In the present study, the structure of the soil bacterial community in five different plots (Cs1.S.Pro, Cs2.S.Pro, Cs3.S.Pro, Cs3.Vs.S.Pro, and Cs3.Ps.S.Pro) where camelina was grown alone and by being intercropped with pea and vetch was analysed via a metagenomic approach. The number of observed species was highest in the local genotype of the camelina Cs3 grown alone, followed by soil from the intercropped variants Cs3-Vs and CsS-Ps. The soil bacterial communities differed between the sole cultivation of camelina and that grown with joint cultivation with vetch and peas, indicating that legumes considerably affected the growth and development of beneficial microorganisms by aspects such as nitrogen fixing, levels of nitrifying bacteria, and levels of phosphorus-dissolving bacteria, thus helping to provide better plant nutrition. The α-diversity indicated that bacterial communities in the rhizosphere were higher in soils intercropped with vetch and pea. The optical properties of cereals and legumes were determined by their energy structure, which includes both their occupied and free electronic energy levels and the energy levels of the atomic vibrations of the molecules or the crystal lattice. Full article

To evaluate the effects of filter-feeding fishes on water quality and bacterial community in the rice–crayfish coculture system, four different stocking densities of bighead carp (0, 500, 1000, 1500 ind./200 m²) were set up in rice–crayfish coculture systems. Water samples in the systems were collected biweekly to detect dissolved oxygen (DO), temperature (T), potential of Hydrogen (pH), ammonia nitrogen (NH₄⁺-N), nitrite nitrogen (NO₂⁻-N), nitrate nitrogen (NO₃⁻-N), total nitrogen (TN), total phosphorus (TP), and Chlorophyll-a (Chl-a); the bacterial community in the water was analyzed simultaneously, then the correlation between water quality and microorganisms were studied. The results showed that concentrations of TN, TP, NO₂⁻-N, and NH₄⁺-N decreased while DO and NO₃⁻-N increased along with the breeding process. NO₂⁻-N, NO₃⁻-N, TN, and NH₄⁺-N were important environmental factors affecting the bacterial community structure in water (p < 0.05). Bighead carp stocking had an impact on the diversity, richness, and evenness of the bacterial communities in the systems. The dominant bacteria in the four different carp density groups were Proteobacteria, Actinomycetes, Bacteroidetes, and Cyanobacteria. Bighead carp increased the abundance of Bacteroidea but reduced that of Actinomycetes, Cyanobacteria, and Proteobacteria. The introduction of bighead carp promoted the conversion of nitrogen and phosphorus, reducing the risk of cyanobacterial blooms. Group 1000 ind./200 m² exhibited the best effect on the removal of nitrogen and phosphorus from the water body. Full article

The bacterial communities in rhizosphere soil interact with the roots of plants. This interaction is beneficial for both the bacteria and the plants, which makes it very important to identify the structure of these bacterial communities for plant growth and development. However, the composition characteristics of bacterial communities in rhizosphere soil of 2-year and 5-year Haloxylon ammodendron have not been clearly defined. The purpose of this study was to identify the diverse composition of 2-year and 5-year Haloxylon ammodendron in Turpan, Xinjiang. Thus, rhizosphere soil bacteria were analyzed by isolating, purifying, and identifying the species through high-throughput sequencing technology. The bacterial strains in the rhizosphere soil of Haloxylon ammodendron were isolated with the dilution coating method, resulting in 37 isolated strains. The selective media were used to screen the growth-promoting characteristics of the rhizosphere soil isolates of Haloxylon ammodendron. The results of high-throughput amplification sequencing showed that the rhizosphere bacteria in the 2-year rhizosphere soil belonged to 45 phyla, 109 classes, 288 orders, 451 families, 826 genera, and 404 species, and those in the 5-year rhizosphere soil belonged to 56 phyla, 148 classes, 369 orders, 601 families, 1062 genera, and 671 species. Among them, Firmicutes, Proteobacteria, Actinobacteriota, Bacteroidota, Crenarchaeota, and so on are the dominant bacteria. There were 12206 and 14,053 OTUs in the 2-year-old and 5-year-old rhizosphere soil bacteria, respectively, and 3329 OTUs in the 2-year- and 5-year-old rhizosphere soil, accounting for 16.98% of the total number of OTUs. The results showed that three strains, sg16, sg21, and ss4, had the highest inorganic phosphorus solubility index (1.58). The isolated strain did not have the ability to dissolve organophosphorus and potassium, while the screened strain sg16 had the ability to fix nitrogen. Two strains with a good iron-bearing capacity, Sg9F and Sg1, were screened, among which Sg9F had the highest D/d value and Sg9F had the strongest iron-bearing capacity. The results showed that 37 strains of rhizosphere soil bacteria belonged to six genera. They are Bacillus, Corynebacterium, Phyllobacterium, Lysinibacillus, Sinorhizobium meliloti, and Streptomyces levis. Among them are sg21 (Bacillus sp.), sg1 (Bacillus sp.), sg9F (Streptomyces levis), sg16 (Phyllobacterium phragmitis), and ss4 (Sinorhizobium meliloti). This study provides a particular research basis for the influence of Haloxylon ammodendron rhizosphere bacteria on soil nutrient release and depicts a solution for improving the yield and quality of cistanche deserticola indirectly through isolating, screening, and identifying rhizosphere soil bacteria, including screening strains with growth-promoting functions and analyzing the population structure of rhizosphere bacteria in 2- and 5-year soil in combination with high-throughput sequencing technology. Full article

Extreme precipitation and flooding frequency associated with global climate change are expected to increase worldwide, with major consequences in floodplains and areas susceptible to flooding. The purpose of this review was to examine the effects of flooding events on changes in soil properties and their consequences on agricultural production. Flooding is caused by natural and anthropogenic factors, and their effects can be amplified by interactions between rainfall and catchments. Flooding impacts soil structure and aggregation by altering the resistance of soil to slaking, which occurs when aggregates are not strong enough to withstand internal stresses caused by rapid water uptake. The disruption of soil aggregates can enhance soil erosion and sediment transport during flooding events and contribute to the sedimentation of water bodies and the degradation of aquatic ecosystems. Total precipitation, flood discharge, and total water are the main factors controlling suspended mineral-associated organic matter, dissolved organic matter, and particulate organic matter loads. Studies conducted in paddy rice cultivation show that flooded and reduced conditions neutralize soil pH but changes in pH are reversible upon draining the soil. In flooded soil, changes in nitrogen cycling are linked to decreases in oxygen, the accumulation of ammonium, and the volatilization of ammonia. Ammonium is the primary form of dissolved inorganic nitrogen in sediment porewaters. In floodplains, nitrate removal can be enhanced by high denitrification when intermittent flooding provides the necessary anaerobic conditions. In flooded soils, the reductive dissolution of minerals can release phosphorus (P) into the soil solution. Phosphorus can be mobilized during flood events, leading to increased availability during the first weeks of waterlogging, but this availability generally decreases with time. Rainstorms can promote the subsurface transport of P-enriched soil particles, and colloidal P can account for up to 64% of total P in tile drainage water. Anaerobic microorganisms prevailing in flooded soil utilize alternate electron acceptors, such as nitrate, sulfate, and carbon dioxide, for energy production and organic matter decomposition. Anaerobic metabolism leads to the production of fermentation by-products, such as organic acids, methane, and hydrogen sulfide, influencing soil pH, redox potential, and nutrient availability. Soil enzyme activity and the presence of various microbial groups, including Gram+ and Gram− bacteria and mycorrhizal fungi, are affected by flooding. Waterlogging decreases the activity of β-glucosidase and acid phosphomonoesterase but increases N-acetyl-β-glucosaminidase in soil. Since these enzymes control the hydrolysis of cellulose, phosphomonoesters, and chitin, soil moisture content can impact the direction and magnitude of nutrient release and availability. The supply of oxygen to submerged plants is limited because its diffusion in water is extremely low, and this impacts mitochondrial respiration in flooded plant tissues. Fermentation is the only viable pathway for energy production in flooded plants, which, under prolonged waterlogging conditions, is inefficient and results in plant death. Seed germination is also impaired under flooding stress due to decreased sugar and phytohormone biosynthesis. The sensitivity of different crops to waterlogging varies significantly across growth stages. Mitigation and adaptation strategies, essential to the management of flooding impacts on agriculture, enhance resilience to climate change through improved drainage and water management practices, soil amendments and rehabilitation techniques, best management practices, such as zero tillage and cover crops, and the development of flood-tolerant crop varieties. Technological advances play a crucial role in assessing flooding dynamics and impacts on crop production in agricultural landscapes. This review embarks on a comprehensive journey through existing research to unravel the intricate interplay between flooding events, agricultural soil, crop production, and the environment. We also synthesize available knowledge to address critical gaps in understanding, identify methodological challenges, and propose future research directions. Full article

Root-knot nematodes are the major diseases in protected cultivation around the world. Bio-organic fertilizer has become a research hotspot, with a variety of microorganisms that control various vegetable soil-borne diseases. This study screened nematocidal microorganisms from fresh vermicompost, explored the inhibitory substances produced by biocontrol agents, and evaluated their potential biocontrol ability in the pot and field under greenhouse conditions. The highly effective antagonistic microbes of Meloidogyne incognita (M. incognita) were screened. Strains YL1 and YL31 were identified as Peribacillus frigoritolerans, and strain YL6 was identified as Lysinibacillus fusiformis. The three strains all produced chitinase and protease, which prevented the normal development of eggs and the second-stage juveniles (J2) by destroying their appearance. The three strains all improved potassium-dissolving ability, and the strains YL1 and YL6 also enhanced phosphorus-dissolving ability. Pot experiments showed that tomato root knots were reduced, and plant growth improved. Field tests showed that the root-knot index and nematode population were reduced significantly, and cucumber growth and yield were enhanced. Strain YL1 had the best control effect with 70.6%, and the yield increased by 14.9% compared with the control. Overall, this study showed the ability of antagonistic bacteria YL1, YL6, and YL31 to control root-knot nematodes, and these antagonistic bacteria could be developed as biocontrol agents for sustainable agriculture. Full article