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Keywords = nitrogen addition

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23 pages, 995 KB  
Article
Hydrochar as a Modulator of Soil Microbial Activity and Soil Biochemical Processes
by Francisco J. Moreno-Racero, Marta Velasco-Molina, Rafael López-Núñez and Heike Knicker
Agronomy 2026, 16(9), 917; https://doi.org/10.3390/agronomy16090917 (registering DOI) - 30 Apr 2026
Abstract
Hydrochar has emerged as a promising carbonaceous amendment to enhance soil quality, yet its short-term effects on soil carbon (C) and nitrogen (N) dynamics and microbial functioning remain poorly understood. Here, a 77-day greenhouse pot experiment was conducted using a Cambisol cultivated with [...] Read more.
Hydrochar has emerged as a promising carbonaceous amendment to enhance soil quality, yet its short-term effects on soil carbon (C) and nitrogen (N) dynamics and microbial functioning remain poorly understood. Here, a 77-day greenhouse pot experiment was conducted using a Cambisol cultivated with sunflower (Helianthus annuus L.) under two irrigation regimes simulating well-irrigated (WI) and water-deficit (WD) scenarios. Two doses of chicken-manure-derived hydrochar (3.25 and 6.5 t ha−1, corresponding to 2.35 and 4.69 g kg−1 of dry soil, respectively) and mineral fertilizer (MF) treatments providing equivalent N inputs were evaluated. Hydrochar promoted microbial growth and enhanced enzymatic and respiratory activities despite its low apparent C and nutrient input. After 77 days under WI, the addition of 6.5 t ha−1 hydrochar enhanced the activity of phenol oxidase (POA) and acid phosphomonesterase (AcPA). Concomitantly, the availability of soluble C and N increased, whereas total organic C (TOC) and N decreased relative to the initial values. These responses may suggest enhanced mineralization potentially related to early-stage priming processes. The increase in POA relative to β-glucosidase is in line with a functional shift from a predominant degradation of labile compounds towards an increased oxidation of more complex structures. This interpretation is supported by solid-state 13C NMR data, revealing a higher degradation index of the soil organic matter. Under WD, the overall effects of hydrochar were attenuated or suppressed, particularly those related to C and N dynamics, emphasizing the interactive influence of moisture and amendment dose. Overall, our results show that hydrochar can modulate short-term soil biochemical processes, partly through enhanced microbial responses. Full article
(This article belongs to the Section Soil and Plant Nutrition)
28 pages, 3940 KB  
Article
Optimising Vegetation Buffers for Soil and Water Conservation in Dryland Cropping Systems: A Modelling Framework Integrating Causal and Process-Based Approaches
by Michael Aliyi Ame, Wei Wei and Gadisa Fayera Gemechu
Agriculture 2026, 16(9), 993; https://doi.org/10.3390/agriculture16090993 (registering DOI) - 30 Apr 2026
Abstract
Soil erosion and nutrient loss degrade the soil resource base and water quality in dryland agricultural landscapes, yet optimal design of vegetation buffers for soil conservation under intensifying rainfall remains poorly quantified, particularly for nutrient retention. This study is novel in integrating event-scale [...] Read more.
Soil erosion and nutrient loss degrade the soil resource base and water quality in dryland agricultural landscapes, yet optimal design of vegetation buffers for soil conservation under intensifying rainfall remains poorly quantified, particularly for nutrient retention. This study is novel in integrating event-scale rainfall-simulation experiments, Bayesian hierarchical modelling, Causal Forest analysis, and WEPP simulations to quantify how the sequential addition of biocrusts and grasses to shrub buffers shifts density thresholds for runoff, soil loss, and nutrient export across varying rainfall intensities. Experiments were conducted across a continuous shrub-density gradient (0–11,429 plants ha−1) representing three configurations: shrub monoculture, shrub-biocrust, and shrub-biocrust-grass on agricultural hillslopes of the Chinese Loess Plateau. Runoff, soil loss, and exports of total nitrogen (TN) and total phosphorus (TP) were measured. Results demonstrate three main findings. First, multilayer shrub–biocrust–grass buffers exhibited lower soil loss than monocultures. Posterior estimates indicate reductions from approximately 3.8 t ha−1 at moderate monoculture density to below 1.0 t ha−1 at lower planting densities, with 94% of the highest-density intervals reflecting uncertainty in these estimates. Second, Causal Forest analysis reveals a functional separation of controls: rainfall intensity dominates soil loss (88% importance) and runoff (84%), whereas nutrient retention responds more strongly to buffer structure and density management. Third, WEPP simulations across rainfall intensities (50–180 mm h−1) and slopes (10–30%) identify an optimal multilayer buffer density of 3800–5700 plants ha−1, which delivers robust multifunctional benefits with 50–67% lower planting requirements than conventional high-density monocultures. These findings demonstrate that multilayer vegetation buffers enhance soil retention and reduce nitrogen and phosphorus losses from hillslopes, sustaining the soil resource base and protecting water quality in dryland agricultural landscapes. The integrated modelling framework provides transferable, evidence-based density recommendations for climate-resilient soil conservation in similar dryland regions. Full article
(This article belongs to the Special Issue Soil Management and Interdisciplinary Approaches to Global Challenges)
20 pages, 643 KB  
Article
Lipid-, Protein-, and Environmental Contamination Derived Off-Odor Volatile Compound Formation in Refrigerated Atlantic Salmon (Salmo salar) Fillets and the Role of Rearing Conditions
by Manpreet Kaur, Md Zakir Hossain, Kevin J. Fisher and Sheryl Barringer
Foods 2026, 15(9), 1558; https://doi.org/10.3390/foods15091558 (registering DOI) - 30 Apr 2026
Abstract
Atlantic salmon (Salmo salar) is highly perishable during refrigerated storage due to the formation of off-odor volatile compounds that limit shelf life and consumer acceptance. This study investigated the development of off-odor volatiles in Atlantic salmon fillets during refrigerated storage and [...] Read more.
Atlantic salmon (Salmo salar) is highly perishable during refrigerated storage due to the formation of off-odor volatile compounds that limit shelf life and consumer acceptance. This study investigated the development of off-odor volatiles in Atlantic salmon fillets during refrigerated storage and evaluated how rearing conditions influence storage-induced volatile formation. Salmon reared under warm (20.3 ± 1.95 °C with continuous light) or cool (13.1 ± 0.85 °C with a 12 h light–12 h dark cycle) conditions were harvested, stored at 4 ± 1 °C, and analyzed at 0, 3, 7, 9, and 15 days using selected-ion flow-tube mass spectrometry (SIFT-MS). Refrigerated storage was the primary driver of volatile formation, with lipid-derived aldehydes and alcohols forming early, followed by additional oxidation products as deterioration progressed, and finally, terminal oxidation products. These findings demonstrate distinct temporal pathways of off-odor volatile formation during refrigerated storage, linking early-stage oxidation of polar lipids, mid-stage involvement of neutral lipids, and late-stage accumulation of terminal and microbial products. Protein-derived volatiles exhibited compound-specific behavior, with reactive sulfur- and nitrogen-containing compounds increasing early or mid-storage and microbial metabolites accumulating steadily over time. Environmentally derived off-odor compounds, including geosmin and 2-methylisoborneol, were progressively released during storage as lipid structures degraded. Warm-reared salmon consistently exhibited higher concentrations of lipid- and protein-derived volatiles, indicating greater oxidative and proteolytic susceptibility. Rearing conditions modulate the extent but not the progression of these spoilage mechanisms. This mechanistic understanding provides a basis for targeted strategies to control off-odor volatile compound development and improve refrigerated shelf life and sensory quality of Atlantic salmon. Full article
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24 pages, 8356 KB  
Article
Nitrogen Removal Efficiency and Microbial Response Mechanism of Hordeum vulgare var. coeleste L. Straw as an External Carbon Source Under Different C/N Ratios
by Renxu Wang, Yansong Wang, Yongchen Zong and Xiangyu Chen
Microorganisms 2026, 14(5), 1024; https://doi.org/10.3390/microorganisms14051024 - 30 Apr 2026
Abstract
To address the bottleneck of poor biological nitrogen removal efficiency caused by the extremely low carbon-to-nitrogen (C/N) ratio of domestic sewage in alpine plateau regions, this study used Hordeum vulgare var. coeleste L., a characteristic crop endemic to the Qinghai–Tibet Plateau, as raw [...] Read more.
To address the bottleneck of poor biological nitrogen removal efficiency caused by the extremely low carbon-to-nitrogen (C/N) ratio of domestic sewage in alpine plateau regions, this study used Hordeum vulgare var. coeleste L., a characteristic crop endemic to the Qinghai–Tibet Plateau, as raw material and adopted pretreated highland barley straw as an external carbon source. Three parallel experiments were carried out using the anaerobic–aerobic–anoxic sequencing batch reactor (AOA-SBR) process to investigate the nitrogen removal performance and functional succession of the microbial community in the AOA-SBR system under three C/N ratio ranges: 5~7, 7~9, and 9~11. The results showed that the addition of an external carbon source significantly improved nitrogen removal efficiency. The optimal C/N ratio range for nitrogen removal in this study was determined to be 7~9. A weakly alkaline environment was conducive to denitrification. The fermentation broth prepared by alkali pretreatment contained a large amount of readily biodegradable organic matter with low toxicity, and achieved excellent nitrogen removal performance, helping to realize cost reduction and efficiency improvement in wastewater treatment. At the optimal C/N ratio of 7~9, the average removal efficiencies of ammonia nitrogen (NH4+-N) and total nitrogen (TN) reached 94.46% and 61.32%, respectively, which were significantly improved compared with the blank control group without external carbon addition. During the experimental period, no obvious changes were observed in microbial abundance at the phylum level, whereas the community structure at the genus level responded significantly to the addition of a straw carbon source. Among them, genera with specific degradation capabilities for straw hydrolysates, such as norank_f__Chitinophagaceae and unclassified_f__Comamonadaceae, were highly sensitive to variations in the C/N ratio. These genera could partially replace the nitrification and denitrification functions of other microorganisms and played a key role in the nitrogen removal process. In contrast, Thauera, a typical conventional heterotrophic denitrifier, showed no significant response to changes in the C/N ratio, indicating that the straw-based external carbon source mainly affected microbial genera with specific hydrolysate-degrading functions. Full article
(This article belongs to the Special Issue Advances in Genomics and Ecology of Environmental Microorganisms)
23 pages, 5137 KB  
Article
Extraction of Soil-Based Fungal Urease and Its Application for Bio-Cementing Sands with Subtle Permeability Reduction
by Liza Asif, Yesra Arshad, Jahanzaib Israr and Gang Zhang
Processes 2026, 14(9), 1454; https://doi.org/10.3390/pr14091454 - 30 Apr 2026
Abstract
In this study, multiple samples were collected from different urea-fertilized agricultural lands, and their fungal strains were isolated using the tenfold serial dilution method on potato dextrose agar plates. In total, 21 strains were identified as urease-positive through primary screening on Christensen medium. [...] Read more.
In this study, multiple samples were collected from different urea-fertilized agricultural lands, and their fungal strains were isolated using the tenfold serial dilution method on potato dextrose agar plates. In total, 21 strains were identified as urease-positive through primary screening on Christensen medium. Secondary screening of selected fungal isolates conducted through submerged fermentation could then identify the fungal strain 10−5 S11 brown as the most effective urease producer that exhibited maximum urease activity (682 U/mL/min). It was identified by scotch tape microscopy for morphological characterization and subsequently confirmed through 18S rRNA sequencing as Aspergillus terreus. Further, optimization of fermentation conditions showed that M9 medium containing 1.5% urea as a nitrogen source at pH 5.5, in addition to 3% sucrose as a carbon source, 4% inoculum size, and 7 days of incubation at 30 °C, produced the best fermentation and enhanced the urease activity from 682 U/mL/min to 1050 U/mL/min. Subsequently, the optimized urease enzyme was mixed with clean sand to induce carbonate precipitation to enhance its unconfined compressive strength from 22.5 kPa for untreated samples to 154.2 kPa for treated samples after 28 days, with subtle permeability reduction from 4.26 × 10−3 cm/s to 1.7 × 10−3 cm/s. Full article
(This article belongs to the Section Environmental and Green Processes)
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25 pages, 4600 KB  
Article
Graphene Oxide as Valuable Additive for Improving ZnO Electrochemical Properties: Zn/xGO (x = 0, 0.1, and 0.5 wt.%) as Photoelectrocatalysts for Water Splitting and Electrochemical Sensor for Diclofenac
by Ana Nastasić, Katarina Aleksić, Marija Kratovac, Ljiljana Veselinović, Ana Stanković, Marijana Kraljić Roković, Srečo Škapin, Valentin N. Ivanovski, Jelena Belošević-Čavor, Ana Umićević, Ivana Stojković Simatović and Smilja Marković
Processes 2026, 14(9), 1453; https://doi.org/10.3390/pr14091453 - 30 Apr 2026
Abstract
Graphene oxide (GO) was employed as an additive to improve the electrochemical activity of zinc oxide (ZnO) used as both a photoelectrocatalyst for water splitting and an electrochemical sensor for detection of diclofenac. To comprehend the influence of a small amount of GO [...] Read more.
Graphene oxide (GO) was employed as an additive to improve the electrochemical activity of zinc oxide (ZnO) used as both a photoelectrocatalyst for water splitting and an electrochemical sensor for detection of diclofenac. To comprehend the influence of a small amount of GO on the electrochemical activity of ZnO, a series of ZnO/xGO (x = 0, 0.1, and 0.5) particles was synthesized by microwave processing of Zn(OH)2 precipitate in the presence of 0.1 and 0.5 wt.% of previously prepared GO. The phase composition and crystal structure ordering of ZnO/xGO particles were investigated by XRD and Raman spectroscopy. The optical properties were studied by UV–Vis DRS and PL spectroscopy. The particle morphology was inspected by FE–SEM while the textural properties were analyzed by the low-temperature nitrogen adsorption–desorption method. The (photo)electrocatalytic and electrochemical sensing activities were examined on the ZnO/rxGO modified glassy carbon electrodes (GCEs) prepared by in situ reduction of the ZnO/xGO modified GCEs for 120 s. The electro- and photoelectrocatalytic activity of ZnO/rxGO modified GCEs for water splitting was tested in dark conditions and after 60 min under illumination, respectively, employing linear sweep voltammetry in 0.1 M NaOH and 0.1 M H2SO4 as electrolytes. The electrochemical sensing activity of ZnO/rxGO modified GCEs was tested for detection of diclofenac in aqueous solution. The improvement in the electrochemical activity of ZnO was correlated with the added amount of GO, structural defects, and particle morphology. Full article
(This article belongs to the Special Issue Graphene Oxide: From Synthesis to Applications)
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15 pages, 908 KB  
Article
The Influence of Bromoform Dose on In Vitro Rumen Fermentation Characteristics in Rumen Fluid Obtained from Cannulated Steers Fed a Medium-Quality Grass Hay Diet
by Natasha Petrenko, Huey Yi Loh, Julia Baroni Alves, Tyler Thomas, Arturo Rodezno Gomez, Julia T. da Silva, Wendela Wapenaar, Kirsty Bardoul, Genevieve D’Souza and Terry E. Engle
Fermentation 2026, 12(5), 222; https://doi.org/10.3390/fermentation12050222 - 30 Apr 2026
Abstract
This study aimed to evaluate the effect of bromoform (CHBr3) dose on in vitro rumen fermentation and on CHBr3 and dibromomethane (CH2Br2) concentrations in solution and the gas cap. In vitro treatments consisted of CHBr3 [...] Read more.
This study aimed to evaluate the effect of bromoform (CHBr3) dose on in vitro rumen fermentation and on CHBr3 and dibromomethane (CH2Br2) concentrations in solution and the gas cap. In vitro treatments consisted of CHBr3 (DOSE: 0, 1, 10, 100, 1000, 10,000 µg of CHBr3), with five replicates per DOSE at each time-point (TIME: 0, 0.25, 0.5, 1, 2, 3, 4, 5, 6, 12, 24, 48, and 72 h). The 10,000 µg CHBr3 DOSE inhibited fermentation completely and was removed from the dataset. The acetate:propionate ratio, nitrogen, and methane (CH4) produced per gram of DMD decreased as DOSE increased (p = 0.01). As the DOSE increased, CH4 decreased, and H2 increased in a dose-dependent manner (p < 0.01). The CHBr3 concentration dropped below the detection limit within 3 h of incubation. Dibromomethane concentrations for DOSE 1000 and 100 µg of CHBr3 increased in solution and gas cap beginning at 0.25 h and 1 h post incubation and plateaued by hour 3 and 5, respectively (p < 0.01). The addition of CHBr3 alters the molar proportion of volatile fatty acids, decreases CH4, and increases H2 production, and it is dehalogenated to CH2Br2 within 3 h of incubation in an in vitro system. Full article
(This article belongs to the Section Animal and Feed Fermentation)
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13 pages, 857 KB  
Article
Tree Species Effects on Microbial Nutrient Limitation in Afforested Mine Soils Revealed by Enzyme Stoichiometry and Substrate-Induced Respiration
by Anastasiia Kovalova and Marcin Chodak
Forests 2026, 17(5), 543; https://doi.org/10.3390/f17050543 - 29 Apr 2026
Abstract
Microbial nutrient cycling in afforested mine soils may be affected by the plant litter quality. This study investigated how different tree species—Scots pine (Pinus sylvestris), silver birch (Betula pendula), European larch (Larix decidua), and black alder ( [...] Read more.
Microbial nutrient cycling in afforested mine soils may be affected by the plant litter quality. This study investigated how different tree species—Scots pine (Pinus sylvestris), silver birch (Betula pendula), European larch (Larix decidua), and black alder (Alnus glutinosa)—influence microbial carbon (C), nitrogen (N), and phosphorus (P) limitations in reclaimed sandy mine soils. We combined substrate-induced respiration (SIR) and ecoenzymatic stoichiometry (EES) to diagnose these metabolic constraints. The SIR analysis revealed a universal primary limitation by labile C across all tree species, with glucose addition stimulating respiration by 271%–333%, regardless of the soil organic carbon content. However, EES revealed distinct secondary nutrient constraints driven by species-specific litter quality. Alder stands exhibited severe P limitation, likely due to high P demand for symbiotic N-fixation and intense competition for P between trees and microbes. In contrast, birch stands showed stoichiometric homeostasis and a slight N deficiency. Coniferous species exhibited P limitation and low enzymatic activity, indicating a strategy focused on intensive nutrient acquisition under low-energy conditions associated with recalcitrant needle litter. These findings demonstrate that while energy limitation is a universal constraint in mine soils, tree species determine the nature and intensity of secondary nutrient limitations due to differences in litter stoichiometry. Full article
(This article belongs to the Special Issue The Role of Soil Fauna and Microbial Communities in Forests)
17 pages, 1436 KB  
Article
Duration of Poplar–Aralia elata Intercropping Alters Soil Nutrients and Microbial Communities in Northeast China
by Shulin Chen, Weixi Zhang, Hengming Zhang, Lulan Miao, Zhongyi Pang, Yanhui Peng, Wenxu Zhu, Keye Zhu, Changjun Ding and Rusheng Peng
Forests 2026, 17(5), 541; https://doi.org/10.3390/f17050541 - 29 Apr 2026
Abstract
Monoculture plantations often face challenges of soil degradation and declining ecosystem services. Intercropping is beneficial to improving soil quality; however, the long-term effects of intercropping woody plants with medicinal herbs on soil ecosystems remain unclear. This study aimed to investigate the temporal effects [...] Read more.
Monoculture plantations often face challenges of soil degradation and declining ecosystem services. Intercropping is beneficial to improving soil quality; however, the long-term effects of intercropping woody plants with medicinal herbs on soil ecosystems remain unclear. This study aimed to investigate the temporal effects of different durations of poplar intercropping with Aralia elata on soil physicochemical properties, enzyme activities, and soil microbial community structure. Soil samples were collected from the 0–20 cm soil layer, with composite samples obtained by mixing four soil cores per plot. We determined soil physicochemical properties, including pH, total carbon (TC), total nitrogen (TN), and total phosphorus (TP); soil enzyme activities, including invertase, urease, phosphatase, and β-N-acetylglucosaminidase (NAG); and soil microbial community structure using high-throughput sequencing of the bacterial 16S rRNA gene and fungal ITS region. Intercropping significantly affected soil chemical properties and enzyme activities in poplar plantations. Compared with the monoculture control (Y), TN (p < 0.01) and TC (p < 0.01) contents increased significantly in the 3- and 7-year intercropping treatments. The activity of β-N-acetylglucosaminidase (NAG) was enhanced following poplar–Aralia elata intercropping. In addition, intercropping significantly changed the composition and structure of soil microbial communities. In summary, introducing Aralia elata into poplar plantations can effectively improve soil fertility and reshape soil microbial community structure. This positive effect is time-dependent and becomes more significant with a 7-year intercropping duration. Poplar–Aralia elata intercropping represents a feasible management strategy to enhance ecological sustainability and soil health in plantation ecosystems of Northeast China. Full article
18 pages, 2807 KB  
Article
Multi-Dimensional Assessment Approach to Assess Pesticide Manufacturing Industry Wastewater Toxicity
by Deling Fan, Jian Wang, Lili Shi, Lei Wang and Zheng Fang
Biology 2026, 15(9), 700; https://doi.org/10.3390/biology15090700 - 29 Apr 2026
Abstract
Pesticide manufacturing industry wastewater is a complex mixture of potentially harmful components. If not properly treated, discharged effluents may pose serious risks to environment and organisms. In this study, influent and effluent wastewater samples from a pesticide factory were comprehensively non-screened by liquid [...] Read more.
Pesticide manufacturing industry wastewater is a complex mixture of potentially harmful components. If not properly treated, discharged effluents may pose serious risks to environment and organisms. In this study, influent and effluent wastewater samples from a pesticide factory were comprehensively non-screened by liquid chromatography high-resolution mass spectrometry, coupled with zebrafish embryo toxicity testing to assess whole effluent toxicity. A total of eight chemical groups were identified, including pesticides, antibiotics, nitrogen compounds, ketones, esters, amines and derivatives, other drugs, and other organic compounds. While wastewater treatment processes reduced most of the analyzed groups of compounds, compounds (e.g., 2-aminophenol, N-Nitrosodipropylamine, and carbamazepine) increased during the treatments. The influent samples were more toxic to zebrafish than the effluent samples in terms of lethality, teratogenic effects, developmental impacts, locomotor behavior, and neurotoxicity. The results showed that locomotor behavior was the most sensitive phenotypic toxicity endpoint, with significantly higher sensitivity than traditional acute lethal or teratogenic endpoints. Through a multi-dimensional assessment approach combining chemical screening, literature-based, risk ranking, and targeted quantification, we identified three predominant pesticide residues in the wastewater samples (both influents and effluents): hexaconazole, fenobucarb and isoprocarb. All three compounds exhibited additive or synergistic toxicity in zebrafish embryos. Exposure to ≥0.08% influent or ≥2% effluent increased inflammation (interleukin-1 beta, IL-1β), oxidative stress (copper/zinc superoxide dismutase, Cu/Zn-Sod), apoptosis (tumor protein p53, p53), and significantly impaired neurodevelopment in zebrafish larvae by altering the expression of sonic hedgehog a (shha), synapsin IIa (syn2a), and glial fibrillary acidic protein (gfap). This study suggests the necessity of incorporating non-apical endpoint (locomotor behavior) into whole effluent toxicity test, as this approach is essential for reducing the environmental risks posed by pesticide factory wastewater. Full article
(This article belongs to the Special Issue Advances in Ecotoxicology and Environmental Toxicology)
16 pages, 2319 KB  
Article
Managing Nutrient and Pathogen Leaching: Impacts of Slurry pH Adjustment on Sandy Soil
by Stamatis Chrysanthopoulos, João Coutinho, Mariana Mota, Ana Carla Silva, Luisa Brito and David Fangueiro
Agriculture 2026, 16(9), 973; https://doi.org/10.3390/agriculture16090973 - 29 Apr 2026
Abstract
This study aimed to evaluate the leaching of nutrients and pathogens following the surface application of pH-modified slurry on sandy soil. Three slurry pH modification strategies—mineral and biological acidification (pH 5) and alkalinization (pH 9.5)—were tested using mineral acids or bases, paper-industry by-products, [...] Read more.
This study aimed to evaluate the leaching of nutrients and pathogens following the surface application of pH-modified slurry on sandy soil. Three slurry pH modification strategies—mineral and biological acidification (pH 5) and alkalinization (pH 9.5)—were tested using mineral acids or bases, paper-industry by-products, or combinations of additives. We hypothesized that: (i) acidification increases nitrogen (N) and phosphorus (P) leaching through nutrient solubilization, and (ii) effective sanitization reduces the risk of pathogen leaching. A 24-day column leaching experiment was conducted with slurry applied at 240 kg N ha−1 and four weekly irrigation events. Results indicated that nitrate (NO3) leaching accounted for less than 15% of the total nitrogen applied; however, acidified slurry significantly increased ammonium (NH4+) leaching by 72%. The combination of H2SO4 with sucrose reduced NH4+ and NO3 leaching, although P leaching exceeded 35% of the total P applied. Sulphur (S) concentrations in leachates ranged from 42.3 to 112.8 mg S kg−1 soil, particularly in treatments involving H2SO4 or SO42−—rich additives such as spent acid. Faecal coliform leaching declined throughout the study, with acidified slurry consistently maintaining levels below the threshold for irrigation water (<100 MPN/100 mL). Regarding nutrient leaching, pH-modified slurry may present a higher risk of N, P and S leaching compared to untreated slurry, which could also be interpreted as an increase in plant nutrient availability. Full article
(This article belongs to the Special Issue Circular Economy in Livestock Production)
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20 pages, 2508 KB  
Article
Added Value of MBR and Ozonation for Advanced Wastewater Treatment Based on Antibiotic Resistance Genes and Bacteroidales as a Marker for Fecal Gene Load
by Andreas Nocker, Grit Hofmann, Maximilian Werner, Jens Schoth, Christopher Breidenbach, Sabine Kuchler, Lina Bachert da Cunha, Gerhard Schertzinger, Hannes Schlottmann, Issa Nafo and Stefan Panglisch
Water 2026, 18(9), 1059; https://doi.org/10.3390/w18091059 - 29 Apr 2026
Abstract
Large wastewater treatment plants (WWTP) are increasingly supplemented with quaternary treatment. Classical monitoring hereby relies mostly on the measurement of oxygen demand, micropollutants and the nutrients phosphorus and nitrogen. From a microbiological perspective, relevant parameters to assess treatment performance include the removal efficacies [...] Read more.
Large wastewater treatment plants (WWTP) are increasingly supplemented with quaternary treatment. Classical monitoring hereby relies mostly on the measurement of oxygen demand, micropollutants and the nutrients phosphorus and nitrogen. From a microbiological perspective, relevant parameters to assess treatment performance include the removal efficacies of the fecal gene load as a proxy of pathogenic risk, antibiotic resistance genes and the bacterial regrowth potential. For this purpose, a combination of flow cytometry and quantitative PCR, together with a viability assessment, was applied to characterize a full-scale pilot plant. The pilot plant comprised conventional treatment and MBR and ozonation for advanced treatment. The assessment of fecal gene load was based on the quantification of Bacteroidales of human origin, as these obligate anaerobic bacteria cannot replicate within wastewater treatment plants. Whereas conventional treatment resulted in only moderate removal of these parameters, quaternary treatment typically led to a much stronger decrease. MBR treatment contributed most strongly to the removal with an appr. 6 log reduction compared to the primary clarification effluent, corroborating its microbiological merit for wastewater treatment. In addition to removing microorganisms and their genetic content, data also suggested a 95% reduction in extracellular DNA. Ozonation further enhanced microbiological removal. From an analytical perspective, the study shows the added value of using a long amplicon qPCR approach together with sample treatment with a viability dye to minimize false-positive signals and to avoid underestimation of treatment performance. The chosen diagnostic approach shows promise in assessing the microbiological treatment efficacy of WWTPs and as a basis to decide on the microbiological necessity of treatment upgrades. Full article
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15 pages, 4197 KB  
Review
Plant-Based Proteins and Renal Protection in Acute Kidney Injury: Nutritional and Metabolic Perspectives
by Diana Zarantonello, Sergio Lassola, Andrea Carta, Omar Fathalli and Silvia De Rosa
Nutrients 2026, 18(9), 1395; https://doi.org/10.3390/nu18091395 - 29 Apr 2026
Abstract
Acute kidney injury (AKI) is a frequent complication in critically ill patients and is associated with high morbidity, mortality, and an increased risk of progression to chronic kidney disease (CKD). In this context, nutritional management represents a key component of supportive therapy, as [...] Read more.
Acute kidney injury (AKI) is a frequent complication in critically ill patients and is associated with high morbidity, mortality, and an increased risk of progression to chronic kidney disease (CKD). In this context, nutritional management represents a key component of supportive therapy, as AKI is commonly characterized by hypercatabolism, negative nitrogen balance, and protein-energy wasting. Current nutritional strategies primarily focus on the quantity of protein intake required to compensate for catabolic losses, particularly in patients undergoing renal replacement therapy (RRT). However, growing evidence suggests that the quality and metabolic effects of dietary protein sources may also influence renal physiology and recovery. Plant-based proteins have recently gained attention as a potentially advantageous nutritional strategy in kidney disease. Compared with animal-derived proteins, plant-based proteins are associated with a lower dietary acid load, reduced production of gut-derived uremic toxins, and beneficial effects on the intestinal microbiota. In addition, their amino acid profile may modulate oxidative stress, inflammatory pathways, and renal hemodynamics. These characteristics may contribute to a more favorable metabolic environment in patients with AKI, potentially supporting renal recovery and reducing the risk of AKI-to-CKD transition. This review examines the pathophysiological mechanisms linking protein metabolism, renal injury, and nutritional support in AKI. Particular attention is given to the role of plant-based proteins, their amino acid composition, and their potential nephroprotective effects. Understanding the interaction between dietary protein sources, metabolic pathways, and the gut–kidney axis may help guide future nutritional strategies aimed at improving outcomes in critically ill patients with AKI. Full article
(This article belongs to the Special Issue Nutritional Management in Intensive Care)
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15 pages, 1126 KB  
Article
How Microplastics Influence the Microbial Communities of Periphytic Biofilm Between the Paddy Soil and Water Interface: A Microcosm Study
by Yufei Dong, Congying Han, Shuai Pan, Xinli Lin, Lingyuan Chen, Yinlong Zhang and Haiying Lu
Agriculture 2026, 16(9), 968; https://doi.org/10.3390/agriculture16090968 - 28 Apr 2026
Abstract
Microplastics (MPs) are emerging pollutants that affect soil–microbe interactions in paddy ecosystems. Periphytic biofilms (PBs) are complex microbial consortia that ubiquitously distribute at the soil–water interface of paddy ecosystems, playing essential roles in nutrient cycling and pollutant migration. However, whether MPs affect the [...] Read more.
Microplastics (MPs) are emerging pollutants that affect soil–microbe interactions in paddy ecosystems. Periphytic biofilms (PBs) are complex microbial consortia that ubiquitously distribute at the soil–water interface of paddy ecosystems, playing essential roles in nutrient cycling and pollutant migration. However, whether MPs affect the community composition of PBs remains largely unknown. This microcosm study investigated the effects of three types of MPs (polyacrylonitrile, PAN; polyethylene, PE; and polyethylene terephthalate, PET) on the community characteristics of PBs via high-throughput sequencing (16S/18S rRNA) technology. Results showed that the addition of all MPs significantly increased the biomass and chlorophyll-a content of PBs, with PAN inducing the maximum increase (by 331.9% and 128.6%). However, all MPs had no significant effect on the PB α-diversity of bacterial and eukaryotic communities (p > 0.05). As for PB composition, PAN and PET increased the relative abundance of Cyanobacteria, Proteobacteria and Holozoa, PE increased that of Cyanobacteria, Bacteroidota and Blastocladiomycota, and all MPs decreased the relative abundance of Chloroflexi, Actinobacteriota and Basidiomycota. Furthermore, PET decreased the predicted functional potential of natural polymer degradation (cellulolysis, ligninolysis, xylanolysis, ureolysis), nitrogen fixation and nitrate ammonification, while PE increased predicted potential for plastic degradation, nitrate reduction and denitrification. Co-occurrence network analysis suggested that the PE network showed higher connectivity and lower modularity, while the PAN network showed higher modularity. This study advances our understanding of soil MPs–microbe interactions under high-concentration conditions. It also suggests that PB community characteristics may serve as potential bioindicators for soil MP pollution. Full article
(This article belongs to the Special Issue Micro- and Nanoplastic Pollution in Agricultural Soils)
17 pages, 3432 KB  
Article
Predicting Algal Bloom Dynamics in Drinking Water Reservoirs Using High-Frequency In Situ Data and Machine Learning
by Jiangbin Wang, Min Jiang, Shuhua Wang, Zixin Wang, Yikun Cui, Ying Feng, Shanshan Zhang, Mingjiang Cai and Yanping Zhong
Toxins 2026, 18(5), 203; https://doi.org/10.3390/toxins18050203 - 28 Apr 2026
Abstract
Algal proliferation in subtropical drinking water reservoirs has become increasingly severe, and developing a reliable prediction for algal abundance through high-frequency in situ data is essential for early risk warning and effective management. This study analyzed the interannual variations in algal abundance in [...] Read more.
Algal proliferation in subtropical drinking water reservoirs has become increasingly severe, and developing a reliable prediction for algal abundance through high-frequency in situ data is essential for early risk warning and effective management. This study analyzed the interannual variations in algal abundance in the Shanmei (SM) Reservoir, located in Quanzhou City, Fujian Province, China, based on the high-frequency data between 2020 and 2025, and forecasted algal abundance 24 h ahead via the optimized Transformer model. Results revealed that the SM reservoir exhibited seasonal variability in environmental factors, with persistently elevated pH during spring and summer, ranging from 7.12 to 9.66, and relatively high total nitrogen concentrations, ranging from 1.17 to 2.28 mg/L. Overall, algal abundance increased throughout the study period, and the annual average algal abundance in 2025 was 8.18 × 106 cells/L, which was twice that in 2021. Model comparisons revealed that the optimized Transformer model exhibited the highest performance in terms of R2 = 0.88 when predicting the next hour using 12 days of data. Feature importance analysis based on SHapley Additive exPlanations (SHAPs) revealed that the predictions of algal dynamics were primarily influenced by previous-hours algal abundance, permanganate index, dissolved oxygen, air temperature, wind speed, and pH. This study revealed that the optimized independent learning model with integrated multi-scale features can significantly enhance the predictive performance of algal dynamics, offering a technical basis for early warning of algal blooms and refined reservoir management. Full article
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