Search Results (65)

Soil nematodes are essential components of the soil food web and are widely recognised as key bioindicators of soil health because of their sensitivity to environmental factors and disturbance. In agriculture, many studies have documented the effects of fertilisation on nematode communities and explored their role in nutrient cycling. Despite this, a key gap in knowledge still exists regarding how fertilisation-induced changes in nematode communities modify their role in nutrient cycling. We reviewed the literature on the mechanisms by which nematodes contribute to nutrient cycling and on how organic, inorganic, and recycling-derived fertilisers (RDFs) impact nematode communities. The literature revealed that the type of organic matter and its C:N ratio are key factors shaping nematode communities in organically fertilised soils. In contrast, soil acidification and ammonium suppression have a greater influence in inorganically fertilised soils. The key sources of variability across studies include differences in the amount of fertiliser applied, the duration of the fertiliser use, management practices, and context-specific factors, all of which led to differences in how nematode communities respond to both fertilisation regimes. The influence of RDFs on nematode communities is largely determined by the fertiliser’s origin and its chemical composition. While fertilisation-induced changes in nematode communities affect their role in nutrient cycling, oversimplifying experiments makes it difficult to understand nematodes’ functions in these processes. The challenges and knowledge gaps for further research to understand the effects of fertilisation on soil nematodes and their impact on nutrient cycling have been highlighted in this review to inform sustainable agricultural practices. Full article

This study investigates the impact of golden moles (Amblysomus sp.) on the abundance, diversity, and community structure of nematodes in kweek grass (Cynodon dactylon) within the Sovenga Hills of Limpopo Province, South Africa. Eight sites were sampled: four with active moles (sites: M1–M4), and four without (sites: T1–T4). Eighty soil samples were collected, and nematodes were extracted. A total of 23 nematode genera were identified, including 3 plant-parasitic and 20 free-living genera. The frequency of occurrence (FO) data showed that Aphelenchus sp. and Acrobeles sp. were the most prevalent nematodes, each occurring in 87.5% of the samples. In contrast, Eucephalobus sp., Tripylina sp., Discolaimus sp., and Tylenchus sp. had the lowest FO, appearing in only 12.5% of samples. The diversity indices (the Shannon index, the maturity index, and the plant-parasitic index) showed significant differences between the two environments. The Shannon index (H′) and maturity index were the most effective indicators of ecosystem disturbance. The lowest H′ was found at T4 (1.7 ± 0.2), compared with a higher value at M1 (2.4 ± 0.1). The principal component analysis (PCA) results revealed a positive correlation between Ditylenchus and the clay in the soil. In addition, Cervidellus was associated with soil pH. Network analysis revealed increased complexity in the nematode community structure at mole-affected sites. These findings suggest that mole activity alters soil properties and indirectly affects nematode diversity and trophic structure. Full article

Applying organic amendments enhances agroecosystem multifunctionality (EMF), yet its mechanisms via soil food-web energetics remain unclear. A field experiment was conducted on China’s Loess Plateau in a winter wheat system, comparing mineral fertilizer with straw, biochar, and liquid organic fertilizer to assess their impacts on nematode communities and EMF (plant performance and carbon, nitrogen, phosphorus cycling). Using high-throughput sequencing and energy flux modeling, we found that straw and biochar enhanced nematode diversity and co-occurrence network complexity, while liquid organic fertilizer reduced network complexity. Straw balanced fungal- and bacterial-driven energy pathways, enhancing energy flow uniformity (1.05) and EMF. However, its high C:N ratio requires mineral fertilizers to alleviate nitrogen limitations, ensuring stable bacterial energy fluxes and preventing functional trade-offs. Biochar elevated total energy flux but prioritized bacterial- and herbivore-driven pathways, reducing energy flow uniformity (0.76) and functional balance. Liquid organic fertilizer favored omnivores-predators, destabilizing lower trophic functions with minimal functional gains. Amendment properties (C:N ratio, pH) shaped nematode-mediated energy distribution, linking biodiversity to multifunctionality. Overall, straw is optimal for supporting EMF when combined with mineral fertilizers, while biochar and liquid fertilizer require tailored management to mitigate functional trade-offs. These findings advance sustainable strategies for dryland agroecosystems in the Loess Plateau region and similar environments. Full article

Considerable losses are inflicted by plant-parasitic nematodes (PPNs) due to their obligate parasitism; serious damage occurs in many susceptible crops, and the parasites have a broad distribution worldwide. As most PPNs have a subterranean nature, the complexity of soils in the plant rhizosphere and the structures and functions of the soil food webs necessitate a grasp of the relevant biotic/abiotic factors in order to ensure their effective control. Such factors frequently lead to the inconsistent performance and untapped activity of applied bionematicides, hindering efforts to develop reliable ones. Research efforts that take these factors into account to back the usage of these bionematicides by combining the disease-suppressive activities of two or more agricultural inputs are highlighted herein. These combinations should be designed to boost useful colonization in the rhizosphere, persistent expression of desirable traits under a wide range of soil settings, and/or antagonism to a larger number of plant pests/pathogens relative to individual applications. Relevant ecological/biological bases with specific settings for effective PPN management are exemplified. Determining the relative sensitivity or incompatibility of some biologicals entails studying their combinations and reactions. Such studies, as suggested herein, should be conducted on a case-by-case basis to avoid unsatisfactory outputs. These studies will enable us to accurately define certain outputs, namely, the synergistic, additive, neutral, and antagonistic interactions among the inputs. In optimizing the efficiencies of these inputs, researchers should consider their multi-functionality and metabolic complementarity. Despite previous research, the market currently lacks these types of safe and effective products. Hence, further explorations of novel integrated pest management plans that boost synergy and coverage to control multiple pathogens/pests on a single crop are required. Also, setting economic incentives and utilizing a standardized regulation that examines the authentic risks of biopesticides are still called for in order to ease cost-effective formulation, registration, farmer awareness, and usage worldwide. On the other hand, tank mixing that ensures legality and avoids physical and chemical agro-input-based incompatibilities can also provide superior merits. The end in view is the unraveling of the complexities of interactions engaged with in applying multiple inputs to develop soundly formulated, safe, and effective pesticides. Sophisticated techniques should be incorporated to overcome such complexities/limitations. These techniques would engage microencapsulation, nanopesticides, volatile organic compounds as signals for soil inhabitants, bioinformatics, and RNA-Seq in pesticide development. Full article

Citrus greening disease (CGD), also known as Huanglongbing in China, is caused by the endophytic bacterium ‘Candidatus Liberibacter asiaticus’ and poses a severe threat to the global citrus industry. The disease affects microbial communities in leaves, stems, roots, and soil. Soil nematodes, which occupy multiple trophic levels, play crucial roles in nutrient cycling, pest regulation, and plant-soil interactions. However, the impact of CGD on soil nematode community structure and energy flow remains unclear. This study examined the effects of different levels of CGD infection on soil nematode communities and energy dynamics. Three infection levels were selected: control (healthy plants with no yellowing symptoms), mild infection (≤50% leaf yellowing), and severe infection (entire canopy affected). The results showed that increasing CGD severity significantly reduced the nematode abundance, community structure index, and total energy flux by 94.2%, 86.7%, and 93.5%, respectively, in the severely infected group. Both mild and severe infections resulted in a higher proportion of bacterivorous nematodes compared to the control. Moreover, herbivorous energy flux was significantly reduced by 99.2% in the severe infection group, suggesting that herbivorous endophytic nematodes are particularly sensitive to CGD. The total energy flux through nematode food web, the energy flux through fungal or herbivorous channels, and the energy flow uniformity were positively correlated with the nematode structure index but negatively correlated with the nematode richness and evenness indices. Furthermore, the reduction in soil resource input (especially total nitrogen and total carbon) caused by CGD was the primary driver of the changes in nematode communities and energy flows. These findings highlight the destructive effects of CGD on soil ecosystems through bottom-up control. The CGD-induced obstruction of photosynthate transport primarily impacts phytophagous organisms and could also influence other trophic levels. To mitigate these effects and ensure healthy citrus production, future research should focus on early detection and effective CGD management strategies. Full article

Tillage, cover crops (CC) and nutrient amendments are regenerative agricultural practices (RAPs) which enhance desirable ecosystem services (DESs), including the beneficial nematode community structure (BNCS), soil organic matter (SOM), pH, and available nitrogen, and the Ferris et al. soil food web (SFW) model relates changes in the BNCS to biophysicochemical conditions generating DESs. However, the SFW model’s power to identify soil health conditions influencing DESs’ outcomes has been limited. We tested how tillage, winter rye CC, and 0, 112, or 224 kg N/ha from inorganic and compost sources affected the DESs after four years of corn production. The SOM and NO₃ was much greater in the no-till than the tilled soil, and the SOM in the 224 kg organic source, compared with the rest of the N rates, was significantly increased. The N recovery was not proportional to what was applied. The variable effects of the RAPs on the DESs suggest either changing or continuing treatments until suitable outcomes are achieved, all without knowing the source(s) of variability. The SFW model revealed primarily resource-limited and structured (Quadrant C) conditions, suggesting that (1) nutrient cycling needs biological activities and (2) the presence of a process-limiting factor may have contributed to the variable results. The impacts of the SFW model as a diagnostic tool are outlined. Full article

The forest swamp ecosystem, as a special wetland ecosystem, is a key link in the material cycle and an important carbon sink in the carbon cycle. The global carbon cycle is of great significance, but the impact of forest swamp succession and soil depth on soil active organic matter and nematode community structure and diversity is unclear. This study used the “space instead of time” method to investigate the succession process of forest swamps from grasslands (WC) and shrubs (WG) to forests (WS) in national nature reserves. The results showed that during the forest succession process, the dominant nematode communities in the WC and WG stages were dominated by the genera Apis and Labroidei, while the dominant genera increased in the WS stage. The total abundance of nematodes increased, and the number of groups was ordered WG > WC > WS. The diversity in soil nematode communities according to Shannon–Wiener (H′), Pielou (J), and Trophic diversity (TD) was WS > WG > WC, which is related to vegetation, soil physical and chemical properties, and microbial community structure. The maturity index (MI) was WG > WS > WC. The soil food web was dominated by bacterial channels and had characteristics in forest metabolic activity and regulation ability. At different soil depths, there were significant differences in the community, with species such as the spiny cushioned blade genus being key. The number and group size of nematodes varied from 0–10 cm > 10–20 cm > 20–30 cm. The relative abundance of feeding nematodes changed with depth, while diversity indices such as H′, J, and TD decreased with depth. Ecological function indices such as MI and PPI showed depth variation patterns, while basic indices (BI) and channel indices (CI) showed significant differences. In terms of soil variables, during the forest succession stage, soil organic carbon (SOC), soluble organic nitrogen (DON), easily oxidizable organic carbon (ROC), microbial biomass carbon (MBC), and microbial biomass nitrogen (MBN) showed a gradually increasing trend with WC-WG-WS, while total nitrogen (TN), soluble organic carbon (DOC), soil temperature (ST), and soil moisture (SM) showed opposite changes. There were significant differences in soil ST, SM, and DON values with succession (p < 0.05). At different soil depths, except for DON and ROC, which increased first and then decrease with depth, the values of other physical and chemical factors and active carbon and nitrogen components at depths of 0–10 cm were higher than those at other depths and decreased with depth. An analysis of variance showed significant differences in MBC and MBN values at different soil depths (p < 0.05), which is of great significance for a deeper understanding of the mechanism of soil nematode community construction and its relationship with the environment. Full article

Agricultural soil environments contain different types of nematodes in all trophic levels that aid in balancing the soil food web. Beneficial free-living nematodes (FLNs) consist of bacterivores, fungivores, predators, and omnivores that help in the mineralization of the soil and the top-down control of harmful plant-parasitic nematodes (PPNs). Annually, USD 125 billion in worldwide crop losses are caused by PPNs, making them a plant pathogen of great concern for growers. Farmers have started to implement the use of cover crops in agricultural systems for the protection and enrichment of soil but research on how different cover crops affect nematode populations is lacking and in demand. This study aims to determine the effects of legume and grass cover crops, Cowpea (Vigna unguiculata) and Pearl Millet (Pennisetum glaucum), as well as their mixture on the abundance and diversity of FLN and PPN populations. Soil samples were collected at the time of cover crop maturity and spinach harvest to analyze nematode communities using both morphological and DNA metabarcoding analysis. The results showed that the application of Cowpea and Pearl Millet as well as their mixture in a spinach agricultural system led to the control of PPNs and proliferation of FLN communities, with each cover crop treatment demonstrating different advantages for the various nematode feeding groups. Soil property analysis did not show a significant difference except for magnesium and total nitrogen levels, which were significantly correlated with nematode community composition. The overall findings of our study indicate that the choice of cover crop implementation by growers for spinach cultivation should be based on specific soil health conditions, which in turn promote soil fertility and a healthy nematode community. Full article

In the last 25 years, nematode parasites of the genus Anisakis have attracted international attention from various socio-economic sectors, with serious concern about the impact of these parasites on seafood quality and safety, and public health (related to both zoonoses and allergy). A knowledge-based understanding of the population structure of Anisakis spp. is useful to provide valuable data about the infection dynamics, host specificity and its ability to adapt to local environments and to climate change by adapting to the food-web structure. This study first aimed to investigate the taxonomic biodiversity of Anisakis spp. collected from commercial fish and cetacean species from the most significant Northeast Atlantic fishing grounds and evaluate the ecological connections of A. simplex and A. pegreffii (L3 and adults) in cetaceans and fish from NW Spain, through the analysis of their genetic diversity and population structure. A total of 1399 Anisakis spp. L3 larvae from six fish species and 475 adults from six cetacean species were identified using the ITS rDNA region as a molecular marker. Molecular identification allowed for the first detection of A. berlandi in European waters parasitizing the long-finned pilot whales Globicephala melas and the first report of A. nascettii and A. zhiphidarum infecting the striped dolphin Stenella coeruleoalba, as well as the identification of A. simplex, A. pegreffii and the hybrid genotype between both species. The analysis of the mitochondrial cytochrome oxidase 2 gene of A. simplex and A. pegreffii, the most prevalent species in FAO area 27, revealed panmictic populations for both species with high haplotype diversity. The predatory–prey relationship involving two major fish species (European hake and blue whiting) and the common dolphin appears to provide an important mechanism for maintaining genetic diversity and structure in major Anisakis species in the NE Atlantic. Full article

Soil biodiversity plays a critical role in supporting multiple ecosystem functions. As some of the most diverse and abundant metazoans on the Earth, soil nematode communities exhibit changes along environmental gradients, but the ways in which the abundance and diversity of nematode communities vary along elevational gradients remain poorly understood. Taking advantage of an investigation on Huangshan Mountain, Southeast China, with elevation ranging from 500 to 1200 m, we assessed the abundance and diversity of soil nematodes, as well as the soil physicochemical properties, across subtropical forest ecosystems. Nematode communities were analyzed at the genus level, and the α-diversity was calculated as the genus richness, while the β-diversity was based on the Bray–Curtis dissimilarity. The results showed that, among the top 20 nematode genera ranked by absolute abundance, most genera, such as Eucephalobus, Prismatolaimus, Filenchus, and Rotylenchulus, reached their peak abundance at the highest elevation (1000 m). Additionally, the abundances of Oriverutus, Tylenchus, Criconema, and Tripyla exhibited a positive correlation with the elevation. Moreover, the abundance and α-diversity of the total nematodes and each trophic group of nematodes increased linearly with the elevation, likely due to increased soil moisture at higher elevation. In contrast, the β-diversity of the total nematodes, bacterivores, and herbivores decreased with increasing elevation, indicating the importance of stochastic processes in shaping community assembly at high altitudes. This pattern suggests that as the elevation increases, the nematode communities become more homogeneous in structure. Taken together, our study’s findings demonstrate the divergent responses of nematodes’ α- and β-diversity to an elevation gradient, highlighting the importance of the soil nematode diversity in maintaining ecosystem functions such as nutrient cycling and food web stability in mountainous regions. These results emphasize the need to incorporate the below-ground biodiversity into conservation strategies, particularly in the face of environmental changes driven by climate and human activities. Full article

The Loess Plateau is one of the most vulnerable areas in the world. Numerous studies have been conducted to investigate alfalfa fields with different planting years. Soil microorganisms and nematodes are vital in ecosystem functionality and nutrient cycling. Therefore, comprehending their response to alfalfa fields with varying years of planting is essential for predicting the direction and trajectory of degradation. Alfalfa fields with different planting years (2 years, 9 years, and 18 years) were used as the research object, and farmland was used as the control (CK). High-throughput sequencing and morphological methods determined the community composition of microorganisms and nematodes. Carbon metabolic footprints, correlation networks, and structural equations were used to study soil microorganisms and nematode interactions. Principal component analysis (PCA) results showed that alfalfa fields with different planting years significantly impacted soil microorganisms and nematode community structures. Planting alfalfa significantly increased the nematode channel ratio (NCR) and Wasilewska index (WI), but significantly reduced the soil nematode PPI/MI and dominance (λ). The correlation network results indicated that, for the 2-year and 18-year treatments, the total number of links and positive links are higher than other treatments. Conversely, the 9-year treatment had fewer positive links and more negative links compared to other treatments. Additionally, the keystone species within each network varied based on the treatment years. Structural equation results show that alfalfa planting years directly impact soil fungal community structure and plant-parasitic nematodes’ carbon metabolism omnivorous-predatory nematodes. Furthermore, the carbon metabolism of omnivorous-predatory nematodes directly influences soil organic carbon fixation. Moreover, as the duration of alfalfa planting increases, the metabolic footprint of plant-parasitic nematodes decreases while that of omnivorous-predatory nematodes rises. Among treatments varying in alfalfa planting durations, the 9-year treatment exhibited the most incredible energy conversion and utilization efficiency within the soil food web, demonstrating the most stable structure. This study reveals optimal alfalfa planting duration for soil ecosystem stability in the Loess Plateau. Future research should explore sustainable crop rotations and alfalfa–soil–climate interactions for improved agricultural management. Full article

A study was conducted in the mountains of Magoebaskloof, Limpopo Province, where oak trees grow along the banks of the Broederstroom River. This study revealed that 22 nematode genera were associated with oak trees (Quercus robur). The most frequently occurring nematodes were Aphelenchus sp. (100%) and Plectus sp. (100%), followed by Helicotylenchus sp. (90%). This study examined the relationship between nematodes and the physicochemical properties of the soil using Pearson correlation. It uncovered that the organic matter content (OMC) had a negative correlation with the number of Panagrolaimus sp. (r = −0.770) and Hemicycliophora sp. (r = −0.674). Conversely, the sand percentage positively correlated (r = 0.695) with the number of Hemicycliophora sp. The clay content of the soil showed a positive correlation (r = 0.617) with the number of Ditylenchus. Soil pH demonstrated a significant negative correlation with Acrobeloides sp. (r = −0.877). The canonical correspondence analysis (CCA) explained 63.3% of the relationship between nematodes and soil physicochemical properties. The CCA results indicated that Ditylenchus exhibited a positive correlation with OMC, while the Panagrolaimus and Hemicycliophora species showed a negative correlation with OMC. The results indicated that none of the soil sample sites were under stress. The soil food web analysis revealed that most soil samples were nutrient-enriched with a low C/N ratio. In conclusion, this study revealed that oak trees harbor a high diversity of plant-parasitic and free-living nematodes. The results suggest that soil nematodes, particularly free-living bacterivores, such as Panagrolaimus, can indicate organic matter content in the soil. Full article

There is increasing adoption of winter cover crops (WCCs) in corn and soybean production in Canada, primarily to reduce erosion and increase soil organic matter content. WCCs have the potential to influence nematode communities by increasing free-living nematodes and decreasing plant-parasitic nematodes or vice versa. However, the mechanism by which WCCs change nematode community assemblages still remains a key question in soil food web ecology. We tested the hypothesis that the long-term use of rye (Secale cereale), barley (Hordeum vulgare) and oat (Avena sativa) as monocultures or mixtures promotes nematode communities and improves overall soil health conditions compared to winter fallow. The results from this study revealed that the use of WCCs generally promoted a higher abundance and diversity of nematode communities, whereas plant parasitic nematodes were the most abundant in winter fallow. Moreover, the mixtures of WCCs had more similar nematode communities compared to rye alone and winter fallow. The structure and enrichment indices were higher with WCCs, indicating higher nutrient cycling and soil suppressiveness, which are signs of healthy soil conditions. Furthermore, WCCs significantly reduced the populations of root lesion nematode Pratylenchus, although their numbers recovered and increased during the main crop stages. Additionally, mixtures of WCCs promoted the highest abundance of the stunt nematode Tylenchorhynchus, whereas winter fallow had a higher abundance of the spiral nematode Helicotylenchus during the fallow period and the main crop stages. The results show that the long-term use of cover crops can have a positive impact on nematode communities and the soil food web, but these changes depend on the type of WCCs and how they are used. Full article

Addressing the imbalance of the livestock–forage–environment system on the Qinghai–Tibet Plateau (QTP), the extensive replacement of natural grasslands with artificial grasslands has been pursued to enhance forage yield and quality. Recognizing their pivotal role in soil ecology, soil nematodes serve as sensitive indicators of the soil ecosystem structure and function. In this context, we embarked on a field investigation aimed at discerning the impact of varying artificial grasslands on soil nematode communities and food webs, with the intent of identifying an optimal forage species through the lens of soil nematode dynamics in the temperate steppe of the QTP. Our findings indicate that artificial grasslands, on the whole, tend to augment the soil nematode diversity—as reflected in the increased Margalef richness—and modify the community structure. Notable enhancements were observed in the abundance of bacterivores and omnivores, the fungivore and omnivore biomass carbon, and the connectance within fungal and bacterial channels. Specific insights reveal that grasslands established with Elymus nutans and Elymus sinosubmuticus notably boost the Margalef richness, omnivore biomass carbon, and both functional and structural metabolic footprints, with E. sinosubmuticus grasslands uniquely elevating the fungal channel connectivity. Elymus sibiricus grasslands, in particular, were associated with increased fungivore biomass carbon and metabolic footprints, as well as increased connectance in fungal and omnivore–predator channels. In summation, E. sibiricus, E. nutans, and E. sinosubmuticus emerge as superior choices for artificial grassland cultivation on the QTP, as suggested by soil nematode indicators. The adoption of mixed-species sowing incorporating these three candidates potentially offers enhanced benefits to the soil food web, although this hypothesis warrants further investigation. Full article

Invasive plants are capable of homogenizing both aboveground and belowground biota and, along with climate change, are recognized as one of the biggest threats to global biodiversity. Soil nematode communities reflect the surroundings they inhabit and are therefore frequently employed as biological indicators of soil condition. In this study, soil properties and nematode communities in Carpathian beech forest floor covered by dense vegetation of invasive Impatiens parviflora (small balsam) were investigated over two vegetation seasons. We assumed that the spread of invasive I. parviflora could influence soil fauna through litter accumulation when established and could also change several soil properties, consequently altering soil nematode communities. A total of 52 nematode species were found in the soil samples. The mean number of species varied from 18 to 31, but did not significantly differ between invaded and uninvaded plots across all sampling dates. However, redundancy analysis indicated that the nematode community in plots with small balsam differed significantly from that in uninvaded plots, reflecting different proportions of genera in the two communities. Invasion by small balsam significantly enhanced the relative abundance of bacterivores, whereas it decreased the abundance of plant parasites and root-fungal feeders, mainly in the spring and summer season. Ordination of nematode species along the structure index and enrichment index trajectories revealed a maturing food web, low to moderately disturbed in the I. parviflora invaded soils as well as in uninvaded forest plots. Decomposition channels of soil food webs in both plots were balanced and fungal–bacterial mediated, although low values of the channel index suggested prevailing bacterial decomposition. Our study reveals that the expansion of I. parviflora moderately influenced the composition of nematode communities and the soil food web, increased soil nitrogen, carbon and C/N ratio, but did not modify soil acidity. Full article