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Keywords = microphytoplankton

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31 pages, 6565 KiB  
Article
Remotely Sensing Phytoplankton Size Structure in the Mediterranean Sea: Insights from In Situ Data and Temperature-Corrected Abundance-Based Models
by John A. Gittings, Eleni Livanou, Xuerong Sun, Robert J. W. Brewin, Stella Psarra, Manolis Mandalakis, Alexandra Peltekis, Annalisa Di Cicco, Vittorio E. Brando and Dionysios E. Raitsos
Remote Sens. 2025, 17(14), 2362; https://doi.org/10.3390/rs17142362 - 9 Jul 2025
Viewed by 361
Abstract
Since the mid-1980s, the Mediterranean Sea’s surface and deeper layers have warmed at unprecedented rates, with recent projections identifying it as one of the regions most impacted by rising global temperatures. Metrics that characterize phytoplankton abundance, phenology and size structure are widely utilized [...] Read more.
Since the mid-1980s, the Mediterranean Sea’s surface and deeper layers have warmed at unprecedented rates, with recent projections identifying it as one of the regions most impacted by rising global temperatures. Metrics that characterize phytoplankton abundance, phenology and size structure are widely utilized as ecological indicators that enable a quantitative assessment of the status of marine ecosystems in response to environmental change. Here, using an extensive, updated in situ pigment dataset collated from numerous past research campaigns across the Mediterranean Sea, we re-parameterized an abundance-based phytoplankton size class model that infers Chl-a concentration in three phytoplankton size classes: pico- (<2 μm), nano- (2–20 μm) and micro-phytoplankton (>20 μm). Following recent advancements made within this category of size class models, we also incorporated information of sea surface temperature (SST) into the model parameterization. By tying model parameters to SST, the performance of the re-parameterized model was improved based on comparisons with concurrent, independent in situ measurements. Similarly, the application of the model to remotely sensed ocean color observations revealed strong agreement between satellite-derived estimates of phytoplankton size structure and in situ observations, with a performance comparable to the current regional operational datasets on size structure. The proposed conceptual regional model, parameterized with the most extended in situ pigment dataset available to date for the area, serves as a suitable foundation for long-term (1997–present) analyses on phytoplankton size structure and ecological indicators (i.e., phenology), ultimately linking higher trophic level responses to a changing Mediterranean Sea. Full article
(This article belongs to the Section Ocean Remote Sensing)
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17 pages, 2584 KiB  
Article
Environmental Heterogeneity of Conservation Units in the Amazon Ensures High Contribution to Phytoplankton Beta Diversity in Streams
by Idelina Gomes da Silva, Ellen Guimarães Amaral Trindade, Leandra Palheta and Bárbara Dunck
Phycology 2025, 5(3), 30; https://doi.org/10.3390/phycology5030030 - 1 Jul 2025
Viewed by 289
Abstract
Conservation units (CUs) play a fundamental role in maintaining and conserving biodiversity, and are important in preserving streams, reducing impacts from human activities and increasing water availability beyond the boundaries of the reserves. However, knowledge about the phytoplankton biodiversity of ecosystems in CUs [...] Read more.
Conservation units (CUs) play a fundamental role in maintaining and conserving biodiversity, and are important in preserving streams, reducing impacts from human activities and increasing water availability beyond the boundaries of the reserves. However, knowledge about the phytoplankton biodiversity of ecosystems in CUs is scarce. This study evaluated how environmental integrity alters microphytoplankton communities in extractive CUs and their surroundings in the southwestern Brazilian Amazon. Our results demonstrated that the streams exhibited distinct physicochemical and hydrological characteristics, representing spatially heterogeneous environments. Differences in habitat integrity values altered species composition in streams within and outside conservation units. Local beta diversity (LCBD) was negatively influenced by habitat integrity, indicating that sites with greater habitat integrity did not always present a greater number of unique species. The species Trachelomonas hispida, Gyrosigma scalproides and Spirogyra sp. were the ones that contributed the most to beta diversity. However, the phytoplankton species that contributed most to beta diversity were not always associated with streams with greater integrity, indicating that even environments that are less intact play a relevant role in maintaining species richness and beta diversity of microphytoplankton. Factors such as habitat integrity, pH, temperature and dissolved oxygen were the main influencers of microphytoplankton in the streams. Thus, the streams of both CUs and their surroundings, despite their physical–chemical and hydrological differences, effectively contribute to the high richness and beta diversity of regional microphytoplankton. Full article
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24 pages, 2276 KiB  
Article
Key Environmental Drivers of Summer Phytoplankton Size Class Variability and Decadal Trends in the Northern East China Sea
by Jung-Woo Park, Huitae Joo, Hyo Keun Jang, Jae Joong Kang, Joon-Soo Lee and Changsin Kim
Remote Sens. 2025, 17(11), 1954; https://doi.org/10.3390/rs17111954 - 5 Jun 2025
Viewed by 594
Abstract
Phytoplankton size classes (PSC), which categorize phytoplankton into pico- (<2 µm), nano- (2–20 µm), and microphytoplankton (>20 µm), have been widely used to describe functional group responses to environmental variability. Distribution of PSCs heavily influences marine ecosystems and biogeochemical processes. Despite the importance [...] Read more.
Phytoplankton size classes (PSC), which categorize phytoplankton into pico- (<2 µm), nano- (2–20 µm), and microphytoplankton (>20 µm), have been widely used to describe functional group responses to environmental variability. Distribution of PSCs heavily influences marine ecosystems and biogeochemical processes. Despite the importance of PSC distributions, especially in the face of climate change, long-term studies on PSC variability and its driving factors are lacking. This study aimed to identify the key environmental drivers affecting summer PSC variability in the northern East China Sea (NECS) by analyzing 27 years (1998–2024) of satellite-derived data. Statistical analyses using random forest and multiple linear regression models revealed that euphotic depth (Zeu) and suspended particulate matter (SPM) were the primary factors influencing PSC variation; deeper Zeu values favored smaller picophytoplankton, whereas higher SPM concentrations supported larger PSCs. Long-term trend analysis showed a clear shift toward increasing picophytoplankton contributions (+2.4% per year), with corresponding declines in nano- and microphytoplankton levels (2.2% and 0.4% annually, respectively). These long-term changes are hypothesized to result from a persistent decline in SPM concentrations, which modulate light attenuation and nutrient dynamics in the euphotic zone. Marine heat waves intensify these shifts by promoting picophytoplankton dominance through enhanced stratification and reduced nutrient availability. These findings underscore the need for continuous monitoring to inform ecosystem management and predict the impacts of climate change in the NECS. Full article
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16 pages, 2648 KiB  
Article
Ecological Geography of the Phytoplankton Associated to Bio-Optical Variability and HPLC-Pigments in the Central Southwestern Gulf of Mexico
by Eduardo Millán-Núñez and Martín Efraìn De la Cruz-Orozco
J. Mar. Sci. Eng. 2025, 13(6), 1128; https://doi.org/10.3390/jmse13061128 - 5 Jun 2025
Viewed by 402
Abstract
An oceanographic cruise with 34 stations was conducted in the central-southwestern region of the Gulf of Mexico from February 19 to 10 March 2013. This study included the measurement of hydrographic and phytoplankton bio-optical parameters, and pigment samples were collected at two depth [...] Read more.
An oceanographic cruise with 34 stations was conducted in the central-southwestern region of the Gulf of Mexico from February 19 to 10 March 2013. This study included the measurement of hydrographic and phytoplankton bio-optical parameters, and pigment samples were collected at two depth levels (10 and 50 m). Our results showed a warm and nutrient-depleted water column associated with low chlorophyll a (<1 mg Chla m−3) and average values of aph440 (0.01 ± 0.008, m−1) and ad350 (0.04 ± 0.02, m−1). In addition, nano-microphytoplankton abundance and pigments were analyzed using a light microscope and HPLC, respectively. Overall, the Gulf of Mexico exhibited oligotrophic characteristics, with Chla (0.17 ± 0.11 mg m−3) and NO3 (0.03 ± 0.001 µM), except at 50 m depth in some stations north of Yucatán and in Campeche Bay and at surface level off the Tamaulipas shelf. In these three regions, values of aph(440), ad(350), (Chla) and phytoplankton abundance (>12 × 103 cells L−1) were observed near river mouths and under seasonal oceanographic forcings, which increased the growth and diversity of phytoplankton. The most relevant pigments found were DVchla (0.06 ± 0.13 mg m−3), Chlb (0.16 ± 0.21 mg m−3), Zea (0.06 ± 0.03 mg m−3), and Hex-fuco (0.02 ± 0.02 mg m−3); these are associated with the presence of Prochlorococcus, chlorophytes, Synechococcus, prymnesiophytes, and diatoms. Through the bio-optical variability, we determined the ecological geography of phytoplankton in four different spectral shapes, where M1 and M2 represent the group of cyanobacteria (Prochlorococcus and Synechococcus) and M3 and M4 represent a mixture of diatoms, dinoflagellates, and chlorophytes. In conclusion, we consider that oceanographic processes such as cyclonic and anticyclonic structures and permanent rivers determine the favorable changes in phytoplankton (>nutrients, Chla, aph440) and an increment in the number of phytoplankton spectral shapes). Full article
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25 pages, 8667 KiB  
Article
Lowermost Carboniferous (Tournaisian) Miospore Assemblages from the July Field, Gulf of Suez, Egypt: Biostratigraphic and Palaeoenvironmental Implications
by Ahmed Maher and Jiří Bek
Life 2025, 15(6), 872; https://doi.org/10.3390/life15060872 - 28 May 2025
Viewed by 365
Abstract
The Nubia Sandstone in the Gulf of Suez, Egypt, is a well-known unclassified sediment. Palynology is considered the most effective tool for dealing with this problem. Miospore assemblages from the Lowermost Carboniferous (Tournaisian) have been discovered from the J62-86 and the J62-64 AST1 [...] Read more.
The Nubia Sandstone in the Gulf of Suez, Egypt, is a well-known unclassified sediment. Palynology is considered the most effective tool for dealing with this problem. Miospore assemblages from the Lowermost Carboniferous (Tournaisian) have been discovered from the J62-86 and the J62-64 AST1 wells located in the July Field of the Gulf of Suez, Egypt. Spores are moderately to poorly preserved, suggesting a stratigraphical position within Lowermost Carboniferous ages. The studied sediments include poorly preserved conodont fragments and present significant identification challenges due to the drilling methodologies’ complexities. Spore assemblage consists of 31 genera with 56 species. The dominant spores include zonate genera Vallatisporites, Densosporites, and Archaeozonotriletes, camerate genera Grandispora, Geminospora, apiculate genera Apiculiretusispora, and laevigate trilete genus Punctatisporites and megaspores of the Lagenoisporites type are recorded. Marine microphytoplankton including Schizocystia bicornuta, Lophosphaeridium, Leiosphaerida, and some filamentous green algae of unknown affinity are recorded. The dispersed spore assemblage is associated with carbonized plant fragments. The palynological data have effectively dated the lower intervals of the Nubia Sandstone from the Nubia “B,” indicating a Lowermost Carboniferous (Tournaisian) age, i.e., Vallatisporites vallatus–Retustriletes incohatus palynozone (VI). The stratigraphic differentiation of the Nubia Sandstone is crucial for subsequent correlating subsurface wells in the Gulf of Suez within the context of geology and hydrocarbon exploration, particularly given the scarcity of other fossil groups. Full article
(This article belongs to the Special Issue Back to Basics in Palaeontology)
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23 pages, 9460 KiB  
Article
Phytoplankton Assemblage over a 14-Year Period in the Adriatic Sea: Patterns and Trends
by Sanda Skejić, Blanka Milić Roje, Frano Matić, Jasna Arapov, Janja Francé, Mia Bužančić, Ana Bakrač, Maja Straka and Živana Ninčević Gladan
Biology 2024, 13(7), 493; https://doi.org/10.3390/biology13070493 - 2 Jul 2024
Cited by 5 | Viewed by 1997
Abstract
Considering the role of phytoplankton in the functioning and health of marine systems, it is important to characterize its responses to a changing environment. The central Adriatic Sea, as a generally oligotrophic area, is a suitable environment to distinguish between regular fluctuations in [...] Read more.
Considering the role of phytoplankton in the functioning and health of marine systems, it is important to characterize its responses to a changing environment. The central Adriatic Sea, as a generally oligotrophic area, is a suitable environment to distinguish between regular fluctuations in phytoplankton and those caused by anthropogenic or climatic influences. This study provides a long-term perspective of phytoplankton assemblage in the central eastern Adriatic Sea, with 14 years of continuous time series data collected at two coastal and two offshore stations. The predominant phytoplankton groups were diatoms and phytoflagellates, but their proportion varied depending on the vicinity of the coast, as evidenced also by the distribution of chlorophyll a. In the coastal environment, the phytoplankton biomass was substantially higher, with a higher proportion of microphytoplankton, while small phytoplankton accounted for the majority of biomass in the offshore area. In addition, a decreasing trend in diatom abundance was observed in the coastal waters, while such trend was not so evident in the offshore area. Using a neural gas algorithm, five clusters were defined based on the contribution of the major groups. The observed increase in diversity, especially in dinoflagellates, which outnumber diatom taxa, could be a possible adaptation of dinoflagellates to the increased natural solar radiation in summer and the increased sea surface temperature. Full article
(This article belongs to the Special Issue Climate Change and Marine Plankton)
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13 pages, 2183 KiB  
Article
Comparative Analysis of the Fatty Acid Profiles of Antarctic Krill (Euphausia superba Dana, 1850) in the Atlantic Sector of the Southern Ocean: Certain Fatty Acids Reflect the Oceanographic and Trophic Conditions of the Habitat
by Svetlana A. Murzina, Viktor P. Voronin, Dmitry G. Bitiutskii, Aleksej V. Mishin, Svetlana N. Khurtina, Dmitry I. Frey and Alexei M. Orlov
J. Mar. Sci. Eng. 2023, 11(10), 1912; https://doi.org/10.3390/jmse11101912 - 3 Oct 2023
Cited by 5 | Viewed by 1829
Abstract
The present study is the attempt to combine oceanologic measurements and biochemical analysis, which is as possible to implement on board as in a laboratory with chosen certain statistics to reveal trophic conditions and the environment state in which Antarctic krill live in [...] Read more.
The present study is the attempt to combine oceanologic measurements and biochemical analysis, which is as possible to implement on board as in a laboratory with chosen certain statistics to reveal trophic conditions and the environment state in which Antarctic krill live in season in real time on site. The fatty acid constituents of total lipids in juvenile and mature Antarctic krill sampled from the Bransfield Strait (BS), the Antarctic Sound (AS), and waters at the eastern tip of the Antarctic Peninsula (AP) collected during the 87th cruise of the R/V Akademik Mstislav Keldysh in January–February 2022 were analyzed. The fatty acid (FA) profile in juvenile and mature Antarctic krill was studied by gas chromatography with a mass selective detector to identify the qualitative composition and a flame ionization detector to quantify the studied FAs. Using NMDS analysis (quantitative panel), great difference was found between krill from the BS compared to krill collected in the AS and the AP. The differences are reliable owing to the following 16 FAs, most of them trophic biomarkers of microphytoplankton, and suggest regional differences, mainly in abundance and ability of forage objects. CTD measurements discuss the abiotic factors (potential temperature, salinity, and chlorophyll “a”). Compensatory modifications of the composition of FA components in Antarctic krill inhabiting different water areas are a way of maintaining the species’ viability under certain and variable habitat conditions. Full article
(This article belongs to the Section Marine Biology)
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25 pages, 6216 KiB  
Article
Response of Phytoplankton Communities to Variation in Salinity in a Small Mediterranean Coastal Lagoon: Future Management and Foreseen Climate Change Consequences
by Viviana Ligorini, Marie Garrido, Nathalie Malet, Louise Simon, Loriane Alonso, Romain Bastien, Antoine Aiello, Philippe Cecchi and Vanina Pasqualini
Water 2023, 15(18), 3214; https://doi.org/10.3390/w15183214 - 9 Sep 2023
Cited by 6 | Viewed by 2776
Abstract
Mediterranean coastal lagoons are particularly vulnerable to increasing direct anthropogenic threats and climate change. Understanding their potential responses to global and local changes is essential to develop management strategies adapted to these ecosystems. Salinity is a fundamental structuring factor for phytoplankton communities; however, [...] Read more.
Mediterranean coastal lagoons are particularly vulnerable to increasing direct anthropogenic threats and climate change. Understanding their potential responses to global and local changes is essential to develop management strategies adapted to these ecosystems. Salinity is a fundamental structuring factor for phytoplankton communities; however, its role under climate change is understudied. We hypothesized that salinity variations imposed by climate change and/or management actions could disturb Mediterranean lagoons’ phytoplankton communities. To test our hypothesis, we performed two 5-day microcosm experiments in which natural phytoplankton assemblages from the Santa Giulia lagoon (Corsica Island) were subjected to three increasing (53–63–73) and decreasing (33–26–20) levels of salinity, to mimic strong evaporation and flash flooding, respectively. Results indicate that over-salinization inhibited growth and modified the assemblages’ composition. Freshening, on the contrary, showed feeble effects, mainly boosting microphytoplankton abundance and depleting diversity at lowest salinity. In both experiments and under freshening in particular, initially rare species emerged, while photosynthetic activity was degraded by salinity increase only. We demonstrated that phytoplankton communities’ structure and metabolism are strongly altered by the predicted implications of climate change. Such impacts have to be considered for future management of coastal lagoons (control of sea exchanges and watershed fluxes). This work constitutes a priority step towards the proactive adapted management and conservation of such as-yet-neglected ecosystems in the context of climate change. Full article
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23 pages, 14372 KiB  
Article
Phytoplankton Diversity and Co-Dependency in a Stratified Oligotrophic Ecosystem in the South Adriatic Sea
by Antonija Matek, Maja Mucko, Raffaella Casotti, Anna Chiara Trano, Eric P. Achterberg, Hrvoje Mihanović, Hrvoje Čižmek, Barbara Čolić, Vlado Cuculić and Zrinka Ljubešić
Water 2023, 15(12), 2299; https://doi.org/10.3390/w15122299 - 20 Jun 2023
Cited by 6 | Viewed by 3225
Abstract
The oligotrophy of the southern Adriatic Sea is characterized by seasonal stratification which enables nutrient supply to the euphotic layer. A set of interdisciplinary methods was used to elucidate the diversity and co-dependency of bacterio- and phytoplankton of the water column during the [...] Read more.
The oligotrophy of the southern Adriatic Sea is characterized by seasonal stratification which enables nutrient supply to the euphotic layer. A set of interdisciplinary methods was used to elucidate the diversity and co-dependency of bacterio- and phytoplankton of the water column during the stratification period of July 2021. A total of 95 taxa were determined by microscopy: 58 diatoms, 27 dinoflagellates, 6 coccolithophores, and 4 other autotrophs, which included Chlorophyceae, Chrysophyceae, and Cryptophytes. Nanophytoplankton abundances were higher in comparison to microphytoplankton. The prokaryotic plankton community as revealed by HTS was dominated by Proteobacteria (41–73%), Bacteroidota (9.5–27%), and cyanobacteria (1–10%), while the eukaryotic plankton community was composed of parasitic Syndiniales (45–80%), Ochrophyta (2–18%), Ciliophora (2–21%), Chlorophytes (2–4%), Haptophytes (1–4%), Bacillariophyta (1–13%), Pelagophyta (0.5–12%) and Chrysophyta (0.5–3%). Flow cytometry analysis has recorded Prochlorococcus and photosynthetic picoeukaryotes as more abundant in deep chlorophyll maximum (DCM), and Synechococcus and heterotrophic bacteria as most abundant in surface and thermocline layers. Surface, thermocline, and DCM layers were distinct considering community diversity, temperature, and nutrient correlations, while extreme nutrient values at the beginning of the investigating period indicated a possible nutrient flux. Nutrient and temperature were recognized as the main environmental drivers of phytoplankton and bacterioplankton community abundance. Full article
(This article belongs to the Special Issue Marine Phytoplankton Diversity)
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21 pages, 3775 KiB  
Article
Influence of Some Environmental Factors on Summer Phytoplankton Community Structure in the Varna Bay, Black Sea (1992–2019)
by Daniela Klisarova, Dimitar Gerdzhikov, Nina Nikolova, Martin Gera and Petya Veleva
Water 2023, 15(9), 1677; https://doi.org/10.3390/w15091677 - 25 Apr 2023
Cited by 3 | Viewed by 2249
Abstract
During the last decades, a decrease in the nutrients and an increase in marine temperature on the surface of the Varna Bay of the Black Sea have been registered. The main aim of this study was to establish the influence of some environmental [...] Read more.
During the last decades, a decrease in the nutrients and an increase in marine temperature on the surface of the Varna Bay of the Black Sea have been registered. The main aim of this study was to establish the influence of some environmental factors (SST, TP, DIN) on the structure of the phytoplankton and to define what part of these dynamics results from the changes in temperature. Bivariate correlation and Nonlinear regression analyses were used to establish the connection between factors of the environment and the quality parameters of different size and taxonomic groups of phytoplankton. The rising SST proved to statistically significantly influence the decrease in the abundance of nano-phytoplankton (50.9%), the abundance and biomass of micro-phytoplankton (53%; 33.2%), the Bacillariophyceae (49.5%; 35.6%), and the biomass of the species of group “Other” (51.4%). The decreasing TP has a significant influence on the decrease in the abundance and biomass of the diatoms and the biomass of group “Other”. The decreasing DIN significantly affects the decrease in the abundance and biomass of Dinophyceae. The analyses showed that rising temperatures had a leading role in the changes in the taxonomic and size structure of phytoplankton during the period 1992–2019. Full article
(This article belongs to the Section Water and Climate Change)
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24 pages, 5444 KiB  
Article
Carbon and Iron Uptake by Phytoplankton in the Amundsen Sea, Antarctica
by Bo Wang, Lingfang Fan, Minfang Zheng, Yusheng Qiu and Min Chen
Biology 2022, 11(12), 1760; https://doi.org/10.3390/biology11121760 - 4 Dec 2022
Cited by 3 | Viewed by 2356
Abstract
Freshwater components in the Southern Ocean, whether sea ice meltwater or meteoric water, influence the growth of phytoplankton by affecting water stability and supplying dissolved iron (DFe). In addition, melting sea ice stimulates phytoplankton blooms by providing ice algae. In this study, sea [...] Read more.
Freshwater components in the Southern Ocean, whether sea ice meltwater or meteoric water, influence the growth of phytoplankton by affecting water stability and supplying dissolved iron (DFe). In addition, melting sea ice stimulates phytoplankton blooms by providing ice algae. In this study, sea ice meltwater and meteoric water in the Amundsen Sea (AS) were differentiated by their stable oxygen isotopic compositions (δ18O), while the phytoplankton carbon fixation rate (CFR) and iron uptake rate (FeUR) values were determined using the 14C and 55Fe tracer assays, respectively. Our results showed that FeUR exhibits a significant positive response only to sea ice meltwater, suggesting that DFe and algae provided by sea ice melting may be the main cause. In addition, the CFR had a slightly positive response to the freshwater input and a stronger correlation with the phytoplankton biomass, suggesting that the freshwater input may have enhanced the CFR through the algae released from sea ice melting. The FeUR normalized to the phytoplankton biomass was significantly positively correlated with the mixed layer depth, suggesting that water stability regulates the phytoplankton growth and the resulting Fe demand. A higher Fe demand per unit of carbon fixation during sea ice formation leads to a higher Fe/C ratio in phytoplankton. Although no significant correlations were observed between the FeUR, CFR, and meteoric water, meteoric water may have an effect on larger phytoplankton sensitive to Fe deficiencies. The results of culture experiments with DFe addition showed that the added Fe significantly enhanced the Fe uptake, carbon fixation, and Fe/C ratio of the cells, especially for micro-phytoplankton. The more pronounced response of micro-phytoplankton means that the meteoric water input may affect the efficiency of carbon export. Our study provides the first measurements of phytoplankton Fe quotas in the AS in austral late summer and early autumn, providing insights into how meteoric water and sea ice meltwater affect seasonal changes in Antarctic ecosystems. Full article
(This article belongs to the Special Issue Polar Ecosystem: Response of Organisms to Changing Climate)
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22 pages, 3891 KiB  
Article
Impacts of Mesoscale Eddies on Biogeochemical Variables in the Northwest Pacific
by Jianhua Kang, Yu Wang, Shuhong Huang, Lulu Pei and Zhaohe Luo
J. Mar. Sci. Eng. 2022, 10(10), 1451; https://doi.org/10.3390/jmse10101451 - 7 Oct 2022
Cited by 4 | Viewed by 2292
Abstract
Mesoscale eddies play an important role in regulating biogeochemical cycles. However, the response of biogeochemical variables to cold and warm eddies has not been well elucidated, mainly due to most previous studies relying on remote sensing techniques and lacking in situ observations below [...] Read more.
Mesoscale eddies play an important role in regulating biogeochemical cycles. However, the response of biogeochemical variables to cold and warm eddies has not been well elucidated, mainly due to most previous studies relying on remote sensing techniques and lacking in situ observations below the surface water. Here, we used hydrographic and biochemical data from one survey in the northwestern Pacific to document the vertical biogeochemical structure of one cold and two warm eddies. We first compared the changes of key variables in the eddy core relative to eddy outside, explained the role of key layers (the mixing depth, pycnocline, nutricline, euphotic) in causing these changes, and then analyzed the main environmental factors affecting chlorophyll a (Chla) and phytoplankton communities. Finally we focused on the response mechanisms of key biogeochemical variables to the cold and warm eddies. The results showed that biological variables (Chla, microphytoplankton, picophytoplankton), salinity, dissolved inorganic nitrogen (DIN), dissolved inorganic phosphate (DIP), and dissolved inorganic silicate (DSi) in the cold eddy core increased by 0.2–134%, while in the warm eddy core, they decreased by 0.2–70% relative to the eddy outside. The cold and warm eddies were able to force the deep chlorophyll maximum (DCM), which rose or fell with the pycnocline, nutricline and euphotic depth (Zeu) as a whole. Cold eddies with a raised thermocline could lead to about 20 m elevated DCM and enhanced phytoplankton biomass when the nutricline and thermocline were coincident. In contrast, warm eddies drove isopycnals downward, resulting in a 10–25 m drop in DCM and a decrease in nutrient and Chla concentrations at the center of the eddies. The significant difference in the vertical structure of the phytoplankton community between the center and the outside of the eddy might be explained by the direct influence of both nutrient concentrations and stoichiometry changes. The contribution of microphytoplankton to total biomass was much smaller than that of picophytoplankton in oligotrophic waters where the DIN:DIP and DSi:DIN ratios are significantly low. Compared to nutrients, photosynthetically active radiation (PAR) might not be the main factor controlling phytoplankton biomass and abundance attributed to Zeu being consistently deeper than the mixed depth (Zm), whereas it was likely to be the key limiting factor affecting the vertical distribution of the phytoplankton community. Full article
(This article belongs to the Section Marine Ecology)
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17 pages, 3600 KiB  
Article
Feeding Selectivity of Ruditapes philippinarum on Phytoplankton
by Yin Liu, Lun Song, Guangjun Song, Jinhao Wu, Kun Wang, Zhaohui Wang and Suxuan Liu
Fishes 2022, 7(5), 222; https://doi.org/10.3390/fishes7050222 - 26 Aug 2022
Cited by 5 | Viewed by 2493
Abstract
A monthly survey of the feeding selectivity of Ruditapes philippinarum in the Yalu River Estuary in 2020–2021 was conducted using high-throughput sequencing identification and visual grading technology. The results showed that the most-dominant species in the water of the shellfish culture area and [...] Read more.
A monthly survey of the feeding selectivity of Ruditapes philippinarum in the Yalu River Estuary in 2020–2021 was conducted using high-throughput sequencing identification and visual grading technology. The results showed that the most-dominant species in the water of the shellfish culture area and in the stomachs of R. philippinarum was Karlodinium veneficum in those years. The selectivity index (E) indicated that R. philippinarum avoided consuming Bacillariophyta, Chrysophyta and Cryptophyta throughout the year and preferentially consumed Dinophyta and Chlorophyta. In 2020, the annual average biomass of Dinophyta, Bacillariophyta, Chlorophyta, Dictyochophyta, Cryptophyta and Chrysophyta in the stomach contents of R. philippinarum was 54:14:16:1:10:4; it was 41:12:28:0:1:17 in 2021. The annual average biomass ratio of picophytoplankton, nanophytoplankton and microphytoplankton in the stomachs of R. philippinarum was 13:48:39 in 2020; it was 14:66:20 in 2021. R. philippinarum actively fed on nanophytoplankton and avoided picophytoplankton. Among the phytoplankton of different sizes and groups that R. philippinarum prefer to feed, chemical oxygen demand (COD) and organic phosphorus (DOP) have a significant negative effect on the nanophytoplankton community, pH has a positive effect on the Dictyochophyta community and COD and the inorganic nitrogen to phosphorus ratio (DI-N/P) have a significant positive effect on the Chlorophyta community. Full article
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19 pages, 5331 KiB  
Article
Remote Sensing of Marine Phytoplankton Sizes and Groups Based on the Generalized Addictive Model (GAM)
by Yuchao Wang and Fenfen Liu
Remote Sens. 2022, 14(13), 3037; https://doi.org/10.3390/rs14133037 - 24 Jun 2022
Cited by 6 | Viewed by 2989
Abstract
Marine phytoplankton are the basis of the whole marine ecosystem, and different groups of phytoplankton play different roles in the biogeochemical cycle. Satellite remote sensing is widely used in the retrieval of marine phytoplankton over a wide range and long time series, but [...] Read more.
Marine phytoplankton are the basis of the whole marine ecosystem, and different groups of phytoplankton play different roles in the biogeochemical cycle. Satellite remote sensing is widely used in the retrieval of marine phytoplankton over a wide range and long time series, but not yet for taxonomical composition. In this study, we used coincident in situ measurement data from high-performance liquid chromatography (HPLC) and remote sensing reflectance (Rrs) to investigate the empirical relationships between phytoplankton groups and satellite measurements. A nonparametric model, generalized additive model (GAM), is introduced to establish inversion models of various marine phytoplankton groups. Seven inversion models (two sizes classes among the microphytoplankton and nanophytoplankton and four groups among the diatoms, dinoflagellates, chrysophytes, and cryptophytes) are applied to the South China Sea (SCS) for 2020, and satellite images of phytoplankton sizes and groups are presented. Microphytoplankton prevails in the coastal and continental shelf, and nanophytoplankton prevails in oligotrophic oceans. Among them, the dominant contribution of microphytoplankton comes from diatoms, and nanophytoplankton comes from chrysophytes. Diatoms (nearshore) and chrysophytes (outside the continental shelf) are the dominant groups in the SCS throughout the year. Dinoflagellates only become dominant in some coastal areas, while cryptophytes rarely become dominant. Full article
(This article belongs to the Special Issue Remote Sensing of Phytoplankton Ecology)
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17 pages, 4000 KiB  
Article
Characterization of Seasonal Phytoplankton Pigments and Functional Types around Offshore Island in the East/Japan Sea, Based on HPLC Pigment Analysis
by Minji Lee, Yun-Bae Kim, Chan-Hong Park and Seung-Ho Baek
Sustainability 2022, 14(9), 5306; https://doi.org/10.3390/su14095306 - 28 Apr 2022
Cited by 11 | Viewed by 3219
Abstract
In this study, we investigated the seasonal phytoplankton community and phytoplankton functional types (PFTs) in the vicinity of Dokdo Island, located in the East/Japan Sea, in 2019. With strong seasonal winds, the water column was well mixed in winter. In spring and autumn, [...] Read more.
In this study, we investigated the seasonal phytoplankton community and phytoplankton functional types (PFTs) in the vicinity of Dokdo Island, located in the East/Japan Sea, in 2019. With strong seasonal winds, the water column was well mixed in winter. In spring and autumn, the upper mixed layer depth (MLD) was relatively deep, and the Subsurface Chlorophyll Maximum (SCM) formed in the middle layer. Small phytoplankton were dominant in the summer, which is a time of high water temperatures and strong stratification associated with a shallower MLD. Based on CHEMTAX analysis, in spring, the high phytoplankton biomass was mainly derived from cyanobacteria, diatoms, and dinoflagellates. In summer, >73.2% of the surface biomass was comprised of cyanobacteria. In autumn, pelagophytes accounted for the highest proportion of the biomass. The fraction of microphytoplankton (fmicro) was highest in winter and spring, whereas the fraction of nanophytoplankton (fnano) was highest in autumn and summer. A high fraction of picophytoplankton (fpico) was evident in the surface layers in summer. Values for both the photoprotection index (PI) and the ratio of photoprotective carotenoids (PPC) to photosynthetic carotenoids (PSC) indicate that this study area had high primary productivity in 2019. In order to predict long-term changes in marine food webs due to climate change, it is important to evaluate the size and composition of phytoplankton. Full article
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