Search Results (314)

Tropical sandy beaches are dynamic ecosystems where microbial communities play crucial roles in biogeochemical processes and tracking human impact. Despite their importance, these habitats remain underexplored. Here, using amplicon-based sequencing of bacterial (V3-V4 16S rRNA) and fungal (ITS2) markers, we first describe microbial communities inhabiting supralittoral–intertidal sediments of two contrasting sandy beaches in the Tadjoura Gulf (Djibouti Republic): Sagallou-Kalaf (SK, rural, siliceous sand) and Siesta Plage (SP, urban, calcareous sand). Sand samples were collected at low tide along 10 m transects perpendicular to the shoreline. Bacterial communities differed significantly between sites and along the sea-to-land gradient, suggesting an influence from both anthropogenic activity and sediment granulometry. SK was dominated by Escherichia-Shigella, Staphylococcus, and Bifidobacterium, associated with human and agricultural sources. SP showed higher richness, with enriched marine-associated genera such as Hoeflea, Xanthomarina, and Marinobacter, also linked to hydrocarbon degradation. Fungal diversity was less variable, but showed significant shifts along transects. SK communities were dominated by Kluyveromyces and Candida, while SP hosted a broader fungal assemblage, including Pichia, Rhodotorula, and Aureobasidium. The higher richness at SP suggests that calcium-rich sands, possibly due to their buffering capacity and greater moisture retention, offer more favorable conditions for microbial colonization. Full article

Military personnel deployed to Iraq and Afghanistan were exposed to emissions from open-air burn pits, where plastics, metals, and medical waste were incinerated. These exposures have been linked to deployment-related respiratory diseases (DRRD) and may also impact neurological health via the lung–brain axis. To investigate molecular mechanisms, adult male rats were exposed to filtered air, naphthalene (a representative volatile organic compound), or a combination of naphthalene and carbon black (surrogate for particulate matter; CBN) via whole-body inhalation (six hours/day, three consecutive days). Lung, brain, and plasma samples were collected 24 h after the final exposure. Pro-inflammatory biomarkers were assessed using multiplex electrochemiluminescence and western blot. Differentially expressed genes (DEGs) were identified by RNA sequencing, and elastic net modeling was used to define exposure-predictive gene signatures. CBN exposure altered inflammatory biomarkers across tissues, with activation of nuclear factor kappa B (NF-κB) signaling. In the lung, gene set enrichment revealed activated pathways related to proliferation and inflammation, while epithelial–mesenchymal transition (EMT) and oxidative phosphorylation were suppressed. In the brain, EMT, inflammation, and senescence pathways were activated, while ribosomal function and oxidative metabolism were downregulated. Elastic net modeling identified a lung gene signature predictive of CBN exposure, including Kcnq3, Tgfbr1, and Tm4sf19. These findings demonstrate that inhalation of a surrogate burn pit mixture induces inflammatory and metabolic gene expression changes in both lung and brain tissues, supporting the utility of this animal model for understanding systemic effects of airborne military toxicants and for identifying potential biomarkers relevant to DRRD and Veteran health. Full article

Unionid mussel populations in a section of the Clinch River in Virginia, USA, has declined substantially, but the causes of the decline remain unknown. To investigate this zone of decline (ZOD), we deployed juvenile freshwater mussels (Villosa iris in 2012 and Lampsilis fasciola in 2013) in both cages and silos at sites within the Clinch River System. We analyzed mussel tissues for trace element and organic contaminant concentrations, shells for trace elements, and environmental media (total water, dissolved water, particulate sediment, and bedload sediment) for both inorganic and organic contaminants. We found a few differences between mussels deployed in cages and those deployed in silos: survival was slightly lower in cages due to periodic sedimentation. Our results identified the ZOD based on the accumulation of trace elements (notably As, Cu, Fe, Mn, Ni, and Sr), polycyclic aromatic hydrocarbons (PAHs), and δ¹⁵N enrichment, with especially high concentrations found in the human-impacted tributaries, Dumps Creek and Guest River. Some correlations were found between environmental media and both mussel tissues and shells. In particular, PAHs and Mn had several significant relationships between bioaccumulated concentrations and environmental concentrations. Finally, Co, Cu, Fe, and V in soft tissues negatively correlated with mussel growth, whereas bioaccumulated PAH concentrations correlated negatively with resident mussel densities. Full article

Groundwater at petroleum-contaminated sites typically exhibits elevated dissolved inorganic carbon (DIC) levels due to hydrocarbon biodegradation; however, our prior field investigations revealed an enigmatic DIC depletion anomaly that starkly contradicts this global pattern and points to an unrecognized carbon sink. In a breakthrough demonstration, this study provides the first experimental confirmation that sulfur-oxidizing bacteria (SOB) drive substantial carbon sequestration via a coupled sulfur oxidation autotrophic assimilation process. Through integrated hydrochemical monitoring and 16S rRNA sequencing in an enrichment culture system, we captured the complete DIC transformation trajectory: heterotrophic acetate degradation initially increased DIC to 370 mg/L, but subsequent autotrophic assimilation by SOB dramatically reduced DIC to 270 mg/L, yielding a net consumption of 85 mg/L. The distinctive pH dynamics (initial alkalization followed by acidification) further corroborated microbial regulation of carbon cycling. Critically, Pseudomonas stutzeri and P. alcaliphila were identified as the dominant carbon-fixing agents. These findings definitively establish that chemolithoautotrophic SOB convert DIC into organic carbon through a “sulfur oxidation-carbon fixation” coupling mechanism, overturning the conventional paradigm of petroleum-contaminated sites as perpetual carbon sources. The study fundamentally redefines natural attenuation frameworks by introducing microbial carbon sink potential as an essential assessment metric for environmental sustainability. Full article

The lower sub-member of Member 2, Dongying Formation (Paleogene) in the HHK Depression hosts an extensively developed thin-bedded beach-bar system characterized by favorable source rock conditions and reservoir properties, indicating significant hydrocarbon exploration potential. Integrating drilling cores, wireline log interpretations, three-dimensional seismic data, geochemical analyses, and palynological data, this study investigates the sedimentary characteristics, sandbody distribution patterns, controlling factors, and genetic model of this lacustrine beach-bar system. Results reveal the following: (1) widespread thin-bedded beach-bar sandbodies dominated by fine-grained sandstones and siltstones, exhibiting wave ripples and low-angle cross-bedding; (2) two vertical stacking patterns, Type A, thick mudstone intervals intercalated with laterally continuous thin sandstone layers, and Type B, composite sandstones comprising thick sandstone units overlain by thin sandstone beds, both demonstrating significant lateral continuity; (3) three identified microfacies: bar-core, beach-core, and beach-margin facies; (4) key controls on sandbody development: paleoenvironmental evolution establishing the depositional framework, secondary fluctuations modulating depositional processes, strike-slip extensional tectonics governing structural zonation, paleobathymetry variations and paleotopography controlling distribution loci, and provenance clastic influx regulating scale and enrichment (confirmed by detrital zircon U-Pb dating documenting a dual provenance system). Collectively, these findings establish a sedimentary model for a thin-bedded beach-bar system under the strike-slip extensional tectonic framework. Full article

Soil contamination with petroleum hydrocarbons is a serious environmental issue, necessitating the development of effective and environmentally friendly remediation methods that align with the principles of sustainable development. This study investigated the impact of selected biosurfactants on the efficiency of the biodegradation of total petroleum hydrocarbons (TPH) and polycyclic aromatic hydrocarbons (PAHs) in contaminated soil. Six biosurfactants—poly-γ-glutamic acid (γ-PGA), rhamnolipid, surfactin, a mixture of γ-PGA, rhamnolipids, and surfactin (PSR), as well as two commercial formulations (JBR 425 and JBR 320)—were evaluated in combination with a bacterial consortium. Biodegradation experiments were conducted under laboratory conditions for a 90-day period. The effectiveness of the tested biosurfactants was assessed using respirometric analysis, the chromatographic determination of the residual hydrocarbon content, and toxicity assays. The results showed that the application of a bacterial consortium enriched with a mixture of biosurfactants PSR (a biosurfactant concentration in the inoculating mixture: 5 g/dm³) was the most effective approach, resulting in an oxygen uptake of 5164.8 mgO₂/dm³ after 90 days, with TPH and PAH degradation rates of 77.3% and 70.32%, respectively. Phytotoxicity values decreased significantly, with TU values ranging from 6.32 to 4.62 (growth inhibition) and 3.77 to 4.13 (germination). Toxicity also decreased in the ostracodtoxkit test (TU = 4.35) and the Microtox SPT test (TU = 4.91). Among the tested biosurfactants, surfactin showed the least improvement in its bioremediation efficiency. Under the same concentration as in the PSR mixture, the oxygen uptake was 3446.7 mgO₂/dm³, with TPH and PAH degradation rates of 60.64% and 52.64%, respectively. In the system inoculated with the bacterial consortium alone (without biosurfactants), the biodegradation efficiency reached 44.35% for TPH and 36.97% for PAHs. The results demonstrate that biosurfactants can significantly enhance the biodegradation of petroleum hydrocarbons in soil, supporting their potential application in sustainable bioremediation strategies. Full article

Aquatic pollution in the Bay of Bengal has become a major environmental issue with long-term impacts on fisheries, biodiversity, and ecosystems. The review paper examines the major pathways, sources, and ecological consequences of aquatic pollution in the Bay of Bengal. Pollutants such as heavy metals, pesticides, petroleum hydrocarbons, and microplastics have been reported at concerning levels in the soil and water in aquatic ecosystems. Rivers act as key routes, transporting pollutants from inland sources to the Bay of Bengal. These contaminants disrupt metabolic and physiological functions in fish and other aquatic species and pose serious threats to food safety and public health through bioaccumulation. Harmful algal blooms (HABs), caused by nutrient enrichment, further exacerbate ecosystem degradation in the Bay of Bengal. The review highlights the immediate need for strengthened pollution control regulations, real-time water quality monitoring, sustainable farming practices, and community-based policy interventions to preserve biodiversity and safeguard fisheries. Full article

The Oligocene Dongying Formation beach-bar system, widely distributed in the HHK Depression of the Bohai Bay Basin, constitutes a key target for mid-deep hydrocarbon exploration, though its provenance remains controversial due to complex peripheral source terrains. To address this, we developed an integrated methodology combining LA-ICP-MS zircon U-Pb dating with whole-rock rare earth element (REE) analysis, facilitating provenance studies in areas with limited drilling and heavy mineral data. Analysis of 849 high-concordance zircons (concordance >90%) from 12 samples across 5 wells revealed that Geochemical homogeneity is evidenced by strongly consistent moving-average trendlines of detrital zircon U-Pb ages among the southern/northern provenances and the central uplift zone, complemented by uniform REE patterns characterized by HREE (Gd-Lu) enrichment and LREE depletion; geochemical disparities manifest as dual dominant age peaks (500–1000 Ma and 1800–3100 Ma) in the southern provenance and central uplift samples, contrasting with three distinct peaks (65–135 Ma, 500–1000 Ma, and 1800–3100 Ma) in the northern provenance; spatial quantification via multidimensional scaling (MDS) demonstrates closer affinity between the southern provenance and central uplift (d_ij = 4.472) than to the northern provenance (d_ij = 6.708). Collectively, these results confirm a dual (north–south) provenance system for the central uplift beach-bar deposits, with the southern provenance dominant and the northern acting as a subsidiary source. This work establishes a dual-provenance beach-bar model, providing a universal theoretical and technical framework for provenance analysis in hydrocarbon exploration within analogous settings. Full article

Significant uranium exploration breakthroughs have been achieved in the eolian deposits of the uranium reservoirs in the southwestern part of the Ordos Basin. The redox environment remains a crucial factor in controlling the migration and precipitation of uranium. This study, through rock mineralogical observations and hydrocarbon gas composition analysis, combined with the regional source rock and basin tectonic evolution history, reveals the characteristics of the reducing medium and the mineralization mechanisms involved in uranium ore formation. The Lower Cretaceous Luohe Formation uranium reservoirs in the study area exhibit a notable lack of common reducing media, such as carbonaceous debris and pyrite. However, the total hydrocarbon gases in the Luohe Formation range from 2967 to 20,602 μmol/kg, with an average of 8411 μmol/kg—significantly higher than those found in uranium reservoirs elsewhere in China, exceeding them by 10 to 100 times. Due to the absence of other macroscopically visible organic matter, hydrocarbon gases are identified as the most crucial reducing agent for uranium mineralization. These gases consist predominantly of methane and originate from the Triassic Yanchang Formation source rock. Faults formed during the Indosinian, Yanshanian, and Himalayan tectonic periods effectively connect the Cretaceous uranium reservoirs with the oil and gas reservoirs of the Triassic and Jurassic, providing pathways for the migration of deep hydrocarbon fluids into the Cretaceous uranium reservoirs. The multiphase tectonic evolution of the Ordos Basin since the Cenozoic has facilitated the development of faults, ensuring a sufficient supply of reducing media for uranium reservoirs in an arid sedimentary context. Additionally, the “Replenishment-Runoff-Drainage System” created by tectonic activity promotes a continuous supply of uranium- and oxygen-bearing fluids to the uranium reservoirs, resulting in a multi-energy coupling mineralization effect. Full article

Permian shale gas, a resource-rich energy source, has garnered significant attention in recent years regarding its organic matter enrichment characteristics. This study conducted detailed observations via scanning electron microscopy (SEM) and optical microscopy to clarify the differences in the types and assemblages of hydrocarbon-generating organisms across Permian shale formations in Northwestern Sichuan, as well as to determine the characteristics of organic matter sources. The types and combinations of hydrocarbon-generating organisms in the Gufeng Formation, Wujiaping Formation, and Dalong Formation in Northwestern Sichuan are systematically summarized. Based on this information, the primary sources of organic matter in the Permian shale were analyzed. Hydrocarbon-generating organisms in the Permian shales of the study area are predominantly acritarchs (a type of planktonic algae), followed by higher plants and green algae. In the Gufeng Formation, acritarchs constituted the vast majority of hydrocarbon-generating organisms, with smaller amounts of higher plants and green algae. At the bottom of the Wujiaping Formation, the relative acritarch content decreases significantly, while that of higher plants substantially increases. In the Dalong Formation, acritarchs regain dominance, and higher plants decline, resembling the Gufeng Formation in microorganism composition. The relative content of green algae shows minimal variation across all layers. Overall, the organic matter sources of Permian shale in the study area were mainly acritarchs (derived from planktonic algae), followed by green algae, and terrestrial higher plants. During the Gufeng Formation period, the sea level was relatively high. The Kaijiang–Liangping Trough in Northwestern Sichuan was generally a siliceous deep shelf. The main source of organic matter was aquatic planktonic algae, containing a small amount of terrigenous input. At the bottom of the Wujiaping Formation, the sea level was relatively low, resulting in the overall coastal marsh environment of the Kaijiang–Liangping Trough, which was characterized by mixed organic matter sources, due to an increase in terrigenous organic matter content. The sedimentary environment and organic matter sources of the Dalong Formation were similar to those of the Gufeng Formation. This research can provide a theoretical basis for exploration and development of Permian shale gas. Full article

In order to clarify the pore evolution and coupling characteristics with hydrocarbon charging in the deep-buried ultra-tight sandstone reservoirs of the second member of Xujiahe Formation (hereinafter referred to as the Xu 2 Member) on the eastern slope of the Western Sichuan Depression, this study integrates burial history and thermal history with analytical methods including core observation, cast thin section analysis, scanning electron microscopy, carbon-oxygen isotope analysis, and fluid inclusion homogenization temperature measurements. The Xu 2 Member reservoirs are predominantly composed of lithic sandstones and quartz-rich sandstones, with authigenic quartz and carbonates as the main cementing materials. The reservoir spaces are dominated by intragranular dissolution pores. The timing of reservoir densification varies among different submembers. The upper submember underwent compaction during the Middle-Late Jurassic period due to the high ductility of mudstone clasts and other compaction-resistant components. The middle-lower submembers experienced densification in the Late Jurassic period. Late Cretaceous tectonic uplift induced fracture development, which enhanced dissolution in the middle-lower submembers, increasing reservoir porosity to approximately 5%. Two distinct phases of hydrocarbon charging are identified in the Xu 2 Member. The earlier densification of the upper submember created unfavorable conditions for hydrocarbon accumulation. In contrast, the middle-lower submembers received hydrocarbon charging prior to reservoir densification, providing favorable conditions for natural gas enrichment and reservoir formation. Three sweet-spot reservoir development patterns are recognized: paleo-structural trap + (internal source rock) + source-connected fracture assemblage type, paleo-structural trap + internal source rock + late-stage fracture assemblage type, and paleo-structural trap + (internal source rock) + source-connected fracture + late-stage fracture assemblage type. Full article

The lacustrine mudstones and shales of the Triassic Yanchang Formation in the Ordos Basin serve as critical hydrocarbon source rocks. However, previous studies predominantly focus on individual lithologies, with comparative investigations into the sedimentary environments of dark mudstones and black shales remaining relatively limited. The study systematically compares sedimentary environment parameters (e.g., paleoclimate, paleosalinity, paleoredox conditions, paleowater depth, and paleoproductivity characteristics) between mudstones and shales, and how these distinct environmental factors governed the differential enrichment mechanisms of organic matter within the depositional aquatic system has been elucidated. Geochemical proxies (e.g., CIA, Sr/Cu, Rb/Sr, Sr/Ba, V/Ni, U/Th, V/Cr, Rb/Zr, P/Ti, Cu/Ti) reveal marked contrasts: In comparison with the Chang 7 and Chang 8 dark mudstones, the Chang 7 black shales exhibit (1) warmer–humid paleoclimatic regimes, (2) higher paleosalinity, (3) intensely anoxic conditions, (4) deeper paleowater depth, and (5) elevated paleoproductivity. These environmental divergences directly govern the significant total organic carbon content disparity between black shales and dark mudstones. Organic enrichment in the Chang 7 dark mudstones and black shales is primarily controlled by paleoproductivity and paleoredox conditions, with secondary influences from paleoclimate and paleowater depth. Based on the above studies, this research established a differential organic matter enrichment model. This research is of significant importance for guiding oil and gas exploration and development in the Ordos Basin. Full article

The Sichuan Basin is a key area for shale gas energy exploration in China. However, the pore evolution mechanism and accumulation effect of the Lower Jurassic continental shale gas in the northeastern Sichuan Basin remain poorly understood. In this study, the pore structure characteristics of shale reservoirs and the dynamic accumulation and evolution of shale gas in the northern Fuling and Yuanba areas were systematically analyzed by adsorption experiments, high-pressure mercury injection joint measurement, and thermal simulation experiments. The results indicate the following: (1) The continental shale in the study area is predominantly composed of mesopores (10–50 nm), which account for approximately 55.21% of the total pore volume, followed by macropores (5–50 μm) contributing around 35.15%. Micropores exhibit the lowest proportion, typically less than 10%. Soluble minerals such as clay minerals and calcite significantly promote pore development, while soluble organic matter may block small pores during hydrocarbon generation, which facilitates the enrichment of free gas. (2) The thermal simulation experiment reveals that pore evolution can be divided into two distinct stages. Prior to 450 °C, hydrocarbon generation leads to a reduction in pore volume due to the compaction and transformation of organic matter. After 450 °C, organic matter undergoes cracking processes accompanied by the formation of shrinkage fractures, resulting in the development of new macropores and a significant increase in pore volume. This indicates that thermal energy input during the thermal evolution stage plays a key role in reservoir reconstruction. (3) The early Jurassic sedimentary environment controls the enrichment of organic matter, and the Cretaceous is the key period of hydrocarbon accumulation. Hydrocarbon generation and diagenesis synergistically promote the formation of gas reservoirs. The Cenozoic tectonic activity adjusted the distribution of gas reservoirs, and finally formed the enrichment model with the core of source–reservoir–preservation dynamic matching. For the first time, combined with dynamic thermal simulation experiments, this study clarifies the stage characteristics of pore evolution of continental shale and identifies the main controlling factors of shale gas accumulation in the Lower Jurassic in northeastern Sichuan, which provides a theoretical basis for continental shale gas exploration and energy resource development, offering important guidance for optimizing the selection of exploration target areas. Full article

The third member of the Shahejie Formation (Es₃) in Dongying Sag is noteworthy for its abundance of laminated shale, considerable thickness, and high organic matter content, with carbonate interbeds playing a crucial role in reservoir properties. The salinity and pH of water influence the change of sedimentary environment and the mineral composition of sediment, thereby affecting the distribution characteristics of carbonate interbeds. Based on geochemical data from 8721 samples in the Dongying Sag, this study systematically analyzed the salinity and pH characteristics. This study is the first to develop an environmental zoning framework based on aqueous medium characteristics of aqueous media, and the favorable shale oil enrichment areas in Es₃ were identified by integrating carbonate mineral content analysis. The results showed that the lower part of Es₃ is dominated by a zone with high salinity–middle pH, and middle salinity–high pH with rich carbonate. Combining the development of carbonate interbeds, it is speculated that the sweet spots in Es₃ are high salinity–middle pH and middle salinity–high pH. The favorable areas are concentrated in the lower part of Es₃, including the western and northeastern parts of the Lijin Sub-Sag and the northern gentle slope of Guangrao. It provides a novel perspective on shale oil exploration through lacustrine environmental zonation. Full article

The Minghuazhen Formation in the Cangdong Sag of the Bohai Bay Basin is a key sedimentary unit for investigating regional provenance evolution, paleoclimate variations, and hydrocarbon potential in Eastern China. This study integrates mineralogical and geochemical analyses to explore sedimentary characteristics. Techniques include X-ray diffraction (XRD), major/trace element compositions, rare earth element (REE) distributions, and organic carbon content. XRD data and elemental ratios (e.g., Al/Ti, Zr/Sc) suggest a predominant felsic provenance, sourced from acidic magmatic rocks. The enrichment with light rare earth elements (LREE: La–Eu) and notable negative Eu anomalies in the REE patterns support the interpretation of a provenance from the Taihangshan and Yanshan Orogenic Belts. Geochemical proxies, such as the Chemical Index of Alteration (CIA) and trace element ratios (e.g., U/Th, V/Cr, Ni/Co), indicate a warm and humid depositional environment, characterized by predominantly oxic freshwater conditions. Organic geochemical parameters, including total organic carbon (TOC), total nitrogen (TN), and C/N ratios, suggest that organic matter primarily originates from aquatic algae and plankton, with C/N values predominantly below 10 and a strong correlation between TOC and TN. The weak correlation between TOC and total carbon (TC) indicates that the organic carbon is mainly biological in origin rather than carbonate-derived. Although the warm and humid climate promoted the production of organic matter, the prevailing oxic conditions hindered its preservation, resulting in a relatively low hydrocarbon generation potential within the Minghuazhen Formation of the Cangdong Sag. These findings provide new insights into the sedimentary evolution and hydrocarbon potential of the Bohai Bay Basin. Full article