Search Results (2,714)

Background: Epigenomic instability accelerates mutations in tumor suppressor genes and oncogenes, contributing to malignant transformation. Histone modifications, particularly methylation and acetylation, significantly influence tumor biology, with chromo-, bromo-, and Tudor domain-containing proteins mediating these changes. This study investigates how genes encoding these domain-containing proteins affect colorectal cancer (CRC) prognosis. Methods: Using CRC data from the GSE39582 and TCGA datasets, we identified domain-related genes via GeneCards and developed a prognostic signature using LASSO-COX regression. Patients were classified into high- and low-risk groups, and comparisons were made across survival, clinical features, immune cell infiltration, immunotherapy responses, and drug sensitivity predictions. Single-cell analysis assessed gene expression in different cell subsets. Results: Four domain-related genes (AKAP1, ORC1, CHAF1A, and UHRF2) were identified as a prognostic signature. Validation confirmed their prognostic value, with significant differences in survival, clinical features, immune patterns, and immunotherapy responses between the high- and low-risk groups. Drug sensitivity analysis revealed top candidates for CRC treatment. Single-cell analysis showed varied expression of these genes across cell subsets. Conclusions: This study presents a novel prognostic signature based on domain-related genes that can predict CRC severity and offer insights into immune dynamics, providing a promising tool for personalized risk assessment in CRC. Full article

The early detection of liver cirrhosis (LC) is crucial due to its high morbidity and mortality in advanced stages. Reliable, non-invasive diagnostic tools are essential for timely intervention. Exhaled human breath, reflecting metabolic changes, offers significant potential for disease diagnosis. This paper focuses on the emerging role of sensor array-based volatile organic compounds (VOCs) analysis of exhaled breath, particularly using electronic nose (e-nose) technology to differentiate LC patients from healthy controls (HCs). This study included 55 participants: 27 LC patients and 28 HCs. Sensor’s measurement data were analyzed using machine learning techniques, such as principal component analysis (PCA), discriminant function analysis (DFA), and support vector machines (SVMs) that were utilized to uncover meaningful patterns and facilitate accurate classification of sensor-derived information. The diagnostic accuracy was thoroughly assessed through receiver operating characteristic (ROC) curve analysis, with specific emphasis on assessing sensitivity and specificity metrics. The e-nose effectively distinguished LC from HC, with PCA explaining 92.50% variance and SVMs achieving 100% classification accuracy. This study demonstrates the significant potential of e-nose technology towards VOCs analysis in exhaled breath, as a valuable tool for LC diagnosis. It also explores feature extraction methods and suitable algorithms for effectively distinguishing between LC patients and controls. This research provides a foundation for advancing breath-based diagnostic technologies for early detection and monitoring of liver cirrhosis. Full article

A longstanding ambiguity surrounds the operationalization of consciousness in artificial systems, complicated by the philosophical and cultural weight of subjective experience. This work examines whether cognitive architectures may be designed to support a functionally explicit form of artificial consciousness, focusing not on the replication of phenomenology, but rather on measurable, technically realizable introspective mechanisms. Drawing on a critical review of foundational and contemporary literature, this study articulates a conceptual and methodological shift: from investigating the experiential perspective of agents (“what it is like to be a bat”) to analyzing the informational, self-regulatory, and adaptive structures that enable purposive behavior. The approach combines theoretical analysis with a comparative review of major cognitive architectures, evaluating their capacity to implement access consciousness and internal monitoring. Findings indicate that several state-of-the-art systems already display core features associated with functional consciousness—such as self-explanation, context-sensitive adaptation, and performance evaluation—without invoking subjective states. These results support the thesis that cognitive engineering may progress more effectively by focusing on operational definitions of consciousness that are amenable to implementation and empirical validation. In conclusion, this perspective enables the development of artificial agents capable of autonomous reasoning and self-assessment, grounded in technical clarity rather than speculative constructs. Full article

This study investigates eye movement patterns as indicators of text complexity in Arabic, focusing on the comparative analysis of Classical Arabic (CA) and Modern Standard Arabic (MSA) text. Using the AraEyebility corpus, which contains eye-tracking data from readers of both CA and MSA text, we examined differences in fixation patterns, regression rates, and overall reading behavior between these two forms of Arabic. Our analyses revealed significant differences in eye movement metrics between CA and MSA text, with CA text consistently eliciting more fixations, longer fixation durations, and more frequent revisits. Multivariate analysis confirmed that language type has a significant combined effect on eye movement patterns. Additionally, we identified different relationships between text features and eye movements for CA versus MSA text, with sentence-level features emerging as significant predictors across both language types. Notably, we observed an interaction between language type and readability level, with readers showing less sensitivity to readability variations in CA text compared to MSA text. These findings contribute to our understanding of how historical language evolution affects reading behavior and have practical implications for Arabic language education, publishing, and assessment. The study demonstrates the value of eye movement analysis for understanding text complexity in Arabic and highlights the importance of considering language-specific features when studying reading processes. Full article

Background: Accurate diagnosis of acute appendicitis in children remains challenging due to variable presentations and limitations of existing clinical scoring systems. While machine learning (ML) offers a promising approach to enhance diagnostic precision, most prior studies have been limited by small sample sizes, single-center data, or a lack of external validation. Methods: This prospective, multicenter study included 8586 pediatric patients to develop a machine learning-based diagnostic model using routinely available clinical and hematological parameters. A separate, prospectively collected external validation cohort of 3000 patients was used to assess model performance. The Random Forest algorithm was selected based on its superior performance during model comparison. Diagnostic accuracy, sensitivity, specificity, Area Under Curve (AUC), and calibration metrics were evaluated and compared with traditional scoring systems such as Pediatric Appendicitis Score (PAS), Alvarado, and Appendicitis Inflammatory Response Score (AIRS). Results: The ML model outperformed traditional clinical scores in both development and validation cohorts. In the external validation set, the Random Forest model achieved an AUC of 0.996, accuracy of 0.992, sensitivity of 0.998, and specificity of 0.993. Feature-importance analysis identified white blood cell count, red blood cell count, and mean platelet volume as key predictors. Conclusions: This large, prospectively validated study demonstrates that a machine learning-based scoring system using commonly accessible data can significantly improve the diagnosis of pediatric appendicitis. The model offers high accuracy and clinical interpretability and has the potential to reduce diagnostic delays and unnecessary imaging. Full article

This work illustrates the application of the “First-Order Features Adjoint Sensitivity Analysis Methodology for Neural Integro-Differential Equations of Fredholm-Type” (1st-FASAM-NIDE-F) and the “Second-Order Features Adjoint Sensitivity Analysis Methodology for Neural Integro-Differential Equations of Fredholm-Type” (2nd-FASAM-NIDE-F) to a paradigm heat transfer model. This physically based heat transfer model has been deliberately constructed so that it can be represented either by a neural integro-differential equation of a Fredholm type (NIDE-F) or by a conventional second-order “neural ordinary differential equation (NODE)” while admitting exact closed-form solutions/expressions for all quantities of interest, including state functions and first-order and second-order sensitivities. This heat transfer model enables a detailed comparison of the 1st- and 2nd-FASAM-NIDE-F versus the recently developed 1st- and 2nd-FASAM-NODE methodologies, highlighting the considerations underlying the optimal choice for cases where the neural net of interest is amenable to using either of these methodologies for its sensitivity analysis. It is shown that the 1st-FASAM-NIDE-F methodology enables the most efficient computation of exactly determined first-order sensitivities of the decoder response with respect to the optimized NIDE-F parameters, requiring a single “large-scale” computation for solving the 1st-Level Adjoint Sensitivity System (1st-LASS), regardless of the number of weights/parameters underlying the NIDE-F decoder, hidden layers, and encoder. The 2nd-FASAM-NIDE-F methodology enables the computation, with unparalleled efficiency, of the second-order sensitivities of decoder responses with respect to the optimized/trained weights. Full article

Background/Objectives: Postoperative deep vein thrombosis (DVT) is a common and serious complication after tibial fracture surgery. This study aimed to develop and evaluate machine learning (ML) models to predict the occurrence of DVT following tibia fracture surgery. Methods: A retrospective analysis was conducted on patients who had undergone surgery for isolated tibial fractures. A total of 42 predictive models were developed using combinations of six ML algorithms—logistic regression, support vector machine, random forest, extreme gradient boosting, Light Gradient Boosting Machine (LightGBM), and neural networks—and seven feature selection methods, including SHapley Additive exPlanations (SHAP), Least Absolute Shrinkage and Selection Operator (LASSO), Boruta, recursive feature elimination, univariate filtering, and full-variable inclusion. Model performance was assessed based on discrimination, quantified by the area under the receiver operating characteristic curve (AUC-ROC), and calibration, measured using Brier scores, with internal validation performed via bootstrapping. Results: Of 471 patients, 80 (17.0%) developed postoperative DVT. The ML models achieved high overall accuracy in predicting DVT. Twenty-four models showed similarly excellent discrimination (pairwise AUC comparisons, p > 0.05). The top-performing model (random forest with RFE) attained an AUC of ~0.99, while several others (including LightGBM and SVM-based models) also reached AUC values in the 0.97–0.99 range. Notably, support vector machine models paired with Boruta or LASSO feature selection demonstrated the best calibration (lowest Brier scores), indicating reliable risk estimation. The final selected SVM models achieved high specificity (≥95%) with moderate sensitivity (~75–80%) for DVT detection. Conclusions: ML models demonstrated high accuracy in predicting postoperative DVT following tibial fracture surgery. Support vector machine-based models showed particularly favorable discrimination and calibration. These results suggest the potential utility of ML-based risk stratification to guide individualized prophylaxis, warranting further validation in prospective clinical settings. Full article

Background: Leigh’s Disease is a rare mitochondrial disorder primarily affecting the central nervous system, with frequent secondary cardiac manifestations such as hypertrophic and dilated cardiomyopathies. Early detection of cardiac complications is crucial for patient management, but manual interpretation of cardiac MRI is labour-intensive and subject to inter-observer variability. Methodology: We propose an integrated deep learning framework using cardiac MRI to automate the detection of cardiac abnormalities associated with Leigh’s Disease. Four CNN architectures—Inceptionv3, a custom 3-layer CNN, DenseNet169, and EfficientNetB2—were trained on preprocessed MRI data (224 × 224 pixels), including left ventricular segmentation, contrast enhancement, and gamma correction. Morphological features (area, aspect ratio, and extent) were also extracted to aid interpretability. Results: EfficientNetB2 achieved the highest test accuracy (99.2%) and generalization performance, followed by DenseNet169 (98.4%), 3-layer CNN (95.6%), and InceptionV3 (94.2%). Statistical morphological analysis revealed significant differences in cardiac structure between Leigh’s and non-Leigh’s cases, particularly in area (212,097 vs. 2247 pixels) and extent (0.995 vs. 0.183). The framework was validated using ROC (AUC = 1.00), Brier Score (0.000), and cross-validation (mean sensitivity = 1.000, std = 0.000). Feature embedding visualisation using PCA, t-SNE, and UMAP confirmed class separability. Grad-CAM heatmaps localised relevant myocardial regions, supporting model interpretability. Conclusions: Our deep learning-based framework demonstrated high diagnostic accuracy and interpretability in detecting Leigh’s disease-related cardiac complications. Integrating morphological analysis and explainable AI provides a robust and scalable tool for early-stage detection and clinical decision support in rare diseases. Full article

This work presents the “First-Order Features Adjoint Sensitivity Analysis Methodology for Neural Integro-Differential Equations of Fredholm-Type” (1st-FASAM-NIDE-F) and the “Second-Order Features Adjoint Sensitivity Analysis Methodology for Neural Integro-Differential Equations of Fredholm-Type” (2nd-FASAM-NIDE-F). It is shown that the 1st-FASAM-NIDE-F methodology enables the most efficient computation of exactly-determined first-order sensitivities of decoder response with respect to the optimized NIDE-F parameters, requiring a single “large-scale” computation for solving the 1st-Level Adjoint Sensitivity System (1st-LASS), regardless of the number of weights/parameters underlying the NIDE-F decoder, hidden layers, and encoder. The 2nd-FASAM-NIDE-F methodology enables the computation, with unparalleled efficiency, of the second-order sensitivities of decoder responses with respect to the optimized/trained weights, requiring only as many large-scale computations for solving the 2nd-Level Adjoint Sensitivity System (2nd-LASS) as there are non-zero feature functions of parameters. The application of both the 1st-FASAM-NIDE-F and the 2nd-FASAM-NIDE-F methodologies is illustrated in an accompanying work (Part II) by considering a paradigm heat transfer model. Full article

The compressive capacity of helical anchors constitutes a pivotal performance parameter in geotechnical design. To precisely predict the compressive bearing behavior of helical anchors in aeolian sand, this study integrates in situ testing with finite element numerical analysis to systematically elucidate the non-linear evolution of its load-bearing mechanisms. The XGBoost algorithm enabled the rigorous quantification of the governing geometric features of compressive capacity, culminating in a computational framework for the bearing capacity factor (N_q) and lateral earth pressure coefficient (K_u). The research findings demonstrate the following: (1) Compressive capacity exhibits significant enhancement with increasing helix diameter yet displays limited sensitivity to helix number. (2) Load–displacement curves progress through three distinct phases—initial quasi-linear, intermediate non-linear, and terminal quasi-linear stages—under escalating pressure. (3) At embedment depths of H < 5D, tensile capacity diminishes by approximately 80% relative to compressive capacity, manifesting as characteristic shallow anchor failure patterns. (4) When H ≥ 5D, stress redistribution transitions from bowl-shaped to elliptical contours, with ≤10% divergence between uplift/compressive capacities, establishing 5D as the critical threshold defining shallow versus deep anchor behavior. (5) The helix spacing ratio (S/D) governs the failure mode transition, where cylindrical shear (CS) dominates at S/D ≤ 4, while individual bearing (IB) prevails at S/D > 4. (6) XGBoost feature importance analysis confirms internal friction angle, helix diameter, and embedment depth as the three parameters exerting the most pronounced influence on capacity. (7) The proposed computational models for N_q and K_u demonstrate exceptional concordance with numerical simulations (mean deviation = 1.03, variance = 0.012). These outcomes provide both theoretical foundations and practical methodologies for helical anchor engineering in aeolian sand environments. Full article

This study proposes a hybrid approach combining threshold-based algorithm and deep learning to detect four major gait events—initial contact (IC), toe-off (TO), opposite initial contact (OIC), and opposite toe-off (OTO)—using only a smartphone’s built-in inertial sensor placed in the user’s pocket. The algorithm enables estimation of spatiotemporal gait parameters such as cadence, stride length, loading response (LR), pre-swing (PSw), single limb support (SLS), double limb support (DLS), and swing phase and symmetry. Gait data were collected from 20 healthy individuals and 13 hemiparetic stroke patients. To reduce sensitivity to sensor orientation and suppress noise, sum vector magnitude (SVM) features were extracted and filtered using a second-order Butterworth low-pass filter at 3 Hz. A deep learning model was further compressed using knowledge distillation, reducing model size by 96% while preserving accuracy. The proposed method achieved error rates in event detection below 2% of the gait cycle for healthy gait and a maximum of 4.4% for patient gait in event detection, with corresponding parameter estimation errors also within 4%. These results demonstrated the feasibility of accurate and real-time gait monitoring using a smartphone. In addition, statistical analysis of gait parameters such as symmetry and DLS revealed significant differences between the normal and patient groups. While this study is not intended to provide or guide rehabilitation treatment, it offers a practical means to regularly monitor patients’ gait status and observe gait recovery trends over time. Full article

Barnyard grass is a major noxious weed in paddy fields. Accurate and efficient identification of barnyard grass is crucial for precision field management. However, existing deep learning models generally suffer from high parameter counts and computational complexity, limiting their practical application in field scenarios. Moreover, the morphological similarity, overlapping, and occlusion between barnyard grass and rice pose challenges for reliable detection in complex environments. To address these issues, this study constructed a barnyard grass detection dataset using high-resolution images captured by a drone equipped with a high-definition camera in rice experimental fields in Haicheng City, Liaoning Province. A lightweight field barnyard grass detection model, YOLOv8n-SSDW, was proposed to enhance detection precision and speed. Based on the baseline YOLOv8n model, a novel Separable Residual Coord Conv (SRCConv) was designed to replace the original convolution module, significantly reducing parameters while maintaining detection accuracy. The Spatio-Channel Enhanced Attention Module (SEAM) was introduced and optimized to improve sensitivity to barnyard grass edge features. Additionally, the lightweight and efficient Dysample upsampling module was incorporated to enhance feature map resolution. A new WIoU loss function was developed to improve bounding box classification and regression accuracy. Comprehensive performance analysis demonstrated that YOLOv8n-SSDW outperformed state-of-the-art models. Ablation studies confirmed the effectiveness of each improvement module. The final fused model achieved lightweight performance while improving detection accuracy, with a 2.2% increase in mAP_50, 3.8% higher precision, 0.6% higher recall, 10.6% fewer parameters, 9.8% lower FLOPs, and an 11.1% reduction in model size compared to the baseline. Field tests using drones combined with ground-based computers further validated the model’s robustness in real-world complex paddy environments. The results indicate that YOLOv8n-SSDW exhibits excellent accuracy and efficiency. This study provides valuable insights for barnyard grass detection in rice fields. Full article

Aflatoxin B₁ (AFB₁) contamination in corn silage poses significant risks to livestock and human health. This study developed a non-destructive detection method for AFB₁ using color-sensitive arrays (CSAs). Twenty self-developed CSAs were employed to react with samples, with reflectance spectra collected using a portable spectrometer. Spectral data were optimized through seven preprocessing methods, including Standard Normal Variate (SNV), Multiplicative Scatter Correction (MSC), first-order derivative (1st D), second-order derivative (2nd D), wavelet denoising, and their combinations. Key variables were selected using five feature selection algorithms: Competitive Adaptive Reweighted Sampling (CARS), Principal Component Analysis (PCA), Random Forest (RF), Uninformative Variable Elimination (UVE), and eXtreme Gradient Boosting (XGBoost). Five machine learning models were constructed: Light Gradient Boosting Machine (LightGBM), XGBoost, Support Vector Regression (SVR), RF, and K-Nearest Neighbor (KNN). The results demonstrated significant AFB₁-responsive characteristics in three dyes: (2,3,7,8,12,13,17,18-octaethylporphynato)chloromanganese(III) (Mn(OEP)Cl), Bromocresol Green, and Cresol Red. The combined 1st D-PCA-KNN model showed optimal prediction performance, with determination coefficient ($R_p^2$ = 0.87), root mean square error (RMSEP = 0.057), and relative prediction deviation (RPD = 2.773). This method provides an efficient solution for silage AFB₁ monitoring. Full article

Expressive imitation in the performing arts is typically trained through animal behavior imitation, aiming not only to reproduce action trajectories but also to recreate rhythm, style and emotional states. However, evaluation of such animal imitation behaviors relies heavily on teachers’ subjective judgments, lacking structured criteria, exhibiting low inter-rater consistency and being difficult to quantify. To enhance the objectivity and interpretability of the scoring process, this study develops a machine learning and structured pose data-based auxiliary evaluation framework for imitation quality. The proposed framework innovatively constructs three types of feature sets, namely baseline, ablation, and enhanced, and integrates recursive feature elimination with feature importance ranking to identify a stable and interpretable set of core structural features. This enables the training of machine learning models with strong capabilities in structured modeling and sensitivity to informative features. The analysis of the modeling results indicates that temporal–rhythm features play a significant role in score prediction and that only a small number of key feature values are required to model teachers’ ratings with high precision. The proposed framework not only lays a methodological foundation for standardized and AI-assisted evaluation in performing arts education but also expands the application boundaries of computer vision and machine learning in this field. Full article

Light Detection and Ranging(LiDAR)-inertial simultaneous localization and mapping (SLAM) is a critical component in multi-sensor autonomous navigation systems, providing both accurate pose estimation and detailed environmental understanding. Despite its importance, existing optimization-based LiDAR-inertial SLAM methods often face key limitations: unreliable feature extraction, sensitivity to noise and sparsity, and the inclusion of redundant or low-quality feature correspondences. These weaknesses hinder their performance in complex or dynamic environments and fail to meet the reliability requirements of autonomous systems. To overcome these challenges, we propose a novel and accurate LiDAR-inertial SLAM framework with three major contributions. First, we employ a robust multi-category feature extraction method based on principal component analysis (PCA), which effectively filters out noisy and weakly structured points, ensuring stable feature representation. Second, to suppress outlier correspondences and enhance pose estimation reliability, we introduce a coarse-to-fine two-stage feature correspondence selection strategy that evaluates geometric consistency and structural contribution. Third, we develop an adaptive weighted pose estimation scheme that considers both distance and directional consistency, improving the robustness of feature matching under varying scene conditions. These components are jointly optimized within a sliding-window-based factor graph, integrating LiDAR feature factors, IMU pre-integration, and loop closure constraints. Extensive experiments on public datasets (KITTI, M2DGR) and a custom-collected dataset validate the proposed method’s effectiveness. Results show that our system consistently outperforms state-of-the-art approaches in accuracy and robustness, particularly in scenes with sparse structure, motion distortion, and dynamic interference, demonstrating its suitability for reliable real-world deployment. Full article