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21 pages, 9852 KB  
Article
Multivariate Statistical Analysis of Solidago canadensis L. Essential Oil and Its Antifungal Mechanism Against Mulberry Sclerotinia Diseases
by Jia-Xin Yang, Zhen-Zhen Lu, Sen Chen, Shi-Yi Lin, Xiao-Hui Yao, Tao Chen and Dong-Yang Zhang
Int. J. Mol. Sci. 2026, 27(1), 49; https://doi.org/10.3390/ijms27010049 - 20 Dec 2025
Viewed by 281
Abstract
Ciboria shiraiana (C. shiraiana), a pathogenic fungus, is a major threat to mulberry trees, causing mulberry sclerotinia diseases. Current control strategies primarily rely on chemical pesticides, whose long-term use leads to adverse effects such as pesticide residues, environmental pollution, and pathogen [...] Read more.
Ciboria shiraiana (C. shiraiana), a pathogenic fungus, is a major threat to mulberry trees, causing mulberry sclerotinia diseases. Current control strategies primarily rely on chemical pesticides, whose long-term use leads to adverse effects such as pesticide residues, environmental pollution, and pathogen resistance. This study aimed to develop a green pesticide derived from the essential oil (EOs) of Solidago canadensis L. (S. canadensis L.) and to analyze its antifungal mechanism. SLEOs were extracted from flowers, leaves, and stems of S. canadensis L. via hydro-distillation. Their chemical composition was analyzed by GC-MS. Multivariate statistical analysis was used to assess compositional differences among SLEOs from various plant parts and evaluate the correlation between their chemical components and antifungal efficacy. The antifungal mechanism of SLEOs against C. shiraiana was investigated using an integrated approach combining transcriptomics with physiological and biochemical analyses. The EO yield varied with plant part: flowers yielded the most (1.00% ± 0.07%), followed by leaves (0.76% ± 0.04%) and stems (0.05% ± 0.01%). Flower EOs (FEOs) strongly inhibited C. shiraiana, with an EC50 value of 0.642 μL/mL. α-pinene and myrcene showed the highest correlation with antifungal activity. Transcriptomic and physiological data revealed that SLEOs compromise cell wall and membrane integrity, infiltrate cells, and trigger leakage of intracellular contents. Additionally, SLEOs inhibited activities of antioxidant enzymes (SOD, CAT, and POD), leading to intracellular ROS accumulation, oxidative stress, lipid peroxidation, and DNA damage. SLEOs constitute a promising natural and environmentally sustainable antifungal agent. Their activity is linked to specific components and a multi-target mechanism involving membrane disruption and oxidative stress induction. This study provides a foundation for developing plant-based agents to manage mulberry sclerotinia diseases. Full article
(This article belongs to the Section Molecular Plant Sciences)
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20 pages, 1666 KB  
Article
Analyses of Antioxidative Response in Tomato (Solanum lycopersicum L.) Grown with Biochar and PGPMs
by Silvia Carlo, Marta Trazza, Luca Pagano and Marta Marmiroli
Antioxidants 2025, 14(12), 1482; https://doi.org/10.3390/antiox14121482 - 10 Dec 2025
Viewed by 464
Abstract
Solanum lycopersicum plants were grown in pots amended with biochar and PGPMs (plant growth-promoting microorganisms: Pseudomonas fluorescens and Azotobacter chroococcum), applied singularly and in combination, for three months, after which plants and soils were collected, divided into treatment groups based on organs, [...] Read more.
Solanum lycopersicum plants were grown in pots amended with biochar and PGPMs (plant growth-promoting microorganisms: Pseudomonas fluorescens and Azotobacter chroococcum), applied singularly and in combination, for three months, after which plants and soils were collected, divided into treatment groups based on organs, and analyzed. The following biochemical markers were studied: cellular respiration, shoot fresh and dry weight, root fresh weight, photosynthetic pigments (chlorophyll a, chlorophyll b, and carotenoids), membrane lipid peroxidation, proline content, total antioxidant capacity (DPPH and ABTS assay), hydrogen peroxide, ascorbic acid, total phenolic content, enzymatic activity (SOD, POD, CAT, and APX), total soluble sugar content, and total protein content. Also, soil parameters, such as pH, EC, total enzymatic activity, active carbon, and respiration, were measured. While biochar alone induced root H2O2 accumulation, its co-application with PGPMs turned this signal into a systemic trigger for defense, enhancing the antioxidant capacity and the production of proline, phenolics, and ascorbic acid without causing oxidative damage. At the soil level, microorganisms counteracted biochar’s inhibitory effects on enzymatic activity and intensified labile carbon use, indicating a more dynamic rhizosphere. Multivariate analysis confirmed that the combined treatment remodulated the plant–soil system, converting a stress factor into a resilience enhancer. This synergy underscores the role of biochar as an effective microbial carrier and PGPM consortia as bioactivators, together providing a powerful tool to prime crops against climate stress while preserving soil health. Full article
(This article belongs to the Special Issue Oxidative Stress and Antioxidant Defense in Crop Plants, 2nd Edition)
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16 pages, 2155 KB  
Article
Toxicological Evaluation and Antimicrobial Activity of a Natural Thymol–Eucalyptol-Based Mixture
by Boris Lira-Mejía, Luis Barrios-Arpi, Carlos Villaorduña, Tatiana Ancajima, José-Luis Rodríguez, Alejandro Romero, Víctor Puicón and Hugo Patiño
Toxics 2025, 13(10), 875; https://doi.org/10.3390/toxics13100875 - 14 Oct 2025
Viewed by 1367
Abstract
Currently, safe alternatives with very low toxicity and good antimicrobial activity are being sought to replace chemical compounds that can be harmful to animal and human health. For this reason, this study evaluated the safety and biofunctional microbiocidal potential of an extract composed [...] Read more.
Currently, safe alternatives with very low toxicity and good antimicrobial activity are being sought to replace chemical compounds that can be harmful to animal and human health. For this reason, this study evaluated the safety and biofunctional microbiocidal potential of an extract composed of thymol and eucalyptol. Toxicity tests showed low toxicity in both chickens (2000 mg/kg bw) and Artemia salina (EC50 = 2003 mg/L) and Daphnia magna (EC50 = 87 mg/L), indicating a safe usage profile. Oxidative stress biomarkers (nitrite and MDA) and antioxidant enzymes (SOD and catalase) improved in treated chickens at 20 days of age. The hematological and biochemical parameters of the treated birds showed normal values similar to those of the control group chickens, with better protein levels and lower AST levels. Histology of the kidney, intestine, and liver showed no changes in any group, confirming the absence of systemic adverse effects. At the molecular level, an improvement in the expression of tight junction proteins (claudin and occludin) was observed, suggesting a strengthening of the intestinal barrier integrity. Finally, the extract demonstrated an antimicrobial effect (E. coli, C. perfringens, Salmonella sp. and Pseudomonas sp.) comparable to that of organic acids commonly used as food preservatives, positioning it as a promising alternative in applications. Full article
(This article belongs to the Special Issue Mechanisms of Toxicity of Chemical Compounds and Natural Compounds)
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15 pages, 2808 KB  
Article
Extracellular Polymeric Substances Protect Chlorella sp. Against the Cadmium Stress
by Fangyuan Liu, Xingye Han, Zhengyang Wang, Xuefeng Zhao, Yibo Zhang and Hongmei Ge
Ecologies 2025, 6(4), 65; https://doi.org/10.3390/ecologies6040065 - 29 Sep 2025
Cited by 1 | Viewed by 1080
Abstract
Extracellular polymeric substances (EPS) are secreted by microalgae and contribute to protecting cells from damage induced by cadmium (Cd) exposure. However, the response mechanism of Chlorella sp. to Cd(II) stress as well as associated changes in the chemical properties (including functional groups and [...] Read more.
Extracellular polymeric substances (EPS) are secreted by microalgae and contribute to protecting cells from damage induced by cadmium (Cd) exposure. However, the response mechanism of Chlorella sp. to Cd(II) stress as well as associated changes in the chemical properties (including functional groups and composition) of soluble EPS (SL-EPS), loosely bound EPS (LB-EPS), and tightly bound EPS (TB- EPS) in this microalga, remain unclear. This study aimed to investigate the role of EPS in enabling Chlorella sp. to resist Cd(II) stress. The results demonstrated that Cd(II) stress resulted in a significant inhibition of algal, chlorophyll a (Chl a) contents, and maximum photochemical quantum yield (Fv/Fm) of Chlorella sp., with 7 d EC30 of 6 mg/L. Nevertheless, Cd(II) exposure significantly increased both superoxide dismutase (SOD) activity and EPS content. Fourier transform infrared (FTIR) spectroscopic analysis revealed that differences existed in the functional groups involved in Cd(II) binding across algal cell density, SL-EPS, LB-EPS, and TB-EPS. The carboxyl group was identified as the most prominent functional group and were found to play a crucial role in the adsorption of Cd(II). Additionally, Tryptophan-like protein substance in EPS may be the main component binding with Cd(II) in Chlorella sp. This study indicated that Chlorella sp. resisted Cd(II) stress by increasing SOD activity and EPS content, with protein-like substance containing tryptophan proteins in EPS which could also contribute to protection against Cd stress. Full article
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23 pages, 1799 KB  
Article
Extracellular Vesicles from Escherichia coli Strains of the Gut Microbiota Trigger Hepatic Antioxidant and Anti-Lipogenic Effects via the Gut-Liver Axis in Healthy Neonatal Rats
by Sergio Martínez-Ruiz, Josefa Badia and Laura Baldoma
Nutrients 2025, 17(19), 3066; https://doi.org/10.3390/nu17193066 - 25 Sep 2025
Viewed by 967
Abstract
Background: The gut-liver axis is essential for maintaining liver physiology, with the gut microbiota playing a central role in this bidirectional communication. Recent studies have identified microbiota-derived extracellular vesicles (EVs) as key mediators of inter-organ signaling. This study explored the impact of [...] Read more.
Background: The gut-liver axis is essential for maintaining liver physiology, with the gut microbiota playing a central role in this bidirectional communication. Recent studies have identified microbiota-derived extracellular vesicles (EVs) as key mediators of inter-organ signaling. This study explored the impact of EVs from two beneficial Escherichia coli strains, the probiotic EcN and the commensal EcoR12, on hepatic metabolism and oxidative stress in healthy neonatal rats. Methods: EVs were administered orally during the first 16 days of life, and blood and liver samples were collected on days 8 and 16. Results: The results demonstrated that EVs significantly reduced intestinal permeability, as evidenced by decreased plasma zonulin levels. In the liver, EVs enhanced redox homeostasis by downregulating CYP2E1 and upregulating key antioxidant genes (SOD1, CAT, GPX). Furthermore, the treatment shifted liver metabolism toward an anti-lipogenic profile by inducing fatty acid oxidation genes (PPARA, CPT1A) and suppressing genes involved in de novo lipogenesis (SREBP1C, ACC1, FASN, CNR1). Importantly, markers of hepatic inflammation remained unchanged, indicating the safety of the intervention. In vitro experiments using human HepG2 cells supported these findings, further validating the antioxidant and metabolic effects of the EVs. Conclusions: Our results underscore the role of microbiota-derived EVs as important mediators of hepatic metabolic programming in healthy individuals via the gut-liver axis and highlight their potential as therapeutic postbiotic agents for management of fatty liver diseases. Full article
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18 pages, 6968 KB  
Article
SOD-1/2 Involvement in the Antioxidant Molecular Events Occurring upon Complex Magnetic Fields Application in an In Vitro H2O2 Oxidative Stress-Induced Endothelial Cell Model
by Alessia Ricci, Susi Zara, Viviana di Giacomo, Marialucia Gallorini, Monica Rapino, Natalia Di Pietro, Alessandro Cipollina, Adriano Piattelli and Amelia Cataldi
Int. J. Mol. Sci. 2025, 26(17), 8600; https://doi.org/10.3390/ijms26178600 - 4 Sep 2025
Cited by 1 | Viewed by 1180
Abstract
Endothelial function plays a key role in tissue repair. Reactive Oxygen Species (ROS) production impairs tissue renewal and homeostasis. Complex Magnetic Fields (CMFs) have been attracting attention as a non-invasive tool to promote tissue regeneration, especially through angiogenic stimulation. The present study aims [...] Read more.
Endothelial function plays a key role in tissue repair. Reactive Oxygen Species (ROS) production impairs tissue renewal and homeostasis. Complex Magnetic Fields (CMFs) have been attracting attention as a non-invasive tool to promote tissue regeneration, especially through angiogenic stimulation. The present study aims to investigate CMF effect in an in vitro model of oxidative stress-stimulated Endothelial Cells (ECs). Cells were pre-treated with H2O2 to mimic an oxidative environment, followed by the application of three CMF programs repeated in two experimental sets: two consecutive cycles (two cycles) or two cycles spaced 24 h apart (T0+T24). Flow cytometry investigation shows that both CMF applications reduce ROS production, presumably promoting SODs proteins expression. Specifically, two cycles affect mitochondrial SOD-2 expression, which may promote cellular turnover by upregulating pro-apoptotic proteins, leading to mild cell death balanced with increased cell viability. T0+T24 application promotes cytosolic SOD-1 expression, which may influence the expression and release of antioxidant molecules, as evidenced by the increased protein levels of Akt/Nrf2 and the overall antioxidant activity measured post-treatment. In conclusion, ROS-induced EC dysfunction can be reverted by CMF application: 2 cycles could be applied when cellular renewal is required (such as in pathological wounds) while T0+T24 could be useful when an antioxidant and anti-inflammatory effect is needed (e.g., in edema or muscular lesions). Full article
(This article belongs to the Collection Feature Papers in “Molecular Biology”)
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15 pages, 4666 KB  
Article
Alleviation of Saline–Alkaline Stress in Alfalfa by a Consortium of Plant-Growth-Promoting Rhizobacteria
by Lingjuan Han, Yixuan Li, Zheng Ma, Bin Li, Yinping Liang, Peng Gao and Xiang Zhao
Plants 2025, 14(17), 2744; https://doi.org/10.3390/plants14172744 - 2 Sep 2025
Cited by 2 | Viewed by 1065
Abstract
Soil salinization critically threatens global agricultural productivity by impairing plant growth and soil fertility. This study investigated the potential of a consortium, comprising Acinetobacter calcoaceticus DP25, Staphylococcus epidermidis DP28, and Enterobacter hormaechei DP29, to enhance the saline–alkali tolerance of alfalfa and improve soil [...] Read more.
Soil salinization critically threatens global agricultural productivity by impairing plant growth and soil fertility. This study investigated the potential of a consortium, comprising Acinetobacter calcoaceticus DP25, Staphylococcus epidermidis DP28, and Enterobacter hormaechei DP29, to enhance the saline–alkali tolerance of alfalfa and improve soil properties. The experiments comprised five germination treatments (saline control, each strain alone, consortium) and three pot treatments (non-saline control, saline control, consortium). Under saline–alkali stress, co-inoculation with the consortium significantly (p < 0.05) increased alfalfa seed germination rates, emergence rates, and biomass (shoot and root dry weight), while promoting root development. Physiological analyses revealed that the bacterial consortium mitigated stress-induced damage by enhancing photosynthetic efficiency, chlorophyll content, and antioxidant enzyme activities (superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT)), while decreasing malondialdehyde (MDA) levels. Moreover, the inoculant improved osmoprotectant accumulation (soluble sugars, soluble proteins, and proline) and modulated soil properties by reducing pH and electrical conductivity (EC), while elevating nutrient availability and soil enzyme activities. Correlation and principal component analyses (PCA) confirmed strong associations among improved plant growth, physiological traits, and soil health. These findings demonstrate that the bacterial consortium effectively alleviates saline–alkali stress in alfalfa by improving soil health, offering a sustainable strategy for ecological restoration and improving agricultural productivity in saline–alkali regions. Full article
(This article belongs to the Special Issue Horticultural Plant Physiology and Molecular Biology—2nd Edition)
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12 pages, 543 KB  
Article
Microwave Extraction of Antioxidant Polysaccharides from Plantago depressa and Their Effects on SOD and GSH-Px in Drosophila melanogaster Model
by Chenqian Sun, Qian Liu, Xiaohua Yang, Lu Li, Yubin Wang, Keran Xu and Huafeng Zhang
Separations 2025, 12(8), 221; https://doi.org/10.3390/separations12080221 - 19 Aug 2025
Cited by 1 | Viewed by 783
Abstract
A microwave extraction method was developed to isolate antioxidant polysaccharides from Plantago depressa (psyllium), and the structure, free radical-scavenging ability, as well as in vivo antioxidant activity of psyllium polysaccharides were analyzed. The optimal condition for microwave extraction was as follows: duration of [...] Read more.
A microwave extraction method was developed to isolate antioxidant polysaccharides from Plantago depressa (psyllium), and the structure, free radical-scavenging ability, as well as in vivo antioxidant activity of psyllium polysaccharides were analyzed. The optimal condition for microwave extraction was as follows: duration of microwave radiation of 35 min, extraction temperature of 80 °C, and ratio of liquid to solid of 80:1 (mL/g). The yield of psyllium polysaccharides by microwave extraction was significantly higher than that by heating extraction (p < 0.05). The volumes of P. depressa samples notably increased after microwave extraction, which implied that microwave radiation might loosen the structure of cells and tissues of psyllium leaves and facilitate the exudation of target polysaccharides from leaf samples. The structure of polysaccharides was analyzed by infrared spectroscopy. The effective concentrations of psyllium polysaccharides scavenging DPPH and ABTS•+ radicals by 50% (EC50) were 0.20 and 0.10 mg/mL, respectively. Moreover, P. depressa polysaccharides increased activities of superoxide dismutase (SOD) and glutathione peroxidase (GSH-Px) in Drosophila melanogaster. In conclusion, microwave extraction seems to be an efficient method to isolate bioactive polysaccharides from P. depressa, which were a potential source of natural antioxidants. Full article
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18 pages, 1661 KB  
Article
Field-Based Assessment of Soil Salinity and Alkalinity Stress on Growth and Biochemical Responses in Eggplant (Solanum melongena L.)
by Eren Özden, Faruk Tohumcu and Serdar Sarı
Agronomy 2025, 15(8), 1945; https://doi.org/10.3390/agronomy15081945 - 12 Aug 2025
Viewed by 1422
Abstract
Soil salinity and sodicity are escalating global threats to agricultural productivity, severely limiting crop yield and quality. In the Igdir Plain of Türkiye, high summer temperatures, minimal precipitation, and a shallow groundwater table have intensified salinity-related challenges, currently affecting one-third of the arable [...] Read more.
Soil salinity and sodicity are escalating global threats to agricultural productivity, severely limiting crop yield and quality. In the Igdir Plain of Türkiye, high summer temperatures, minimal precipitation, and a shallow groundwater table have intensified salinity-related challenges, currently affecting one-third of the arable land. Despite the substantial impact of salinity stress on eggplant (Solanum melongena L.) production, studies addressing plant tolerance mechanisms under real field conditions remain limited. In this study, eggplant was cultivated in eight distinct soil classes under open-field conditions to evaluate the effects of soil salinity and saline-alkalinity on morphological, physiological, and biochemical traits. Increasing soil exchangeable sodium percentage (ESP) and electrical conductivity (ECe) levels significantly suppressed plant height, root length, stem diameter, and leaf area, along with over 90% reductions in shoot and root biomass. Salinity impaired the uptake of essential nutrients (Ca, K, P, and Fe), while promoting toxic Na+ accumulation in leaves. This ionic imbalance induced oxidative stress, as indicated by elevated malondialdehyde (MDA), hydrogen peroxide (H2O2), and antioxidant enzyme activities (SOD, CAT, APX), all of which were strongly correlated with proline accumulation. The results highlight a coordinated plant response under salinity stress but also reveal the insufficiency of natural defense mechanisms under high salinity levels. Unless supported by external interventions to improve stress resilience and ensure productivity, growing eggplant in saline–alkaline soils should be avoided. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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21 pages, 3115 KB  
Article
Inhibitory Effect of Bacillus velezensis dhm2 on Fusarium oxysporum f. sp. cucumerinum and Synergistic Activity of Crude Lipopeptide Extract with Chemical Fungicides
by Xinyu He, Haiming Duan, Xingyu Liu, Zhuangzhuang Li, Li Yu, Cheng Zhou, Wenjie Lu and Haibing Yu
Agriculture 2025, 15(16), 1730; https://doi.org/10.3390/agriculture15161730 - 12 Aug 2025
Cited by 1 | Viewed by 1130
Abstract
Fusarium oxysporum f. sp. cucumerium, a resilient saprophytic fungus, poses a significant risk to cucumber crops. The research investigated the suppressive impact of Bacillus velezensis dhm2 on this pathogen and the synergistic performance of its crude lipopeptide extract with synthetic fungicides. Strain [...] Read more.
Fusarium oxysporum f. sp. cucumerium, a resilient saprophytic fungus, poses a significant risk to cucumber crops. The research investigated the suppressive impact of Bacillus velezensis dhm2 on this pathogen and the synergistic performance of its crude lipopeptide extract with synthetic fungicides. Strain dhm2 inhibited the pathogen by 52.27% in confrontation culture. Its fermentation supernatant showed peak activity at 4 h bacterial age and 60 h fermentation duration, while the crude lipopeptide extract had an EC50 of 9.99 g L−1. Among the six chemical fungicides, prochloraz exhibited the highest toxicity, with an EC50 value of 0.03 μg mL−1. In all mixed combinations of the crude lipopeptide extract and chemical fungicides, there existed synergistic mixing ratios, particularly with difenoconazole (volume ratio 7:3, synergistic ratio 5.88) and propiconazole (7:3, 3.41), as confirmed by Wadley tests. Pot experiments revealed that the combined use of the crude lipopeptide extract and difenoconazole controlled cucumber Fusarium wilt by 80.95%. The mixture showed the highest SOD (315.76 U g−1 FW min−1), POD (281.63 U g−1 FW min−1), and CAT (23.39 U g−1 FW min−1), with increases over single treatments. This study provides an eco-friendly strategy for managing cucumber wilt, advocating reduced fungicide use via synergistic formulations. Full article
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17 pages, 7385 KB  
Article
Microbial Alliance of Paenibacillus sp. SPR11 and Bradyrhizobium yuanmingense PR3 Enhances Nitrogen Fixation, Yield, and Salinity Tolerance in Black Gram Under Saline, Nutrient-Depleted Soils
by Praveen Kumar Tiwari, Anchal Kumar Srivastava, Rachana Singh and Alok Kumar Srivastava
Nitrogen 2025, 6(3), 66; https://doi.org/10.3390/nitrogen6030066 - 7 Aug 2025
Viewed by 1203
Abstract
Salinity is a major abiotic stress limiting black gram (Vigna mungo) productivity, particularly in arid and semi-arid regions. Saline soils negatively impact plant growth, nodulation, nitrogen fixation, and yield. This study evaluated the efficacy of co-inoculating salt-tolerant plant growth-promoting bacteria Paenibacillus [...] Read more.
Salinity is a major abiotic stress limiting black gram (Vigna mungo) productivity, particularly in arid and semi-arid regions. Saline soils negatively impact plant growth, nodulation, nitrogen fixation, and yield. This study evaluated the efficacy of co-inoculating salt-tolerant plant growth-promoting bacteria Paenibacillus sp. SPR11 and Bradyrhizobium yuanmingense PR3 on black gram performance under saline field conditions (EC: 8.87 dS m−1; pH: 8.37) with low organic carbon (0.6%) and nutrient deficiencies. In vitro assays demonstrated the biocontrol potential of SPR11, inhibiting Fusarium oxysporum and Macrophomina phaseolina by 76% and 62%, respectively. Germination assays and net house experiments under 300 mM NaCl stress showed that co-inoculation significantly improved physiological traits, including germination rate, root length (61.39%), shoot biomass (59.95%), and nitrogen fixation (52.4%) in nitrogen-free media. Field trials further revealed enhanced stress tolerance markers: chlorophyll content increased by 54.74%, proline by 50.89%, and antioxidant enzyme activities (SOD, CAT, PAL) were significantly upregulated. Electrolyte leakage was reduced by 55.77%, indicating improved membrane stability. Agronomic performance also improved, with co-inoculated plants showing increased root length (7.19%), grain yield (15.55 q ha−1; 77.04% over control), total biomass (26.73 q ha−1; 57.06%), and straw yield (8.18 q ha−1). Pod number, seed count, and seed weight were also enhanced. Nutrient analysis showed elevated uptake of nitrogen, phosphorus, potassium, and key micronutrients (Zn, Fe) in both grain and straw. To the best of our knowledge, this is the very first field-based report demonstrating the synergistic benefits of co-inoculating Paenibacillus sp. SPR11 and Bradyrhizobium yuanmingense PR3 in black gram under saline, nutrient-poor conditions without external nitrogen inputs. The results highlight a sustainable strategy to enhance legume productivity and resilience in salt-affected soils. Full article
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20 pages, 2564 KB  
Article
Investigating the Mechanisms Underlying Citral-Induced Oxidative Stress and Its Contribution to Antifungal Efficacy on Magnaporthe oryzae Through a Multi-Omics Approach
by Yonghui Huang, Ruoruo Wang, Yumei Tan, Yongxiang Liu, Xiyi Ren, Congtao Guo, Rongyu Li and Ming Li
Plants 2025, 14(13), 2001; https://doi.org/10.3390/plants14132001 - 30 Jun 2025
Cited by 3 | Viewed by 1045
Abstract
Citral, an organic compound found in lemongrass (Cymbopogon citratus) oil and Litsea cubeba essential oil, has been reported to exhibit notable antifungal activity against Magnaporthe oryzae (M. oryzae), the pathogen of rice blast, which causes significant economic losses in [...] Read more.
Citral, an organic compound found in lemongrass (Cymbopogon citratus) oil and Litsea cubeba essential oil, has been reported to exhibit notable antifungal activity against Magnaporthe oryzae (M. oryzae), the pathogen of rice blast, which causes significant economic losses in rice production. However, the role of citral in inducing oxidative stress related to antifungal ability and its underlying regulatory networks in M. oryzae remain unclear. In this study, we investigated the oxidative effects of citral on M. oryzae and conducted transcriptomic and widely targeted metabolomic (WTM) analyses on the mycelia. The results showed that citral induced superoxide dismutase (SOD), catalase (CAT), ascorbate peroxidase (APX) activities but reduced glutathione S-transferase (GST) activity with 25% maximal effective concentration (EC25) and 75% maximal effective concentration (EC75). Importantly, citral at EC75 reduced the activities of mitochondrial respiratory chain complex I, complex III and ATP content, while increasing the activity of mitochondrial respiratory chain complex II. In addition, citral triggered a burst of reactive oxygen species (ROS) and a loss of mitochondrial membrane potential (MMP) through the observation of fluorescence. Furthermore, RNA-seq analysis and metabolomics analysis identified a total of 466 differentially expression genes (DEGs) and 32 differential metabolites (DAMs) after the mycelia were treated with citral. The following multi-omics analysis revealed that the metabolic pathways centered on AsA, GSH and melatonin were obviously suppressed by citral, indicating a disrupted redox equilibrium in the cell. These findings provide further evidences supporting the antifungal activity of citral and offer new insights into the response of M. oryzae under oxidative stress induced by citral. Full article
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17 pages, 5423 KB  
Article
Effects of Planting Density on Water Restoration Performance of Vallisneria spinulosa Yan Growth System Constructed by Enclosure
by Weiguang Sun, Jia Xing, Xinyu Li and Suqing Wu
Water 2025, 17(11), 1603; https://doi.org/10.3390/w17111603 - 25 May 2025
Viewed by 1046
Abstract
Submerged macrophytes play a crucial role in the ecological restoration of aquatic environments, and enclosed plot planting technology is one of the economical and effective methods to establish submerged macrophyte communities in high-turbidity water bodies. This study focused on Vallisneria spinulosa Yan ( [...] Read more.
Submerged macrophytes play a crucial role in the ecological restoration of aquatic environments, and enclosed plot planting technology is one of the economical and effective methods to establish submerged macrophyte communities in high-turbidity water bodies. This study focused on Vallisneria spinulosa Yan (V. spinulosa), examining the impact mechanism of planting density on the water restoration effectiveness of V. spinulosa growth systems constructed within enclosed plots, based on its growth and physiological characteristics as well as the water purification effects of its growth system. The research results indicate that low to medium planting densities (50–100 plants/m2) favor leaf elongation and expansion, as well as the growth of root diameter, surface area, and volume, while high densities (150–200 plants/m2) inhibit leaf and root growth. The content of photosynthetic pigments (chlorophyll a, chlorophyll b, and carotenoids) in V. spinulosa increased with planting density. At high densities, significant increases in superoxide dismutase (SOD), catalase (CAT), and malondialdehyde (MDA) levels in V. spinulosa suggest enhanced antioxidant activity. High protein content at low densities indicates stronger metabolic activity. Medium planting density (100 plants/m2) had significant effects on increasing dissolved oxygen (DO), regulating pH, and reducing electrical conductivity (EC), and exhibited the optimum removal loadings for total phosphorus (TP), phosphate (PO43−-P), total nitrogen (TN), and nitrate (NO3), achieving the average value of 0.44, 0.42, 6.94, 0.83 mg m−2 d−1. The findings of this study can provide a theoretical basis and technical support for practical ecological restoration projects involving submerged macrophytes in aquatic environments. Full article
(This article belongs to the Special Issue Ecological Wastewater Treatment and Resource Utilization)
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21 pages, 4901 KB  
Article
Arsenic Stress Resistance in the Endophytic Fungus Cladosporium cladosporioides: Physiological and Transcriptomic Insights into Heavy Metal Detoxification
by Xiao-Xu You, Xiao-Gang Li, Xing-Kai Zhang, Wen Gu, Di Chen, Sen He and Guan-Hua Cao
J. Fungi 2025, 11(5), 374; https://doi.org/10.3390/jof11050374 - 14 May 2025
Cited by 3 | Viewed by 1360
Abstract
This study aims to evaluate the tolerance of an endophytic fungus isolated from the fibrous roots of Gentiana yunnanensis Franch. to arsenic (As) and elucidate the underlying physiological and molecular mechanisms. The filamentous fungus is identified as Cladosporium cladosporioides based on morphological characteristics [...] Read more.
This study aims to evaluate the tolerance of an endophytic fungus isolated from the fibrous roots of Gentiana yunnanensis Franch. to arsenic (As) and elucidate the underlying physiological and molecular mechanisms. The filamentous fungus is identified as Cladosporium cladosporioides based on morphological characteristics and phylogenetic tree analysis, belonging to the family Moniliaceae and Phyla Hyphomycetes. The tolerance of C. cladosporioides to As(V) was assessed by measuring its biomass under varying concentrations of As(V). The fungus exhibited remarkable As(V) tolerance, with an EC50 value of 2051.94 mg/L, and accumulated high concentrations of As in its mycelium. Subcellular distribution analysis revealed that As was predominantly localized in the cell wall fraction, with levels 4.06 times higher than those in the non-cell wall fraction. Notably, the concentrations of total organic As and As(III) in the mycelium were 852.75 μg/g and 24.94 μg/g, respectively, with conversion ratios of 76.64% and 2.24%. The organic As levels significantly surpassed both As(V) and As(III) concentrations in all cellular fractions (cell wall and non-cell wall components), demonstrating particularly efficient As transformation in C. cladosporioides. Under As(V) stress, the membrane antioxidant system, including superoxide dismutase (SOD), metallothionein (MT), glutathione (GSH), and melanin, was activated and significantly enhanced to mitigate oxidative damage. Transcriptomic analysis identified 4771 differentially expressed genes (DEGs; 2527 upregulated), including highly expressed As-responsive genes (CcArsH_1, CcARR_1, CcARR_3, CcGST_1, and CcGST_3). Strong correlations emerged between As speciation (total/organic/As(V)/As(III)), antioxidant levels, and DEG expression patterns. Taken together, these findings demonstrate that C. cladosporioides employs a multi-faceted As detoxification strategy involving subcellular distribution and reductive transformation (As(V) to As(III)/organic As), antioxidant system enhancement, transcriptomic adaptations, and integrated defense strategy. This work highlights C. cladosporioides potential for As bioremediation and elucidates As accumulation mechanisms in G. yunnanensis. Full article
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Article
5-AzaCytidine Promotes Somatic Embryogenesis of Taxodium Hybrid ‘Zhongshanshan’ by Regulating Redox Homeostasis
by Guoying Yuan, Dan Wang, Chaoguang Yu, Jianfeng Hua, Yunlong Yin and Tingting Chen
Plants 2025, 14(9), 1354; https://doi.org/10.3390/plants14091354 - 30 Apr 2025
Cited by 2 | Viewed by 1398
Abstract
DNA methylation plays a crucial role in regulating the developmental processes of plants. Particularly, it is closely associated with the development of embryogenic cells (EC) and somatic embryos (SE). In this study, we investigated the effects of 5-azaCytidine (5-azaC) treatment on somatic embryogenesis [...] Read more.
DNA methylation plays a crucial role in regulating the developmental processes of plants. Particularly, it is closely associated with the development of embryogenic cells (EC) and somatic embryos (SE). In this study, we investigated the effects of 5-azaCytidine (5-azaC) treatment on somatic embryogenesis proliferation and maturation of Taxodium hybrid ‘zhongshanshan’. The results showed that the callus proliferation was inhibited when the concentration of 5-azaC exceeded 30 μM, while treatment with 5 μM 5-azaC improved the maturation rate and expedited the process of SE formation. It was also noted that 5-azaC influenced somatic embryogenesis during the second week of embryo induction, substantially enhancing the maturation rate of somatic embryos and the germination rate of Taxodium hybrid ‘zhongshanshan’. Furthermore, the analysis revealed that treatment with 5-azaC resulted in elevated levels of H2O2, SOD, POD, and AsA during the cotyledonary embryo period in Taxodium hybrid ‘zhongshanshan’, indicating its potential to promote somatic embryogenesis by regulating redox homeostasis. This study concluded that 5-azaC could improve the efficiency of somatic embryogenesis in Taxodium hybrid ‘zhongshanshan’, as well as provide a solid foundation for investigating the effects of 5-azaC on somatic embryogenesis in other conifer species. Full article
(This article belongs to the Special Issue Advances and Applications in Plant Tissue Culture—2nd Edition)
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