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Search Results (1,009)

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Keywords = citrus production

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23 pages, 7166 KiB  
Article
Deriving Early Citrus Fruit Yield Estimation by Combining Multiple Growing Period Data and Improved YOLOv8 Modeling
by Menglin Zhai, Juanli Jing, Shiqing Dou, Jiancheng Du, Rongbin Wang, Jichi Yan, Yaqin Song and Zhengmin Mei
Sensors 2025, 25(15), 4718; https://doi.org/10.3390/s25154718 - 31 Jul 2025
Viewed by 248
Abstract
Early crop yield prediction is a major challenge in precision agriculture, and efficient and rapid yield prediction is highly important for sustainable fruit production. The accurate detection of major fruit characteristics, including flowering, green fruiting, and ripening stages, is crucial for early yield [...] Read more.
Early crop yield prediction is a major challenge in precision agriculture, and efficient and rapid yield prediction is highly important for sustainable fruit production. The accurate detection of major fruit characteristics, including flowering, green fruiting, and ripening stages, is crucial for early yield estimation. Currently, most crop yield estimation studies based on the YOLO model are only conducted during a single stage of maturity. Combining multi-growth period data for crop analysis is of great significance for crop growth detection and early yield estimation. In this study, a new network model, YOLOv8-RL, was proposed using citrus multigrowth period characteristics as a data source. A citrus yield estimation model was constructed and validated by combining network identification counts with manual field counts. Compared with YOLOv8, the number of parameters of the improved network is reduced by 50.7%, the number of floating-point operations is decreased by 49.4%, and the size of the model is only 3.2 MB. In the test set, the average recognition rate of citrus flowers, green fruits, and orange fruits was 95.6%, the mAP@.5 was 94.6%, the FPS value was 123.1, and the inference time was only 2.3 milliseconds. This provides a reference for the design of lightweight networks and offers the possibility of deployment on embedded devices with limited computational resources. The two estimation models constructed on the basis of the new network had coefficients of determination R2 values of 0.91992 and 0.95639, respectively, with a prediction error rate of 6.96% for citrus green fruits and an average error rate of 3.71% for orange fruits. Compared with network counting, the yield estimation model had a low error rate and high accuracy, which provided a theoretical basis and technical support for the early prediction of fruit yield in complex environments. Full article
(This article belongs to the Section Smart Agriculture)
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18 pages, 1640 KiB  
Article
Optimizing Citrus aurantifolia (Christm. Swingle) Production Through Integrated Irrigation and Growth Regulation Strategies
by Adriana Celi Soto, Diana Pincay Sánchez, Laura Pincay Sánchez, Luis Alcívar Zambrano, Ángel Sabando Zambrano, Cristhian Vega Ponce, George Cedeño García, Luis Saltos Rezabala, Liliana Corozo Quiñónez, Francisco Arteaga Alcívar, Edisson Cuenca Cuenca, Ramón Jaimez Arellano, Galo Cedeño García and Margarita Delgado Demera
Agronomy 2025, 15(8), 1853; https://doi.org/10.3390/agronomy15081853 - 31 Jul 2025
Viewed by 208
Abstract
Optimizing irrigation and the targeted use of plant growth regulators are key strategies to improve productivity in citrus systems under water-limited conditions. This study evaluated the effects of three irrigation levels (4.44, 5.18, and 7.77 mm day−1) combined with variable doses [...] Read more.
Optimizing irrigation and the targeted use of plant growth regulators are key strategies to improve productivity in citrus systems under water-limited conditions. This study evaluated the effects of three irrigation levels (4.44, 5.18, and 7.77 mm day−1) combined with variable doses of naphthaleneacetic acid (NAA) and gibberellic acid (GA3) on physiological and productive responses in Citrus aurantiifolia. The treatment with 7.77 mm irrigation and moderate doses of NAA (100 mg L−1) and GA3 (80 mg L−1) increased yield by 38% (6.2 kg/plant), and it enhanced photosystem II photochemical efficiency (Fv/Fm = 0.82), chlorophyll index (SPAD = 62), and fruit weight by 15%. In contrast, high hormone doses under water deficit reduced leaf water potential and impaired physiological performance, leading to lower productivity. These findings support the combined use of regulated deficit irrigation and hormonal biostimulation as a sustainable strategy to enhance key lime yield and resource efficiency in semi-arid environments. Full article
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16 pages, 8060 KiB  
Article
Transcriptomic Reprogramming and Key Molecular Pathways Underlying Huanglongbing Tolerance and Susceptibility in Six Citrus Cultivars
by Xiaohong Chen, Fang Fang, Tingting Chen, Jinghua Wu, Zheng Zheng and Xiaoling Deng
Int. J. Mol. Sci. 2025, 26(15), 7359; https://doi.org/10.3390/ijms26157359 - 30 Jul 2025
Viewed by 237
Abstract
Huanglongbing (HLB), caused by Candidatus Liberibacter asiaticus (CLas), is the most devastating disease threatening global citrus production. Although no commercial citrus varieties exhibit complete HLB resistance, genotype-specific tolerance variations remain underexplored. This study conducted a comparative transcriptomic profiling of six commercially citrus cultivars [...] Read more.
Huanglongbing (HLB), caused by Candidatus Liberibacter asiaticus (CLas), is the most devastating disease threatening global citrus production. Although no commercial citrus varieties exhibit complete HLB resistance, genotype-specific tolerance variations remain underexplored. This study conducted a comparative transcriptomic profiling of six commercially citrus cultivars in South China, four susceptible cultivars (C. reticulata cv. Tankan, Gongkan, Shatangju, and C. sinensis Osbeck cv. Newhall), and two tolerant cultivars (C. limon cv. Eureka; C. maxima cv Guanxi Yu) to dissect molecular mechanisms underlying HLB responses. Comparative transcriptomic analyses revealed extensive transcriptional reprogramming, with tolerant cultivars exhibiting fewer differentially expressed genes (DEGs) and targeted defense activation compared to susceptible genotypes. The key findings highlighted the genotype-specific regulation of starch metabolism, where β-amylase 3 (BAM3) was uniquely upregulated in tolerant varieties, potentially mitigating starch accumulation. Immune signaling diverged significantly: tolerant cultivars activated pattern-triggered immunity (PTI) via receptor-like kinases (FLS2) and suppressed ROS-associated RBOH genes, while susceptible genotypes showed the hyperactivation of ethylene signaling and oxidative stress pathways. Cell wall remodeling in susceptible cultivars involved upregulated xyloglucan endotransglucosylases (XTH), contrasting with pectin methylesterase induction in tolerant Eureka lemon for structural reinforcement. Phytohormonal dynamics revealed SA-mediated defense and NPR3/4 suppression in Eureka lemon, whereas susceptible cultivars prioritized ethylene/JA pathways. These findings delineate genotype-specific strategies in citrus–CLas interactions, identifying BAM3, FLS2, and cell wall modifiers as critical targets for breeding HLB-resistant cultivars through molecular-assisted selection. This study provides a foundational framework for understanding host–pathogen dynamics and advancing citrus immunity engineering. Full article
(This article belongs to the Special Issue Plant-Microbe Interaction: Current Status and Future Directions)
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16 pages, 7201 KiB  
Article
Carnauba Wax Coatings Enriched with Essential Oils or Fruit By-Products Reduce Decay and Preserve Postharvest Quality in Organic Citrus
by Lorena Martínez-Zamora, Rosa Zapata, Marina Cano-Lamadrid and Francisco Artés-Hernández
Foods 2025, 14(15), 2616; https://doi.org/10.3390/foods14152616 - 25 Jul 2025
Viewed by 370
Abstract
This research analyzes the innovative development of carnauba wax coatings enriched with essential oils (EOs: lemon, orange, grapefruit, clove, oregano, and cinnamon) or fruit by-products (FBPs: avocado, tomato, carrot, orange, lemon, and grapefruit) to improve postharvest preservation of organic oranges and lemons. Six [...] Read more.
This research analyzes the innovative development of carnauba wax coatings enriched with essential oils (EOs: lemon, orange, grapefruit, clove, oregano, and cinnamon) or fruit by-products (FBPs: avocado, tomato, carrot, orange, lemon, and grapefruit) to improve postharvest preservation of organic oranges and lemons. Six EOs and six FBPs were evaluated for total phenolic content (TPC) and in vitro antifungal activity against Penicillium digitatum. Based on results, grapefruit, oregano, and clove EOs were selected for lemons, while avocado, orange, and grapefruit FBPs were selected for oranges. An in vivo test at 20 °C for 15 days with carnauba wax coatings assessed antifungal performance. Clove EO and avocado FBP showed strong in vitro inhibition and consistent hyphal suppression (~100 and ~82%, respectively). In vivo, coatings with grapefruit EO and avocado FBP significantly reduced fungal decay and sporulation (~75%) in lemons and oranges, respectively. Coated fruits also retained weight losses by ~25% compared to uncoated ones. These findings suggest that phenolic-rich natural extracts, especially from agro-industrial residues like avocado peels, offer a promising and sustainable strategy for postharvest citrus disease control. Further studies should test coating effectiveness in large-scale trials under refrigeration combined with other preservation strategies. Full article
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22 pages, 1279 KiB  
Review
State of the Art of Biomethane Production in the Mediterranean Region
by Antonio Comparetti, Salvatore Ciulla, Carlo Greco, Francesco Santoro and Santo Orlando
Agronomy 2025, 15(7), 1702; https://doi.org/10.3390/agronomy15071702 - 15 Jul 2025
Viewed by 390
Abstract
The Mediterranean region is increasingly confronted with intersecting environmental, agricultural, and socio-economic challenges, including biowaste accumulation, soil degradation, and high dependency on imported fossil fuels. Biomethane, a renewable substitute for natural gas, offers a strategic solution that aligns with the region’s need for [...] Read more.
The Mediterranean region is increasingly confronted with intersecting environmental, agricultural, and socio-economic challenges, including biowaste accumulation, soil degradation, and high dependency on imported fossil fuels. Biomethane, a renewable substitute for natural gas, offers a strategic solution that aligns with the region’s need for sustainable energy transition and circular resource management. This review examines the current state of biomethane production in the Mediterranean area, with a focus on anaerobic digestion (AD) technologies, feedstock availability, policy drivers, and integration into the circular bioeconomy (CBE) framework. Emphasis is placed on the valorisation of regionally abundant feedstocks such as olive pomace, citrus peel, grape marc, cactus pear (Opuntia ficus-indica) residues, livestock manure, and the Organic Fraction of Municipal Solid Waste (OFMSW). The multifunctionality of AD—producing renewable energy and nutrient-rich digestate—is highlighted for its dual role in reducing greenhouse gas (GHG) emissions and restoring soil health, especially in areas threatened by desertification such as Sicily (Italy), Spain, Malta, and Greece. The review also explores emerging innovations in biogas upgrading, nutrient recovery, and digital monitoring, along with the role of Renewable Energy Directive III (RED III) and national biomethane strategies in scaling up deployment. Case studies and decentralised implementation models underscore the socio-technical feasibility of biomethane systems across rural and insular territories. Despite significant potential, barriers such as feedstock variability, infrastructural gaps, and policy fragmentation remain. The paper concludes with a roadmap for research and policy to advance biomethane as a pillar of Mediterranean climate resilience, energy autonomy and sustainable agriculture within a circular bioeconomy paradigm. Full article
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21 pages, 23297 KiB  
Article
Global Tangerine Trade Market: Revealed Competitiveness and Market Powers
by Shu-Yi Chi, Chiao-Chun Chang and Li-Hsien Chien
Economies 2025, 13(7), 203; https://doi.org/10.3390/economies13070203 - 15 Jul 2025
Viewed by 391
Abstract
The international trade in agricultural products is complex and diverse. Global buyers must diversify their import sources, while sellers must explore new market opportunities. In the past, there has been no analysis on how second-tier exporters, with a smaller market share compared to [...] Read more.
The international trade in agricultural products is complex and diverse. Global buyers must diversify their import sources, while sellers must explore new market opportunities. In the past, there has been no analysis on how second-tier exporters, with a smaller market share compared to dominant exporters, interact in the same target market and within an existing trade market and what factors affect trade prices and market forces. Based on Vollrath’s revealed competitive advantage index framework, this study analyzes the global tangerine trade (HS08052100) and means of production from 2008 to 2021, performs clustering, and estimates the residual demand elasticities of two main second-tier exporting countries—South Africa and Morocco—in four major importing countries for empirical analysis. The results show that South African tangerines have a lower market share than Moroccan tangerines in the Netherlands, the United States, and the United Kingdom. However, all data indicate that the residual demand elasticity for the country’s products in the target markets is negative, indicating that South African exporters have market influence in all three markets and significantly affect the prices of Moroccan products in these markets. Unlike other studies that have focused on the ranking analysis of export indices, the novelty of this study is that it provides an oligopolistic framework based on agricultural value chain analysis, which can be used for many countries with limited export scales. The method proposed in this study is expected to help citrus traders to effectively find export markets by evaluating the remaining market niches using key market data and the prices of similar competitors in the same category. Full article
(This article belongs to the Special Issue Demand and Price Analysis in Agricultural and Food Economics)
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20 pages, 4949 KiB  
Article
Steam Distillation of Citrus Waste Extract for Antimicrobial Metal Nanoparticle Synthesis
by Javier Emanuel Castañeda-Aude, Enrique Díaz Barriga-Castro, Lizbeth Liliana Díaz-Muñoz, Javier Alberto Garza-Cervantes, José Rodríguez-Mirasol, José Rubén Morones-Ramírez, Héctor Javier Amézquita-García, David Alejandro De Haro-Del Río, Angel León-Buitimea, Noe Macias-Segura and Carlos Enrique Escárcega-González
Technologies 2025, 13(7), 303; https://doi.org/10.3390/technologies13070303 - 14 Jul 2025
Viewed by 1459
Abstract
This research presents a novel, sustainable, and eco-friendly method for the rapid green synthesis of nanoparticles with antibacterial properties. This method employs steam distillation to extract reducing and stabilizing agents from orange peel waste, followed by ultrasound-assisted synthesis. To the best of our [...] Read more.
This research presents a novel, sustainable, and eco-friendly method for the rapid green synthesis of nanoparticles with antibacterial properties. This method employs steam distillation to extract reducing and stabilizing agents from orange peel waste, followed by ultrasound-assisted synthesis. To the best of our knowledge, this is the first reported integration of these two techniques for nanoparticle production. The extracted materials were then subjected to rigorous characterization through a combination of analytical techniques, including FTIR, HPLC, and TEM. These analytical approaches enabled a comprehensive analysis of the synthesized NPs, revealing their size distribution within the range of 1.5 to 14 nm. Among the synthesized nanomaterials, AgNPs exhibited the most potent antibacterial activity, with statistically significant minimum inhibitory concentrations (MICs) of 16 ppm for E. coli ATCC and 32 ppm for resistant E. coli and E. faecalis strains. This study underscored the promise of valorizing citrus waste for nanomaterial synthesis and introduced a novel, scalable methodology for producing bioactive nanoparticles, promoting a more sustainable technology for this purpose. Notably, this research aligns with United Nations Sustainable Development Goal 12, which promotes responsible consumption and production by transforming organic waste into high-value functional nanomaterials for biomedical and environmental applications. Full article
(This article belongs to the Section Environmental Technology)
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14 pages, 1091 KiB  
Review
Gamma-Aminobutyric Acid: A Novel Biomolecule to Improve Plant Resistance and Fruit Quality
by Jingrong Wang, Shaokun Sun, Wei Fang, Xin Fu, Fuguo Cao and Shujun Liu
Plants 2025, 14(14), 2162; https://doi.org/10.3390/plants14142162 - 13 Jul 2025
Viewed by 503
Abstract
Gamma-aminobutyric acid (GABA), a ubiquitous non-protein amino acid, plays a vital role in the response of plants to biotic and abiotic stresses. This review summarizes the underlying mechanisms through which GABA contributes to plant stress resistance, including its biosynthetic and metabolic pathways, as [...] Read more.
Gamma-aminobutyric acid (GABA), a ubiquitous non-protein amino acid, plays a vital role in the response of plants to biotic and abiotic stresses. This review summarizes the underlying mechanisms through which GABA contributes to plant stress resistance, including its biosynthetic and metabolic pathways, as well as its regulatory roles in enhancing stress tolerance and improving fruit quality. In plants, GABA is primarily synthesized from glutamate by the enzyme glutamate decarboxylase (GAD) and further metabolized by GABA transaminase (GABA-T) and succinic semialdehyde dehydrogenase (SSADH). The accumulation of GABA regulates various physiological and biochemical processes, including the control of stomatal closure, enhancement of antioxidant capacity, maintenance of ionic homeostasis, and stabilization of cellular pH. Moreover, GABA interacts with phytohormones to regulate plant growth, development, and stress tolerance. Notably, increasing GAD expression through genetic engineering has been shown to enhance tolerance to stresses, such as drought, saline-alkali, cold, and heat, in various plants, including tomato, rice, and creeping bentgrass. Additionally, GABA has effectively improved the storage quality of various fruits, including citrus fruits, apples, and strawberries. In conclusion, GABA holds significant research potential and promising applications in agricultural production and plant science. Full article
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61 pages, 5489 KiB  
Review
Unlocking the Sublime: A Review of Native Australian Citrus Species
by Joel B. Johnson, Natasha L. Hungerford, Yasmina Sultanbawa and Michael E. Netzel
Foods 2025, 14(14), 2425; https://doi.org/10.3390/foods14142425 - 9 Jul 2025
Viewed by 1795
Abstract
Citrus fruit are well-known for their characteristic flavour and nutritional value. Global citrus production has increased by 528% between 1961 and 2021, and in Australia, citrus is the most exported fresh fruit product by volume. There are six described Citrus species endemic to [...] Read more.
Citrus fruit are well-known for their characteristic flavour and nutritional value. Global citrus production has increased by 528% between 1961 and 2021, and in Australia, citrus is the most exported fresh fruit product by volume. There are six described Citrus species endemic to Australia: C. australasica (Australian finger lime), C. australis (round lime), C. garrawayi (Mount White lime), C. glauca (desert lime), C. gracilis (Humpty Doo lime), and C. inodora (Russell River lime). Australian Citrus possess unique flavours, aromas, and phytochemical profiles, suggesting a potential use as novelty crops and/or ‘functional foods’. Furthermore, the native Australian Citrus germplasm is a valuable source of desirable traits in citrus breeding, including drought, cold, heat, salinity, and disease resistance. These may help solve some challenges facing citrus growers globally, including disease, a declining soil quality, changing climates, and narrowing profit margins. However, many Australian citrus species’ nutritional value, chemical composition, and bioactive properties remain unknown. This review focuses on these under-investigated native Citrus species, their distribution, production, physiology, disease tolerance, traditional use, taxonomy, flavour, nutritional composition, bioactivity, and commercial production. It concludes with a perspective on the future of these native species in the Australian and global citrus context. Full article
(This article belongs to the Section Plant Foods)
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20 pages, 3626 KiB  
Article
Environmental, Genetic and Structural Interactions Affecting Phytophthora spp. in Citrus: Insights from Mixed Modelling and Mediation Analysis to Support Agroecological Practices
by Dalal Boudoudou, Majid Mounir, Mohamed El bakkali, Allal Douira and Hamid Benyahia
Agronomy 2025, 15(7), 1631; https://doi.org/10.3390/agronomy15071631 - 4 Jul 2025
Viewed by 429
Abstract
This study investigates the complex interactions between environmental, genetic, and structural factors that influence two key parameters: the density of Phytophthora spp. propagules per gram of dry soil (NPSS) and the number of colonies (NC). Using advanced statistical approaches, we examined the combined [...] Read more.
This study investigates the complex interactions between environmental, genetic, and structural factors that influence two key parameters: the density of Phytophthora spp. propagules per gram of dry soil (NPSS) and the number of colonies (NC). Using advanced statistical approaches, we examined the combined effects of variables such as soil moisture, dry weight, temporal fluctuations, and rootstocks. The results show a significant linear relationship between NPSS and soil moisture, as well as a strong positive correlation between NPSS and NC. Genetic analyses reveal a predominant contribution of environmental factors to trait variability, with high phenotypic coefficient of variation (PCV) and low broad-sense heritability. Mixed models highlight the synergistic impact of soil moisture, NC, and dry soil weight on NPSS, as well as significant temporal effects. Mediation analysis confirms that soil moisture influences NPSS primarily through an indirect effect transmitted by NC, with a mediated proportion exceeding 94%. Finally, multivariate analysis reveals significant differences between rootstocks, with Citrus Volkameriana B2 28613 (R4) and Mandarin Sunki x P.T. B2 38581 (R7) standing out as the most performant. These results highlight the importance of an integrated management of environmental variables and rootstocks to optimize soil productivity and agronomic quality. The implications of this study provide a solid foundation for guiding genetic improvement and soil management strategies, balancing environmental constraints and the opportunities offered by targeted genetic selection. Full article
(This article belongs to the Section Pest and Disease Management)
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19 pages, 1341 KiB  
Review
Antioxidant and Anti-Inflammatory Effects of Traditional Medicinal Plants for Urolithiasis: A Scoping Review
by Brenda Pacheco-Hernández, Teresa Ayora-Talavera, Julia Cano-Sosa, Lilia G. Noriega, Neith Aracely Pacheco-López, Juan M. Vargas-Morales, Isabel Medina-Vera, Martha Guevara-Cruz, Rodolfo Chim-Aké, Ana Ligia Gutiérrez-Solis, Roberto Lugo and Azalia Avila-Nava
Plants 2025, 14(13), 2032; https://doi.org/10.3390/plants14132032 - 2 Jul 2025
Viewed by 770
Abstract
Urolithiasis (UL) is the presence of stones in the kidneys or urinary tract; its prevalence has increased worldwide. Thus, strategies have been sought to reduce it and one of them is the use of medicinal plants due to their accessibility, low cost, and [...] Read more.
Urolithiasis (UL) is the presence of stones in the kidneys or urinary tract; its prevalence has increased worldwide. Thus, strategies have been sought to reduce it and one of them is the use of medicinal plants due to their accessibility, low cost, and cultural traditions. Studies on traditional medicinal plants in UL mainly documented results of litholytic and urinary parameters. Although, stone formation is related to oxidative stress and inflammation, and only a few studies are focused on these types of biomarkers. Thus, the aim of the present review was to summarize studies showing the antioxidant and anti-inflammatory effects of traditional medicinal plants used in UL management. We performed a scoping review; the database sources used were MEDLINE/PubMed, Google Scholar, SpringerLink, Scielo and Redalyc. From a total of 184 studies screened, six were included from China (2), India (3), and Corea (1). These studies have shown the antioxidant and anti-inflammatory effects of traditional medicinal plants, including Glechoma longituba (G. longituba), Bergenia ligulate (B. ligulate), Lygodium japonicum (L. japonicum), Citrus limon (C. limon), Xanthium strumarium (X. strumarium) and Tribulus terrestris (T. terrestris). They have also described their molecular mechanism of antioxidant and anti-inflammatory effects through the activation of antioxidant genes induced by Nrf2 or by suppressing the inflammatory gene expression by the inhibition of NFκ-B. These effects could be modulated by their bioactive compounds, such as polyphenols, flavonoids, tannins, saponins, and terpenes, present in these plants. This review summarizes the antioxidant and anti-inflammatory effects of traditional medicinal plants and highlights their molecular mechanisms of action and main bioactive compounds. This evidence may be used in biotechnology and synthetic biology areas for the development of new products from plant-derived compounds to reduce the high recurrence rates of UL. Full article
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17 pages, 4030 KiB  
Article
Effects of Cultivation Modes on Soil Protistan Communities and Its Associations with Production Quality in Lemon Farmlands
by Haoqiang Liu, Hongjun Li, Zhuchun Peng, Sichen Li and Chun Ran
Plants 2025, 14(13), 2024; https://doi.org/10.3390/plants14132024 - 2 Jul 2025
Viewed by 356
Abstract
Citrus is one of the most widely consumed fruits in the world, and its cultivation industry continues to develop rapidly. However, the roles of soil protistan communities during citrus growth are not yet fully understood, despite the potential significance of these communities to [...] Read more.
Citrus is one of the most widely consumed fruits in the world, and its cultivation industry continues to develop rapidly. However, the roles of soil protistan communities during citrus growth are not yet fully understood, despite the potential significance of these communities to the health and quality of citrus. In this study, we examined the soil properties and protistan communities in Eureka lemon farmlands located in Chongqing, China, during the flowering and fruiting stages of cultivation, both in greenhouse and open-field settings. In general, the majority of the measured soil properties (including nutrients and enzyme activities) exhibited higher values in open-field farmlands in comparison to those observed in greenhouse counterparts. According to the results of high-throughput sequencing based on the V9 region of eukaryotic 18S rRNA gene, the diversity of soil protistan communities was also higher in open-field farmlands, and both lemon growth stage and cultivation modes showed significant effects on soil protistan compositions. The transition from traditional agricultural practices to greenhouse farming resulted in a significant transformation of the soil protistan community. This transformation manifested as a shift towards a state characterized by diminished nutrient cycling capabilities. This decline was evidenced by an increase in phototrophs (Archaeplastida) and a concomitant decrease in consumers (Stramenopiles and Alveolata). Community assembly analysis revealed deterministic processes that controlled the succession of soil protistan communities in lemon farmlands. It has been established that environmental associations have the capacity to recognize nitrogen in soils, thereby providing a deterministic selection process for protistan community assembly. Furthermore, a production index was calculated based on 12 quality parameters of lemons, and the results indicated that lemons from greenhouse farms exhibited a lower quality compared to those from open fields. The structure equation model revealed a direct correlation between the quality of lemons and the cultivation methods employed, as well as the composition of soil protists. The present study offers insights into the mechanisms underlying the correlations between the soil protistan community and lemon quality in response to changes in the cultivation modes. Full article
(This article belongs to the Special Issue Innovative Techniques for Citrus Cultivation)
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31 pages, 31711 KiB  
Article
On the Usage of Deep Learning Techniques for Unmanned Aerial Vehicle-Based Citrus Crop Health Assessment
by Ana I. Gálvez-Gutiérrez, Frederico Afonso and Juana M. Martínez-Heredia
Remote Sens. 2025, 17(13), 2253; https://doi.org/10.3390/rs17132253 - 30 Jun 2025
Viewed by 432
Abstract
This work proposes an end-to-end solution for leaf segmentation, disease detection, and damage quantification, specifically focusing on citrus crops. The primary motivation behind this research is to enable the early detection of phytosanitary problems, which directly impact the productivity and profitability of Spanish [...] Read more.
This work proposes an end-to-end solution for leaf segmentation, disease detection, and damage quantification, specifically focusing on citrus crops. The primary motivation behind this research is to enable the early detection of phytosanitary problems, which directly impact the productivity and profitability of Spanish and Portuguese agricultural developments, while ensuring environmentally safe management practices. It integrates an onboard computing module for Unmanned Aerial Vehicles (UAVs) using a Raspberry Pi 4 with Global Positioning System (GPS) and camera modules, allowing the real-time geolocation of images in citrus croplands. To address the lack of public data, a comprehensive database was created and manually labelled at the pixel level to provide accurate training data for a deep learning approach. To reduce annotation effort, we developed a custom automation algorithm for pixel-wise labelling in complex natural backgrounds. A SegNet architecture with a Visual Geometry Group 16 (VGG16) backbone was trained for the semantic, pixel-wise segmentation of citrus foliage. The model was successfully integrated as a modular component within a broader system architecture and was tested with UAV-acquired images, demonstrating accurate disease detection and quantification, even under varied conditions. The developed system provides a robust tool for the efficient monitoring of citrus crops in precision agriculture. Full article
(This article belongs to the Special Issue Application of Satellite and UAV Data in Precision Agriculture)
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24 pages, 10260 KiB  
Article
Functional Characterization of Deubiquitinase UBP Family and Proteomic Analysis of Aaubp14-Mediated Pathogenicity Mechanism in Alternaria alternata
by Jiejing Tang, Hang Zhou, Chen Jiao and Hongye Li
J. Fungi 2025, 11(7), 495; https://doi.org/10.3390/jof11070495 - 29 Jun 2025
Viewed by 521
Abstract
The Alternaria alternata tangerine pathotype causes Alternaria brown spot, a devastating disease of susceptible tangerine varieties and their hybrids. Alternaria citri toxin (ACT) is the primary virulence factor, but the regulatory mechanisms governing ACT synthesis remain unclear. Deubiquitinating enzymes maintain ubiquitination homeostasis and [...] Read more.
The Alternaria alternata tangerine pathotype causes Alternaria brown spot, a devastating disease of susceptible tangerine varieties and their hybrids. Alternaria citri toxin (ACT) is the primary virulence factor, but the regulatory mechanisms governing ACT synthesis remain unclear. Deubiquitinating enzymes maintain ubiquitination homeostasis and regulate fungal pathogenicity, yet their role in A. alternata remains unexplored. We characterized 13 ubiquitin-specific protease (UBP) family members in A. alternata tangerine pathotype. Six UBP genes (Aaubp2, Aaubp3, Aaubp4, Aaubp6, Aaubp14, and Aaubp15) regulated mycelial growth. Aaubp14 deletion abolished sporulation, while mutations of Aaubp3, Aaubp4, Aaubp6, Aaubp8, and Aaubp15 altered conidial morphology. qRT-PCR demonstrated distinct host-induced expression patterns among Aaubp genes. Pathogenicity tests showed that ΔAaubp6, ΔAaubp14, and ΔAaubp15 mutants failed to produce lesions on Citrus reticulata cv. Hongjv leaves. Moreover, Aaubp14 deletion significantly suppressed ACT biosynthesis gene expression and blocked ACT production. Comparative proteomics showed Aaubp14 regulates ACT biosynthesis by modulating protein ubiquitination in metabolic pathways and controls pathogenicity via a complex network. Our findings elucidate Aaubp gene function in development and pathogenicity, particularly the Aaubp14-mediated regulation mechanism, providing insights into ubiquitination-mediated pathogenicity in phytopathogenic fungi. Full article
(This article belongs to the Section Fungal Pathogenesis and Disease Control)
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19 pages, 2055 KiB  
Article
Extract of Tangerine Peel as a Botanical Insecticide Candidate for Smallholder Potato Cultivation
by José-Manuel Pais-Chanfrau, Lisbeth J. Quiñonez-Montaño, Jimmy Núñez-Pérez, Julia K. Prado-Beltrán, Magali Cañarejo-Antamba, Jhomaira L. Burbano-García, Andrea J. Chiliquinga-Quispe and Hortensia M. Rodríguez Cabrera
Insects 2025, 16(7), 680; https://doi.org/10.3390/insects16070680 - 29 Jun 2025
Viewed by 842
Abstract
Background: Contemporary agriculture heavily relies on synthetic chemicals to ensure high yields and food security; however, their overuse has led to health issues and the development of pesticide resistance in pests. Researchers are now exploring natural, eco-friendly alternatives for pest control. Methods: This [...] Read more.
Background: Contemporary agriculture heavily relies on synthetic chemicals to ensure high yields and food security; however, their overuse has led to health issues and the development of pesticide resistance in pests. Researchers are now exploring natural, eco-friendly alternatives for pest control. Methods: This study evaluated two ethanol-based formulations (1.25% and 2.50%, v/v) derived from the tangerine peel (Citrus reticulata L. var. Clementina) against conventional chemical treatments and an untreated control group in the cultivation of potatoes (Solanum tuberosum L. var. Capiro). A randomised block design was used, with three blocks per treatment containing 45 plants. The experiment was conducted during the wet season (February–April 2023). Results: According to visual inspections and yellow traps, following weekly application from days 30 to 105 post-planting to monitor pest (e.g., Frankliniella occidentalis, Aphididae) and beneficial insect (e.g., Coccinellidae, Apis mellifera) populations, the 2.50% formulation performed similarly to chemical treatments against pests, whilst being harmless to beneficial insects. Post-harvest analysis showed that the formulations achieved 73% of conventional yields, with comparable tuber damage and levels of Premnotrypes vorax larvae. Conclusions: Toxicological tests confirmed the eco-friendliness of the formulations, making them suitable for small-scale Andean ‘chakras’ in organic farming and honey production, without the use of chemicals. Full article
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