You are currently on the new version of our website. Access the old version .

767 Results Found

  • Review
  • Open Access
34 Citations
10,124 Views
16 Pages

Aspergillus oryzae as a Cell Factory: Research and Applications in Industrial Production

  • Zeao Sun,
  • Yijian Wu,
  • Shihua Long,
  • Sai Feng,
  • Xiao Jia,
  • Yan Hu,
  • Maomao Ma,
  • Jingxin Liu and
  • Bin Zeng

26 March 2024

Aspergillus oryzae, a biosafe strain widely utilized in bioproduction and fermentation technology, exhibits a robust hydrolytic enzyme secretion system. Therefore, it is frequently employed as a cell factory for industrial enzyme production. Moreover...

  • Review
  • Open Access
6 Citations
3,088 Views
14 Pages

24 January 2023

Covering 2009–2022. Phenylnaphthacenoid polyketides have gained significant interest in recent years owing to their potent antibacterial and anticancer activities. Notably, more than 100 members of this class of natural products have been disco...

  • Article
  • Open Access
9 Citations
3,863 Views
19 Pages

2 September 2022

The research on the layout of multi-layer manufacturing cells for smart factories is still in its infancy, but there is an urgent need to address this issue in building smart factories. This paper presents the Manufacturing Cell Integrated Layout (MC...

  • Article
  • Open Access
2 Citations
2,260 Views
18 Pages

Coriolopsis trogii MUT3379: A Novel Cell Factory for High-Yield Laccase Production

  • Luca Mellere,
  • Martina Bellasio,
  • Francesca Berini,
  • Flavia Marinelli,
  • Jean Armengaud and
  • Fabrizio Beltrametti

Coriolopsis trogii is a basidiomycete fungus which utilizes a large array of lignin-modifying enzymes to colonize and decompose dead wood. Its extracellular enzymatic arsenal includes laccases, i.e., polyphenol oxidases of relevant interest for diffe...

  • Article
  • Open Access
854 Views
23 Pages

Genome-Driven Insights into Lactococcus sp. KTH0-1S Highlights Its Biotechnological Potential as a Cell Factory

  • Nisit Watthanasakphuban,
  • Hind Abibi,
  • Nuttakan Nitayapat,
  • Phitsanu Pinmanee,
  • Chollachai Klaysubun,
  • Nattarika Chaichana,
  • Komwit Surachat and
  • Suttipun Keawsompong

25 September 2025

The safety, genetic distinctiveness, and functional capabilities of Lactococcus sp. KTH0-1S, a strain isolated from Thai fermented shrimp (Kung-Som), were investigated to assess its potential as a next-generation probiotic and microbial cell factory....

  • Review
  • Open Access
83 Citations
12,472 Views
19 Pages

Algal Cell Factories: Approaches, Applications, and Potentials

  • Weiqi Fu,
  • Amphun Chaiboonchoe,
  • Basel Khraiwesh,
  • David R. Nelson,
  • Dina Al-Khairy,
  • Alexandra Mystikou,
  • Amnah Alzahmi and
  • Kourosh Salehi-Ashtiani

13 December 2016

With the advent of modern biotechnology, microorganisms from diverse lineages have been used to produce bio-based feedstocks and bioactive compounds. Many of these compounds are currently commodities of interest, in a variety of markets and their uti...

  • Review
  • Open Access
11 Citations
3,046 Views
14 Pages

Class IIa bacteriocins produced in lactic acid bacteria are short cationic peptides with antimicrobial activity. In the search for new biopreservation agents, class IIa bacteriocins are considered to be the best potential candidates, not only due to...

  • Review
  • Open Access
39 Citations
11,286 Views
20 Pages

Cell Factories for Industrial Production Processes: Current Issues and Emerging Solutions

  • Clara Navarrete,
  • Irene Hjorth Jacobsen,
  • José Luis Martínez and
  • Alessandra Procentese

30 June 2020

Despite all the progresses made by metabolic engineering, still only a few biotechnological processes are running at an industrial level. In order to boost the biotechnological sector, integration strategies as well as long-term views are needed. The...

  • Review
  • Open Access
27 Citations
16,177 Views
19 Pages

19 October 2023

Pichia pastoris is the most widely used microorganism for the production of secreted industrial proteins and therapeutic proteins. Recently, this yeast has been repurposed as a cell factory for the production of chemicals and natural products. In thi...

  • Review
  • Open Access
1 Citations
1,489 Views
17 Pages

24 September 2025

The prevalence of infectious diseases is steadily increasing. If left untreated, they can lead to more serious health problems. Antibiotics currently available on the market are facing growing resistance, prompting the development of increasingly pow...

  • Feature Paper
  • Review
  • Open Access
9 Citations
4,299 Views
16 Pages

Anticancer Asparaginases: Perspectives in Using Filamentous Fungi as Cell Factories

  • Pedro Henrique Dias Garcia,
  • Tales Alexandre Costa-Silva,
  • Martí Morera Gómez,
  • Fabiano Jares Contesini,
  • Paula Renata Bueno Campos Canella and
  • Patrícia de Oliveira Carvalho

15 January 2023

The enzyme L-asparaginase (L-asparagine amidohydrolase) catalyzes the breakdown of L-asparagine into aspartate and ammonia, which leads to an anti-neoplastic activity stemming from its capacity to deplete L-asparagine concentrations in the bloodstrea...

  • Review
  • Open Access
482 Views
26 Pages

Due to the neuroprotective and antioxidant properties, phenylethanoid glycosides (PhGs) are valuable plant-derived compounds. Traditional extraction methods are constrained by low yields and limited resources, prompting the integration of synthetic b...

  • Review
  • Open Access
28 Citations
13,961 Views
26 Pages

Microbial Cell Factories: Biodiversity, Pathway Construction, Robustness, and Industrial Applicability

  • Rida Chaudhary,
  • Ali Nawaz,
  • Mireille Fouillaud,
  • Laurent Dufossé,
  • Ikram ul Haq and
  • Hamid Mukhtar

12 February 2024

The microbial biosynthesis of proteins, primary metabolites, and chemicals is gaining extraordinary momentum and is presently viewed as an advancing approach in the industrial research sector. Increased threats to the environment and the possibility...

  • Article
  • Open Access
5 Citations
3,826 Views
10 Pages

Production of a Novel Protopanaxatriol-Type Ginsenoside by Yeast Cell Factories

  • Chen Zhou,
  • Ting Gong,
  • Jingjing Chen,
  • Tianjiao Chen,
  • Jinling Yang and
  • Ping Zhu

Ginsenosides, the main active compounds in Panax species, are glycosides of protopanaxadiol (PPD) or protopanaxatriol (PPT). PPT-type ginsenosides have unique pharmacological activities on the central nervous system and cardiovascular system. As an u...

  • Review
  • Open Access
514 Citations
26,760 Views
24 Pages

Elicitation, an Effective Strategy for the Biotechnological Production of Bioactive High-Added Value Compounds in Plant Cell Factories

  • Karla Ramirez-Estrada,
  • Heriberto Vidal-Limon,
  • Diego Hidalgo,
  • Elisabeth Moyano,
  • Marta Golenioswki,
  • Rosa M. Cusidó and
  • Javier Palazon

3 February 2016

Plant in vitro cultures represent an attractive and cost-effective alternative to classical approaches to plant secondary metabolite (PSM) production (the “Plant Cell Factory” concept). Among other advantages, they constitute the only sustainable and...

  • Review
  • Open Access
9 Citations
7,974 Views
16 Pages

Light-Driven Synthetic Biology: Progress in Research and Industrialization of Cyanobacterial Cell Factory

  • Chaofeng Li,
  • Jiyang Zheng,
  • Yushuang Wu,
  • Xiaotong Wang,
  • Hui Shao and
  • Dong Yan

3 October 2022

Light-driven synthetic biology refers to an autotrophic microorganisms-based research platform that remodels microbial metabolism through synthetic biology and directly converts light energy into bio-based chemicals. This technology can help achieve...

  • Review
  • Open Access
135 Citations
17,645 Views
67 Pages

10 July 2021

Among non-conventional yeasts of industrial interest, the dimorphic oleaginous yeast Yarrowia lipolytica appears as one of the most attractive for a large range of white biotechnology applications, from heterologous proteins secretion to cell factori...

  • Article
  • Open Access
34 Citations
4,138 Views
11 Pages

Genetic Modification of Mucor circinelloides to Construct Stearidonic Acid Producing Cell Factory

  • Md. Ahsanul Kabir Khan,
  • Junhuan Yang,
  • Syed Ammar Hussain,
  • Huaiyuan Zhang,
  • Victoriano Garre and
  • Yuanda Song

Stearidonic acid (SDA; 18:4, n-3) is the delta 15-desaturase product of gamma linolenic acid (GLA; 18:3, n-6) and delta 6-desaturase product of alpha linolenic acid (ALA; 18:3, n-3). Construction of engineered oleaginous microbes have been attracting...

  • Review
  • Open Access
122 Citations
24,462 Views
23 Pages

Development of Synechocystis sp. PCC 6803 as a Phototrophic Cell Factory

  • Yi Yu,
  • Le You,
  • Dianyi Liu,
  • Whitney Hollinshead,
  • Yinjie J. Tang and
  • Fuzhong Zhang

13 August 2013

Cyanobacteria (blue-green algae) play profound roles in ecology and biogeochemistry. One model cyanobacterial species is the unicellular cyanobacterium Synechocystis sp. PCC 6803. This species is highly amenable to genetic modification. Its genome ha...

  • Article
  • Open Access
8 Citations
2,757 Views
14 Pages

Construction of Eicosatetraenoic Acid Producing Cell Factory by Genetic Engineering of Mucor circinelloides

  • Chen Wu,
  • Junhuan Yang,
  • Shaoqi Li,
  • Wenyue Shi,
  • Futing Xue,
  • Qing Liu,
  • Tahira Naz,
  • Hassan Mohamed and
  • Yuanda Song

Eicosatetraenoic acid (ETA, 20:4, ω-3) is the desaturation product of dihomo-gamma linolenic acid (DGLA, 20:3, ω-6) catalyzed by delta-17 desaturase, which is considered as a healthy product that helps to lower risk of heart diseases. The oleaginous...

  • Article
  • Open Access
30 Citations
3,546 Views
16 Pages

Raloxifene hydrochloride (RLX), an antiosteoporotic agent, has been utilized for guarding against breast cancer and recently, for the disease management owing to its estrogen antagonist activity. Nevertheless, RLX exhibits poor bioavailability that c...

  • Review
  • Open Access
10 Citations
4,426 Views
30 Pages

Biosynthesis of Edible Terpenoids: Hosts and Applications

  • Mengyu Wang,
  • Zhengyi Zhang,
  • Xinyu Liu,
  • Zhixuan Liu and
  • Ruirui Liu

17 February 2025

Microbial foods include microbial biomass, naturally fermented foods, and heterologously synthesized food ingredients derived from microbial fermentation. Terpenoids, using isoprene as the basic structure, possess various skeletons and functional gro...

  • Article
  • Open Access
29 Citations
4,238 Views
15 Pages

7 December 2021

The establishment of lignocellulosic biorefineries is dependent on microorganisms being able to cope with the stressful conditions resulting from the release of inhibitory compounds during biomass processing. The yeast Kluyveromyces marxianus has bee...

  • Review
  • Open Access
64 Citations
9,422 Views
17 Pages

Metabolic Engineering of Microbial Cell Factories for Biosynthesis of Flavonoids: A Review

  • Hanghang Lou,
  • Lifei Hu,
  • Hongyun Lu,
  • Tianyu Wei and
  • Qihe Chen

27 July 2021

Flavonoids belong to a class of plant secondary metabolites that have a polyphenol structure. Flavonoids show extensive biological activity, such as antioxidative, anti-inflammatory, anti-mutagenic, anti-cancer, and antibacterial properties, so they...

  • Article
  • Open Access
3 Citations
6,712 Views
13 Pages

The glycosyltransferase HisDapGalNAcT2 is the key protein of the Escherichia coli (E. coli) SHuffle® T7 cell factory which was genetically engineered to allow glycosylation of a protein substrate in vivo. The specific activity of the glycosyltransfer...

  • Review
  • Open Access
20 Citations
11,142 Views
19 Pages

4 December 2018

Synthetic biology has undergone dramatic advancements for over a decade, during which it has expanded our understanding on the systems of life and opened new avenues for microbial engineering. Many biotechnological and computational methods have been...

  • Review
  • Open Access
55 Citations
8,487 Views
28 Pages

Bacterial Biopolymer: Its Role in Pathogenesis to Effective Biomaterials

  • Sreejita Ghosh,
  • Dibyajit Lahiri,
  • Moupriya Nag,
  • Ankita Dey,
  • Tanmay Sarkar,
  • Sushil Kumar Pathak,
  • Hisham Atan Edinur,
  • Siddhartha Pati and
  • Rina Rani Ray

12 April 2021

Bacteria are considered as the major cell factories, which can effectively convert nitrogen and carbon sources to a wide variety of extracellular and intracellular biopolymers like polyamides, polysaccharides, polyphosphates, polyesters, proteinaceou...

  • Article
  • Open Access
3 Citations
3,857 Views
16 Pages

Escherichia coli as a New Platform for the Fast Production of Vault-like Nanoparticles: An Optimized Protocol

  • Roger Fernández,
  • Aida Carreño,
  • Rosa Mendoza,
  • Antoni Benito,
  • Neus Ferrer-Miralles,
  • María Virtudes Céspedes and
  • José Luis Corchero

8 December 2022

Vaults are protein nanoparticles that are found in almost all eukaryotic cells but are absent in prokaryotic ones. Due to their properties (nanometric size, biodegradability, biocompatibility, and lack of immunogenicity), vaults show enormous potenti...

  • Review
  • Open Access
22 Citations
7,596 Views
38 Pages

Two-Phase Fermentation Systems for Microbial Production of Plant-Derived Terpenes

  • Tuo Li,
  • Ximeng Liu,
  • Haoyu Xiang,
  • Hehua Zhu,
  • Xuan Lu and
  • Baomin Feng

Microbial cell factories, renowned for their economic and environmental benefits, have emerged as a key trend in academic and industrial areas, particularly in the fermentation of natural compounds. Among these, plant-derived terpenes stand out as a...

  • Article
  • Open Access
4 Citations
2,371 Views
21 Pages

Enhanced Production of High-Value Porphyrin Compound Heme by Metabolic Engineering Modification and Mixotrophic Cultivation of Synechocystis sp. PCC6803

  • Kai Cao,
  • Fengjie Sun,
  • Zechen Xin,
  • Yujiao Cao,
  • Xiangyu Zhu,
  • Huan Tian,
  • Tong Cao,
  • Jinju Ma,
  • Weidong Mu and
  • Chunxiao Meng
  • + 3 authors

23 August 2024

Heme, as an essential cofactor and source of iron for cells, holds great promise in various areas, e.g., food and medicine. In this study, the model cyanobacteria Synechocystis sp. PCC6803 was used as a host for heme synthesis. The heme synthesis pat...

  • Article
  • Open Access
2 Citations
1,437 Views
15 Pages

Genomic and Functional Analysis of a Novel Yeast Cyberlindnera fabianii TBRC 4498 for High-Yield Xylitol Production

  • Pawarin Bonthong,
  • Benjarat Bunterngsook,
  • Wuttichai Mhuantong,
  • Katesuda Aiewviriyasakul,
  • Wipawee Sritusnee,
  • Verawat Champreda and
  • Hataikarn Lekakarn

13 June 2025

The development of yeast cell factories for efficient xylose utilization and xylitol production is crucial for advancing sustainable biotechnological processes. Xylose, a major component of lignocellulosic biomass, presents challenges for microbial c...

  • Review
  • Open Access
1,273 Views
24 Pages

12 October 2025

N-Acetylneuraminic acid (Neu5Ac), the predominant form of sialic acids (Sias), is extensively utilized in the food, pharmaceutical, and cosmetic industries. Microbial fermentation serves as a critical production method for its economical, eco-friendl...

  • Feature Paper
  • Article
  • Open Access
27 Citations
7,098 Views
15 Pages

Techno-Economic Analysis of Automated iPSC Production

  • Bastian Nießing,
  • Raphael Kiesel,
  • Laura Herbst and
  • Robert H. Schmitt

28 January 2021

Induced pluripotent stem cells (iPSC) open up the unique perspective of manufacturing cell products for drug development and regenerative medicine in tissue-, disease- and patient-specific forms. iPSC can be multiplied almost without restriction and...

  • Article
  • Open Access
1 Citations
2,877 Views
14 Pages

Metabolic Engineering of Escherichia coli for De Novo Biosynthesis of Mandelic Acid

  • Chang Liu,
  • Xuefeng Xiao,
  • Wanbin Xing,
  • Rina Na,
  • Yunuo Song,
  • Guoqiang Cao and
  • Pengchao Wang

Mandelic acid (MA) is a valuable α-hydroxy acid with applications in pharmaceuticals, cosmetics, and fine chemicals. While chemical synthesis is well established, concerns over toxicity and sustainability have driven interest in microbial produ...

  • Review
  • Open Access
29 Citations
9,380 Views
23 Pages

State of the Art on the Microbial Production of Industrially Relevant Organic Acids

  • Raffaella Desirè Di Lorenzo,
  • Immacolata Serra,
  • Danilo Porro and
  • Paola Branduardi

19 February 2022

The industrial relevance of organic acids is high; because of their chemical properties, they can be used as building blocks as well as single-molecule agents with a huge annual market. Organic acid chemical platforms can derive from fossil sources b...

  • Review
  • Open Access
6 Citations
5,652 Views
18 Pages

7 September 2023

Natural sugar substitutes are safe, stable, and nearly calorie-free. Thus, they are gradually replacing the traditional high-calorie and artificial sweeteners in the food industry. Currently, the majority of natural sugar substitutes are extracted fr...

  • Review
  • Open Access
5 Citations
4,312 Views
26 Pages

1 October 2024

The last decade has registered a rapid development of new artificial CO2-bioconversion processes mirroring natural CO2-fixation by carboxylation and/or reduction reactions. The development of artificial pathways has shown that we have sufficient tool...

  • Article
  • Open Access
7 Citations
3,958 Views
16 Pages

Recombinant Proteins for Assembling as Nano- and Micro-Scale Materials for Drug Delivery: A Host Comparative Overview

  • José Luis Corchero,
  • Marianna T. P. Favaro,
  • Merce Márquez-Martínez,
  • Jara Lascorz,
  • Carlos Martínez-Torró,
  • Julieta M. Sánchez,
  • Hèctor López-Laguna,
  • Luís Carlos de Souza Ferreira,
  • Esther Vázquez and
  • Eloi Parladé
  • + 2 authors

By following simple protein engineering steps, recombinant proteins with promising applications in the field of drug delivery can be assembled in the form of functional materials of increasing complexity, either as nanoparticles or nanoparticle-leaki...

  • Article
  • Open Access
14 Citations
5,500 Views
13 Pages

Heterologous Expression of Secondary Metabolite Genes in Trichoderma reesei for Waste Valorization

  • Mary L. Shenouda,
  • Maria Ambilika,
  • Elizabeth Skellam and
  • Russell J. Cox

30 March 2022

Trichoderma reesei (Hypocrea jecorina) was developed as a microbial cell factory for the heterologous expression of fungal secondary metabolites. This was achieved by inactivation of sorbicillinoid biosynthesis and construction of vectors for the rap...

  • Review
  • Open Access
15 Citations
10,610 Views
22 Pages

20 July 2024

Nicotinamide mononucleotide (NMN), the direct precursor of nicotinamide adenine dinucleotide (NAD+), is involved in the regulation of many physiological and metabolic reactions in the body. NMN can indirectly affect cellular metabolic pathways, DNA r...

  • Review
  • Open Access
28 Citations
9,962 Views
22 Pages

22 January 2022

Membrane proteins play key roles in most crucial cellular processes, ranging from cell-to-cell communication to signaling processes. Despite recent improvements, the expression of functionally folded membrane proteins in sufficient amounts for functi...

  • Review
  • Open Access
119 Citations
14,204 Views
21 Pages

Lactic acid bacteria (LAB) have a long history of use in the food industry. Some species are part of the normal human microbiota and have beneficial properties for human health. Their long-standing use and considerable biotechnological potential have...

  • Review
  • Open Access
1,836 Views
31 Pages

A Review of the Progress in the Microbial Biosynthesis of Prenylated Aromatic Compounds

  • Min Tang,
  • Wanze Zhang,
  • Yanjie Tian,
  • Jianjun Qiao,
  • Xiaobing Li,
  • Weiguo Li and
  • Qinggele Caiyin

30 September 2025

Prenylated aromatic compounds (PACs) are widely distributed in nature and have important applications in medicine, cosmetics, and food due to their antioxidant, anticancer, and anti-inflammatory activities as well as role in the prevention of neurolo...

  • Article
  • Open Access
7 Citations
8,872 Views
19 Pages

Multifactorial Modeling Reveals a Dominant Role of Wnt Signaling in Lineage Commitment of Human Pluripotent Stem Cells

  • Tiago P. Dias,
  • Tiago G. Fernandes,
  • Maria Margarida Diogo and
  • Joaquim M. S. Cabral

The human primed pluripotent state is maintained by a complex balance of several signaling pathways governing pluripotency maintenance and commitment. Here, we explore a multiparameter approach using a full factorial design and a simple well-defined...

  • Article
  • Open Access
47 Citations
5,807 Views
18 Pages

Design and Optimization of Nanostructured Lipid Carrier Containing Dexamethasone for Ophthalmic Use

  • Eszter L. Kiss,
  • Szilvia Berkó,
  • Attila Gácsi,
  • Anita Kovács,
  • Gábor Katona,
  • Judit Soós,
  • Erzsébet Csányi,
  • Ilona Gróf,
  • András Harazin and
  • Mária Budai-Szűcs
  • + 1 author

The aim of this study was to perform a preformulation study of dexamethasone (DXM)-loaded nanostructured lipid carriers (NLCs) for ocular use. Lipid screening was applied to find the most suitable solid and liquid lipids and surfactant for the NLC fo...

  • Review
  • Open Access
1,640 Views
22 Pages

Expanding the Terpene Universe: Synthetic Biology and Non-Natural Chemistry in Engineered Microorganisms

  • Yueli Hu,
  • Ziyan Yuan,
  • Qian Wang,
  • Ziyan Wang,
  • Jianan Cao,
  • Jiaxin Wu and
  • Xinkun Ren

13 October 2025

Terpenes, representing one of the most extensive classes of natural products, hold significant value in the fields of pharmaceuticals, fragrances, and biofuels. Extracting these compounds from natural sources is often environmentally unsustainable, a...

  • Article
  • Open Access
23 Citations
4,711 Views
18 Pages

The Influence of Polysaccharide Coating on the Physicochemical Parameters and Cytotoxicity of Silica Nanoparticles for Hydrophilic Biomolecules Delivery

  • Tatiana Andreani,
  • Joana F. Fangueiro,
  • Patrícia Severino,
  • Ana Luiza R. de Souza,
  • Carlos Martins-Gomes,
  • Paula M. V. Fernandes,
  • Ana C. Calpena,
  • Maria P. Gremião,
  • Eliana B. Souto and
  • Amélia M. Silva

27 July 2019

The present work reports the effect of polysaccharides (chitosan and sodium alginate) on silica nanoparticles (SiNP) for hydrophilic molecules delivery taking insulin as model drug. The influence of tetraethyl orthosilicate (TEOS) and homogenization...

  • Review
  • Open Access
5 Citations
5,478 Views
49 Pages

Role of Nanocellulose in Light Harvesting and Artificial Photosynthesis

  • Pieter Samyn,
  • Vibhore Kumar Rastogi,
  • Neelisetty Sesha Sai Baba and
  • Jürgen Van Erps

8 June 2023

Artificial photosynthesis has rapidly developed as an actual field of research, mimicking natural photosynthesis processes in plants or bacteria to produce energy or high-value chemicals. The nanocelluloses are a family of biorenewable materials that...

of 16