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14 pages, 2957 KiB  
Article
Histochemical Study of Enzyme Activity in the Digestive Tract of the Small-Spotted Catshark (Scyliorhinus canicula) and the Smooth-Hound (Mustelus mustelus)
by Lucija Devčić, Ivan Vlahek, Magdalena Palić, Valerija Benko, Siniša Faraguna, Marin Lovrić, Damir Valić and Snježana Kužir
Fishes 2025, 10(8), 386; https://doi.org/10.3390/fishes10080386 - 6 Aug 2025
Abstract
The small-spotted catshark and the smooth-hound are cartilaginous, carnivorous fish with similar depth ranges in their habitats. These two species are among the most abundant elasmobranchs in the Adriatic Sea and are frequently caught by local fishermen using longline fishing. Despite their ecological [...] Read more.
The small-spotted catshark and the smooth-hound are cartilaginous, carnivorous fish with similar depth ranges in their habitats. These two species are among the most abundant elasmobranchs in the Adriatic Sea and are frequently caught by local fishermen using longline fishing. Despite their ecological similarities, little is known about the physiological differences in their digestive processes. The study of enzymatic digestion in these ecologically relevant species helps to fill the knowledge gap in the understanding of nutrient processing in cartilaginous fish. Therefore, the aim of this study was to determine, measure and compare the enzymatic activity of alkaline phosphatase, acid phosphatase, non-specific esterase and aminopeptidase. Fish were caught in the central part of the Adriatic Sea between 2021 and 2023. A total of 60 adult individuals were analyzed, with samples taken from six parts of the digestive tract. Histochemical analysis of 1440 slides revealed clear differences in enzyme activity between the two species. In the small-spotted catshark, cellular protein degradation was most pronounced in esophagus, posterior stomach and rectum, whereas in the smooth-hound, it was concentrated in posterior stomach and spiral intestine. Cellular digestion of lipids in the small-spotted catshark appears to occur primarily in the stomach. The results of this study provide new insights into the distribution of cellular digestive enzymes in cartilaginous fish and emphasize the importance of studying the entire digestive tract as an integrated system rather than focusing on individual parts. This study fills an important knowledge gap and contributes to a deeper understanding of digestive physiology, which in turn has implications for species conservation and biological variability. Full article
(This article belongs to the Section Physiology and Biochemistry)
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20 pages, 1682 KiB  
Article
Elasmobranch Species Composition in Otter Trawl Fisheries (Eastern Aegean Sea)
by İlker Aydin, Alexandros Theocharis, Sercan Yapici and Dimitris Klaoudatos
Oceans 2025, 6(2), 34; https://doi.org/10.3390/oceans6020034 - 6 Jun 2025
Viewed by 651
Abstract
The Eastern Aegean Sea hosts a diverse assemblage of elasmobranchs, many of which are vulnerable or endangered. This study presents a fishery-independent assessment of species composition, catch characteristics, and spatial patterns in bottom trawl fisheries between Lesvos Island and Ayvalik. A total of [...] Read more.
The Eastern Aegean Sea hosts a diverse assemblage of elasmobranchs, many of which are vulnerable or endangered. This study presents a fishery-independent assessment of species composition, catch characteristics, and spatial patterns in bottom trawl fisheries between Lesvos Island and Ayvalik. A total of 48 surveys were conducted between September 2022 and October 2024, identifying nine elasmobranch species, with Scyliorhinus canicula (small-spotted catshark) and Mustelus mustelus (common smooth-hound) dominating the catch. Biological parameters, sex ratios, and condition upon capture and release were recorded, while catch per unit effort (CPUE) and diversity indices were used to evaluate temporal patterns. The survival probability was negatively affected by the trawl duration and elevated temperatures, emphasizing the need for mitigation measures. Spatial models revealed high-density zones that likely function as foraging or nursery grounds. Seasonal shifts in community composition were also evident. Many non-commercial species were discarded irrespective of their size or condition. These findings underscore the ecological importance of this understudied region and support the need for spatially explicit, species-specific management strategies, including gear selectivity improvements, seasonal closures, and Electronic Monitoring. The study offers a critical baseline for enhancing the sustainability of elasmobranch populations in the Eastern Mediterranean. Full article
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11 pages, 1175 KiB  
Article
A New Research Tool for Use in Sharks and Rays: Relevance of Reproductive Hormone Levels in the Skin of Small-Spotted Catshark (Scyliorhinus canicula)
by Annaïs Carbajal, Isabel González Lobato, Clara Agustí, Marta Muñoz-Baquero, Paula Serres-Corral and Manel López-Béjar
Animals 2025, 15(5), 762; https://doi.org/10.3390/ani15050762 - 6 Mar 2025
Viewed by 1170
Abstract
The present study marks a significant step forward in validating the use of skin biopsies for measuring reproductive steroid hormones in sharks. Given the conservation concerns surrounding many chondrichthyan species and the growing emphasis on adhering to the 3R principles in wildlife research, [...] Read more.
The present study marks a significant step forward in validating the use of skin biopsies for measuring reproductive steroid hormones in sharks. Given the conservation concerns surrounding many chondrichthyan species and the growing emphasis on adhering to the 3R principles in wildlife research, we should prioritize the acquisition of data through non-destructive or minimally invasive sampling techniques collected remotely. Dart skin biopsy samples can be collected remotely, without the need to chase, capture, and restrain the animal. Accordingly, the present study aimed to (i) develop a suitable extraction and analytical technique for reproductive hormone determination in shark skin biopsies and (ii) evaluate whether sex steroid hormones detected in shark skin differ between males and females and depending on males’ maturity. The results of assay validation demonstrated that the commercial enzyme immunoassay used can provide reliable measures of progesterone, 17β-estradiol, and testosterone measured in shark skin extracts. After ensuring that reproductive hormones are accurately measured in this sample type, we compared hormone levels between males (mature and immature) and females to evaluate the variation in reproductive hormones relative to sex and males’ maturity stage. We detected significant differences in skin hormone levels between sexes, suggesting that this technique may be a promising alternative approach for obtaining relevant biological data in free-ranging sharks. By employing this novel technique, we expect to gain a deeper understanding of the reproductive processes of living chondrichthyans, which is essential for formulating effective science-based conservation and management strategies. Full article
(This article belongs to the Section Animal Welfare)
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14 pages, 1768 KiB  
Article
Expression Analysis of Heavy-Chain-Only Antibodies in Cloudy Catshark and Japanese Bullhead Shark
by Reo Uemura, Susumu Tanimura, Nao Yamaguchi, Ryuichi Kuroiwa, Gabriel Takashi Andrés Tsutsumi, Toshiaki Fujikawa, Kiyoshi Soyano, Kohsuke Takeda and Yoshimasa Tanaka
Mar. Drugs 2025, 23(1), 28; https://doi.org/10.3390/md23010028 - 8 Jan 2025
Cited by 1 | Viewed by 1435
Abstract
Heavy chain-only antibodies in sharks are called immunoglobulin new antigen receptors (IgNAR), consisting of one variable region (VNAR) and five constant regions (C1-C5). The variable region of IgNAR can be expressed as a monomer composed of a single domain, which has antigen specificity [...] Read more.
Heavy chain-only antibodies in sharks are called immunoglobulin new antigen receptors (IgNAR), consisting of one variable region (VNAR) and five constant regions (C1-C5). The variable region of IgNAR can be expressed as a monomer composed of a single domain, which has antigen specificity and is thus gaining attention as a next-generation antibody drug modality. In this study, we analyzed IgNAR of the cloudy catshark and Japanese bullhead shark, small demersal sharks available in the coastal waters of Japan. By analyzing the IgNAR gene sequence and comparing it with the constant regions of five other known shark species, high homology was observed in the C4 region. Consequently, we expressed the recombinant protein of the C4 domain from the cloudy catshark in E. coli, immunized rats, and produced antibodies. The obtained antiserum and mAbs recognized the C4 recombinant protein of the cloudy catshark, but reacted minimally with the plasma of non-immunized cloudy catsharks and instead reacted with the plasma of Japanese bullhead sharks. The results of this study imply that the protein expression levels of IgNAR in cloudy catsharks may be relatively lower compared to those in Japanese bullhead sharks, however, this interpretation remains to be determined through further studies. Full article
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12 pages, 3234 KiB  
Article
Trophic Ecology of the Pyjama Shark Poroderma africanum (Gmelin, 1789) Elucidated by Stable Isotopes
by Luca Caracausi, Zaira Da Ros, Alice Premici, Enrico Gennari and Emanuela Fanelli
Animals 2024, 14(17), 2559; https://doi.org/10.3390/ani14172559 - 3 Sep 2024
Viewed by 1746
Abstract
Sharks may occupy both intermediate and upper levels of marine food webs. They are overfished worldwide and constitute one of the largest portions of the bycatch. The removal of top-predator species has negative cascading effects on the entire food web, causing the “mesopredator [...] Read more.
Sharks may occupy both intermediate and upper levels of marine food webs. They are overfished worldwide and constitute one of the largest portions of the bycatch. The removal of top-predator species has negative cascading effects on the entire food web, causing the “mesopredator release” phenomenon, which leads to an increase in mesopredators with consequent changes in the ecosystem’s energetic balance. Despite their important ecological role, information on their trophic ecology is limited. This essential information can be obtained through the analysis of stomach contents and, more recently, by using less invasive techniques, such as the stable isotope analysis of muscle tissue, obtained through biopsies. Here, we analysed the trophic ecology of the pyjama shark or striped catshark Poroderma africanum, an endemic species of South Africa, by means of SIA. The results obtained from SIA were analysed using the R SIMMR and SIBER packages to estimate the contribution of potential food sources to the diet and to evaluate the extent of the trophic niches. The SIMMR outputs showed that adults select more benthic prey than juveniles, which consume more planktonic species, with juveniles being more generalist than adults, according to SIBER outputs. As assessed by IUCN, the population of P. africanum is increasing, and given its role as mesopredator, future monitoring efforts could be crucial to elucidating their potential effects in marine food webs. Full article
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15 pages, 12002 KiB  
Article
Shark Cartilage-Derived Anti-Angiogenic Peptide Inhibits Corneal Neovascularization
by Yunxian Li, Aoke Chen, An Hong, Sheng Xiong, Xiaojia Chen and Qiuling Xie
Bioengineering 2024, 11(7), 693; https://doi.org/10.3390/bioengineering11070693 - 9 Jul 2024
Cited by 2 | Viewed by 1657
Abstract
Corneal neovascularization is a significant cause of vision loss, often resulting in corneal clouding and chronic inflammation. Shark cartilage is widely recognized as a significant natural source of anti-angiogenic compounds. Our previous studies have shown that a polypeptide from white-spotted catshark (Chiloscyllium [...] Read more.
Corneal neovascularization is a significant cause of vision loss, often resulting in corneal clouding and chronic inflammation. Shark cartilage is widely recognized as a significant natural source of anti-angiogenic compounds. Our previous studies have shown that a polypeptide from white-spotted catshark (Chiloscyllium plagiosum Bonnet) has the potential to inhibit the angiogenesis of breast tumors. This study applied this peptide (SAIF) to a corneal alkali injury model to assess its effect on corneal neovascularization. Results revealed that SAIF inhibits endothelial cell proliferation, migration, and tube formation. SAIF inhibited VEGF-induced angiogenesis in the matrigel plug. Using the corneal alkali injury model, SAIF significantly inhibited corneal vascular neovascularization in mice. We found that SAIF not only significantly inhibited the upregulation of pro-angiogenic factors such as VEGF, bFGF, and PDGF expression induced by alkali injury, but also promoted the expression of anti-angiogenesis factor PEDF. Moreover, we also analyzed the MMPs and TIMPs involved in extracellular matrix (ECM) remodeling, angiogenesis, and lymphangiogenesis. We found that SAIF treatment inhibited the expression of pro-angiogenic factors like MMP1, MMP2, MMP3, MMP9, MMP13, and MMP14, and promoted the expression of anti-angiogenesis factors such as MMP7, TIMP1, TIMP2, and TIMP3. In conclusion, SAIF acts as an anti-angiogenic factor to inhibit the proliferation, migration, and tube formation of endothelial cells, inhibit pro-angiogenic factors, promote anti-angiogenic factors, and regulate the expression of MMPs, ultimately inhibiting corneal neovascularization. Full article
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14 pages, 2237 KiB  
Article
Utilization of Blackmouth Catshark (Galeus melastomus) Skins as an Alternative Source of Gelatin: Extraction and Physicochemical Characterization in Comparison to Porcine Skin Gelatin
by Panayotis D. Karayannakidis, Soumela E. Chatziantoniou and Chong M. Lee
Biomass 2024, 4(2), 349-362; https://doi.org/10.3390/biomass4020017 - 6 May 2024
Cited by 1 | Viewed by 1533
Abstract
The present study investigated the potential use of blackmouth catshark (Galeus melastomus) skins for gelatin production by employing a combined alkaline and acidic process. The yield of dry gelatin was relatively high (13.95%), showing a high protein content (87.80%), but low [...] Read more.
The present study investigated the potential use of blackmouth catshark (Galeus melastomus) skins for gelatin production by employing a combined alkaline and acidic process. The yield of dry gelatin was relatively high (13.95%), showing a high protein content (87.80%), but low moisture (10.64%), ash (1.34%) and lipid (0.03%) contents, on a wet weight basis. Fish skin gelatin showed better color properties (>L*, <+b* values) than porcine skin gelatin and exhibited similar gel strength (315.4 g) and higher viscosity (5.90 cP) than the latter (p < 0.05). Although the electrophoretic study revealed that fish skin gelatin was degraded to a lesser extent than its mammalian counterpart, the resulting fish skin gelatin gels melted at a significantly lower temperature (Tm = 21.5 °C), whereas the reverse process (i.e., gelling) also occurred at a lower temperature (Ts = 10.6 °C) and required more time (ts = 29.5 min) compared to porcine skin gelatin gels (Tm = 30.4 °C, Ts = 19.4 °C and ts = 20.7 min). These differences were attributed to the different imino acid content, which was greater in mammalian gelatin (p < 0.05). The results suggested that the skins from blackmouth catshark can be potentially used as an alternative raw material for gelatin production, which will fill the needs of more diverse cultures that do not consume pork- or cow-related products. Full article
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19 pages, 2334 KiB  
Article
Proteomic Insights into Seminal Plasma and Spermatozoa Proteins of Small-Spotted Catsharks, Scyliorhinus canicula: Implications for Reproductive Conservation in Aquariums
by Marta Muñoz-Baquero, Laura Lorenzo-Rebenaque, Ximo García-Domínguez, Jesús Valdés-Hernández, Daniel García-Párraga, Clara Marin, Francisco Alberto García-Vázquez and Francisco Marco-Jiménez
Animals 2024, 14(9), 1281; https://doi.org/10.3390/ani14091281 - 24 Apr 2024
Cited by 2 | Viewed by 1742
Abstract
In the ex situ conservation of chondrichthyan species, successful reproduction in aquaria is essential. However, these species often exhibit reduced reproductive success under human care. A key aspect is that conventional sperm analyses do not provide insights into the functional competence of sperm. [...] Read more.
In the ex situ conservation of chondrichthyan species, successful reproduction in aquaria is essential. However, these species often exhibit reduced reproductive success under human care. A key aspect is that conventional sperm analyses do not provide insights into the functional competence of sperm. However, proteomics analysis enables a better understanding of male physiology, gaining relevance as a powerful tool for discovering protein biomarkers related to fertility. The present work aims to build the first proteome database for shark semen and to investigate the proteomic profiles of seminal plasma and spermatozoa from small-spotted catsharks (Scyliorhinus canicula) related to the underlying adaptations to both natural and aquarium environments, thereby identifying the reproductive impact in aquarium specimens. A total of 305 seminal plasma and 535 spermatozoa proteins were identified. Among these, 89 proteins (29.2% of the seminal plasma set) were common to both spermatozoa and seminal plasma. In the seminal plasma, only adenosylhomocysteinase protein showed differential abundance (DAP) between wild and aquarium animals. With respect to the spermatozoa proteins, a total of 107 DAPs were found between groups. Gene Ontology enrichment analysis highlighted the primary functional roles of these DAPs involved in oxidoreductase activity. Additionally, KEGG analysis indicated that these DAPs were primarily associated with metabolic pathways and carbon metabolism. In conclusion, we have successfully generated an initial proteome database for S. canicula seminal plasma and spermatozoa. Furthermore, we have identified protein variations, predominantly within spermatozoa, between aquarium and wild populations of S. canicula. These findings provide a foundation for future biomarker discovery in shark reproduction studies. However, additional research is required to determine whether these protein variations correlate with reproductive declines in captive sharks. Full article
(This article belongs to the Special Issue Conservation and Sperm Quality in Domestic Animals)
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14 pages, 2549 KiB  
Article
Presence and Potential Effects of Microplastics in the Digestive Tract of Two Small Species of Shark from the Balearic Islands
by Susana Torres, Montserrat Compa, Antonio Box, Samuel Pinya and Antoni Sureda
Fishes 2024, 9(2), 55; https://doi.org/10.3390/fishes9020055 - 29 Jan 2024
Cited by 8 | Viewed by 3603
Abstract
In recent years, there has been an increase in the reporting of plastic pollution in the marine environment and its effects on marine animals, especially bony fish. However, the prevalence and effect, particularly concerning biomarkers of oxidative stress, in elasmobranchs remain underreported and [...] Read more.
In recent years, there has been an increase in the reporting of plastic pollution in the marine environment and its effects on marine animals, especially bony fish. However, the prevalence and effect, particularly concerning biomarkers of oxidative stress, in elasmobranchs remain underreported and unknown. In this study, microplastics were observed in two elasmobranch species from the Balearic Islands: the small-spotted catshark (Scyliorhinus canicula) with an average of 4.38 ± 1.77 items per individual, and the blackmouth catshark (Galeus melastomus) with an average of 8.31 ± 2.46 items per individual. Moreover, for the first time, antioxidant and pro-inflammatory responses were determined in the digestive tract of individuals of both species. Specifically, the activation of antioxidant defences, mainly superoxide dismutase activity and glutathione levels, was observed, while the pro-inflammatory marker myeloperoxidase activity was also greater in individuals with a high abundance of microplastic items. Additionally, a significant increase in glutathione S-transferase activity in catsharks with high microplastic ingestion was evidenced, suggesting that the detoxification process was activated. Overall, the results of this study highlight that both catshark species are ingesting microplastics, which, in turn, are causing physiological effects at a cellular level. Considering this, continued monitoring of these species should include the presence of microplastics, and the results from this study can serve as baseline data for future research. Full article
(This article belongs to the Section Environment and Climate Change)
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28 pages, 3972 KiB  
Article
Mass Spectrometry Analysis of Shark Skin Proteins
by Etty Bachar-Wikstrom, Braham Dhillon, Navi Gill Dhillon, Lisa Abbo, Sara K. Lindén and Jakob D. Wikstrom
Int. J. Mol. Sci. 2023, 24(23), 16954; https://doi.org/10.3390/ijms242316954 - 29 Nov 2023
Cited by 3 | Viewed by 2659
Abstract
The mucus layer covering the skin of fish has several roles, including protection against pathogens and mechanical damage in which proteins play a key role. While proteins in the skin mucus layer of various common bony fish species have been explored, the proteins [...] Read more.
The mucus layer covering the skin of fish has several roles, including protection against pathogens and mechanical damage in which proteins play a key role. While proteins in the skin mucus layer of various common bony fish species have been explored, the proteins of shark skin mucus remain unexplored. In this pilot study, we examine the protein composition of the skin mucus in spiny dogfish sharks and chain catsharks through mass spectrometry (NanoLC-MS/MS). Overall, we identified 206 and 72 proteins in spiny dogfish (Squalus acanthias) and chain catsharks (Scyliorhinus retifer), respectively. Categorization showed that the proteins belonged to diverse biological processes and that most proteins were cellular albeit a significant minority were secreted, indicative of mucosal immune roles. The secreted proteins are reviewed in detail with emphasis on their immune potentials. Moreover, STRING protein–protein association network analysis showed that proteins of closely related shark species were more similar as compared to a more distantly related shark and a bony fish, although there were also significant overlaps. This study contributes to the growing field of molecular shark studies and provides a foundation for further research into the functional roles and potential human biomedical implications of shark skin mucus proteins. Full article
(This article belongs to the Special Issue Molecular Research on Skin Disease: From Pathology to Therapy)
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18 pages, 5555 KiB  
Article
Identification of Novel Glycans in the Mucus Layer of Shark and Skate Skin
by Etty Bachar-Wikstrom, Kristina A. Thomsson, Carina Sihlbom, Lisa Abbo, Haitham Tartor, Sara K. Lindén and Jakob D. Wikstrom
Int. J. Mol. Sci. 2023, 24(18), 14331; https://doi.org/10.3390/ijms241814331 - 20 Sep 2023
Cited by 6 | Viewed by 4671
Abstract
The mucus layer covering the skin of fish has several roles, including protection against pathogens and mechanical damage. While the mucus layers of various bony fish species have been investigated, the composition and glycan profiles of shark skin mucus remain relatively unexplored. In [...] Read more.
The mucus layer covering the skin of fish has several roles, including protection against pathogens and mechanical damage. While the mucus layers of various bony fish species have been investigated, the composition and glycan profiles of shark skin mucus remain relatively unexplored. In this pilot study, we aimed to explore the structure and composition of shark skin mucus through histological analysis and glycan profiling. Histological examination of skin samples from Atlantic spiny dogfish (Squalus acanthias) sharks and chain catsharks (Scyliorhinus retifer) revealed distinct mucin-producing cells and a mucus layer, indicating the presence of a functional mucus layer similar to bony fish mucus albeit thinner. Glycan profiling using liquid chromatography–electrospray ionization tandem mass spectrometry unveiled a diverse repertoire of mostly O-glycans in the mucus of the two sharks as well as little skate (Leucoraja erinacea). Elasmobranch glycans differ significantly from bony fish, especially in being more sulfated, and some bear resemblance to human glycans, such as gastric mucin O-glycans and H blood group-type glycans. This study contributes to the concept of shark skin having unique properties and provides a foundation for further research into the functional roles and potential biomedical implications of shark skin mucus glycans. Full article
(This article belongs to the Section Molecular Biology)
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16 pages, 2694 KiB  
Article
Bioaccumulation of Trace Elements in the Muscle of the Blackmouth Catshark Galeus melastomus from Mediterranean Waters
by Samira Gallo, Gianluca Nania, Valentina Caruso, Giorgia Zicarelli, Francesco Luigi Leonetti, Gianni Giglio, Giorgio Fedele, Chiara Romano, Massimiliano Bottaro, Olga Mangoni, Danilo Scannella, Sergio Vitale, Fabio Falsone, Giacomo Sardo, Michele Luca Geraci, Alessandra Neri, Letizia Marsili, Cecilia Mancusi, Donatella Barca and Emilio Sperone
Biology 2023, 12(7), 951; https://doi.org/10.3390/biology12070951 - 3 Jul 2023
Cited by 6 | Viewed by 2624
Abstract
Environmental pollution, particularly in the marine environment, has become a significant concern due to the increasing presence of pollutants and their adverse effects on ecosystems and human health. This study focuses on the bioaccumulation of trace elements in the muscle tissue of the [...] Read more.
Environmental pollution, particularly in the marine environment, has become a significant concern due to the increasing presence of pollutants and their adverse effects on ecosystems and human health. This study focuses on the bioaccumulation of trace elements in the muscle tissue of the blackmouth catshark (Galeus melastomus) from different areas in the Mediterranean Sea. Trace elements are of interest due to their persistence, toxicity, and potential for bioaccumulation. This research aims to assess the distribution and accumulation of trace elements in the muscle tissue of G. melastomus and investigate their potential impact on the deep-sea environment of the Mediterranean. The focused areas include the Ligurian Sea, the northern and central Tyrrhenian Sea, the southern Tyrrhenian Sea, the Ionian Sea, the Pantelleria Waters, and the Gela Waters. Samples were collected following established protocols, and trace element analysis was conducted using inductively coupled plasma mass spectrometry. The study provides data on the concentrations of 17 trace elements, namely aluminum, arsenic, cadmium, cobalt, copper, manganese, molybdenum, nickel, zinc, selenium, strontium, lead, chromium, iron, barium, bismuth, and uranium. The findings contribute to a better understanding of trace element bioaccumulation patterns in elasmobranch species, specifically G. melastomus, and highlight the potential risks associated with chemical contamination in the Mediterranean Sea. This research emphasizes the importance of studying the impacts of pollutants on marine organisms, particularly those occupying key ecological roles, like sharks, to support effective conservation and management strategies. Full article
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16 pages, 1423 KiB  
Article
Molecular Taxonomy of South Africa’s Catsharks: How Far Have We Come?
by Michaela van Staden, David A. Ebert, Enrico Gennari, Rob W. Leslie, Meaghen E. McCord, Matthew Parkinson, Ralph G. A. Watson, Sabine Wintner, Charlene da Silva and Aletta E. Bester-van der Merwe
Diversity 2023, 15(7), 828; https://doi.org/10.3390/d15070828 - 1 Jul 2023
Cited by 3 | Viewed by 2399
Abstract
The ability to correctly identify specimens at the species level is crucial for assessing and conserving biodiversity. Despite this, species-specific data are lacking for many of South Africa’s catsharks due to a high level of morphological stasis. As comprehensive and curated DNA reference [...] Read more.
The ability to correctly identify specimens at the species level is crucial for assessing and conserving biodiversity. Despite this, species-specific data are lacking for many of South Africa’s catsharks due to a high level of morphological stasis. As comprehensive and curated DNA reference libraries are required for the reliable identification of specimens from morphologically similar species, this study reviewed and contributed to the availability of cytochrome c oxidase subunit I (COI) and nicotinamide adenine dehydrogenase subunit 2 (NADH2) sequences for South Africa’s catsharks. A molecular taxonomic approach, implementing species delimitation and specimen assignment methods, was used to assess and highlight any taxonomic uncertainties and/or errors in public databases. The investigated species were summarised into 47 molecular operational taxonomic units (MOTUs), with some conflicting specimen assignments. Two Apristurus specimens sampled in this study remained unidentified, revealing the presence of previously undocumented genetic diversity. In contrast, haplotype sharing within Haploblepharus—attributed to nucleotide ambiguities—resulted in the delimitation of three congeners into a single MOTU. This study reveals that molecular taxonomy has the potential to flag undocumented species and/or misidentified specimens, and further highlights the need to implement integrated taxonomic assessments on catsharks that represent an irreplaceable component of biodiversity in the region. Full article
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18 pages, 5315 KiB  
Article
Distribution of Brain-Derived Neurotrophic Factor in the Brain of the Small-Spotted Catshark Scyliorhinus canicula, and Evolution of Neurotrophins in Basal Vertebrates
by Elena Chiavacci, Sara Bagnoli, Alessandro Cellerino and Eva Terzibasi Tozzini
Int. J. Mol. Sci. 2023, 24(11), 9495; https://doi.org/10.3390/ijms24119495 - 30 May 2023
Cited by 2 | Viewed by 2379
Abstract
Neurotrophins (NTFs) are structurally related neurotrophic factors essential for differentiation, survival, neurite outgrowth, and the plasticity of neurons. Abnormalities associated with neurotrophin-signaling (NTF-signaling) were associated with neuropathies, neurodegenerative disorders, and age-associated cognitive decline. Among the neurotrophins, brain-derived neurotrophic factor (BDNF) has the highest [...] Read more.
Neurotrophins (NTFs) are structurally related neurotrophic factors essential for differentiation, survival, neurite outgrowth, and the plasticity of neurons. Abnormalities associated with neurotrophin-signaling (NTF-signaling) were associated with neuropathies, neurodegenerative disorders, and age-associated cognitive decline. Among the neurotrophins, brain-derived neurotrophic factor (BDNF) has the highest expression and is expressed in mammals by specific cells throughout the brain, with particularly high expression in the hippocampus and cerebral cortex. Whole genome sequencing efforts showed that NTF signaling evolved before the evolution of Vertebrates; thus, the shared ancestor of Protostomes, Cyclostomes, and Deuterostomes must have possessed a single ortholog of neurotrophins. After the first round of whole genome duplication that occurred in the last common ancestor of Vertebrates, the presence of two neurotrophins in Agnatha was hypothesized, while the monophyletic group of cartilaginous fishes, or Chondrichthyans, was situated immediately after the second whole genome duplication round that occurred in the last common ancestor of Gnathostomes. Chondrichthyans represent the outgroup of all other living jawed vertebrates (Gnathostomes) and the sister group of Osteichthyans (comprehensive of Actinopterygians and Sarcopterygians). We were able to first identify the second neurotrophin in Agnatha. Secondly, we expanded our analysis to include the Chondrichthyans, with their strategic phylogenetic position as the most basal extant Gnathostome taxon. Results from the phylogenetic analysis confirmed the presence of four neurotrophins in the Chondrichthyans, namely the orthologs of the four mammalian neurotrophins BDNF, NGF, NT-3, and NT-4. We then proceeded to study the expression of BDNF in the adult brain of the Chondrichthyan Scyliorhinus canicula. Our results showed that BDNF is highly expressed in the S. canicula brain and that its expression is highest in the Telencephalon, while the Mesencephalic and Diencephalic areas showed expression of BDNF in isolated and well-defined cell groups. NGF was expressed at much lower levels that could be detected by PCR but not by in situ hybridization. Our results warrant further investigations in Chondrichthyans to characterize the putative ancestral function of neurotrophins in Vertebrates. Full article
(This article belongs to the Special Issue New Insights to Biological Functions of Neurotrophins)
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16 pages, 344 KiB  
Review
Exploring the Impact of Contaminants of Emerging Concern on Fish and Invertebrates Physiology in the Mediterranean Sea
by Federica Impellitteri, Cristiana Roberta Multisanti, Polina Rusanova, Giuseppe Piccione, Francesca Falco and Caterina Faggio
Biology 2023, 12(6), 767; https://doi.org/10.3390/biology12060767 - 24 May 2023
Cited by 80 | Viewed by 5318
Abstract
In this historical context, the Mediterranean Sea faces an increasing threat from emerging pollutants such as pharmaceuticals, personal care products, heavy metals, pesticides and microplastics, which pose a serious risk to the environment and human health. In this regard, aquatic invertebrates and fish [...] Read more.
In this historical context, the Mediterranean Sea faces an increasing threat from emerging pollutants such as pharmaceuticals, personal care products, heavy metals, pesticides and microplastics, which pose a serious risk to the environment and human health. In this regard, aquatic invertebrates and fish are particularly vulnerable to the toxic effects of these pollutants, and several species have been identified as bio-indicators for their detection. Among these, bivalve molluscs and elasmobranchs are now widely used as bio-indicators to accurately assess the effects of contaminants. The study focuses on the catshark Scyliorhinus canicular and on the Mediterranean mussel Mytilus galloprovincialis. The first one is a useful indicator of localised contamination levels due to its exposure to pollutants that accumulate on the seabed. Moreover, it has a high trophic position and plays an important role in the Mediterranean Sea ecosystem. The bivalve mollusc Mytilus galloprovincialis, on the other hand, being a filter-feeding organism, can acquire and bioaccumulate foreign particles present in its environment. Additionally, because it is also a species of commercial interest, it has a direct impact on human health. In conclusion, the increasing presence of emerging pollutants in the Mediterranean Sea is a serious issue that requires immediate attention. Bivalve molluscs and elasmobranchs are two examples of bio-indicators that must be used to precisely determine the effects of these pollutants on the marine ecosystem and human health. Full article
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