Search Results (650)

The effect of periodical heatwaves and related thermal stratification in freshwater aquatic ecosystems has been a hot research issue. A large dataset of samples was generated from samples exposed to temporary thermal stratification in mesocosms mimicking shallow eutrophic freshwater lakes. Temperature regimes were based on IPCC climate warming scenarios, enabling simulation of future warming conditions. Surface oxygen levels reached 19.37 mg/L, while bottom layers dropped to 0.07 mg/L during stratification. Analysis by FlowCAM revealed dominance of Cyanobacteria under ambient conditions (up to 99.2%), while Cryptophyta (up to 98.9%) and Chlorophyta (up to 99.9%) were predominant in the A2 and A2+50% climate scenarios, respectively. We identified temperature changes and shifts in nutrient concentrations, particularly phosphate, as critical factors in microbial community composition. Furthermore, five distinct Microcystis morphospecies identified by FlowCAM-based analysis were associated with different microbial clusters. The combined use of imaging flow cytometry, which differentiates phytoplankton based on morphological parameters, and nanopore long-read sequencing analysis has shed light into the dynamics of microbial communities associated with different Microcystis morphospecies. In our observations, a peak of algicidal bacteria abundance often coincides with or is followed by a decline in the Cyanobacteria. These findings highlight the importance of species-level classification in the analysis of complex ecosystem interactions and the dynamics of algal blooms in freshwater bodies in response to anthropogenic effects and climate change. Full article

Water environments and sediments are important reservoirs for antibiotic resistance genes (ARGs). Under the pressure of antibiotics, ARGs can transform between microorganisms. Lanthanum-modified bentonite (LMB) is a phosphorus passivation material with good prospects in water environment restoration. After a treatment with LMB, the phosphorus forms in water and sediments will change, which may have an impact on microorganisms and the transmission of ARGs. To investigate the effects of LMB and antibiotics on ARGs and bacterial communities in sediment and aquatic environments, LMB and tetracycline (Tet) were added individually and in combination to mixed samples of sediment and water. The results showed that the addition of either LMB or Tet increased the abundance of intI1 and tetA genes in both the sediment and water, with the Tet addition increasing ARGs to more than 1.5 times the abundance in the control group. However, when LMB and Tet were present simultaneously, the abundance of ARGs showed no significant difference compared to the control group. Tet and LMB also affected the bacterial community structure and function in the samples and had different effects on the sediment and water. A correlation analysis revealed that the potential host bacteria of the intI1 and tetA genes were unclassified_Geobacteraceae, Geothrix, Flavobacterium, Anaeromyxobacter, and Geothermobacter. These findings indicate that Tet or LMB may increase the dissemination of ARGs by affecting microbial communities, while LMB may reduce the impact of Tet through adsorption, providing a reference for the safety of the LMB application in the environment and its other effects (alleviating antibiotic pollution) in addition to phosphorus removal. Full article

Microplastic particles (MPs) are an emerging global pollutant of increasing concern due to their widespread occurrence, persistence, and multifaceted impact on aquatic ecosystems. This study provides a comprehensive review of peer-reviewed literature from 2011 to 2025, analysing the presence, distribution, and microbiological associations of MPs in surface waters across five continents. The findings confirm that MPs are present in both marine and freshwater systems, with concentrations varying by region, hydrology, and proximity to anthropogenic sources. Polyethylene and polypropylene were identified as the most common polymers, often enriched in river mouths, estuaries, and aquaculture zones. A key focus of this review is the plastisphere—microbial biofilms colonizing MPs—which includes both environmental and pathogenic bacteria such as Vibrio, Pseudomonas, and Acinetobacter. Notably, MPs serve as vectors for the spread of antibiotic resistance genes (ARGs), including sul1, tetA and ermF, and β-lactamase genes like blaCTX-M. This highlights their role in enhancing horizontal gene transfer and microbial dissemination. The results emphasize the need for standardized monitoring protocols and further interdisciplinary research. In light of the One Health approach, understanding the microbial dimension of MP pollution is essential for managing risks to environmental and public health. Full article

Korean rockfish, Sebastes schlegeli, a coastal species, is vulnerable to pollutants such as microplastics and bacteria. While interactions between microplastics and other pollutants have been studied, little is known about microplastic and bacteria interactions. This study examined the effects of combined exposure to polystyrene microplastics in the form of microbeads (MB; 0.2 µm, 5 and 50 beads/L) and Streptococcus iniae (1 × 10⁵ and 1 × 10⁷ CFU/mL) for five days on oxidative stress and apoptosis in Korean rockfish. We assessed the mRNA expression and activity of oxidative stress markers (SOD, CAT, H₂O₂, NO, CYP1A1, GST), plasma LPO levels, and caspase-3 expression in liver tissue. Co-exposure to high MB and S. iniae concentrations significantly elevated oxidative stress and apoptosis markers, suggesting enhanced toxicity. This may result from MB facilitating pathogen transport into the fish, indicating microplastics can act as vectors for bacterial infection in aquatic environments. Full article

The spotted longbarbel catfish, Hemibagrus guttatus, a nationally protected Class II species in China, faces increasing threats from habitat degradation. Recently, the spotted longbarbel catfish has gained attention as a promising aquaculture species, not only for its premium flesh quality but also for its potential role in conservation through sustainable captive breeding programs. Ammonia nitrogen (ammonia-N) is a ubiquitous byproduct of intensive farming and serves as the primary environmental stressor confronting aquatic species. Elucidating the ammonia-N tolerance of spotted longbarbel catfish constitutes a critical prerequisite for its successful domestication, which is the aim of this study. We demonstrate that ammonia-N stress significantly decreases the survival rate of spotted longbarbel catfish and induces tissue damage, including gill lamella proliferation, hepatocyte blurring, and renal necrosis. Transcriptomic analysis revealed that ammonia-N stress promotes the expression of genes related to endoplasmic reticulum stress, heat-shock proteins, immune response, and apoptosis, while inhibiting antioxidant-related genes and Wnt-related genes. Enzymatic assays indicate that ammonia-N stress inhibits the activities of multiple antioxidant enzymes, including SOD, CAT, GSH, GSH-Px, and T-AOC. Microbiome analysis showed that ammonia-N stress altered the intestinal microbial community by increasing harmful bacteria (e.g., Vibrio and Aeromonas) and suppressing beneficial bacteria (e.g., Cetobacterium and Lactococcus). These findings highlight the comprehensive negative impacts of ammonia-N on the health of the spotted longbarbel catfish and provide a theoretical basis for optimizing aquaculture conditions to support the sustainable protection and domestication of the spotted longbarbel catfish. Full article

The growth of aquaculture production in recent years has revealed multiple challenges, including the rise of antimicrobial resistance (AMR) in aquatic animal production, which is currently attracting significant attention from multiple one-health stakeholders. While antibiotics have played a major role in the treatment of bacterial infections for almost a century, a major consequence of their use is the increase in AMR, including the emergence of AMR in aquaculture. The AMR phenomenon creates a situation where antibiotic use in one system (e.g., aquaculture) may impact another system (e.g., terrestrial–human). Non-prudent use of antibiotics in aquaculture and animal farming increases the risk of AMR emergence, since bacteria harboring antibiotic resistance genes can cross between compartments such as wastewater or other effluents to aquatic environments, including intensive aquaculture. Transferable antimicrobial resistance gene (AMG) elements (plasmids, transposons, integrons, etc.) have already been detected in varying degrees from pathogenic bacteria that are often causing infections in farmed fish (Aeromonas, Vibrio, Streptococcus, Pseudomonas, Edwardsiella, etc.). This review of current veterinary approaches for the prevention and control of AMR emergence in aquaculture focuses on the feasibility of alternatives to antimicrobials and supplemental treatment applications during on-farm bacterial disease control and prevention. The use of vaccines, bacteriophages, biosurfactants, probiotics, bacteriocins, and antimicrobial peptides is discussed. Full article

Microcystins (MCs) are the most toxic and abundant cyanotoxins found in natural waters during harmful cyanobacterial blooms. These toxins pose a significant threat to plant, animal, and human health due to their toxicity. Degradation of MCs by MC-degrading bacteria is a promising method for controlling these toxins, demonstrating safety, high efficiency, and cost-effectiveness. In this study, we isolated potential MC-degrading bacteria (strains TA13, TA14, and TA19) from Lake Kasumigaura in Japan and found that they possess a high capacity for MC degradation. Based on 16S rRNA gene sequencing, all three isolated strains were identified as belonging to the Klebsiella species. These bacteria effectively degraded MC-RR, MC-YR, and MC-LR under various temperature and pH conditions within 10 h, with the highest degrading activity and degradation rate observed at 40 °C. Furthermore, the isolated strains efficiently degraded MCs not only under neutral pH conditions, but also in alkaline environments. Additionally, we detected the MC-degrading gene (mlrA) in all three isolated strains, marking the first report of the mlrA gene in Klebsiella species. The copy number of the mlrA gene in the strains increased after exposure to MCs. These findings indicate that strains TA13, TA14, and TA19 significantly contribute of MC bioremediation in Lake Kasumigaura during cyanobacterial blooms. Full article

Changes in the aquatic ecological environment have a significant impact on aquaculture efficiency. In order to understand the changes in water quality and the dynamics of microalgae and bacteria in the process of aquaculture, 16S rRNA and 18S rRNA high-throughput sequencing technologies were used to determine the microorganisms in a red tilapia (Oreochromis sp.) aquaculture pond. During the breeding period (from 6 July 2023 to 13 November 2023), water samples were collected from three ponds, on average once every 20 days. The results of water quality analysis showed that at the end of culture (13 November 2023), the concentrations of NH₄⁺-N and NO₂⁻-N increased significantly, and both the air temperature (36.00 ± 0.00 to 21 ± 0.00 °C) and water temperature (32.83 ± 0.29 to 22.75 ± 0.42 °C) decreased significantly. The NH₄⁺-N and NO₂⁻-N concentrations increased by 597% (0.67 ± 0.17 to 4.67 ± 0.33 mg/L) and 782% (0.34 ± 0.16 to 3.00 ± 1.15 mg/L), respectively, from T1 to T6. Bacterial diversity decreased to T3 and then increased. The relative abundance of hgcI_clade (from 14.91% to 7.18%) and CL500-29_marine_group (from 3.35% to 1.39%) in aquaculture water generally decreased with the extension of aquaculture time. The abundance of Komma increased from T1 (1.44%) to T3 (13.90%) and decreased from T3 to T6 (4.21%). The pH, dissolved oxygen concentration, and temperature were main factors affecting the dynamics of bacteria, while dissolved oxygen, NH₄⁺-N, and NO₂⁻-N concentrations affected that of microalgae. In conclusion, this study revealed regime shift in the water quality and microalgal–bacterial community with increasing culture time in red tilapia aquaculture ponds. Full article

Background: Antimicrobial resistance (AMR) is a growing global health concern, driven in part by the environmental release of antimicrobial-resistant bacteria (ARB) and antimicrobial resistance genes (ARGs). Aquatic systems, particularly those exposed to urban, agricultural, and industrial activity, are recognized as hotspots for AMR evolution and transmission. In Chile, the Aconcagua River—subject to multiple anthropogenic pressures—offers a representative model for studying the environmental dimensions of AMR. Methods: Thirteen surface water samples were collected along the Aconcagua River basin in a single-day campaign to avoid temporal bias. Samples were filtered through 0.22 μm membranes and cultured on MacConkey agar, either unsupplemented or supplemented with ceftazidime (CAZ) or ciprofloxacin (CIP). Isolates were purified and identified using MALDI-TOF mass spectrometry. Antibiotic susceptibility was evaluated using the Kirby–Bauer disk diffusion method in accordance with CLSI guidelines. Carbapenemase activity was assessed using the Blue-Carba test, and PCR was employed for the detection of the bla_VIM, bla_KPC, bla_NDM, and bla_IMP genes. Results: A total of 104 bacterial morphotypes were isolated; 80 were identified at the species level, 5 were identified at the genus level, and 19 could not be taxonomically assigned using MALDI-TOF. Pseudomonas (40 isolates) and Aeromonas (25) were the predominant genera. No growth was observed on CIP plates, while 24 isolates were recovered from CAZ-supplemented media, 87.5% of which were resistant to aztreonam. Five isolates exhibited resistance to carbapenems; two tested positive for carbapenemase activity and carried the bla_VIM gene. Conclusions: Our results confirm the presence of clinically significant resistance mechanisms, including bla_VIM, in environmental Pseudomonas spp. from the Aconcagua River. These findings highlight the need for environmental AMR surveillance and reinforce the importance of adopting a One Health approach to antimicrobial stewardship and wastewater regulation. Full article

Wastewater treatment plays a very important role in striving to reach the internationally agreed United Nations (UN) sustainable development goals. One of the critical challenges in achieving Sustainable Development Goal 6 is the effective removal of micropollutants (MPs), including microplastics, organic contaminants, and pharmaceuticals, from wastewater. Additionally, the presence of biological hazards such as antibiotic resistance genes (ARGs), antibiotic-resistant bacteria (ARBs), parasites, and their eggs poses significant risks to public health and aquatic ecosystems. The forthcoming European Union (EU) wastewater directive mandates the implementation of quaternary treatment processes to effectively remove micropollutants (MPOs) from wastewater. This regulatory shift underscores the need for advanced treatment technologies capable of addressing emerging contaminants to ensure environmental and public health protection. This paper presents a critical review of the present situation concerning the fate of MPOs and possible methods of their removal. Based on their experimental research, the authors propose electron beam (EB) technology as a universal solution for the treatment of wastewater and sludge. The findings demonstrate that this approach effectively meets the emerging regulatory requirements for the removal of micropollutants and biological hazards. Full article

With the growing problem of global water pollution, nitrogen pollution has become a key factor affecting aquatic ecosystems and human health. The biological sponge iron system (BSIS) has gained attention as a research hotspot due to its efficient denitrification capability. This study focused on the changes in microbial community structure and the relative abundance and interrelationships of nitrogen cycle-related functional bacteria at different operational stages of the BSIS with a sponge iron (SFe) dosage of 90 g/L. The results showed that as the operation time of the reactor extended, the relative abundance of denitrifying genera such as Saccharimonadales, Arenimonas, and Acinetobacter significantly increased, while the relative abundance of Proteobacteria showed a trend of initial increase followed by a decrease. The relative abundance of nitrifying bacteria exhibited a more complex variation, whereas the abundance of denitrifying bacteria showed a continuous upward trend. In addition, there were complex interrelationships among different denitrifying bacteria, such as a positive correlation between Saccharimonadales and Acetobacteraceae, and a negative correlation between Rhodothermus and Pseudoxanthomonas. This study not only revealed the changes in the relative abundance and interrelationships of microbial communities and nitrogen cycle-related functional bacteria over time with an SFe dosage of 90 g/L, but also provided a new perspective for understanding the intrinsic mechanism of enhanced biological denitrification by sponge iron. These findings are of great significance for optimizing the operating parameters of the BSIS, improving denitrification efficiency, and promoting the practical application of this technology in the field of environmental engineering. Full article

The rapid expansion of the global population has intensified the demand for protein-rich food sources, positioning aquaculture as a crucial sector in the endeavor to alleviate global hunger through the provision of high-quality aquatic protein. Traditional protein sources such as fishmeal have historically served as the foundation of aquafeeds; however, their elevated costs and limited availability have catalyzed the search for sustainable alternatives. These alternatives encompass plant-based proteins, insect meals, and, more recently, single-cell proteins (SCPs), which are derived from microorganisms including bacteria, yeast, fungi, and microalgae. Nonetheless, SCP remains in its nascent stages and currently accounts for only a minor fraction of aquafeed formulations relative to other established alternatives. The production of SCP utilizes low-cost substrates, such as agricultural and dairy wastes, thereby supporting waste mitigation and principles of the circular economy. This review elucidates the nutritional value of SCPs, their potential for biofortification, and their emerging roles as functional feeds with immunomodulatory and nutrigenomic effects. Additionally, the review underscores the potential of endophytes as a novel SCP source, highlighting their underutilized capacity to foster sustainable innovations in aquafeeds. Full article

Traditional hazard identification techniques for Vibrio parahaemolyticus often neglect the distinction between viable and nonviable bacteria in aquatic products, leading to overestimated disease risks and uncertainties in risk assessments. To address this limitation, we developed an automated PMA pretreatment instrument that integrates dark incubation and photo-crosslinking into a unified workflow, allowing customizable parameters such as incubation time, light exposure duration, and mixing speed while maintaining stable temperatures (<±1 °C fluctuation) to preserve bacterial DNA integrity. Leveraging this system, a duplex qPCR assay was optimized for simultaneous quantitative detection of V. parahaemolyticus and V. cholerae in aquatic products and environmental samples. The assay demonstrated robust performance with 90–110% amplification efficiencies across diverse matrices, achieving low limits of detection (LODs) of 10¹–10² CFU/mL in shrimp farming environment water and 10²–10³ CFU/g in shrimp (Litopenaeus vannamei) and oyster (Crassostrea gigas). Notably, it effectively discriminated viable bacteria from 10⁶ CFU/mL(g) nonviable cells and showed strong correlation with ISO-standard methods in real-world sample validation. This integrated platform offers a rapid, automated solution for accurate viable bacterial quantification, with significant implications for food safety, pathogen surveillance, and risk management in aquatic industries. Full article

The health benefits associated with microbial species inhabiting aquatic animals have garnered increasing attention, as it is expected that the colonization and efficacy of native probiotic bacteria adapted to the internal environment of the target species will be more active than non-native bacteria. In this study, six isolates were obtained from the intestinal tract of largemouth bass. Three of these isolates demonstrated higher growth ability compared to the others and were further characterized using in vitro assays. Lactococcus lactis LBM15 was found to exhibit antibacterial activity against common pathogens affecting largemouth bass; the adhesion inhibition capabilities of the isolates were systematically evaluated through competitive, repulsive, and substitutive adhesion assays. The strain inhibited adhesion to all six tested pathogen strains, with competitive adhesion inhibition rates ranging from 42% to 54%, the highest of which was observed against V. anguillarum. Repulsive adhesion inhibition rates ranged from 27% to 55%, with the highest rate noted for Edwardsiella tarda. Additionally, substitutive adhesion inhibition rates were found to range from 48% to 76%, with the highest inhibition observed against Aeromonas hydrophila. Furthermore, LBM15 exhibited favorable antimicrobial susceptibility profiles, showing sensitivity to 21 antibiotics tested. Notably, safety assessment trials were performed exposing fish to LBM15 at a concentration of 1 × 10⁹ CFU/mL by injection and at a concentration of 1 × 10⁸ CFU/mL by feed administration. No clinical abnormalities, behavioral alterations, or mortality were documented in either exposure group, confirming the safety of LBM15 for application in aquaculture. The results suggested that LBM15 isolates from largemouth bass have potential for further investigation and possible application as probiotic candidates. Full article

Tyre wear particles (TWPs), generated from tyre-road abrasion, are a pervasive and under-regulated environmental pollutant, accounting for a significant share of global microplastic contamination. Recent estimates indicate that 1.3 million metric tons of TWPs are released annually in Europe, dispersing via atmospheric transport, stormwater runoff, and sedimentation to contaminate air, water, and soil. TWPs are composed of synthetic rubber polymers, reinforcing fillers, and chemical additives, including heavy metals such as zinc (Zn) and copper (Cu) and organic compounds like polycyclic aromatic hydrocarbons (PAHs) and N-(1,3-dimethylbutyl)-N′-phenyl-p-phenylenediamine (6PPD). These constituents confer persistence and bioaccumulative potential. While TWP toxicity in aquatic systems is well-documented, its ecological impacts on terrestrial environments, particularly in agricultural soils, remain less understood despite global soil loading rates exceeding 6.1 million metric tons annually. This review synthesizes global research on TWP sources, environmental fate, and ecotoxicological effects, with a focus on soil–plant systems. TWPs have been shown to alter key soil properties, including a 25% reduction in porosity and a 20–35% decrease in organic matter decomposition, disrupt microbial communities (with a 40–60% reduction in nitrogen-fixing bacteria), and induce phytotoxicity through both physical blockage of roots and Zn-induced oxidative stress. Human exposure occurs through inhalation (estimated at 3200 particles per day in urban areas), ingestion, and dermal contact, with epidemiological evidence linking TWPs to increased risks of respiratory, cardiovascular, and developmental disorders. Emerging remediation strategies are critically evaluated across three tiers: (1) source reduction using advanced tyre materials (up to 40% wear reduction in laboratory tests); (2) environmental interception through bioengineered filtration systems (60–80% capture efficiency in pilot trials); and (3) contaminant degradation via novel bioremediation techniques (up to 85% removal in recent studies). Key research gaps remain, including the need for long-term field studies, standardized mitigation protocols, and integrated risk assessments. This review emphasizes the importance of interdisciplinary collaboration in addressing TWP pollution and offers guidance on sustainable solutions to protect ecosystems and public health through science-driven policy recommendations. Full article