Search Results (29)

Excessive sugar intake remains a major health challenge, motivating the development of safe and effective alternatives. Thaumatin, a natural high-intensity sweet protein, elicits sweetness through activation of the sweet taste receptor (T1R2/T1R3), yet its molecular recognition mechanism remains understudied. An integrated computational strategy combining comparative modeling, protein–protein docking, and 500 ns molecular dynamics simulations (triplicates) was employed to elucidate the thaumatin–receptor binding. Structural modeling identified the closed conformation of the Venus flytrap domain (VFT) as optimal for ligand engagement. Modeling revealed a stable binding interface characterized by electrostatic complementarity and van der Waals interactions, characterized by interfacial contacts of receptors and hydrogen bonding networks. Residue-level energy decomposition highlighted key residues (W418 and E422 of T1R2; S59 of T1R3) and thaumatin residues (K67, R82, and K137) that contribute substantially to complex stabilization, consistent with experimentally reported sweetness determinants. These findings provide molecular-level insight into sweet protein recognition and establish a structural framework for rational engineering of protein-based sweeteners with enhanced potency and selectivity. Full article

Understanding and developing habits in complex systems thinking using STEM-integrated perspectives is essential in addressing education and workforce needs in society. In this study, we investigated a learning intervention that incorporated multiple models designed to improve engineering students’ understanding of complex systems through investigating the mechanobiology of the Venus flytrap. Mechanobiology is a transdisciplinary field that integrates biology, engineering, chemistry, and physics to explore how cells and tissues sense and respond to forces in their environment. We used an exploratory, mixed-methods approach to examine the impact of this new curriculum on investigating flytrap closure and prey digestion. We then evaluated students’ understanding of complex systems characteristics (i.e., many interacting parts, decentralization, non-linear interactions, emergence, and adaptation) and in their ability to transfer these principles to other systems. Qualitative analyses demonstrate that students articulated key systems principles in relation to their understanding of flytrap mechanobiology, while descriptive summaries of pre- and post-surveys suggest broader conceptual gains. Furthermore, students demonstrated the transfer of systems thinking to other contexts and reported an enhanced understanding of real-world STEM research. Full article

Umami taste in lager beer not only determined body fullness and the backbone of aftertaste, but also affected the controllability and interpretability of flavor expression across the entire brewing process. Based on stage-wise sampling, peptidomic profiles were established on wort fermentation day 0, day 1, day 3, and day 9. A total of 25,592 peptides were identified by reversed-phase liquid chromatography–quadrupole time-of-flight mass spectrometry (RPLC-QTOF-MS). Molecular informatics screening was performed using UMPred-FRL (a feature representation learning-based meta-predictor for umami peptides) and TastePeptides-Meta (a one-stop platform for taste peptides and prediction models), yielding 7255 potential umami peptides. From these, 145 peptides were further selected for molecular docking. In addition, 6 representative umami peptides were selected for receptor-level validation and structural analysis. Mechanistically, the umami receptor taste receptor type 1 member 1/taste receptor type 1 member 3 (T1R1/T1R3) belonged to class C G protein-coupled receptor (GPCR) and relied on the extracellular Venus flytrap (VFT) domain for ligand capture. Ligand-induced VFT conformational convergence transmitted changes to the transmembrane region and triggered signal transduction. Docking and energy decomposition indicated that the ionic group primarily contributed to orientation and anchoring. Salt-bridge or hydrogen-bond networks were formed around Lys228, Arg240, Glu206, Asp210, Asn141, and Gln138, thereby reducing conformational freedom. Meanwhile, hydrophobic side chains obtained major binding gains within a hydrophobic microenvironment formed by Val135, Ile137, Leu165, Tyr166, Trp78, and His79. These results reflected a synergistic mode in which charge pairing enabled positioning and hydro-phobic complementarity promoted VFT closure. To experimentally confirm sensory relevance, 6 representative peptides were individually spiked into 4 brewing-stage beer samples, which produced a clear stratification pattern across stages. Notably, peptides with favorable docking-derived binding propensity did not necessarily enhance umami perception, and several longer peptides showed persistent negative sensory shifts, supporting that binding affinity alone could not be treated as a proxy for perceived umami in the beer matrix. At the node level, the cumulative abundance of umami peptides showed a significant positive correlation with umami scores, with a Pearson correlation coefficient of r = 0.963 and p = 0.037. This result indicated good linear consistency between umami peptide content and the upward shift in umami taste in lager beer. Umami peptide clusters were further proposed as a more appropriate functional unit, and an umami peptide cluster database spanning the full process was constructed. This database provided a reusable resource for process control and flavor prediction. Full article

The digestive gland of Venus flytrap consists of various types of specialized cells. Secretory cells form two layers: the first is a more external outer layer and the second is an internal layer that is connected to stalk cells. Our goal was to check whether the position/location of cells is essential in terms of cell wall composition (whether cell wall microdomains exist). We also focused on the structure of cell wall ingrowths in secretory cells. To achieve this, the localization of the cell wall components in the cell walls of gland cells was performed using the immunolabeling technique and confocal microscopy. It has been found that cells within the gland head are not equal. Their location determines the composition of their cell walls in terms of the presence of various epitopes. The cell walls of the secretory cells in the outer layer were deficient in epitopes recognized by antibodies, including JIM5 (low methylesterified homogalacturonans), CCRC-M38 (low methylesterified homogalacturonans), LM5 (galactan), and CCRC-M48 (xyloglucan), which contrasted with the cell walls of the cells in the inner layer. In terms of the occurrence of pectic homogalacturonans, cell wall ingrowths constitute cell wall microdomains. The digestive glands of Dionaea muscipula exhibit pronounced cell wall microdomain organization, with distinct distributions of pectins, hemicelluloses, and arabinogalactan proteins across different glandular layers. These compositional differences reflect functional specialization in secretion, absorption, and structural support. Full article

Umami peptides were screened and identified from yak bone collagen for the first time by in silico analysis, molecular docking, and electronic tongue. Twenty proteases with known cleavage sites were used for the simulated proteolysis, and results indicated that “pepsin + papain” was the optimal enzymatic strategy for yak bone collagen to generate peptides with potential umami taste. Moreover, 82 novel unreported peptides with umami taste were found from the simulated hydrolysate, among which 9 peptides exhibited high binding affinity with the T1R1/T1R3 receptor (both -CDOCKER energy and CDOCKER interaction energy > 40 kcal/mol) via molecular docking. Subsequently, six novel umami peptides were identified through sensory evaluation and electronic tongue analysis, including VY, VM, SL, SN, VN, and IS (umami sensory score > 5). These peptides were also in silico characterized with high hydrophobicity, good water solubility, non-toxicity, non-allergenicity, good intestinal absorption, and good oral bioavailability. Furthermore, the identified peptides could bind with the key residues (such as HIS281 and LEU304) within the Venus flytrap domain of the T1R3 subunit of receptor T1R1/T1R3 through hydrogen bonds and electrostatic attractions to generate umami perception. This study revealed the mechanism of umami peptides identified from yak bone collagen and provides a novel approach for the development of umami peptides from animal sources. Full article

Carnivorous plants survive in harsh habitats with limited nutrients and a low pH. Much focus has been placed on carnivorous trap evolution as the primary mechanism to increase nutrient acquisition through insect digestion. Soil microbiome, however, may also play a pertinent role in nutrient acquisition influencing plant vigor and overall success. Dionaea muscipula, commonly known as the Venus’ flytrap, is endemic to rims of the Carolina Bays located in southeast North Carolina and northeast South Carolina, where D. muscipula survives in nutrient poor soils with a vestigial root system. We utilized a combination of microscopy, plating, and metagenomics, to investigate the presence/absence of fungal partners that may contribute to success and vigor of D. muscipula in its native habitat in order to further conservation of this carnivorous plant. Results support that D. muscipula forms both mycorrhizal and fungal endophytic associations, most likely to aid nutrient uptake from otherwise nutrient-poor soils, as well as aid in stress defense. Several ectomycorrhizal, endophytic, and saprophytic fungal species were identified from the surrounding rhizosphere of D. muscipula roots presenting a first glimpse into fungal communities that may influence D. muscipula physiology and compose the microbiome of the Carolina Bays ecosystem. Full article

Centralized daylight control has been extensively studied for its ability to optimize useful daylight while mitigating glare in targeted areas. However, this approach lacks a comprehensive visual comfort framework, as it does not simultaneously address spatial glare distribution, uniform high useful daylight levels across all sensor points, and overheating prevention through regulated annual solar exposure. Nevertheless, decentralized control facilitates autonomous operation of the individual façade components, addressing all the objectives. This study integrates a biomimetic functional approach with building performance simulations by computational design to evaluate different kinetic façade configurations. Through the implementation of parametric modeling and daylight analysis, we have identified an optimal angular configuration (60° for the focal region, 50° for the non-focal region) that significantly increases building performance. The optimized design demonstrates substantial improvements, reducing excessive sunlight exposure by 45–55% and glare incidence by 65–72% compared to other dynamic solutions. The recommended steeper angles achieve superior performance, maintaining high useful daylight illuminance (UDI > 91.5%) while dramatically improving visual comfort. Sensitivity analysis indicates that even minor angular adjustments (5–10°) can induce a 10–15% variation in glare performance, emphasizing the necessity of precise control mechanisms in both focal and non-focal regions of the façade. These findings establish a framework for creating responsive building façades that balance daylight provision with occupant comfort in real-time operation. Full article

The Venus flytrap, which possesses a number of mechano-sensitive trigger hairs, is a typical carnivorous plant that effectively senses and catches insects to survive in nutrient-poor habitats. When insects touch the trigger hairs on a leaf, once they reach the threshold, the Venus flytrap induces an action potential and sharply closes to capture the prey. In this paper, the trigger hairs obtain a special cantilever beam structure with a stiff hair lever and a flexible basal podium, and there is a noticeable notched structure at the basal podium, which differs from a common homogeneous hair. Based on the characteristics of the Venus flytrap trigger hairs, we established a three-dimensional model and conducted theoretical and finite element analysis. The results show that the unique hollow heterogeneous cantilever structure of the Venus flytrap trigger hair can achieve high sensitivity and optimal tactile perception. Overall, the morphology, structure and mechanical characteristics of Venus flytrap trigger hairs were characterized in detail, which may provide a deeper understanding of the trigger hairs’ tactile perception mechanism. And the mechanical simulation and optimization analysis of Venus flytrap trigger hairs had an important theoretical basis and parameter support for the further design of state-of-the-art tactile sensors with high sensitivity inspired by Venus flytrap trigger hairs. Full article

Plants are ideal for soft robot design due to their favourable ability to adapt and respond to the environment. Here, three different motile plants, bird of paradise (Strelitzia reginae), the waterwheel plant (Aldrovanda vesiculosa), and the Venus flytrap (Dionaea muscipula), are introduced. They may deform following the physics predetermined by the structure. As a decentralised species, plants respond under environmental stimulation without a controlling unit like a brain and motor-like muscles. The mechanism behind the movement of the plant should enlighten more intelligent robotics. In this study, movable plants are compared for their actuating principle, and, based on their deformation model, three pneumatic actuators are designed. The bird of paradise opens its petals when the sunbirds sit on another petal, which inspires the structure utilising the bending of the midrib to open lobes. Similarly, the waterwheel plant stores energy in the bending midrib and releases it when it closes. But, the Venus flytrap takes advantage of snapping to achieve rapid closure. Using three-dimensional (3D) printing, pneumatic actuators, which are ruled by the mechanism of plants with silicon rubber surfaces, are fabricated and tested. Under air pressure, the actuator deforms, mimicking the plant cells expanding under the turgor pressure. The hingeless actuator performs well while interacting with dedicated projects. Full article

Biomimetic structures are inspired by elegant and complex architectures of natural creatures, drawing inspiration from biological structures to achieve specific functions or improve specific strength and modulus to reduce weight. In particular, the rapid closure of a Venus flytrap leaf is one of the fastest motions in plants, its biomechanics does not rely on muscle tissues to produce rapid shape-changing, which is significant for engineering applications. Composites are ubiquitous in nature and are used for biomimetic design due to their superior overall performance and programmability. Here, we focus on reviewing the most recent progress on biomimetic Venus flytrap structures based on smart composite technology. An overview of the biomechanics of Venus flytrap is first introduced, in order to reveal the underlying mechanisms. The smart composite technology was then discussed by covering mainly the principles and driving mechanics of various types of bistable composite structures, followed by research progress on the smart composite-based biomimetic flytrap structures, with a focus on the bionic strategies in terms of sensing, responding and actuation, as well as the rapid snap-trapping, aiming to enrich the diversities and reveal the fundamentals in order to further advance the multidisciplinary science and technological development into composite bionics. Full article

With the continuous integration of material science and bionic technology, as well as increasing requirements for the operation of robots in complex environments, researchers continue to develop bionic intelligent microrobots, the development of which will cause a great revolution in daily life and productivity. In this study, we propose a bionic flower based on the PNIPAM–PEGDA bilayer structure. PNIPAM is temperature-responsive and solvent-responsive, thus acting as an active layer, while PEGDA does not change significantly in response to a change in temperature and solvent, thus acting as a rigid layer. The bilayer flower is closed in cold water and gradually opens under laser illumination. In addition, the flower gradually opens after injecting ethanol into the water. When the volume of ethanol exceeds the volume of water, the flower opens completely. In addition, we propose a bionic Venus flytrap soft microrobot with a bilayer structure. The robot is temperature-responsive and can reversibly transform from a 2D sheet to a 3D tubular structure. It is normally in a closed state in both cold (T < 32 °C) and hot water (T > 32 °C), and can be used to load and transport objects to the target position (magnetic field strength < 1 T). Full article

The rapid closure of the Venus flytrap (Dionaea muscipula) can be completed within 0.1–0.5 s due to the bistability of hyperbolic leaves and the curvature change of midrib. Inspired by its bistable behavior, this paper presents a novel bioinspired pneumatic artificial Venus flytrap (AVFT), which can achieve a larger capture range and faster closure action at low working pressure and low energy consumption. Soft fiber-reinforced bending actuators are inflated to move artificial leaves and artificial midrib fabricated from bistable antisymmetric laminated carbon fiber-reinforced prepreg (CFRP) structures, and then the AVFT is rapidly closed. A two-parameter theoretical model is used to prove the bistability of the selected antisymmetric laminated CFRP structure, and analyze the factors affecting the curvature in the second stable state. Two physical quantities, critical trigger force and tip force, are introduced to associate the artificial leaf/midrib with the soft actuator. A dimension optimization framework for soft actuators is developed to reduce their working pressures. The results show that the closure range of the AVFT is extended to 180°, and the snap time is shortened to 52 ms by introducing the artificial midrib. The potential application of the AVFT for grasping objects is also shown. This research can provide a new paradigm for the study of biomimetic structures. Full article

The digestive organs of carnivorous plants have external (abaxial) glands and trichomes, which perform various functions. Dionaea muscipula Ellis (the Venus flytrap) is a model carnivorous plant species whose traps are covered by external trichomes. The aim of the study was to fill in the gap regarding the structure of the stellate outer trichomes and their immunocytochemistry and to determine whether these data support the suggestions of other authors about the roles of these trichomes. Light and electron microscopy was used to show the trichomes’ structure. Fluorescence microscopy was used to locate the carbohydrate epitopes that are associated with the major cell wall polysaccharides and glycoproteins. The endodermal cells and internal head cells of the trichomes were differentiated as transfer cells, and this supports the idea that stellate trichomes transport solutes and are not only tomentose-like trichomes. Trichome cells differ in the composition of their cell walls, e.g., the cell walls of the internal head cells are enriched with arabinogalactan proteins (AGPs). The cell walls of the outer head cells are poor in both low and highly homogalacturonans (HGs), but the immature trichomes are rich in the pectic polysaccharide (1–4)–β-D-galactan. In the immature traps, young stellate trichomes produce mucilage which may protect the trap surface, and in particular, the trap entrance. However, the role of these trichomes is different when the outer head cells collapse. In the internal head cells, a thick secondary wall cell was deposited, which together with the thick cell walls of the outer head cells played the role of a large apoplastic space. This may suggest that mature stellate trichomes might function as hydathodes, but this should be experimentally proven. Full article

The objective of this study was to investigate the response of the photosynthetic apparatus of the Venus flytrap (Dionaea muscipula J. Ellis) to UV-A radiation stress as well as the role of selected secondary metabolites in this process. Plants were subjected to 24 h UV-A treatment. Subsequently, chl a fluorescence and gas exchange were measured in living plants. On the collected material, analyses of the photosynthetic pigments and photosynthetic apparatus proteins content, as well as the contents and activity of selected antioxidants, were performed. Measurements and analyses were carried out immediately after the stress treatment (UV plants) and another 24 h after the termination of UV-A exposure (recovery plants). UV plants showed no changes in the structure and function of their photosynthetic apparatus and increased contents and activities of some antioxidants, which led to efficient CO₂ carboxylation, while, in recovery plants, a disruption of electron flow was observed, resulting in lower photosynthesis efficiency. Our results revealed that D. muscipula plants underwent two phases of adjustment to UV-A radiation. The first was a regulatory phase related to the exploitation of available mechanisms to prevent the over-reduction of PSII RC. In addition, UV plants increased the accumulation of plumbagin as a potential component of a protective mechanism against the disruption of redox homeostasis. The second was an acclimatization phase initiated after the running down of the regulatory process and decrease in photosynthesis efficiency. Full article

The human sweet taste receptor is a heterodimeric receptor composed of two distinct G-protein-coupled receptors (GPCRs), TAS1R2 and TAS1R3. The TAS1R2 and TAS1R3 subunits are members of a small family of class C GPCRs whose members share the same architecture, comprising a Venus Flytrap (VFT) module linked to the seven transmembrane domains (TMDs) by a short cysteine-rich region (CRR). The VFT module of TAS1R2 contains the primary binding site for most of the sweet-tasting compounds, including natural sugars and artificial and natural sweeteners. However, cellular assays, molecular docking and site-directed mutagenesis studies have revealed that the VFT, CRR and TMD of TAS1R3 interact with some sweeteners, including the sweet-tasting protein brazzein. The aim of this study was to better understand the contribution of TAS1R2-VFT in the binding of sweet stimuli. To achieve this, we heterologously expressed human TAS1R2-VFT (hTAS1R2-VFT) in Escherichia coli. Circular dichroism spectroscopic studies revealed that hTAS1R2-VFT was properly folded with evidence of secondary structures. Using size-exclusion chromatography coupled with light scattering, we found that hTAS1R2-VFT behaves as a monomer. Ligand binding quantified by intrinsic tryptophan fluorescence showed that hTAS1R2-VFT is capable of binding sweet stimuli with K_d values, in agreement with physiological detection. Furthermore, we investigated whether the impact of point mutations, already shown to have deleterious effects on cellular assays, could impact the ability of hTAS1R2-VFT to bind sweet ligands. As expected, the ligand affinities of hTAS1R2-VFT were drastically reduced through the introduction of single amino acid substitutions (D278A and E382A) known to abolish the response of the full-length TAS1R2/TAS1R3 receptor. This study demonstrates the feasibility of producing milligram quantities of hTAS1R2-VFT to further characterize the mechanism of binding interaction and perform structural studies. Full article