Search Results (779)

Background/Objectives: Circulating cell-free DNA (cfDNA) consists of genomic DNA (cf-nDNA) and mitochondrial DNA (cf-mtDNA) fragments released from cells primarily through apoptosis and necrosis. In healthy individuals, the main source of cfDNA is apoptosis, whereas in cancer patients, necrosis predominates. Considering that in vitro cfDNA models are valuable research tools, this study presents an in vitro characterization of cf-mtDNA patterns released into the culture medium by four human cell lines: normal dermal fibroblasts (Hs27), induced pluripotent stem cells (iPSCs), melanoma cells (BMel), and prostate cancer cells (PC3). Furthermore, as fetal bovine serum (FBS)—a widely used supplement in cell culture media—has been shown to contain bovine cfDNA, species-specific primers were employed to eliminate potential artifacts arising from this contamination in in vitro experiments. Methods: Fragmentation analysis of cf-mtDNA was conducted by amplifying the human MT-CYB gene and the D-loop region in four cell lines using species-specific primers. Two indices, Q and λ, were employed to quantify fragmentation. Results: These indices reveal that cancer cells exhibit the highest degree of fragmentation compared to fibroblasts, whereas stem cells show the lowest degree of fragmentation. This study identified species-specific primers for the human and bovine MT-CYB gene, confirming the presence of bovine cf-mtDNA in cell culture media supplemented with FBS. Conclusions: in vitro cellular models are useful for studying the mechanisms of cfDNA release and fragmentation; designed primers provide a reliable tool for assessing contamination across different growth time points minimizing interference errors and non-specific amplifications. Full article

Tissue engineering has the potential to overcome the limitations of using autografts in nerve gap repair, using cellular biomaterials to bridge the gap and support neuronal regeneration. Various types of therapeutic cells could be considered for use in aligned collagen-based engineered neural tissue (EngNT), including Schwann cells and their precursors, which can be derived from human induced pluripotent stem cells (hiPSCs). Using Schwann cell precursors may have practical advantages over mature Schwann cells as they expand readily in vitro and involve a shorter differentiation period. However, the performance of each cell type needs to be tested in EngNT. By adapting established protocols, hiPSCs were differentiated into Schwann cell precursors and Schwann cells, with distinctive molecular profiles confirmed using immunocytochemistry and RT-qPCR. For the first time, both cell types were incorporated into EngNT using gel aspiration–ejection, a technique used to align and simultaneously stabilise the cellular hydrogels. Both types of cellular constructs supported and guided aligned neurite outgrowth from adult rat dorsal root ganglion neurons in vitro. Initial experiments in a rat model of nerve gap injury demonstrated the extent to which the engrafted cells survived after 2 weeks and indicated that both types of hiPSC-derived cells supported the infiltration of host neurons, Schwann cells and endothelial cells. In summary, we show that human Schwann cell precursors promote infiltrating endogenous axons in a model of peripheral nerve injury to a greater degree than their terminally differentiated Schwann cell counterparts. Full article

Lotus stems contain cellulose, which can be utilized as a base material for producing green products, specifically degradable plastics. This research investigates the effect of polylactic acid (PLA) blends on cellulose degradable plastics from the lotus stem (Nelumbo nucifera). The mechanical characteristics are as follows: tensile strength of 0.7703–3.3212 MPa, elongation of 0.58–1.16%, Young’s modulus of 78.7894–364.6118 MPa. Compound analysis showed the presence of O-H, C-C, and C=O groups, and the presence of microbial activity in the soil can also lead to the degradation of these groups due to their hydrophilic nature, which allows them to bind water. Thermal analysis within a temperature range of 413.24 °C to 519.80 °C, shows that significant weight loss begins with the formation of crystalline structures. The degradable plastic exhibiting the lowest degree of swelling consists of 1 g of cellulose and 8 g of PLA, resulting in a swelling value of 6.25%. The degradable plastic is anticipated to decompose most rapidly after 52 days, utilizing 2 g of PLA and 7 g of cellulose. This complies with standard requirement, which sets a maximum degradation period of 180 days for polymers. Full article

The cumulative impact of decades of oil and gas exploration has left Alberta’s boreal forests densely fragmented by seismic lines, which are expected to naturally regenerate; however, recovery is often highly variable and generally poor in peatlands due to increased wetness and reduced microtopography. In this study, we evaluated seismic lines in lowland ecosites with some degree of successful natural regeneration to gain a better understanding of the natural recovery process in these areas. We compared stand characteristics between the seismic line (23 to 48 years post-disturbance) and the adjacent undisturbed forest. We found that soil properties were similar, but seedling (height < 1.3 m) density was significantly higher on the seismic line, with 252% more tamarack and 65% more black spruce than in the adjacent forest. Relative to the adjacent forest, there were significantly fewer trees (height > 1.3 m) on the seismic line, with an 84% and 50% reduction in black spruce and tamarack, respectively. By analyzing tree ring data from seismic lines, we found that the length of time before tree establishment was 10 years for black spruce and 8 years for tamarack. On average, it took 12 years for tree density to reach 2000 stems per hectare (sph). We modeled growth rates for black spruce and tamarack and found that they were growing faster than their adjacent forest counterparts, reaching 3 m after an average of 38 and 33 years, respectively. Stands on seismic lines were projected to a final stand age of 61 years using the Mixedwood Growth Model (MGM) to evaluate future stand characteristics. Full article

As a strategic crop of dry farming in northern China, the photosynthetic characteristics and stress resistance of foxtail millet (Setaria italica L.) are crucial to yield formation. This study aimed to explore the physiological characteristics of various foxtail millet varieties and screen high-efficiency varieties adapted to semi-arid climates. In the agro-pastoral ecotone of northern Shanxi Province, the physiological and ecological parameters, etc. of six cultivars were measured. The results showed that different cultivars had bimodal diurnal photosynthetic curves with distinct peak values and midday depression degrees, reflecting varied responses to high midday temperature and light stress. Dabaigu and Jingu 21 performed superiorly, with mean daily net photosynthetic rates (Pn) of 22.99 and 20.72 µmol·m⁻²·s⁻¹, significantly higher than Jinmiao K1 (12.87 µmol·m⁻²·s⁻¹). Chlorophyll fluorescence analysis showed Dabaigu had higher potential activity (F_v/F₀) of 3.98 than Jinmiao K1 (2.40). Jingu 21 synergistically optimized plant height, stem diameter, and biomass accumulation. Dabaigu and Jingu 21 are elite cultivars for the agro-pastoral ecotone of northern Shanxi Province due to high photosynthetic efficiency, strong photoprotection, and morphological plasticity. Full article

The ongoing global climate change has led to an increase in the frequency and complexity of drought events. Pinus yunnanensis, a native tree species in southwest China that possesses significant ecological and economic value, exhibits a high sensitivity to drought stress, particularly in its seedlings. This study investigates the response mechanisms of non-structural carbohydrates (NSCs, defined as the sum of soluble sugars and starch) and the stoichiometric characteristics of carbon (C), nitrogen (N), and phosphorus (P) to repeated drought conditions in Pinus yunnanensis seedlings. We established three treatment groups in a potting water control experiment involving 2-year-old Pinus yunnanensis seedlings: normal water supply (CK), a single drought (D1), and three drought–rewatering cycles (D3). The findings indicated that the frequency of drought occurrences, organ responses, and their interactions significantly influenced the non-structural carbohydrate (NSC) content and its fractions, as well as the C/N/P content and its stoichiometric ratios. Under D3 treatment, stem NSC content increased by 24.97% and 29.08% compared to CK and D1 groups (p < 0.05), respectively, while root NSC content increased by 41.35% and 49.46% versus CK and D1 (p < 0.05). The pronounced accumulation of soluble sugars and starch in stems and roots under D3 suggests a potential stress memory effect. Additionally, NSC content in the stems increased significantly by 77.88%, while the roots enhanced their resource acquisition by dynamically regulating the C/P ratio, which increased by 23.26% (p < 0.05). Needle leaf C content decreased (18.77%) but P uptake increased (8%) to maintain basal metabolism (p < 0.05). Seedling growth was N-limited (needle N/P < 14) and the degree of N limitation was exacerbated by repeated droughts. Phenotypic plasticity indices and principal component analysis revealed that needle nitrogen and phosphorus, soluble sugars in needles, stem C/N ratio (0.61), root C/N ratio (0.53), and stem C/P ratio were crucial for drought adaptation. This study elucidates the physiological mechanisms underlying the resilience of Pinus yunnanensis seedlings to recurrent droughts, as evidenced by their organ-specific strategies for allocating carbon, nitrogen, and phosphorus, alongside the dynamic regulation of nitrogen storage compounds (NSCs). These findings provide a robust theoretical foundation for implementing drought-resistant afforestation and ecological restoration initiatives targeting Pinus yunnanensis in southwestern China. Full article

Stem radius growth (GRO), tree water deficit (TWD), and maximum daily shrinkage (MDS) were monitored throughout 2023 in a semi-arid Mediterranean forest stand in Burdur, Türkiye, where Pinus nigra subsp. pallasiana (Lamb.) Holmboe and Pinus brutia Ten. naturally co-occur. These indicators, derived from electronic band dendrometers, were analyzed in relation to key climatic variables. Results indicated that P. brutia had a longer growth period, while P. nigra exhibited a higher average daily increment under the environmental conditions of 2023 at the study site. Annual stem growth was nearly equal for both species. Based on dendrometer observations, P. brutia exhibited lower normalized TWD and higher normalized MDS values under varying vapor pressure deficit (VPD) and soil water potential (SWP) conditions. A linear mixed-effects model further confirmed that P. brutia consistently maintained lower TWD than P. nigra across a wide climatic range, suggesting a comparatively lower degree of drought-induced water stress. GRO was most influenced by air temperature and VPD, and negatively by SWP. TWD was strongly affected by both VPD and SWP, while MDS was primarily linked to minimum air temperature and VPD. Moreover, MDS in P. brutia appeared more sensitive to climate variability compared to P. nigra. Although drought limited stem growth in both species during the study year, the lower TWD and higher MDS observed in P. brutia may indicate distinct physiological strategies for coping with drought. These findings offer preliminary insights into interspecific differences in water regulation under the particular climatic conditions observed during the study year in this semi-arid Mediterranean ecosystem. Full article

The sustainable development of higher education exhibits a strong and measurable association with the level of regional innovation capacity. Drawing on panel data covering 31 provincial-level administrative regions in China from 2010 to 2022, we construct evaluation frameworks for both higher education and regional innovation capacity using the entropy weight method. These are complemented by kernel density estimation, spatial autocorrelation analysis, Dagum Gini coefficient decomposition, and the Obstacle Degree Model. Together, these tools enable a comprehensive investigation into the spatiotemporal evolution and driving mechanisms of coupling coordination dynamics between the two systems. The results indicate the following: (1) Both higher education and regional innovation capacity indices exhibit steady growth, accompanied by a clear temporal gradient differentiation. (2) The coupling coordination degree shows an overall upward trend, with significant inter-regional disparities, notably “higher in the east and low in the west”. (3) The spatial distribution of the coupling coordination degree reveals positive spatial autocorrelation, with provinces exhibiting similar levels tending to form spatial clusters, most commonly of the low–low or high–high type. (4) The spatial heterogeneity is pronounced, with inter-regional differences driving overall imbalance. (5) Key obstacles hindering regional innovation include inadequate R&D investment, limited trade openness, and weak technological development. In higher education sectors, limitations stem from insufficient social service benefits and efficiency of flow. This study recommends promoting the synchronized advancement of higher education and regional innovation through region-specific development strategies, strengthening institutional infrastructure, and accurately identifying and addressing key barriers. These efforts are essential to fostering high-quality, coordinated regional development. Full article

To explore the feasibility of integrated deficit water-biogas slurry irrigation under indirect subsurface drip irrigation, three deficit irrigation levels (60%FC, 70%FC, and 80%FC; FC represents field capacity) were established during the three growth stages of tomatoes. The results indicated that biogas slurry irrigation treatments increased the soil organic matter content in the root zone and water use efficiency (WUE) and reduced soil pH. As the degree of deficit increased, the plant height and stem diameter of tomatoes decreased significantly (p < 0.05), particularly during the seedling and flowering-fruiting stages. A mild deficit during the seedling stage was beneficial for subsequent plant growth, yielding maximum leaf area (6871.42 cm² plant⁻¹). Moderate deficit treatment at the seedling stage maximized yield, which was 19.79% higher than the control treatment in 2020 and 19.22% higher in 2021. The WUE of severe deficit treatment at the maturity stage increased by 26.6% (2020) and 31.04% (2021) compared to the control treatment. Comprehensive evaluation using TOPSIS combined with the weighted method revealed that severe deficit treatment at the maturity stage provided the best comprehensive benefits for tomatoes. In summary, deficit irrigation at different growth stages positively influenced tomato growth, quality, and soil environment in response to water-biogas slurry irrigation. Full article

Background: It is estimated that in Italy, there were 364,000 new diagnoses of neoplasms each year and that the overall incidence of blood cancers was 10% of these. Leukemia and lymphomas represented the ninth and eighth places, respectively, among the causes of death from neoplasia. Hematopoietic stem cell transplantation represented an effective treatment option for many of these malignancies, and not only that: benign and congenital diseases could also be treated. Objective: To assess knowledge among the Apulian population regarding stem cell donation and factors that could influence this choice, focusing especially on the knowledge of the residents of Puglia, Italy on how stem cells were harvested and their functions, their reasons for joining the National Registry, and the reasons that hold them back from making such a choice. Study Design: An observational and cross-sectional study was conducted, through snowball sampling methodology, until data saturation. An online survey was conducted, which included several Italian associations. The questionnaire administered contained five main sections, such as sociodemographic data, knowledge of the existence of National Registries and their adherence, the nationwide presence of various associations that promote donation, knowledge with respect to the structure, use and functions of stem cells, sources of procurement, such as bone marrow, peripheral blood and umbilical cord, and related procedures, beliefs, attitudes, values, and opinions of the Italian population regarding the topic, and degree of information and education regarding bone marrow donation. Results: A total of 567 Apulian citizens were enrolled. Of these, 75.3% were female and 96.8% were aged between 18 and 65 years. Most of participants were single (46.9%) and married (47.3%) and had a diploma (44.4%), and less had a degree (35.8%). Significant differences were recorded between gender, singles, and married participants, and participants with a diploma or a degree and the items proposed. Conclusions: A true culture of donation in our region was not clearly spread. Although something has been accomplished in recent years in terms of deceased donor donation, still a great deal needs to be achieved for living donation, which encountered a great deal of resistance. It has been deemed necessary to seek winning solutions to this issue in terms of communication and information campaigns, raising awareness and empowering citizens to express consciously their concerns about organs and tissues and to stand in solidarity with those who suffered. Full article

As a plant-specific peroxidase family, class III peroxidase (PRX) plays an important role in plant growth, development, and stress response. In this study, a preliminary functional analysis of CqPRX9L1 was conducted. Bioinformatics analysis revealed that CqPRX9L1 encodes a 349-amino acid protein belonging to the plant-peroxidase-like superfamily, featuring a transmembrane domain and cytoplasmic localization. The promoter region of CqPRX9L1 harbors various cis-acting elements associated with stress responses, hormone signaling, light regulation, and meristem-specific expression. The tissue-specific expression pattern of the CqPRX9L1 gene and its characteristics in response to different stresses were explored using subcellular localization, quantitative real-time PCR (qRT-PCR), and heterologous transformation into Arabidopsis thaliana. The results showed that CqPRX9L1, with a transmembrane structure, was localized in the cytoplasm, which encodes 349 amino acids and belongs to the plant-peroxisome-like superfamily. The promoter region contains stress-response elements, hormone-response elements, light-response elements, and meristem expression-related elements. The expression of CqPRX9L1 was relatively higher in ears and roots at the panicle stage than in stems and leaves. CqPRX9L1 showed a dynamic expression pattern of first decreasing and then increasing under abiotic stresses such as 15% PEG 6000, low temperature, and salt damage, with differences in response time and degree. CqPRX9L1 plays an important role in response to abiotic stress by affecting the activity of antioxidant enzymes such as superoxide dismutase (SOD) and peroxidase (POD), as well as the synthesis and decomposition of proline (Pro). CqPRX9L1 also affects plant bolting and flowering by regulating key flowering genes (such as FT and AP1) and gibberellin (GA)-related pathways. The results establish a foundation for revealing the functions and molecular mechanisms of the CqPRX9L1 gene. Full article

This study explores the metabolite diversity and potential medicinal value of three Paphiopedilum species—P. dianthum, P. micranthum, and P. barbigerum—using widely targeted metabolomics via HPLC-MS/MS in conjunction with in vitro antioxidant assays. A total of 2201 metabolites were detected across the three species, with flavonoids emerging as the dominant class (480 compounds, accounting for 21.8% of total metabolites). Comparative metabolomic analysis showed that flavonoid levels varied most prominently among the species. Notably, the metabolic profile of P. barbigerum (PB) diverged substantially from those of P. dianthum (PD) and P. micranthum (PM), which shared a higher degree of similarity with each other. Quantitative evaluation of antioxidant-associated metabolites revealed that PB exhibited the greatest enrichment in compounds with antioxidant potential, particularly flavonoids and phenolic acids, followed by PM and PD. These results were corroborated by antioxidant assays, in which PB demonstrated the highest free radical scavenging activity, with PM and PD displaying progressively lower effects. Differences in flavonoid content likely underpin these variations in antioxidant capacity. KEGG pathway enrichment analysis indicated that differentially expressed metabolites were primarily involved in flavonoid-associated biosynthetic routes, notably flavonoid biosynthesis (ko00941) and isoflavonoid biosynthesis (ko00943), with ko00941 being the most enriched. Within this pathway, PB showed eight significantly upregulated flavonoid metabolites, while PM and PD had seven and five, respectively. The observed differences may stem from species-specific expression of key biosynthetic enzymes such as flavonoid 3′-hydroxylase (F3′H) in PM and flavonoid 3′,5′-hydroxylase (F3′5′H) in PB, which influence both flavonoid composition and antioxidant potential. Full article

As global urbanization accelerates amidst compounding risks, comprehensive urban resilience assessment has emerged as a pivotal issue in optimizing risk governance pathways. Grounded in the Pressure–State–Response (PSR) theoretical framework, this study constructs a multidimensional evaluation system for comprehensive urban resilience. Through the integration of a combined weighting method and the TOPSIS model, we systematically measure resilience levels across 13 prefecture-level cities in Jiangsu Province, with the obstacle degree model employed to identify critical resilience constraints. The findings reveal significant spatial heterogeneity in regional resilience patterns. High-resilience cities establish positive feedback mechanisms through economic foundations, innovation-driven strategies, and institutional coordination. Conversely, low-resilience cities face multidimensional constraints, including industrial structure imbalance, inadequate social security systems, and infrastructure deficiencies. The resilience disparity stems from the coupling effects of systemic multidimensional elements, with three core obstacles identified: energy consumption and population pressure in the Pressure dimension, medical resource scarcity and innovation deficit in the State dimension, and fiscal expenditure inefficiency in the Response dimension. The study proposes strategic interventions, including fiscal structure optimization, cross-regional resource coordination enhancement, and innovation–translation mechanism improvement, to facilitate urban systems’ transformation from passive resistance to proactive adaptation. This research provides novel perspectives for analyzing complex system resilience evolution and offers scientific grounds for urban agglomeration risk prevention and sustainable development. Full article

In the era of combined antiretroviral therapy, around 50% of chronic HIV (+) individuals show varying degrees of memory and cognitive deficiency (NeuroHIV), a phenomenon of accelerated brain aging. HIV protein transactivator of transcription (TAT) has been well-accepted as a risk factor contributing to NeuroHIV through dysregulating microglia (Mg) functions. Previous studies have demonstrated that HIV-TAT can affect lipid metabolism, immune responses, autophagy, and senescence in rodent Mg. However, due to the significant species differences between rodent and human Mg (hMg), it is essential to take caution when interpreting the results obtained from rodent models into human conditions. For the unanswered questions, we generated hMg from human inducible pluripotent stem cells (iPSCs) and exposed them to HIV-TAT. The results obtained from Flow analysis and immunostaining experiments reveal that TAT can induce LD accumulation and increase perilipin-2 (Plin2) levels in hMg. Meanwhile, HIV-TAT can upregulate autophagosome formation and p53 levels. Through human immune array assay, we showed that TAT can increase the expression of multiple pro-inflammatory mediators, cytokines, and chemokines in hMg. Extensive bioinformatic analysis shows that HIV-TAT can affect multiple neuroimmune signaling pathways and indicates that microRNAs (miRNAs) are coherently involved in such dysregulation. Overall, our findings provide direct evidence showing that HIV-TAT can affect lipid metabolism, autophagy, senescence signaling, and multiple neuroimmune-related pathways in hMg and indicate the roles of novel miRNAs on NeuroHIV pathogenesis, which deserves further investigations. Full article

This study focuses on a subtropical evergreen broad-leaved forest in China, utilizing a large permanent plot established in the Yaoluoping National Nature Reserve. By integrating data from a full-stem census and total station surveying, we analyzed the phylogenetic structure of the plant community as a whole and across different life-history stages (saplings, juveniles, and adults) while quantitatively assessing microtopographic variables and an interspecific competition index. The results indicate that the overall community in the Yaoluoping plot exhibited a weakly overdispersed pattern, and key microtopographic factors—including aspect, terrain position index (TPI), terrain ruggedness index (TRI), roughness, and flow direction—significantly influenced the evolution of phylogenetic structure. Distinctions were also observed among saplings, juveniles, and adults in phylogenetic structuring across life-history stages. Specifically, saplings displayed a higher degree of phylogenetic clustering, significantly influenced by density, elevation, TPI, and flow direction—suggesting that environmental filtering predominates at this stage, possibly due to lower environmental tolerance, limited dispersal ability, and conspecific negative density dependence. In contrast, juveniles and adults showed a more dispersed phylogenetic structure, with density, interspecific competition, aspect, TRI, TPI, and roughness significantly correlated with phylogenetic patterns, indicating that competition and niche differentiation become increasingly important as trees mature and establish within the community. Interspecific competition was found to play a crucial role in community structuring: the competition index was generally negatively correlated with the net relatedness index (NRI) and nearest taxon index (NTI) in juveniles and adults, implying that intense competition leads to the exclusion of some species and reduces overall diversity, with the strength and significance of competitive effects differing across stages. This study enhances our understanding of the complex interplay between microtopography and interspecific competition in shaping the phylogenetic structure and diversity of subtropical evergreen broad-leaved forests, elucidates the coupled mechanisms among microtopography, phylogenetic structure, and competition, and provides a scientific basis for forest conservation and management. Full article