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Keywords = Glycine max (L.) Merril

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18 pages, 11767 KB  
Article
Comprehensive Evaluation of Agronomic Traits and Nutritional Composition in Summer-Sown Vegetable Soybean Varieties from Shanghai, China
by Biting Cao, Lihua Zhu, Jiaqi You, Yuan Yuan, Weihong Gu, Hongjuan Yang, Duo Lv, Qingzhu Li and Chaohan Li
Foods 2026, 15(13), 2382; https://doi.org/10.3390/foods15132382 - 3 Jul 2026
Viewed by 428
Abstract
Shanghai-native vegetable soybean (Glycine max [L.] Merril) landraces are valuable germplasms, but their systematic evaluation for agronomic and nutritional traits remains insufficient. This study aimed to assess their phenotypic and nutritional diversity to explore their potential for breeding and meeting dietary needs. [...] Read more.
Shanghai-native vegetable soybean (Glycine max [L.] Merril) landraces are valuable germplasms, but their systematic evaluation for agronomic and nutritional traits remains insufficient. This study aimed to assess their phenotypic and nutritional diversity to explore their potential for breeding and meeting dietary needs. Twenty-nine local landraces and one control cultivar (‘Qingsu 7’) were evaluated for key agronomic traits, yield components, nutritional traits, and isoflavone profiles, using hierarchical clustering, principal component analysis (PCA), and correlation analysis. Substantial phenotypic diversity was found, with the germplasm classified into four groups. First pod height and effective pods per plant were highly variable. Nutritional traits showed low variability for crude protein but high diversity for crude fat, soluble sugars (dominated by sucrose), vitamin C, and free amino acids. Total isoflavone content in dry seeds varied widely, with genistin, daidzin, and daidzein as the main forms. ‘Xiangshui Maodou’ had high free amino acids and vitamin C, ‘Heiyan Susudou’ showed superior soluble sugar content, and two landraces exceeded 1500 μg/g DW total isoflavones. The landraces possess rich phenotypic diversity and nutritional diversity. This germplasm represents a valuable resource for breeding programs to enhance crop quality and address global nutritional demands. Full article
(This article belongs to the Special Issue Soybean and Human Nutrition)
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26 pages, 1764 KB  
Article
Insights into Selenium-Modulated Amino Acids and Carbohydrates as Osmolytes Linked to Photosynthetic Efficiency in Drought-Stressed Edamame
by Masego Sekhurwane, Mpho Mafa, Zoltán Kovács, László Kaszás, Béla Kovács, Brigitta Tóth and Makoena Joyce Moloi
Plants 2026, 15(13), 1943; https://doi.org/10.3390/plants15131943 - 24 Jun 2026
Viewed by 316
Abstract
Drought impairs osmotic adjustment and photosynthetic performance in legumes; however, the role of micronutrients in modulating these responses across genotypes remains unclear. This study investigated the effects of selenium on the osmolytes and photosynthetic efficiency in two vegetable-soybean (Glycine max L. Merrill) [...] Read more.
Drought impairs osmotic adjustment and photosynthetic performance in legumes; however, the role of micronutrients in modulating these responses across genotypes remains unclear. This study investigated the effects of selenium on the osmolytes and photosynthetic efficiency in two vegetable-soybean (Glycine max L. Merrill) cultivars differing in drought responses: UVE14 (drought-tolerant) and UVE17 (drought-susceptible). Plants were grown under well-watered (100% soil water-holding capacity, WHC) and water-limited (30% soil WHC) conditions, with or without soil-applied selenium. Free amino acids, soluble sugars, chlorophyll pigments, vegetation indices, and chlorophyll fluorescence parameters were assessed at the flowering and pod-filling stages. Under drought conditions, selenium enhanced tolerance primarily by modulating free amino acid metabolism at flowering, increasing aspartate, asparagine, glutamine, and glutamate levels, alongside improvements in chlorophyll content, canopy greenness, and PSII photochemical efficiency. These responses indicate a coordinated adjustment between nitrogen metabolism and photosynthetic function. Both cultivars benefited from selenium application, although the responses were more pronounced in the susceptible cultivar (UVE17). Selenium-induced changes in soluble sugar content were greater under well-watered conditions in both cultivars. The limited accumulation of stress-associated osmolytes, such as proline, following selenium soil drench suggests reduced cellular disruption and mitigation of drought-induced stress. These findings highlight selenium as a context-dependent modulator of drought resilience and emphasize cultivar- and developmental stage-specific effects. Full article
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18 pages, 4401 KB  
Article
Analysis on Biofertilization-Induced Memory Acquisition for Heat Stress Mitigation in Soybean Plants
by Helena Chaves Tasca, Douglas Antônio Posso, Eugenia Jacira Bolacel Braga, Elise Réthoré, Sylvain Pluchon, Giancarlo Ribas Valduga, João Paulo Smith, Luiz Fernando Melgaço Bloisi and Gustavo Maia Souza
Plants 2026, 15(10), 1468; https://doi.org/10.3390/plants15101468 - 12 May 2026
Cited by 1 | Viewed by 737
Abstract
The increasing frequency of high-temperature episodes associated with climate change poses challenges to crop productivity. Stress priming could help to mitigate these effects, with the capacity to enhance plant resilience through metabolic adjustments and memory mechanisms. We evaluated the efficacy of the Stress [...] Read more.
The increasing frequency of high-temperature episodes associated with climate change poses challenges to crop productivity. Stress priming could help to mitigate these effects, with the capacity to enhance plant resilience through metabolic adjustments and memory mechanisms. We evaluated the efficacy of the Stress Memory Encoder biofertilizer (SME, TIMAC Agro) as a seed treatment to induce heat stress (HS) memory in soybean plants [Glycine max (L.) Merrill]. In Experiment 1, plants with SME (0, 2, and 4 mL kg−1) were exposed to HS (35 °C for 48 h) at V3 and V6 vegetative stages. The 4 mL kg−1 dose at V6 under HS consistently improved photosynthetic traits and reductions in reactive oxygen species and lipid peroxidation. Non-enzymatic antioxidants were detected to this dose at V3. Multivariate analysis revealed patterns consistent with dose-dependent physiological adjustments and potential memory acquisition. In Experiment 2, plants treated with SME were exposed to HS (34 °C for 48 h) consecutively (V3 + V6). The SME-primed plants had a higher expression of transcript factors and genes related to HS. Overall, the findings indicate that SME may act as a priming agent capable of inducing somatic memory and enhancing adaptive responses to HS in soybean. Full article
(This article belongs to the Section Plant Response to Abiotic Stress and Climate Change)
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20 pages, 6122 KB  
Article
Genome-Wide Identification of the IDD Gene Family in Soybean (Glycine max) and Their Expression Profiles in Response to Drought, Salt Stress, and Different Photoperiod Conditions
by Rouxing Li, Zixiang Ning, Zhihui Dong, Jian Xi, Chenjie Shi, Xianlian Chen, Qingyuan He, Shaochuang Chuang, Xue Yang and Yingjie Shu
Genes 2026, 17(4), 489; https://doi.org/10.3390/genes17040489 - 20 Apr 2026
Viewed by 716
Abstract
Background: INDETERMINATE DOMAIN proteins (IDDs) are a plant-specific transcription factor family, and members of this family play crucial roles in regulating growth and development as well as environmental adaptation. However, a comprehensive analysis of the IDD family in soybean [Glycine max (L.) [...] Read more.
Background: INDETERMINATE DOMAIN proteins (IDDs) are a plant-specific transcription factor family, and members of this family play crucial roles in regulating growth and development as well as environmental adaptation. However, a comprehensive analysis of the IDD family in soybean [Glycine max (L.) Merrill] is limited. Methods and Results: A total of 27 GmIDD genes were identified in the soybean genome, unevenly distributed across 14 chromosomes, and their encoded proteins all harbor a conserved INDETERMINATE (ID) domain with two Cys2His2 (C2H2) and two Cys2HisCys (C2HC) zinc finger motifs. Phylogenetic analysis classified these GmIDD genes into three subgroups. Soybean GmIDD genes exhibit high homology with their Arabidopsis thaliana IDD counterparts. Cis-acting element analysis indicated that the promoters of GmIDD genes are enriched in light-responsive elements (such as Box4), hormone-responsive elements (such as ABRE and AuxRR-core), and abiotic stress-responsive elements (such as MBS and LTR). The qRT-PCR results showed that GmIDD3/5/14/22/26 were upregulated under salt stress, while GmIDD8/9/10/12/16/17/19/20/23/24/25/27 were obviously downregulated during treatment. Under drought stress, the expression levels of GmIDD4/6/7/10/14/16/19/22/24/25/26/27 were upregulated during the treatment. The expression levels of GmIDD1/2/3/4/12/14/15/16/17/18/22/23/25/26 were induced by short-day conditions, whereas GmIDD9/13/19/21 were induced by long-day conditions in soybean leaves. Conclusions: This study provides a theoretical basis for further understanding the functions of the soybean IDD gene family in abiotic stress tolerance and photoperiod adaptability. Full article
(This article belongs to the Section Plant Genetics and Genomics)
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37 pages, 38849 KB  
Article
Integrating Remote-Sensing Data: UAV Multispectral Imagery, Drone-Derived 3D Canopy Traits and Gridded Climate Variables to Support Potassium Management and Soybean Yield Estimation
by João Vitor Ferreira Gonçalves, Luis Guilherme Teixeira Crusiol, Fabio Alvares de Oliveira, Caio Almeida de Oliveira, Nicole Ghinzelli Vedana, Daiane de Fatima da Silva Haubert, Weslei Augusto Mendonça, Karym Mayara de Oliveira, Thiago Rutz, Renato Herrig Furlanetto, José Alexandre M. Demattê, Roney Berti de Oliveira, Amanda Silveira Reis, Renan Falcioni and Marcos Rafael Nanni
Remote Sens. 2026, 18(7), 1054; https://doi.org/10.3390/rs18071054 - 1 Apr 2026
Viewed by 1174
Abstract
This study develops and validates an integrated framework that combines UAV multispectral imagery and canopy structural metrics with gridded climatic variables to predict soybean (Glycine max (L.) Merrill) foliar potassium (K) status and grain yield. Field experiments were conducted over three consecutive [...] Read more.
This study develops and validates an integrated framework that combines UAV multispectral imagery and canopy structural metrics with gridded climatic variables to predict soybean (Glycine max (L.) Merrill) foliar potassium (K) status and grain yield. Field experiments were conducted over three consecutive growing seasons (2022–2023, 2023–2024, and 2024–2025) under different potassium fertilisation strategies and environmental conditions. Machine learning models, particularly the random forest algorithm, were applied to multisource datasets, including UAV-derived canopy structural traits (height and canopy area), spectral indices (NDVI), meteorological variables, and fertilisation information. The foliar K prediction models achieved high accuracy (R2 up to 0.85), while the yield prediction models achieved R2 values between 0.71 and 0.81. The inclusion of the potassium rate and fertilisation strategy further improved model performance, highlighting the strong influence of potassium supply and fertilisation management on plant physiological responses. Interestingly, compared with those required to stabilise grain yield, foliar potassium saturation occurred at substantially higher K2O rates, indicating the occurrence of luxury potassium uptake. The association of UAV-derived canopy metrics with this pattern suggests that remote sensing may help detect subtle nutritional dynamics that are not directly reflected in yield responses. Model interpretability using SHAP analysis identified relationships within the analysed dataset that were consistent with physiological expectations, with positive contributions associated with canopy vigour and negative contributions associated with thermal stress. In addition, probabilistic SHAP analysis provided a decision-oriented perspective by quantifying yield probabilities under contrasting potassium management regimes and climate scenarios. Overall, within the experimental conditions studied, the proposed framework enabled a rapid assessment of crop nutritional status, yield prediction, and the evaluation of fertilisation strategies. The integration of UAV data, climatic variables, and machine learning provides an interpretable basis for potassium management and soybean yield forecasting within the experimental conditions studied, while broader transferability requires external validation. Full article
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11 pages, 824 KB  
Article
Survival, Development, and Reproduction of Aphis glycines (Hemiptera: Aphididae) Under a Diurnal Temperature of 33 °C over Three Generations
by Qi Wang, Yifan Tian, Wantong Zou, Yanpeng Liu, Cirui Wu, Zhenqi Tian and Jian Liu
Agronomy 2026, 16(5), 555; https://doi.org/10.3390/agronomy16050555 - 2 Mar 2026
Viewed by 668
Abstract
The soybean aphid, Aphis glycines Matsumura, is an important pest in soybean, Glycine max (L.) Merrill. To investigate the adaptability of various A. glycines generations to high temperatures, this study assessed various life parameters of A. glycines exposed to a diurnal temperature of [...] Read more.
The soybean aphid, Aphis glycines Matsumura, is an important pest in soybean, Glycine max (L.) Merrill. To investigate the adaptability of various A. glycines generations to high temperatures, this study assessed various life parameters of A. glycines exposed to a diurnal temperature of 33 °C and a nocturnal temperature of 20 °C (33 °C/20 °C) over three generations, compared to a diurnal temperature of 25 °C and a nocturnal temperature of 20 °C (25 °C/20 °C), by life table approach. The adult survival rates of A. glycines in the first (G1), second (G2), and third generations (G3) at 33 °C/20 °C were found to be lower than those at 25 °C/20 °C. Additionally, exposure to 33 °C/20 °C reduced aphid total longevity, oviposition day, and fecundity for G1, G2, and G3 compared to 25 °C/20 °C. These findings indicate that A. glycines can develop and reproduce at a diurnal temperature of 33 °C across the three tested generations, albeit with variations in certain life parameters compared to 25 °C. The results are important for understanding the adaptability of A. glycines to temperature fluctuations and for predicting the population dynamics of this pest in soybeans in Heilongjiang, China, which is currently experiencing rising environmental temperatures. Full article
(This article belongs to the Section Pest and Disease Management)
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18 pages, 940 KB  
Review
Advancements, Challenges, and Future Perspectives of Soybean-Integrated Pest Management, Emphasizing the Adoption of Biological Control by the Major Global Producers
by Adeney de F. Bueno, William W. Hoback, Yelitza C. Colmenarez, Ivair Valmorbida, Weidson P. Sutil, Lian-Sheng Zang and Renato J. Horikoshi
Plants 2026, 15(3), 366; https://doi.org/10.3390/plants15030366 - 24 Jan 2026
Cited by 6 | Viewed by 2391
Abstract
Soybean, Glycine max (L.) Merrill, is usually grown on a large scale, with pest control based on chemical insecticides. However, the overuse of chemicals has led to several adverse effects requiring more sustainable approaches to pest control. Results from Integrated Pest Management (IPM) [...] Read more.
Soybean, Glycine max (L.) Merrill, is usually grown on a large scale, with pest control based on chemical insecticides. However, the overuse of chemicals has led to several adverse effects requiring more sustainable approaches to pest control. Results from Integrated Pest Management (IPM) employed on Brazilian soybean farms indicate that adopters of the technology have reduced insecticide use by approximately 50% relative to non-adopters, with yields comparable to or slightly higher than those of non-adopters. This reduction can be explained not only by the widespread use of Bt soybean cultivars across the country but also by the adoption of economic thresholds (ETs) in a whole Soybean-IPM package, which has reduced insecticide use. However, low refuge compliance has led to the first cases of pest resistance to Cry1Ac, thereby leading to the return of overreliance on chemical control and posing additional challenges for IPM practitioners. The recent global agenda for decarbonized agriculture might help to support the adoption of IPM since less chemical insecticides sprayed over the crops reduces CO2-equivalent emissions from its application. In addition, consumers’ demand for less pesticide use in food production has favored the increased use of bio-inputs in agriculture, helping mitigate overdependence of agriculture on chemical inputs to preserve yields. Despite the challenges of adopting IPM discussed in this review, the best way to protect soybean yield and preserve the environment remains as IPM, integrating plant resistance (including Bt cultivars), ETs, scouting procedures, selective insecticides, biological control, and other sustainable tools, which help sustain environmental quality in an ecological and economical manner. Soon, those tools will include RNAi, CRISPR-based control strategies, among other sustainable alternatives intensively researched around the world. Full article
(This article belongs to the Special Issue Integrated Pest Management of Field Crops)
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22 pages, 4206 KB  
Article
Sorbitol-Stabilized Silicon Formulation Improve Root Traits and Antioxidant Response in Drought-Stressed Soybean
by Felipe Sousa Franco, Jonas Pereira de Souza Júnior, Renato de Mello Prado, Milton Garcia Costa, Cid Naudi Silva Campos, Leonardo Motta Berzaghi Junior, Nícolas Leite Capucin, Gustavo Paparotto Lopes, Gabriel Sgarbiero Montanha, Marcia Leticia Monteiro Gomes, Ana Carina da Silva Cândido Seron, Hudson Wallace Pereira de Carvalho, José Lavres and Renan Caldas Umburanas
Plants 2026, 15(2), 197; https://doi.org/10.3390/plants15020197 - 8 Jan 2026
Cited by 1 | Viewed by 1390
Abstract
Silicon (Si) plays a critical role in regulating plant physiological processes, particularly through its influence on non-enzymatic antioxidant systems and amino acid metabolism. This study aims to assess soybean performance in response to both soil and foliar Si applications under well-watered and drought [...] Read more.
Silicon (Si) plays a critical role in regulating plant physiological processes, particularly through its influence on non-enzymatic antioxidant systems and amino acid metabolism. This study aims to assess soybean performance in response to both soil and foliar Si applications under well-watered and drought conditions, with the goal of enhancing Si accumulation in plant tissues and potentially strengthening the crop’s physiological responses to water deficit stress. This is especially pertinent given that the mechanisms underlying Si fertilization and its contribution to drought tolerance in soybean remain poorly understood. Greenhouse experiments were conducted using a 3 × 2 factorial design. The factors were: (i) three foliar Si treatments: control (no Si), potassium silicate (SiK; 128 g L−1 Si, 126.5 g L−1 K2O, pH 12.0), and sorbitol-stabilized potassium silicate (SiKe; 107 g L−1 Si, 28.4 g L−1 K2O, 100 mL L−1 sorbitol, pH 11.8); and (ii) two soil water levels: well-watered (80% field capacity) and water-restricted (40% field capacity), the latter simulating tropical dry spells. Silicon was applied to the soil via irrigation and to the leaves via foliar spraying prior to the onset water restriction. All Si solutions were adjusted to pH 7.0 with 1 M HCl immediately before application. Potassium (K) levels were standardized across treatments through supplementary applications of KCl to both soil and foliage. Biometric and physiological parameters were subsequently measured. Sorbitol-stabilized Si enhanced Si accumulation in soybean tissues and improved plant resilience under both well-watered and drought conditions by promoting key physiological traits, including increased levels of daidzein and ascorbic acid levels, along with reduced amino acid concentrations. It also improved biometric parameters such as leaf area, root development, and number of pods per plant. These findings further support the role of Si as a beneficial element in enhancing stress tolerance and contributing to sustainable agricultural practices. Full article
(This article belongs to the Special Issue Silicon and Its Physiological Role in Plant Growth and Development)
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17 pages, 1161 KB  
Article
Soybean [Glycine max (L.) Merrill] Growth and Yield Responses to Cultivar and Nitrogen Fertilization
by Mariola Staniak, Edyta Baca, Katarzyna Czopek and Anna Stępień-Warda
Agronomy 2025, 15(12), 2840; https://doi.org/10.3390/agronomy15122840 - 10 Dec 2025
Cited by 1 | Viewed by 1756
Abstract
The aim of the study was to determine the effect of cultivar and nitrogen fertilization on the morphological and physiological traits and yield of soybean (Glycine max (L.) Merrill) grown in central-eastern Poland. In a strict, two-factor field experiment, four soybean cultivars [...] Read more.
The aim of the study was to determine the effect of cultivar and nitrogen fertilization on the morphological and physiological traits and yield of soybean (Glycine max (L.) Merrill) grown in central-eastern Poland. In a strict, two-factor field experiment, four soybean cultivars were used: ‘Abelina’, ‘Malaga’, ‘Coraline’, and ‘Petrina’, and three nitrogen rates: 0, 30, and 60 kg N ha−1. The moderate rate (N30) was applied before sowing, while the higher rate (N60) was divided into two parts, with 50% applied before sowing and 50% top-dressed at BBCH 61. The studies were conducted during two growing seasons. It was shown that both the cultivar and nitrogen fertilization significantly affected plant height, leaf area index (LAI), leaf greenness index (SPAD), and chlorophyll fluorescence indices (Fv/Fm, PI). The interaction among cultivar, fertilization, and years was significant for SPAD and Fv/Fm index, indicating a strong influence of environmental factors on plant response. Nitrogen fertilization increased plant height and chlorophyll content but reduced fluorescence indices. Among the cultivars studied, the late-season cultivar ‘Malaga’ was characterized by the highest SPAD index (502), Fv/Fm (0.800), and PI values (4.3), and achieved the highest seed yield (5.06 t ha−1) and thousand-seed weight (230 g). In contrast, the medium-season cultivar ‘Abelina’ showed the lowest SPAD (454), and significantly lower Fv/Fm and PI values (0.790 and 3.51, respectively), resulting in the lowest yield (4.25 t ha−1) and TSW (169.7 g). The application of a moderate rate of nitrogen (N30) improved the physiological indicators of plants and elements of yield structure without reducing the potential photochemical efficiency of PSII, while a higher rate (N60) did not result in a significant increase in yield, despite a greater number of pods and seeds per plant, which may have been due to a reduction in thousand-seed weight. The results highlight the importance of cultivar selection and moderate N fertilization of soybean grown in temperate climates and indicate the need for further research on the physiological mechanisms that determine cultivar-specific nitrogen use efficiency and yield stability under environmental stress. Full article
(This article belongs to the Special Issue Conventional and Alternative Fertilization of Crops)
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11 pages, 1209 KB  
Article
Optimizing Sowing Time Using Cumulative Temperature-Tailored Yield of Vegetable Soybean
by Jeongmin Lee, Minji Kim, Boyun Lee, Minchang Kim, SeungHo Jeon, Pyeong Shin, Hyeonsoo Jang and Jwakyung Sung
Agronomy 2025, 15(12), 2767; https://doi.org/10.3390/agronomy15122767 - 30 Nov 2025
Cited by 1 | Viewed by 929
Abstract
Cumulative temperature (CT) serves as a critical factor influencing soybean growth and yield, particularly under changing climatic conditions. This study investigated the relationship between CT, growth traits, and yield components of two vegetable soybean (Glycine max (L.) Merrill) cultivars, ‘Pungsannamulkong’ and ‘Aram’, across [...] Read more.
Cumulative temperature (CT) serves as a critical factor influencing soybean growth and yield, particularly under changing climatic conditions. This study investigated the relationship between CT, growth traits, and yield components of two vegetable soybean (Glycine max (L.) Merrill) cultivars, ‘Pungsannamulkong’ and ‘Aram’, across four sowing dates (late May to late June) in a mid-mountainous region of Korea during 2023–2024. Yield exhibited strong positive correlations with the number of pods per plant (r = 0.88, p < 0.001) and 100-seed weight (r = 0.86, p < 0.001), both indirectly influenced by CT. Structural analysis indicated that CT was indirectly responsible for yield by pod number per plant, which being affected by stem elongation at the R2 stage. The optimal CT range for stable yield was identified as being between 3100 °C and 3500 °C, corresponding to early to mid-June sowing. These findings highlight that optimizing sowing time to secure adequate CT during vegetative growth is a practical adaptation strategy to sustain soybean productivity in mid-mountainous regions under climate warming scenarios. Full article
(This article belongs to the Special Issue Adaptive Adjustment of Crop Management Practices Under Global Warming)
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14 pages, 3744 KB  
Article
Seed-Applied Cobalt, Molybdenum, and Nickel Improve Nitrogen Metabolism in Soybean Plants Across Seed Vigor Levels
by Abimael dos Santos Carmo-Filho, Carlos Henrique Queiroz Rego, Glória de Freitas Rocha Ribeiro, Rafael Mateus Alves, Lucas Alves de Almeida, Bruna Wurr Rodak, José Lavres and Francisco Guilhien Gomes-Junior
Plants 2025, 14(21), 3368; https://doi.org/10.3390/plants14213368 - 4 Nov 2025
Cited by 5 | Viewed by 1941
Abstract
Cobalt, molybdenum, and nickel are elements directly involved in biological nitrogen fixation in legume plants. However, there is a lack of information about the effects of the interaction among these elements on seed vigor and plant development. This study aimed to evaluate the [...] Read more.
Cobalt, molybdenum, and nickel are elements directly involved in biological nitrogen fixation in legume plants. However, there is a lack of information about the effects of the interaction among these elements on seed vigor and plant development. This study aimed to evaluate the effects of different doses of these elements on soybean seeds with higher and lower vigor, focusing on nitrogen metabolism and plant development under controlled conditions. The two lots of soybean seeds (higher and lower vigor) were treated with doses of 0, 2, 4, 6, and 8 mL kg−1 of seeds of a liquid commercial product composed of cobalt, molybdenum, and nickel. At the full flowering stage, urease and nitrogenase activities, dry biomass of shoots, roots, and nodules, nitrogen concentration in shoots, plant height, number of nodules, and the efficiency of biological nitrogen fixation (measured by nitrogen-15 isotopic ratio) were assessed. Urease activity increased by 191% in high-vigor seed plants and 65% in low-vigor seed plants. Nitrogenase activity was higher in higher-vigor plants. Nodule dry biomass increased by 42% in lower-vigor plants compared to the control treatment, while in higher-vigor plants, it decreased with increasing doses. Shoot biomass was 30% higher than the control at the 2 mL kg−1 dose. In general, the best responses to the application of the elements in the evaluated variables were observed with the doses of 2 and 4 mL kg−1. It is concluded that the appropriate application of cobalt, molybdenum, and nickel on seeds enhances growth and symbiotic efficiency. However, excessive doses may cause phytotoxic effects. Full article
(This article belongs to the Special Issue Advances in Nitrogen Nutrition in Plants)
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23 pages, 965 KB  
Article
Effectiveness of Soil, Foliar, and Seed Selenium Applications in Modulating Physio-Biochemical, and Yield Responses to Drought Stress in Vegetable Soybean (Glycine max L. Merrill)
by Masego Sekhurwane, Brigitta Tóth and Makoena Joyce Moloi
Plants 2025, 14(21), 3261; https://doi.org/10.3390/plants14213261 - 24 Oct 2025
Cited by 4 | Viewed by 1611
Abstract
Drought stress severely affects the physio-biochemical processes and yield of nutritious crops like vegetable soybean (Glycine max L. Merrill), threatening global food security and emphasising the need for effective strategies to improve drought tolerance. This study, conducted under controlled conditions in a [...] Read more.
Drought stress severely affects the physio-biochemical processes and yield of nutritious crops like vegetable soybean (Glycine max L. Merrill), threatening global food security and emphasising the need for effective strategies to improve drought tolerance. This study, conducted under controlled conditions in a greenhouse, investigates the effects of three selenium application methods (seed priming, foliar spray, and soil application) on photosynthesis efficiency, relative water content (RWC), hydrogen peroxide (H2O2), antioxidative responses, and yield traits of two vegetable soybean cultivars, UVE14 (drought-tolerant) and UVE17 (drought-susceptible), under drought stress. Among the three Se application methods, soil application was the most effective in improving drought tolerance and yield performance in both cultivars. In UVE17 (drought-susceptible), soil application significantly increased the number of seeds per plant (SPP) and the number of pods per plant (PPP), while in UVE14 (drought-tolerant) SPP increased. Selenium foliar spray and seed priming treatments did not increase yield in drought-stressed UVE14, suggesting that they are unlikely to further enhance tolerance in drought-tolerant cultivars. For UVE17 under drought conditions, selenium soil application improved key physio-biochemical indicators of drought tolerance, including photosynthesis efficiency (total performance of photosystems I and II, total chlorophyll content, and stomatal conductance), water retention (RWC), and carotenoid content. These improved physio-biochemical responses directly impacted yield outcomes. Notably, RWC and total chlorophyll content at the pod-filling stage in drought-stressed UVE17 were positively correlated with an increase in PPP under selenium soil application. Selenium soil application stands out as the most effective method for enhancing drought tolerance in vegetable soybean, presenting a promising and practical solution for enhanced crop production under climate change. Full article
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31 pages, 45979 KB  
Article
High-Throughput Identification and Prediction of Early Stress Markers in Soybean Under Progressive Water Regimes via Hyperspectral Spectroscopy and Machine Learning
by Caio Almeida de Oliveira, Nicole Ghinzelli Vedana, Weslei Augusto Mendonça, João Vitor Ferreira Gonçalves, Dheynne Heyre Silva de Matos, Renato Herrig Furlanetto, Luis Guilherme Teixeira Crusiol, Amanda Silveira Reis, Werner Camargos Antunes, Roney Berti de Oliveira, Marcelo Luiz Chicati, José Alexandre M. Demattê, Marcos Rafael Nanni and Renan Falcioni
Remote Sens. 2025, 17(20), 3409; https://doi.org/10.3390/rs17203409 - 11 Oct 2025
Cited by 6 | Viewed by 2639
Abstract
The soybean Glycine max (L.) Merrill is a key crop in Brazil’s agricultural sector and is essential for both domestic food security and international trade. However, water stress severely impacts its productivity. In this study, we examined the physiological and biochemical responses of [...] Read more.
The soybean Glycine max (L.) Merrill is a key crop in Brazil’s agricultural sector and is essential for both domestic food security and international trade. However, water stress severely impacts its productivity. In this study, we examined the physiological and biochemical responses of soybean plants to various water regimes via hyperspectral reflectance (350–2500 nm) and machine learning (ML) models. The plants were subjected to eleven distinct water regimes, ranging from 100% to 0% field capacity, over 14 days. Seventeen key physiological parameters, including chlorophyll, carotenoids, flavonoids, proline, stress markers and water content, and hyperspectral data were measured to capture changes induced by water deficit. Principal component analysis (PCA) revealed significant spectral differences between the water treatments, with the first two principal components explaining 88% of the variance. Hyperspectral indices and reflectance patterns in the visible (VIS), near-infrared (NIR), and shortwave-infrared (SWIR) regions are linked to specific stress markers, such as pigment degradation and osmotic adjustment. Machine learning classifiers, including random forest and gradient boosting, achieved over 95% accuracy in predicting drought-induced stress. Notably, a minimal set of 12 spectral bands (including red-edge and SWIR features) was used to predict both stress levels and biochemical changes with comparable accuracy to traditional laboratory assays. These findings demonstrate that spectroscopy by hyperspectral sensors, when combined with ML techniques, provides a nondestructive, field-deployable solution for early drought detection and precision irrigation in soybean cultivation. Full article
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24 pages, 4427 KB  
Article
Three-Dimensional Convolutional Neural Networks (3D-CNN) in the Classification of Varieties and Quality Assessment of Soybean Seeds (Glycine max L. Merrill)
by Piotr Rybacki, Kiril Bahcevandziev, Diego Jarquin, Ireneusz Kowalik, Andrzej Osuch, Ewa Osuch and Janetta Niemann
Agronomy 2025, 15(9), 2074; https://doi.org/10.3390/agronomy15092074 - 28 Aug 2025
Cited by 3 | Viewed by 2328
Abstract
The precise identification, classification, sorting, and rapid and accurate quality assessment of soybean seeds are extremely important in terms of the continuity of agricultural production, varietal purity, seed processing, protein extraction, and food safety. Currently, commonly used methods for the identification and quality [...] Read more.
The precise identification, classification, sorting, and rapid and accurate quality assessment of soybean seeds are extremely important in terms of the continuity of agricultural production, varietal purity, seed processing, protein extraction, and food safety. Currently, commonly used methods for the identification and quality assessment of soybean seeds include morphological analysis, chemical analysis, protein electrophoresis, liquid chromatography, spectral analysis, and image analysis. The use of image analysis and artificial intelligence is the aim of the presented research, in which a method for the automatic classification of soybean varieties, the assessment of the degree of damage, and the identification of geometric features of soybean seeds based on numerical models obtained using a 3D scanner has been proposed. Unlike traditional two-dimensional images, which only represent height and width, 3D imaging adds a third dimension, allowing for a more realistic representation of the shape of the seeds. The research was conducted on soybean seeds with a moisture content of 13%, and the seeds were stored in a room with a temperature of 20–23 °C and air humidity of 60%. Individual soybean seeds were scanned to create 3D models, allowing for the measurement of their geometric parameters, assessment of texture, evaluation of damage, and identification of characteristic varietal features. The developed 3D-CNN network model comprised an architecture consisting of an input layer, three hidden layers, and one output layer with a single neuron. The aim of the conducted research is to design a new, three-dimensional 3D-CNN architecture, the main task of which is the classification of soybean seeds. For the purposes of network analysis and testing, 22 input criteria were defined, with a hierarchy of their importance. The training, testing, and validation database of the SB3D-NET network consisted of 3D models obtained as a result of scanning individual soybean seeds, 100 for each variety. The accuracy of the training process of the proposed SB3D-NET model for the qualitative classification of 3D models of soybean seeds, based on the adopted criteria, was 95.54%, and the accuracy of its validation was 90.74%. The relative loss value during the training process of the SB3D-NET model was 18.53%, and during its validation process, it was 37.76%. The proposed SB3D-NET neural network model for all twenty-two criteria achieves values of global error (GE) of prediction and classification of seeds at the level of 0.0992. Full article
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33 pages, 5718 KB  
Article
Progressive Water Deficit Impairs Soybean Growth, Alters Metabolic Profiles, and Decreases Photosynthetic Efficiency
by Renan Falcioni, Caio Almeida de Oliveira, Nicole Ghinzelli Vedana, Weslei Augusto Mendonça, João Vitor Ferreira Gonçalves, Daiane de Fatima da Silva Haubert, Dheynne Heyre Silva de Matos, Amanda Silveira Reis, Werner Camargos Antunes, Luis Guilherme Teixeira Crusiol, Rubson Natal Ribeiro Sibaldelli, Alexandre Lima Nepomuceno, Norman Neumaier, José Renato Bouças Farias, Renato Herrig Furlanetto, José Alexandre Melo Demattê and Marcos Rafael Nanni
Plants 2025, 14(17), 2615; https://doi.org/10.3390/plants14172615 - 22 Aug 2025
Cited by 18 | Viewed by 2285
Abstract
Soybean (Glycine max (L.) Merrill) is highly sensitive to water deficit, particularly during the vegetative phase, when morphological and metabolic plasticity support continued growth and photosynthetic efficiency. We applied eleven water regimes, from full irrigation (W100) to total water withholding (W0), to [...] Read more.
Soybean (Glycine max (L.) Merrill) is highly sensitive to water deficit, particularly during the vegetative phase, when morphological and metabolic plasticity support continued growth and photosynthetic efficiency. We applied eleven water regimes, from full irrigation (W100) to total water withholding (W0), to plants grown under controlled conditions. After 14 days, we quantified morphophysiological, biochemical, leaf optical, gas exchange, and chlorophyll a fluorescence traits. Drought induces significant reductions in leaf area, biomass, pigment pools, and photosynthetic rates (A, gs, ΦPSII) while increasing the levels of oxidative stress markers (electrolyte leakage, ROS) and proline accumulation. OJIP transients and JIP test metrics revealed reduced electron-transport efficiency and increased energy dissipation for many parameters under severe stress. Principal component analysis (PCA) clearly separated those treatments. PC1 captured growth and water status variation, whereas PC2 reflected photoprotective adjustments. These data show that progressive drought limits carbon assimilation via coordinated diffusive and biochemical constraints and that the accumulation of proline, phenolics, and lignin is associated with osmotic adjustment, antioxidant buffering, and cell wall reinforcement under stress. The combined use of hyperspectral sensors, gas exchange, chlorophyll fluorescence, and multivariate analyses for phenotyping offers a rapid, nondestructive diagnostic tool for assessing drought severity and the possibility of selecting drought-resistant genotypes and phenotypes in a changing stress environment. Full article
(This article belongs to the Special Issue Plant Challenges in Response to Salt and Water Stress)
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