Search Results (109)

Avian coccidiosis is an intestinal disease caused by Eimeria spp. infection. A deeper understanding of the interaction between host gut microbiota and the Eimeria parasite is crucial for developing alternative therapies to control avian coccidiosis. Here, we used full-length sequencing of 16S ribosomal RNA amplicons to compare changes in the gut microbiota of chickens infected with Eimeria tenella, Eimeria maxima, and Eimeria necatrix, aiming to identify both species-specific and common alterations in gut microbiota at 4 and 10 days post-infection. The result revealed that infection with all three Eimeria species led to a decrease in the abundance of the microbial genera Limosilactobacillus, Streptococcus, Alistipes, Lactobacillus and Phocaeicola, while the abundance of Bacteroides, Escherichia and Ligilactobacillus increased. Escherichia and Enterococcus were most abundant in the jejunum of the E. necatrix-infected group and in the cecum of the E. tenella-infected group, whereas Megamonas abundance was highest in the E. maxima-infected group. LEfSe analysis showed that infection with all three Eimeria species significantly reduced the abundance of 13 bacterial species, including Acetilactobacillus jinshanensis, Bacteroides ndongoniae, Barnesiella viscericola, Christensenella minuta, Enterocloster clostridioformis, Gemella haemolysans_A, Granulicatella adiacens, Lawsonibacter sp000177015, Limosilactobacillus reuteri, Limosilactobacillus reuteri_D, Limosilactobacillus vaginalis_A, Limosilactobacillus caviae, Limosilactobacillus vaginalis. Infection with E. tenella significantly increased the abundance of five bacterial species, including Bacteroides fragilis, Enterococcus cecorum, Helicobacter pylori, Methylovirgula ligni, and Phocaeicola sp900066445. Infection with E. maxima significantly increased the abundance of seven bacterial species, including Clostridioides difficile, Faecalibacterium prausnitzii, Mediterraneibacter torques, Muribaculum intestinale, Mediterraneibacter massiliensis, Phascolarctobacterium faecium, and Phocaeicola plebeius. Infection with E. necatrix significantly increased the abundance of seven bacterial species, including Alistipes sp900290115, Anaerotignum faecicola, Bacteroides fragilis_A, Escherichia coli, Harryflintia acetispora, Pseudoclostridium thermosuccinogenes, and Tidjanibacter inops_A. The results showed that Eimeria infection causes significant species- and time-dependent changes in the gut microbiota of chickens. These findings enhance our understanding of coccidiosis pathogenesis and offer potential targets for developing probiotics. Full article

Rumen development is critical for optimal growth, feed efficiency and health in pre-weaned dairy calves. Butyric acid, a short-chain fatty acid produced in the rumen, has been shown to stimulate epithelial development and modulate immune responses. This study evaluated the effects of butyric salt supplementations, as metabiotics, on rumen morphometry and investigated the potential associations with feed intake, growth performance and health indicators in pre-weaned dairy calves. Thirty calves were randomized into three groups: controls (G1), 25 g (G2) or 50 g (G3) sodium butyrate from birth until weaning. The gross and histological rumen morphometry, dry matter intake, growth performance, complete blood count, total protein determination and fecal (oo)cyst counts for Giardia spp. and Eimeria spp. were analyzed using one-way ANOVA. When significant effects were detected, treatment means were compared using Tukey’s HSD at p ≤ 0.05. Sodium butyrate supplementation produced dose-dependent responses. Compared with controls (p ≤ 0.05), G3 calves had a greater mean papillae height (3.20 vs. 1.36 mm) and rumen wall thickness (7.08 vs. 3.62 mm), higher final body weight (93.9 vs. 80.1 kg), increased daily weight gain (798 vs. 550 g/day), increased total dry matter intake (69.4 vs. 55.1 kg) and improved feed conversion ratio (1.45 vs. 1.67). In addition, G3 calves showed reduced Giardia and Eimeria (oo)cyst excretions and favorable hematological shifts at weaning (i.e., higher hematocrit, hemoglobin and mean corpuscular hemoglobin concentration and altered leukocyte differentials) consistent with improved health. In conclusion, sodium butyrate supplementation in pre-weaned dairy calves resulted in dose-dependent improvements in rumen morphometry, voluntary dry matter intake and growth performance. These physiological benefits were accompanied by decreased Giardia spp. and Eimeria spp. (oo)cyst shedding and by positive shifts in hematological health indicators, suggesting a potential enhancement of the animals’ immune response. Full article

Coccidiosis, caused by Eimeria spp., is a major economic burden in poultry production, prompting growing interest in natural alternatives to synthetic anticoccidials. This study evaluated the use of Polygain™, a sugarcane-derived polyphenol-rich feed material, as a natural anticoccidial in broiler chickens experimentally challenged with Eimeria tenella, E. maxima, and E. acervulina. A total of 144 Ross 308 chicks were allocated to six groups: uninfected–untreated control, infected–untreated control, infected plus nicarbazin + narasin, and three Polygain™ treatment groups (250, 500, and 1000 ppm). Birds were orally challenged with mixed oocysts on day 14. Parameters assessed included body weight gain (BWG), lesion scores (LS), oocyst per gram (OPG), and calculated indices such as relative oocyst production (ROP), reduction in lesion score (RLS), percent optimum anticoccidial activity (POAA), and anticoccidial index (ACI). Polygain™ reduced intestinal lesions (p < 0.05), particularly in the caecum, with complete lesion resolution observed at 1000 ppm by 21 days post-infection. Polygain™ ACI values (143–146) were limited in comparison to nicarbazin + narasin treatment (ACI 160). These findings demonstrate that Polygain™ supplementation confers measurable protective dose related effects against coccidiosis without impairing growth performance, supporting its potential as a natural feed material for integrated coccidiosis management. Full article

Calicophoron daubneyi, a rumen fluke increasingly reported in European livestock, has emerged as a relevant parasitic threat in cattle. This study investigated the prevalence and seasonal dynamics of gastrointestinal endoparasites in 382 fecal samples from 40 beef cattle farms (26 extensive and 14 semi-extensive) in central Spain. Samples were analyzed using flotation, sedimentation, and modified McMaster techniques, complemented by PCR confirmation of trematodes and a 25-variable epidemiological survey. C. daubneyi was detected in 38.74% of samples and 77.5% of farms, surpassing Fasciola hepatica (13.09%), gastrointestinal nematodes (42.15%), and Eimeria spp. (16.75%). Mixed infections were frequent. Seasonal shedding patterns varied by parasite, with C. daubneyi peaking in spring and winter. Statistical analyses (Kruskal–Wallis, ANOVA, Mann–Whitney U) revealed significant seasonal differences and confirmed higher F. hepatica egg counts in extensive systems (p = 0.0012). Anthelmintic treatment was infrequent and mainly guided by coprological diagnosis; ivermectin, closantel, albendazole, and nitroxinil were the most used drugs, though none fully effective against C. daubneyi. Anthelmintic resistance was not evaluated in this study. These findings confirm the emergence of C. daubneyi in central Spain and highlight the need for targeted surveillance and seasonally adjusted control strategies. Full article

Coccidiosis represents a major constraint to sheep productivity worldwide, with increasing concerns regarding anticoccidial resistance and growing interest in reducing dependency on conventional synthetic anticoccidials. This investigation evaluated the anticoccidial properties of faveira pods (Parkia platycephala pod—PpP) and their influence on productive performance in naturally infected lambs. Eighteen uncastrated Dorper × Santa Inês crossbred males (20.0 ± 2.5 kg, 5 months) were randomly allocated to three groups: G1 (0% PpP; n = 6), G2 (100% PpP replacing roughage, 30.0% of total diet; n = 6), and the control group (0% PpP plus 20 mg/kg toltrazuril; n = 5). Parasitological assessments, productive performance, and behavioral parameters were monitored over 45 days using oocyst counts, morphometric analysis, digestibility trials, and biometric measurements. Nine Eimeria species were identified, with E. crandallis, E. parva, and E. bakuensis representing 53.5% of total oocyst shedding. Group G2 demonstrated a numerical 8.5% reduction in parasite load compared to G1 (p = 0.42), while toltrazuril achieved 36.6% efficacy (p < 0.05). Species-specific effects were significant for E. crandallis, E. parva, and E. ovinoidalis (p < 0.01). A robust correlation emerged between parasite load and water consumption (r = 0.652, p = 0.0045), establishing a novel behavioral biomarker for coccidiosis monitoring. Environmental oocyst elimination decreased by 43.4% in the P. platycephala group. These findings demonstrate that PpPs possess moderate anticoccidial properties, offering a sustainable complementary strategy for integrated coccidiosis management while contributing to environmental sustainability. Full article

Neonatal calf diarrhoea (NCD) is the leading cause of mortality in calves under 30 days old. Although several pathogens are usually involved in outbreaks, most previous research has focused on specific enteropathogens or on the four agents traditionally associated with this syndrome. This study aimed to determine the prevalence of thirteen enteropathogens in 420 diarrhoeic calves under a month of age from north-western Spain and to identify the most frequent co-occurrences. Four diarrhoeagenic pathotypes of Escherichia coli, bovine rotavirus A, coronavirus, norovirus, nebovirus and torovirus were identified using qPCR. Presence of Salmonella spp. was studied using a serum agglutination test. A direct immunofluorescence assay was employed to identify Cryptosporidium and Giardia duodenalis oo/cysts. Eimeria oocysts were found by the floatation technique. Our results confirm the co-occurrence of agents in most cases of NCD. A total of 172 pathogen combinations, involving up to seven agents, were identified. Cases involving one or more viral agents and Cryptosporidium parvum were predominant, maybe because viral immunosuppression facilitates the protozoan life-cycle. The frequent detection of agents typically overlooked in the aetiological diagnosis of NCD suggests that they may play a role in this syndrome and thus should be included in routine diagnostic panels, allowing implementing the most effective control measures. Full article

Few studies have investigated gastrointestinal (GI) and external parasites, as well as environmental fungi, in rabbits using a One Health approach. Between September 2023—May 2024, fecal, hair and skin scraping samples were collected from 72 rabbits that attended clinical consultations and from private owners and breeders in Portugal. Diagnostic techniques included Mini-FLOTAC, direct immunofluorescence antibody, and the analysis of the virulence profile of fur fungi. A total of 58% of the rabbits were positive for GI parasites, namely Eimeria spp. (45%), Cryptosporidium spp. (32%), Trichostrongylus retortaeformis (17%), Passalurus ambiguus (13%), Graphidium strigosum (13%), and Giardia spp. (9%), with only 12% of the infected animals showing clinical signs (diarrhea). In addition, 10% of the animals were positive for Cheyletiella sp. infestations. Environmental fungi of the genera Penicillium, Rhizopus, and Scopulariopsis were isolated from 7% of these animals, with the Scopulariopsis sp. isolate S1 testing positive for proteinase, lecithinase, and gelatinase activities. Frequent sanitization and regular deworming emerged as essential factors to minimize parasitic frequency. This integrated diagnosis procedure proved to be effective in the search for parasitic and fungal agents in rabbit medicine. Further research is needed to improve the knowledge on the transmission and pathogenicity of these agents in rabbits. Full article

Hares (Lepus europaeus and Lepus timidus) play important ecological and economic roles in Kazakhstan; however, data on their parasitic fauna are scarce. This study aimed to assess the diversity, prevalence, and genetic characteristics of endoparasites in wild hare populations from central and northern Kazakhstan. From November 2022 to February 2025, 107 hares (L. europaeus, n = 46; L. timidus, n = 61) were collected in the Akmola and Karaganda regions. Parasitological and coprological analyses were conducted. Genetic and phylogenetic analyses were performed using partial sequences of the mitochondrial cox1 and nad1 genes and a partial 28S rDNA region to assess the genetic diversity and evolutionary relationships of selected parasite genera. Seven parasite taxa were identified: Mosgovoyia pectinata (6.5% in L. europaeus, 11.5% in L. timidus), Cysticercus pisiformis (4.3% in Le, 3.3% in Lt), Coenurus serialis (3.3%, only in Lt), Passalurus ambiguus (6.5% in Le, 4.9% in Lt), Nematodirus leporis (36.6% in Le, 13.4% in Lt), Eimeria spp. (9.1% in Le, 3.8% in Lt), and Trichuris leporis (1.9%, only in Lt). Genetic methods confirmed species identity and revealed phylogenetic relationships. This is the first genetically confirmed survey of endoparasites in hares in Kazakhstan. The results contribute valuable data to regional parasitology and support the need for continued wildlife health monitoring. Full article

Gastrointestinal (GI) parasites not only significantly impact goat health and productivity but can also affect human health due to the zoonotic potential of some species. This study investigates the prevalence of internal parasites within the tropical monsoon ecosystem of southern Thailand, focusing on both phenotypic and molecular characteristics of the parasites and identifying associated risk factors in caprine farming systems. A total of 276 meat goats from Nakhon Si Thammarat province were examined, indicating an overall GI parasite prevalence of 88.8% (245/276), with strongyles and Eimeria spp. identified as the dominant parasites. In addition, mixed parasitic infections were observed in 72.2% of cases, whereas single infections comprised 27.8%. Strongyle-positive fecal samples were cultured and genetically sequenced, revealing the presence of Haemonchus contortus, Trichostrongylus colubriformis, and Oesophagostomum asperum. For associated risk factors, gender and grazing with other herds significantly impacted overall GI parasitic infections, while the gender, breed, and packed cell volume (PCV) affected the strongyle infection. A correlation analysis revealed a substantial relationship between strongyle egg per gram (EPG) counts and clinical parameters, indicating that monitoring animals with low body condition scores (BCS) and high Faffa Malan Chart (FAMACHA) scores could be an effective strategy for controlling strongyle infections. These findings highlight the importance of continued research and effective farm management practices to address strongyle infections in meat goats, improving their health and agricultural productivity in tropical regions. Moreover, the detection of four zoonotic parasites (Giardia spp., H. contortus, T. colubriformis, and Fasciola spp.) indicates the necessity for the routine surveillance and monitoring of zoonotic parasites in goats to mitigate potential human health risks. Full article

Gastrointestinal parasitic diseases pose significant health risks to equine populations. This study investigated the epidemiological patterns of equine gastrointestinal parasites in Xinjiang by analyzing 83 fecal samples collected from Ili (n = 62) and Urumqi (n = 21) between August and November 2024. The modified McMaster technique was employed to quantify fecal egg counts (EPG) and was complemented by morphological identification to assess infection dynamics related to geography, breed specificity, and management practices. The results demonstrated an overall infection prevalence of 66.3% (55/83), with strongyles, Parascaris equorum, and Eimeria oocysts being present. Significant geographical variation was observed, with Ili exhibiting a higher prevalence (74.2%) compared to Urumqi (42.9%). Breed susceptibility analysis revealed that there was a 94.1% prevalence in Yili horses versus 42.9% in Kazakh horses. Pasture-managed herds showed markedly higher infection rates (94.1%) than stable-based systems (50.0%). Parasite community composition was dominated by strongyles (82.1%), followed by Triodontophorus spp. (27.7%) and P. equorum (2.4%). These findings highlight severe parasitic infection risks in Xinjiang’s grazing equids, underscoring the urgency of implementing targeted anthelmintic protocols to mitigate disease transmission. Full article

Objectives: The present study aimed to determine the reference intervals for complete blood count and total protein parameters in Greek indigenous Capra prisca goats and to evaluate their associations with parasitic burden, age and reproductive stage. Methods: Two-hundred clinically health goats were grouped by parasite status (gastrointestinal nematodes, Eimeria spp., and lungworm infection), age (3–6-month-old growing kids; lactating non-pregnant goats ≤ 3 or >3 years old) and reproductive stage (non-lactating pregnant goats; lactating non-pregnant goats). Blood samples were analyzed for erythrogram, leukogram and megakaryocytic parameters using an automated analyzer and manual blood smears. Total plasma proteins were measured using refractometry. Results: Gastrointestinal nematode-infected animals (>300 eggs per gram of feces) were associated with a significant reduction in red blood cell counts and hematocrit estimation, and an increase in mean corpuscular hemoglobin and mean corpuscular hemoglobin concentrations, while lungworm-infected animals were associated with decreased red blood cells, red cell distribution width and neutrophils, and increased lymphocytes compared to non-infected animals. Eimeria spp. affected only basophils in growing kids. Age influenced all erythrocytic and leukocytic parameters (apart from neutrophils and monocytes), as well as all megakaryocytic parameters and total proteins, with younger animals showing higher red and white blood cell counts and platelets compared to adults. Pregnant does had elevated hemoglobin, hematocrit, neutrophils and monocytes compared with lactating non-pregnant does. Conclusions: The calculated 95% reference intervals for our demographic groups of animals provide a useful diagnostic framework for assessing Capra prisca health in Greek goat farming. Full article

Coccidiosis, caused by Eimeria spp., remains a major challenge in poultry production, significantly affecting poultry health and performance, leading to substantial economic losses. While its impact on gut health is well documented, the interplay of Eimeria spp. challenge and/or vaccination with the intestinal microbiota remain insufficiently understood. Therefore, the aim of this study was to investigate the effects of Eimeria spp. (E. acervulina, E. maxima, and E. tenella) challenge, alone or in combination with a commercially available vaccine, on broiler performance, intestinal gross lesions, and cecal microbiota structure and function in experimentally challenged broiler chicks. A total of 216 Ross 308^® broilers were randomly divided into three groups, with six replicates per group, according to the following experimental design: (A) negative control, (B) Eimeria spp.-challenged birds on day 16, and (C) Eimeria spp.-vaccinated and -challenged birds. Performance parameters were recorded on a weekly basis, coccidiosis gross lesions in the intestine were evaluated on days 23 and 29, and microbiota samples were collected on day 23. Broilers in the challenged group exhibited significantly (p ≤ 0.05) increased coccidiosis gross lesions in the intestine at both sampling periods (7 and 19 days post-infection, dpi), whereas vaccination significantly (p ≤ 0.05) minimized the severity of lesions at both time points. The challenged-only group showed significantly (p ≤ 0.05) lower average daily weight gain (ADWG) during the finisher phase and the overall experimental period compared to the vaccinated group. Additionally, average daily feed intake (ADFI) during the post-challenge period (22–29 dpi) was significantly (p ≤ 0.05) reduced in both challenged groups. Alpha diversity decreased in the challenged (p = 0.016) and vaccinated–challenged (p = 0.016) groups compared to control, Accordingly, beta diversity was reduced in groups B and C compared to the control group. This reduction was accompanied by an increased relative abundance of Proteobacteria (18, 71% in Group B and 10, 87% in Group C) and potentially pathogenic genera (Escherichia spp. and Shigella spp. p < 0.05), along with a decline in short-chain fatty acid (SCFA)-producing bacteria (Oscillibacter spp. and Eisenbergiella spp.) in groups B and C, respectively, compared to the control. Predictive functional metagenomics indicated disruptions in amino acid metabolism, nucleotide degradation, and lipid metabolism, potentially affecting gut integrity and nutrient absorption. Additionally, in the vaccinated group, gross lesions in the intestine were reduced in severity and microbial diversity was partially preserved, resulting in a microbiota composition more similar to that of the control group. Overall, these findings support that Eimeria spp. infection alters gut microbiota and function in broiler chicks, underscoring the need for further research into alternative strategies, such as probiotics and phytobiotics, to support gut health and disease resilience in poultry. Full article

Coccidiosis, caused by Eimeria spp., significantly reduces poultry productivity and causes major economic losses. Traditional control methods are limited by drug resistance and high production costs. Recent genomic and bioinformatic advances have enabled the identification of novel antigens, making recombinant subunit vaccines a promising next-generation strategy by eliciting robust cellular and humoral immune responses. This study investigates the E. necatrix gametocyte protein 56 (EnGAM56) as a potential candidate for recombinant subunit vaccines. The full-length E. necatrix gametocyte gam56 gene (Engam56-F) was amplified, expressed in vitro, and characterized via SDS-PAGE and Western blot. Immunofluorescence assays revealed that EnGAM56-F is specifically localized in gametocytes and unsporulated oocysts. Chickens immunized with recombinant proteins (rEnGAM56-F and rEnGAM56-T) were evaluated for immunoprotection against E. necatrix infection through lesion scores, weight gain, oocyst production, anticoccidial index (ACI), and antibody and cytokine levels. The synergistic effects were evaluated by employing various combinations of recombinant proteins, including rEtGAM22, rEtGAM56-T, and rEtGAM59. Results showed that EnGAM56-F encodes a 468-amino acid protein with distinct tyrosine-serine-rich and proline-methionine-rich regions. rEnGAM56-F was specifically recognized by both anti-6 × His tag antibodies and convalescent serum from chickens infected with E. necatrix. Both rEnGAM56-F and rEnGAM56-T provided immune protection, with rEnGAM56-T showing superior efficacy. The combination of rEnGAM (22 + 59 + 56-T) yielded the strongest immune response, followed by rEnGAM (22 + 56-T). These findings highlight the potential of EnGAM56 as a candidate for recombinant subunit anticoccidial vaccines. Full article

Background/Objectives: The use of black soldier fly (BSF) larvae meal in poultry nutrition is gaining attention as a sustainable protein source with a high nutritional value, an efficient bioconversion of organic waste, and potential functional benefits for intestinal health. This study evaluated the dietary effects of including 5% BSF larvae meal on the growth performance, nutrient digestibility, and energy utilization as well as on the intestinal integrity, gene expression, lipid profile, and short-chain fatty acid (SCFA) production of broilers under an intestinal challenge. Methods: Eight hundred one-day-old male broilers were assigned to four dietary treatments with eight replicates (25 birds/pen) and reared until day 40. Birds were fed either a Basal corn–soy diet or a BSF diet (5% BSF larvae meal replacing energy- and protein-yielding ingredients). Diets were provided to a non-challenged group and a challenged group, which was orally gavaged with Eimeria spp. on day 1 and Clostridium perfringens on days 11 and 14. The growth performance was evaluated up to day 40, while the nutrient digestibility, meat lipid profile, intestinal histomorphology, and gene expression were assessed at 21 days. The SCFAs were determined at both 21 and 40 days. Results: It was observed that the intestinal challenge induced dysbiosis and negatively affected growth performance, whereas the BSF meal inclusion partially mitigated these adverse effects. Broilers fed the BSF larvae meal showed increased cecal SCFA concentrations and a lower interleukin-6 gene expression, along with higher lauric and myristic acid levels in breast muscle (p ≤ 0.05). Conclusions: The inclusion of 5% BSF larvae meal improved performance without impairing nutrient digestibility or intestinal histomorphology, while increasing cecal concentrations of butyric and acetic acids and promoting a beneficial lipid deposition. Full article

Gastrointestinal parasites impact the health and productivity of domestic birds and may even be more common in production systems with lower biosafety conditions. In this context, backyard poultry production systems (BPPS), defined as small-scale family production systems, could be more affected. However, information about its epidemiology is limited in the Central Zone of Chile. This study aimed to determine the risk factors and spatial distribution of gastrointestinal parasites in BPPS in Central Chile. Thus, feces samples were collected from 51 backyards and analyzed using copro–parasitological techniques. In parallel, an epidemiological survey was conducted on the farmers, and the data were analyzed by multivariable logistic regression to identify risk factors. Spatial analysis was performed with the detected parasite species to determine high-risk clusters. Eimeria spp. was the most frequently detected parasite (72.5%), followed by Capillaria spp. (50.9%) and Ascaridia galli (49%). Regarding parasitic burden, nearly 90% of BPPS showed low parasitic burden for Eimeria spp. and helminths. In turn, the availability of potable drinking water (95% CI: 0.054–0.905; p = 0.036) and proper ventilation of the pens (95% CI: 0.003–0.429; p = 0.009) reduced the presence of parasites. Spatial high-risk clusters were detected for Eimeria spp. (RR = 2.60; p-value < 0.0001), A. galli (RR = 2.93; p-value = 0.021), and Trichostrongylus spp. (RR = 5.85; p-value = 0.050). Full article