Search Results (21)

Accurate species delimitation is fundamental yet challenging, particularly in recently diverged, phenotypically conservative taxa such as bats. The “Rhinolophus macrotis group” represents one of the most taxonomically contentious groups among horseshoe bats. During field surveys in Southwest China, we discovered an unidentified Rhinolophus sp. occurring sympatrically with R. osgoodi and R. episcopus, sharing broad morphological affinities with recognized species of the “R. macrotis group.” To explore its taxonomic status, we employed an integrative approach combining morphological, acoustic, and multi-locus genetic (mitogenomic and nuclear) data. Phenotypically, Rhinolophus sp. closely resembles R. osgoodi but can be distinguished by its divergent echolocation resting frequency. Genetically, while mitochondrial data deeply nested Rhinolophus sp. within R. osgoodi with a shallow divergence time, phylogenies based on two nuclear introns positioned it closer to two other species, R. episcopus and R. siamensis. Species delimitation based on these genetic markers revealed a pattern of mitochondrial subdivision contrasted by overly conservative nuclear signals. Such mito-nuclear discordance suggests a complex evolutionary history that complicates taxonomic assignments. Given that only three specimens of Rhinolophus sp. were available, which precludes a robust assessment of intraspecific variation, we provisionally designate it as a candidate lineage within the “R. macrotis group,” warranting future validation with additional comprehensive evidence. This study highlights the indispensable utility of integrative taxonomy in uncovering hidden diversity and provides insights into chiropteran evolutionary history. Full article

Transmissible spongiform encephalopathies (TSE) are fatal neurodegenerative diseases caused by the misfolding of proteins generated in the exon 3 region of the prion protein gene (PRNP). Recent investigations using protein misfolding cyclic amplification assays indicated that some canids displayed a low susceptibility to TSE due to a specific nonsynonymous substitution (human: N159D/E; canid: N163D/E; alignment herein: N302D/E) in the prion protein that may confer protection against prion seeding activity and propagation. To examine the molecular evolution underlying this observation, we determined the mammalian taxonomic distribution of the N159D/E substitution in 882 PRNP sequences representing 26 Orders, 132 families, and 686 species. Two families each in Carnivora (Canidae and Mustelidae) and Chiroptera (Mormoopidae and Vespertilionidae), and one family each in Artiodactyla (Moschidae) and Rodentia (Erethrizontidae), possessed N159D/E that has been reported to confer resistance to TSEs. Although no direct evidence linked a pattern of resistance (phylogenetic relatedness, geographic location, etc.) in these diverse species, it may be that coevolutionary pressures led 53 of the examined 686 species (1 domestic species, 52 wild species) to possess N159D/E. Therefore, the presence of N159D/E may not be the only factor in determining sensitivity to prion diseases; consequently, a more detailed investigation into the 53 species, such as knockout experiments, is warranted. Full article

Uganda is home to a rich diversity of bats, which carry high ecological and socioeconomic value through the ecosystem services that they provide. However, critical bat habitats, including caves, are facing increasing anthropogenic pressures, and the types and frequencies of disturbances to cave-roosting bats are not well understood in Uganda. Therefore, we examined the role of anthropogenic disturbances in caves to assess the threats posed to bat populations. We used the Bat Cave Vulnerability Index (BCVI) framework to score 14 caves inhabited by bats within the study region. We included qualitative surveys with human communities to better understand various aspects within the BCVI. All bat species recorded were of the IUCN category “Least Concern”. The BCVI indicated 50% of the caves (with insectivorous and frugivorous bats) require urgent conservation interventions due to high bat diversity and anthropogenic disturbances (e.g., guano collection). Most of the caves studied were highly vulnerable to anthropogenic disturbances, as assessed in the study. All the caves we studied (except two) are outside the protected area, and due to their imputed vulnerabilities, interventions ought to be implemented to balance cave conservation and human use in the Mt. Elgon area. Such interventions should integrate human factors. Full article

Bats (Chiroptera) are among the most diverse and geographically dispersed mammals. They are of great importance to the ecosystem, as pollinators, seed dispersers and pest controllers, in addition to being hosts to several parasitic arthropods, including ticks, mites, lice, fleas and flies. Their diet includes the tissue and blood or other body fluids of bats. Bats are reservoirs of several disease-causing agents, many of them pathogenic to humans, such as bacteria, as well as protozoa, viruses and fungi. This study was conducted in Monte Negro, Rondônia, Brazil and the occurrence of parasitic arthropods in bats was evaluated, as well as a screening of bacteria that these ectoparasites can carry. Through a total of 69 nocturnal captures, 217 chiropterans were sampled, representing 23 species and six families. A total of 592 specimens of parasitic arthropods (ticks, mites and flies) were collected from these bats (9% dipterans, 59% ticks and 32% mites). Bartonella spp. were found in two species of bat flies (Trichobius joblingi and Strebla mirabilis) in peri-urban and forest areas with an infection rate of 62% and 38%, respectively. We report for the first time in Rondônia the argasid tick Ornithodoros hasei and its infection by a spotted fever group bacterium ‘Candidatus Rickettsia wissemanii’ in a peri-urban area. Full article

Morphological modifications are a potential mechanism for functional species and phylogenetic diversification. The sella turcica in mammals is a structure associated with the basisphenoid bone and serves as the receptacle for the pituitary gland; however, little is known about the morphological variation that may affect functionality in chiropterans. In this study, we provide morphological and morphometric evidence of differences between populations of Pteronotus mesoamericanus [the Gulf of Mexico] and P. mexicanus [the Pacific Coast] by describing variations in the dimensions of the dorsum sellae and the processus clinoideus caudalis of the sella turcica. We obtained 20 a priori designed measurements of the dorsum of the sella turcica from 243 skulls of both species from various locations in Mexico. The dorsum sellae were found at an average distance of 3.4 mm from the lower edge of the foramen magnum. The dorsum of the sella turcica has a truncated pyramidal shape, with the processus clinoideus caudalis located at the tip of the pyramid. Ten of the measurements obtained were found to be significant for both regions (the Pacific Coast and the Gulf of Mexico). We propose that these measurements be tested in future studies of populations from the Mormoopidae family in the Antilles, Central America, and South America for comparative purposes, and to help distinguish different lineages and functions. Full article

To date, limited information is available on herpesviruses in bats from the Caribbean region. We report here high detection rates (24.24%, n = 66) of herpesviruses in oral samples from apparently healthy bats (Ardops nichollsi (75%, 9/12) and Molossus molossus (28%, 7/25)) on the Lesser Antillean Island of St. Kitts. Based on analysis of partial DNA polymerase (DPOL) sequences (~225 amino acid (aa) residues), we identified two distinct groups of herpesviruses (BO-I and -II) that were unique to A. nichollsi and M. molossus, respectively. Within the subfamily Betaherpesvirinae, the BO-I DPOL sequences shared low deduced aa identities (<70%) with other herpesviruses, and phylogenetically, they formed a distinct cluster, representing a putative novel betaherpesvirus. The BO-II DPOL sequences were closely related to a putative novel betaherpesvirus from a M. molossus in Lesser Antillean Island of Martinique, indicating possible transmission of herpesviruses by bat movement between the Caribbean Islands. Phylogenetically, the BO-I and -II betaherpesviruses exhibited species-specific (A. nichollsi and M. molossus, respectively) as well as family-specific (Phyllostomidae and Molossidae, respectively) clustering patterns, corroborating the hypothesis on host specificity of betaherpesviruses. Interestingly, a single M. molossus betaherpesvirus strain clustered with the A. nichollsi betaherpesviruses, indicating possible interspecies transmission of herpesviruses between Phyllostomidae and Molossidae. To our knowledge, this is the first report on detection of herpesviruses from Antillean tree bats (A. nichollsi), expanding the host range of betaherpesviruses. Taken together, the present study identified putative novel betaherpesviruses that might be unique to chiropteran species (A. nichollsi and M. molossus), indicating virus–host coevolution, and provided evidence for interspecies transmission of betaherpesviruses between chiropteran families. Full article

Bats are mammals with high biodiversity and wide geographical range. In Brazil, three haematophagous bat species are found. Desmodus rotundus is the most documented due to its role as a primary host of rabies virus in Latin America. Bats are known to harbor various emerging viruses causing severe human diseases. Beyond zoonotic viruses, these animals also harbor a diversity of non-zoonotic viruses. Papillomaviruses are circular double-stranded deoxyribonucleic acid (dsDNA) viruses that infect the epithelial and mucosal cells of many vertebrates, occasionally causing malignant lesions. High-throughput sequencing has enabled papillomaviruses discovery in different bat species. Here, 22 D. rotundus samples were collected through the rabies eradication program in Rio Grande do Sul. The DNA extracted from pooled intestines was amplified by the rolling-circle amplification (RCA) method and sequenced using the Illumina^® MiSeq platform (San Diego, CA, USA).Analysis revealed three contigs corresponding to the Papillomaviridae family, representing three novel viruses named DrPV-1, DrPV-2, and DrPV-3. Phylogenetic analysis suggests DrPV-1 may constitute a new species within the Dyophipapillomavirus genus, while DrPV-2 and DrPV-3 may represent different types within the same species from a novel genus. This is the first description of a papillomavirus in the D. rotundus species, contributing to the characterization of PVs in the Chiropteran order. Full article

The present study contributes to the morphogenesis of the Miresii Cave, located in Cheia Mare of Dâmbovița in the area of the Bran—Dragoslavele Corridor, an important tourist axis in Romania. The main aim of the research is the proposal to the Scientific Council of Piatra Craiului National Park to bring to the attention of the national decision-making commissions that the cave be declared a natural monument. The inventory of this speleological geomorphosite suggested its inclusion in a thematic geotouristic circuit integrated into national and EU-protected natural areas. The novelty of the present research lies in the fact that the cave has never been studied before, being difficult to access. This cave, spatially found in the strict protection zone of the national park, is not included in its management plan. When being integrated into other nature protection areas, it is necessary to exclude any form of recreational tourism so that the cave can be exploited as a geotouristic resource strictly for research and educational purposes. The morphogenetic analysis of the cave, based on the information synthesized from geomorphological and geological literature, allowed us to decipher the morphological individualization of Miresii Cave in the local and regional geocronomorphological context, in accordance with the chronological separation of the karstification phenomenon manifested first in phreatic and later in vadose karst. The diversified typology of speleothems has been rendered according to the geomorphologic generating processes. The identification of the Rhinolophus ferrumequinum chiropteran colony and observations of its biotope highlighted the ecological significance of the cave. The inventory of the individuals of the colony led to the conclusion that the cave harbors one of the first two largest bat communities of this species in the national park and the adjacent depressional corridor. The present study may allow the documentation of the photographs and description of the geomorphosite integrated into the proposed thematic circuit to be included on billboards and in promotional brochures. Thus, it could also be useful for the decision-making authorities of Rucar and Podu Dâmboviței villages, which are interested in making decisions related to the promotion of geotourism, especially due to the existence of numerous geological and geomorphological tourist resources in the administrative territories. Full article

The implantation of the embryo into the maternal endometrium is a complex process associated with the evolution of viviparity and placentation in mammals. In this review, we provide an overview of maternal recognition of pregnancy signals and implantation modes in eutherians, focusing on their diverse mechanisms and evolutionary patterns. Different pregnancy recognition signals and implantation modes have evolved in eutherian mammals, reflecting the remarkable diversity of specializations in mammals following the evolution of viviparity. Superficial implantation is the ancestral implantation mode in Eutheria and its major clades. The other modes, secondary, partially, and primary interstitial implantation have each independently evolved multiple times in the evolutionary history of eutherians. Although significant progress has been made in understanding pregnancy recognition signals and implantation modes, there is still much to uncover. Rodents and chiropterans (especially Phyllostomidae) offer valuable opportunities for studying the transitions among implantation modes, but data is still scarce for these diverse orders. Further research should focus on unstudied taxa so we can establish robust patterns of evolutionary changes in pregnancy recognition signaling and implantation modes. Full article

Woodland bat assemblages are usually structured in a space according to the distance from the ground, water, and obstacles, features that often define chiropteran hunting tactics. Consequently, the bat species composition differs strongly among various habitats, even within the same forest patch. However, when conducting local bat surveys in Wolin National Park (WPN), we revealed an unexpected uniformity in the qualitative and quantitative structure of bat assemblages, based on mist netting and ultrasound recording. In total, 10 vespertilionid species were detected. Across all methods and sampled habitats, a single species, Pipistrellus pygmaeus, predominated, while no Barbastella barbastellus, an old forest specialist, were detected, despite the abundance of their preferred daily roosts. We also reviewed the literature for mist-netted bat samples in four different habitats in lowland Polish forests. The samples usually clustered based on habitats, and the same habitat classes often clustered very closely despite representing geographically distant forests. The exception was WPN, where all four habitat classes formed a tightly packed cluster. We hypothesize that P. pygmaeus might act as a hyperabundant native species, a successful generalist that reduces the contribution of more specialized taxa in the assemblage. It probably benefits from both forest renaturation and anthropogenic cross-boundary subsidy. Full article

Chiroptera are one of the most diverse mammal orders. They are considered reservoirs of main human pathogens, where coronaviruses (CoVs) and paramyxoviruses (PMVs) may be highlighted. Moreover, the growing number of publications on CoVs and PMVs in wildlife reinforces the scientific community’s interest in eco-vigilance, especially because of the emergence of important human pathogens such as the SARS-CoV-2 and Nipha viruses. Considering that Brazil presents continental dimensions, is biologically rich containing one of the most diverse continental biotas and presents a rich biodiversity of animals classified in the order Chiroptera, the mapping of CoV and PMV genetics related to human pathogens is important and the aim of the present work. CoVs can be classified into four genera: Alphacoronavirus, Betacoronavirus, Deltacoronavirus and Gammacoronavirus. Delta- and gammacoronaviruses infect mainly birds, while alpha- and betacoronaviruses contain important animal and human pathogens. Almost 60% of alpha- and betacoronaviruses are related to bats, which are considered natural hosts of these viral genera members. The studies on CoV presence in bats from Brazil have mainly assayed phyllostomid, molossid and vespertilionid bats in the South, Southeast and North territories. Despite Brazil not hosting rhinophilid or pteropodid bats, which are natural reservoirs of SARS-related CoVs and henipaviruses, respectively, CoVs and PMVs reported in Brazilian bats are genetically closely related to some human pathogens. Most works performed with Brazilian bats reported alpha-CoVs that were closely related to other bat-CoVs, despite a few reports of beta-CoVs grouped in the Merbecovirus and Embecovirus subgenera. The family Paramyxoviridae includes four subfamilies (Avulavirinae, Metaparamyxovirinae, Orthoparamyxovirinae and Rubulavirinae), and bats are significant drivers of PMV cross-species viral transmission. Additionally, the studies that have evaluated PMV presence in Brazilian bats have mainly found sequences classified in the Jeilongvirus and Morbillivirus genera that belong to the Orthoparamyxovirinae subfamily. Despite the increasing amount of research on Brazilian bats, studies analyzing these samples are still scarce. When surveying the representativeness of the CoVs and PMVs found and the available genomic sequences, it can be perceived that there may be gaps in the knowledge. The continuous monitoring of viral sequences that are closely related to human pathogens may be helpful in mapping and predicting future hotspots in the emergence of zoonotic agents. Full article

Rabies is one of the most significant public and veterinary health problems, causing approximately 59,000 human deaths annually in the developing countries of Asia and Africa. The aetiologic agent, a viral species of the Lyssavirus genus, is highly neurotropic and has a wide host range, including terrestrial mammals and several Chiropteran species. The Lyssavirus mokola (MOKV) was first isolated in the late 1960s from organ pools of shrews (Crocidura flavescens manni) in the Mokola forest (Nigeria). To date, at least 30 MOKV isolations have been confirmed, all exclusively from Africa, with 73% from southern Africa. There is limited knowledge about the epidemiology of MOKV, and the reservoir host species is unknown. Here, we report on the molecular characterization of rabies viruses originating from both domestic and African wild cats. A partial region of the lyssavirus genome, encoding the nucleoprotein, was amplified and sequenced. Nucleotide sequence analysis demonstrated that 98% of cats were infected with both the canid and mongoose rabies virus variants, as well as a rare lyssavirus, Lyssavirus mokola, from a domestic cat from Eswatini. Furthermore, the nucleotide sequence divergence between the recently identified MOKV isolate and the historical Lyssavirus mokola isolates ranged from 6.8% to 8.3%. This study further highlights the association between the potential host species of Lyssavirus mokola and the domestic cat as an incidental host, and the important role cats may play in rabies transmission dynamics in the country. Therefore, continuous vaccination of domestic cats against rabies is crucial, even after the elimination of dog-mediated rabies, as spillover related to sylvatic rabies cycles is likely to occur. Full article

Ecological and experimental infection studies have identified Egyptian rousette bats (ERBs; Rousettus aegyptiacus: family Pteropodidae) as a reservoir host for the zoonotic rubula-like paramyxovirus Sosuga virus (SOSV). A serial sacrifice study of colony-bred ERBs inoculated with wild-type, recombinant SOSV identified small intestines and salivary gland as major sites of viral replication. In the current study, archived formalin-fixed paraffin-embedded (FFPE) tissues from the serial sacrifice study were analyzed in depth—histologically and immunohistochemically, for SOSV, mononuclear phagocytes and T cells. Histopathologic lesion scores increased over time and viral antigen persisted in a subset of tissues, indicating ongoing host responses and underscoring the possibility of chronic infection. Despite the presence of SOSV NP antigen and villus ulcerations in the small intestines, there were only mild increases in mononuclear phagocytes and T cells, a host response aligned with disease tolerance. In contrast, there was a statistically significant, robust and targeted mononuclear phagocyte cell responses in the salivary glands at 21 DPI, where viral antigen was sparse. These findings may have broader implications for chiropteran–paramyxovirus interactions, as bats are hypothesized to be the ancestral hosts of this diverse virus family and for ERB immunology in general, as this species is also the reservoir host for the marburgviruses Marburg virus (MARV) and Ravn virus (RAVV) (family Filoviridae). Full article

Alphaviruses (Togaviridae) are arthropod-borne viruses responsible for several emerging diseases, maintained in nature through transmission between hematophagous arthropod vectors and susceptible vertebrate hosts. Although bats harbor many species of viruses, their role as reservoir hosts in emergent zoonoses has been verified only in a few cases. With bats being the second most diverse order of mammals, their implication in arbovirus infections needs to be elucidated. Reports on arbovirus infections in bats are scarce, especially in South American indigenous species. In this work, we report the genomic detection and identification of two different alphaviruses in oral swabs from bats captured in Northern Uruguay. Phylogenetic analysis identified Río Negro virus (RNV) in two different species: Tadarida brasiliensis (n = 6) and Myotis spp. (n = 1) and eastern equine encephalitis virus (EEEV) in Myotis spp. (n = 2). Previous studies of our group identified RNV and EEEV in mosquitoes and horse serology, suggesting that they may be circulating in enzootic cycles in our country. Our findings reveal that bats can be infected by these arboviruses and that chiropterans could participate in the viral natural cycle as virus amplifiers or dead-end hosts. Further studies are warranted to elucidate the role of these mammals in the biological cycle of these alphaviruses in Uruguay. Full article

The SARS-CoV-2 coronavirus is the focus of attention as it has caused more than three million human deaths globally. This and other coronaviruses, such as MERS-CoV, have been suggested to be related to coronaviruses that are hosted in bats. This work shows, through a bibliographic review, the frequency of detection of coronavirus in bats species of the Americas. The presence of coronavirus in bats has been examined in 25 investigations in 11 countries of the Americas between 2007 and 2020. Coronaviruses have been explored in 9371 individuals from 160 species of bats, and 187 coronavirus sequences have been deposited in GenBank distributed in 43 species of bats. While 91% of the coronaviruses sequences identified infect a single species of bat, the remainder show a change of host, dominating the intragenera change. So far, only Mex-CoV-6 is related to MERS-CoV, a coronavirus pathogenic for humans, so further coronavirus research effort in yet unexplored bat species is warranted. Full article