Molecular Characterization of Lyssaviruses Originating from Domestic and Wild Cats Provides an Insight on the Diversity of Lyssaviruses and a Risk of Rabies Transmission to Other Susceptible Mammals and Humans in South Africa
Abstract
:1. Introduction
2. Materials and Methods
2.1. Viruses
2.2. Total RNA Extraction, RT-PCR, and Sequencing
2.3. Phylogenetic Analysis
3. Results
4. Discussion
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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MOKV Isolate | 14/024 | 12/604 | 12/458 | U22843 | RA133/82 | 226/08 | 21846 | 13270 | 252/97 | 12574 | 12341 | 700/70 | 543/95 | 322/96 | 229/97 | 173/06 | 112/96 | 071/98 | 86101RCA | 8720SA | 86100CAM |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
14/024 | |||||||||||||||||||||
12/604 | 0.002 | ||||||||||||||||||||
12/458 | 0.003 | 0.001 | |||||||||||||||||||
U22843 | 0.072 | 0.073 | 0.075 | ||||||||||||||||||
RA133/82 | 0.071 | 0.072 | 0.073 | 0.068 | |||||||||||||||||
226/08 | 0.037 | 0.035 | 0.037 | 0.069 | 0.074 | ||||||||||||||||
21846 | 0.063 | 0.063 | 0.064 | 0.057 | 0.068 | 0.06 | |||||||||||||||
13270 | 0.072 | 0.073 | 0.075 | 0 | 0.068 | 0.069 | 0.057 | ||||||||||||||
252/97 | 0.012 | 0.011 | 0.012 | 0.072 | 0.068 | 0.035 | 0.06 | 0.072 | |||||||||||||
12574 | 0.075 | 0.076 | 0.077 | 0.002 | 0.068 | 0.072 | 0.059 | 0.002 | 0.075 | ||||||||||||
12341 | 0.072 | 0.073 | 0.075 | 0 | 0.068 | 0.069 | 0.057 | 0 | 0.072 | 0.002 | |||||||||||
700/70 | 0.021 | 0.02 | 0.021 | 0.069 | 0.072 | 0.022 | 0.057 | 0.069 | 0.017 | 0.072 | 0.069 | ||||||||||
543/95 | 0.033 | 0.032 | 0.033 | 0.067 | 0.071 | 0.009 | 0.059 | 0.067 | 0.031 | 0.069 | 0.067 | 0.017 | |||||||||
322/96 | 0.035 | 0.034 | 0.035 | 0.065 | 0.071 | 0.011 | 0.059 | 0.065 | 0.033 | 0.067 | 0.065 | 0.019 | 0.002 | ||||||||
229/97 | 0.012 | 0.011 | 0.012 | 0.072 | 0.068 | 0.035 | 0.06 | 0.072 | 0 | 0.075 | 0.072 | 0.017 | 0.031 | 0.033 | |||||||
173/06 | 0.034 | 0.033 | 0.034 | 0.066 | 0.069 | 0.01 | 0.061 | 0.066 | 0.03 | 0.068 | 0.066 | 0.018 | 0.003 | 0.005 | 0.03 | ||||||
112/96 | 0.034 | 0.033 | 0.034 | 0.068 | 0.072 | 0.01 | 0.061 | 0.068 | 0.032 | 0.071 | 0.068 | 0.018 | 0.001 | 0.003 | 0.032 | 0.004 | |||||
071/98 | 0.009 | 0.007 | 0.008 | 0.068 | 0.069 | 0.032 | 0.058 | 0.068 | 0.004 | 0.071 | 0.068 | 0.014 | 0.029 | 0.031 | 0.004 | 0.03 | 0.03 | ||||
86101RCA | 0.079 | 0.078 | 0.077 | 0.068 | 0.078 | 0.075 | 0.072 | 0.068 | 0.074 | 0.071 | 0.068 | 0.077 | 0.073 | 0.073 | 0.074 | 0.074 | 0.074 | 0.074 | |||
8720SA | 0.021 | 0.02 | 0.021 | 0.069 | 0.072 | 0.022 | 0.057 | 0.069 | 0.017 | 0.072 | 0.069 | 0 | 0.017 | 0.019 | 0.017 | 0.018 | 0.018 | 0.014 | 0.077 | ||
86100CAM | 0.071 | 0.072 | 0.073 | 0.068 | 0 | 0.074 | 0.068 | 0.068 | 0.068 | 0.068 | 0.068 | 0.072 | 0.071 | 0.071 | 0.068 | 0.069 | 0.072 | 0.069 | 0.078 | 0.072 | |
467/11 | 0.073 | 0.071 | 0.073 | 0.08 | 0.075 | 0.079 | 0.077 | 0.08 | 0.072 | 0.082 | 0.08 | 0.068 | 0.072 | 0.072 | 0.072 | 0.073 | 0.071 | 0.07 | 0.083 | 0.068 | 0.075 |
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Tsie, K.; Ngoepe, E.; Phahladira, B.; Khumalo, N.; Sabeta, C. Molecular Characterization of Lyssaviruses Originating from Domestic and Wild Cats Provides an Insight on the Diversity of Lyssaviruses and a Risk of Rabies Transmission to Other Susceptible Mammals and Humans in South Africa. Pathogens 2023, 12, 1212. https://doi.org/10.3390/pathogens12101212
Tsie K, Ngoepe E, Phahladira B, Khumalo N, Sabeta C. Molecular Characterization of Lyssaviruses Originating from Domestic and Wild Cats Provides an Insight on the Diversity of Lyssaviruses and a Risk of Rabies Transmission to Other Susceptible Mammals and Humans in South Africa. Pathogens. 2023; 12(10):1212. https://doi.org/10.3390/pathogens12101212
Chicago/Turabian StyleTsie, Kefentse, Ernest Ngoepe, Baby Phahladira, Nelisiwe Khumalo, and Claude Sabeta. 2023. "Molecular Characterization of Lyssaviruses Originating from Domestic and Wild Cats Provides an Insight on the Diversity of Lyssaviruses and a Risk of Rabies Transmission to Other Susceptible Mammals and Humans in South Africa" Pathogens 12, no. 10: 1212. https://doi.org/10.3390/pathogens12101212